BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00003385
         (3513 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU36395.1| hypothetical protein MIMGU_mgv1a000784mg [Mimulus...   937   0.0  
emb|CBI19367.3| unnamed protein product [Vitis vinifera]              800   0.0  
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l...   784   0.0  
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l...   784   0.0  
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l...   784   0.0  
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   780   0.0  
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l...   767   0.0  
ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [T...   732   0.0  
ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prun...   729   0.0  
ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [T...   726   0.0  
ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [T...   726   0.0  
gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Mor...   696   0.0  
ref|XP_002320019.2| FF domain-containing family protein [Populus...   694   0.0  
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A...   683   0.0  
ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-l...   682   0.0  
ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [T...   677   0.0  
ref|XP_002510055.1| protein binding protein, putative [Ricinus c...   672   0.0  
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...   669   0.0  
ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-l...   650   0.0  
ref|XP_007160940.1| hypothetical protein PHAVU_001G029800g [Phas...   649   0.0  

>gb|EYU36395.1| hypothetical protein MIMGU_mgv1a000784mg [Mimulus guttatus]
          Length = 987

 Score =  937 bits (2423), Expect = 0.0
 Identities = 518/853 (60%), Positives = 572/853 (67%), Gaps = 12/853 (1%)
 Frame = -3

Query: 3319 HWTHPVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTPQFHPS---HNXXXXXXXX 3149
            HW HP SG M PQ++AP YPMQFRPA QA QGQ FIP Q+T QFH +    N        
Sbjct: 13   HWQHPQSGPMAPQNYAPSYPMQFRPAGQAPQGQSFIPQQATQQFHTAGQAQNHGMPLGQS 72

Query: 3148 XXXPFSQPMPQFLSRPPQPGHGAPSSYPQPSMPMTSSMAQPQSNAPGQGAPFPSSYTYAP 2969
               PFSQ M QFL RP QP    PSS+PQ +M  TS M QPQ+ A   GAP+ SSYTYAP
Sbjct: 73   QPNPFSQQMQQFLPRPGQP---VPSSFPQSNMQPTSGMPQPQA-ASSHGAPYSSSYTYAP 128

Query: 2968 SSFGLPQTGISMPPQFQPSSQMSTPGGQ-----LWMHSSQGTPVVAPLQQGSLQSFPTTA 2804
            SSFGLPQ+GIS  PQFQPS QMS PGG       W HS Q TP VAPLQQ +   FP +A
Sbjct: 129  SSFGLPQSGISASPQFQPS-QMSMPGGPPTGAPQWFHSGQSTPGVAPLQQPNQPPFPASA 187

Query: 2803 TVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERADASTVWK 2624
            TVPAV+GS   QQ+ASDWQEY+AADGRRYYYNK TKQSSWEKP EL+TPLERADASTVWK
Sbjct: 188  TVPAVSGSSAVQQNASDWQEYEAADGRRYYYNKITKQSSWEKPSELLTPLERADASTVWK 247

Query: 2623 EFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXXXXXXXXG 2444
            EFTT EGRKYYYNKETKQSKWTIPD                   EMN             
Sbjct: 248  EFTTSEGRKYYYNKETKQSKWTIPDELKLARELAEKAASEGPHSEMN------------- 294

Query: 2443 EQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRAVPVMQTA 2264
                 +  +T S T T  ++                          + S P   P+  T+
Sbjct: 295  ----TSSTITTSTTGTSVEAN-----------------PTTTTIAGVTSSP--APIATTS 331

Query: 2263 AASATGVPVGNMVASAPSEAYGISGVPEKLSSARI----SMENPSSQVGLSPTVGASVPD 2096
            +   T V     V  +P E  G SG P  +++       S E PSS V  SP  GAS  D
Sbjct: 332  SFGVTSV--AETVVPSPYEVPGSSGAPVIIANNNTTPLTSTEIPSSHVRASPLGGASFQD 389

Query: 2095 GEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEADWSWDQAM 1916
             EEEKKGTTV GKLNV PVEEK +DDEP +YATKQEAKNAFKALLESANVEADWSWDQAM
Sbjct: 390  TEEEKKGTTVDGKLNVTPVEEKPMDDEPMVYATKQEAKNAFKALLESANVEADWSWDQAM 449

Query: 1915 RAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXXXXXXXXXX 1736
            R I+NDKRYGALKTLGE+KQAFNEYLMQRKK+EAEE+RLRQRKA                
Sbjct: 450  RVIINDKRYGALKTLGERKQAFNEYLMQRKKVEAEERRLRQRKAKEEFMTMLEESEELTS 509

Query: 1735 XTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRNRLEFRQFL 1556
              RWSKAV MFEDDKRFKAV+LE DREDLFRNYLVDL          E RRN+ EFRQFL
Sbjct: 510  SMRWSKAVIMFEDDKRFKAVELESDREDLFRNYLVDLHKKEKAKAQEEQRRNKQEFRQFL 569

Query: 1555 ESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXXXXXXXXXX 1376
            ESCGFIKVDSQWRKVQDLLEDDERCTRLDK+DRLD+FQDYIRDL                
Sbjct: 570  ESCGFIKVDSQWRKVQDLLEDDERCTRLDKLDRLDVFQDYIRDLEKEDDEQKKRQKEQLR 629

Query: 1375 XXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGSTPKDLFED 1196
                KNRD FR+MMEEHIA GTLTA+T+W DYCQ+VKDSE Y AVA NTSGSTPKDLFED
Sbjct: 630  RTERKNRDAFREMMEEHIATGTLTAKTYWRDYCQKVKDSEPYAAVALNTSGSTPKDLFED 689

Query: 1195 VTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDINVQLVYED 1016
            V EEL KKYDEDKA+IKD LK EK+ +AST TF+DFKSS  +S    SISDIN+Q    D
Sbjct: 690  VAEELVKKYDEDKARIKDALKHEKVTIASTTTFDDFKSSIEESIGSPSISDINLQ----D 745

Query: 1015 LIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEYRSMGEENL 836
            LID                 KDFTDKLS+IKEINVLSTWEECK LVE+ SEYRS+G+E+ 
Sbjct: 746  LIDRAKDKEEKEAKKLKRLAKDFTDKLSTIKEINVLSTWEECKHLVEDSSEYRSVGDESS 805

Query: 835  CREVFDEYISRLQ 797
            C+E+FDEYISRLQ
Sbjct: 806  CKEIFDEYISRLQ 818



 Score = 68.2 bits (165), Expect = 3e-08
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -3

Query: 442  RHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            RHGSDRKKSRKH  SPESD E RHK+H+R++RDGS+R G
Sbjct: 932  RHGSDRKKSRKHANSPESDGEGRHKRHRRDHRDGSRRIG 970


>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  800 bits (2066), Expect = 0.0
 Identities = 442/862 (51%), Positives = 536/862 (62%), Gaps = 25/862 (2%)
 Frame = -3

Query: 3307 PVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTPQFHP------SHNXXXXXXXXX 3146
            P  G+M PQ+F PP  MQFRPA   QQG  FIP  S  QF P      S N         
Sbjct: 16   PAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPAASQ-QFRPIGQNISSPNVGGPSGQNQ 74

Query: 3145 XXPFSQPMPQFLSRPPQPGHGAPSSYPQP------SMPMTSSMAQPQSNAP--------- 3011
               FSQ M Q   RP QPG  APSS P P      + P+TSS  QP   AP         
Sbjct: 75   PPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQPNQTAPPLNSHMPGL 134

Query: 3010 -GQGAPFPSSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP-GGQLWMHS-SQGTPVVAPL 2840
             G G PF SSYT+AP+SFG PQ+ I+   QFQP SQM  P GGQ W+ S SQ   +V P+
Sbjct: 135  AGPGMPFSSSYTFAPASFGQPQSTINASAQFQPISQMHAPVGGQPWLSSGSQSGALVTPV 194

Query: 2839 QQGSLQSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMT 2660
             Q   Q    TA +PA N      QS+SDWQE+ +ADGRRYYYNK T+ SSWEKPLELMT
Sbjct: 195  HQAGQQP-SVTADIPAGNVPNPTHQSSSDWQEHTSADGRRYYYNKKTRLSSWEKPLELMT 253

Query: 2659 PLERADASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNX 2480
            P+ERADASTVWKEFTT EGRKYYYNK TKQSKWTIP+                ++ EM  
Sbjct: 254  PIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKSVSQETQSEMGT 313

Query: 2479 XXXXXXXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMA 2300
                         + P+  ++++S+T++ T S                         V+ 
Sbjct: 314  TSNEPAVVAVSLAETPSTASVSVSSTTSSTIS-----GMTSSPVPVTPVVAVVNPPPVVV 368

Query: 2299 SEPRAVPVMQTAAA-SATGVPVGNMVASAPSEAYGISGVPEKLSSARISMENPSSQVGLS 2123
            S   A+P+ Q+A   SA GV   +M    P+   G +GV     +   +       +   
Sbjct: 369  SGTSAIPIAQSAVTTSAVGVQP-SMGTPLPAAVSGSTGVAAAFINPNATSMTSFENLSAD 427

Query: 2122 PTVGASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVE 1943
             T GAS+ D EE KKG  VAGK+NV P+EEKT+DDEP +Y+TK EAKNAFKALLESANVE
Sbjct: 428  ATNGASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKALLESANVE 487

Query: 1942 ADWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXX 1763
            +DW+WDQAM+AI+NDKRYGALKTLGE+KQAFNEYL QRKKIEAEE+R+RQ+KA       
Sbjct: 488  SDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKKAREEFTTM 547

Query: 1762 XXXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRR 1583
                       +WSKAV MF+DD+RFKAV+   DREDLF N++++L          E +R
Sbjct: 548  LEECKELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFENFIMELQKKERTKALEEQKR 607

Query: 1582 NRLEFRQFLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXX 1403
            NR+E+RQFLESC FIKV+SQWRKVQD LEDDERC+RL+KIDRL+IFQ+YIRDL       
Sbjct: 608  NRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEREEEEQ 667

Query: 1402 XXXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSG 1223
                         KNRD FRK+MEEH+AAGTLTA+THW DYC +VKDS  Y AVASNTSG
Sbjct: 668  RKIQKEQLRRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSPYLAVASNTSG 727

Query: 1222 STPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISD 1043
            STPKDLFEDV EEL+K+Y EDKA+IKD +K  K+ +ASTWTF DFK++  D     +ISD
Sbjct: 728  STPKDLFEDVAEELEKQYHEDKARIKDAMKLSKVTIASTWTFGDFKAAILDDVGSPNISD 787

Query: 1042 INVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISE 863
            +N++LV+E+L+D                  DF D L S KEI   S WE+CKPL EE  E
Sbjct: 788  VNLKLVFEELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEITASSNWEDCKPLFEESQE 847

Query: 862  YRSMGEENLCREVFDEYISRLQ 797
            YRS+GEE+  RE+F+EYI+ LQ
Sbjct: 848  YRSIGEESFGREIFEEYIAHLQ 869



 Score = 74.7 bits (182), Expect = 3e-10
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            RRHGSDRKKSRKH Y+PESD+ESRHK+HKRE+ DGS+R+G
Sbjct: 974  RRHGSDRKKSRKHAYTPESDTESRHKRHKREHWDGSRRNG 1013


>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
            tuberosum]
          Length = 864

 Score =  784 bits (2025), Expect = 0.0
 Identities = 454/861 (52%), Positives = 532/861 (61%), Gaps = 24/861 (2%)
 Frame = -3

Query: 3307 PVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQS-TPQFHP---SHNXXXXXXXXXXX 3140
            P  G+  PQ F   +PMQFRPA   QQGQ F P  S +PQ+ P   + N           
Sbjct: 16   PSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPVGQTPNAGMPPGQGQIP 74

Query: 3139 PFSQPMPQFLSRPPQPGHGAPSSYPQPSMPMTSSMAQPQSNAP----------GQGAPFP 2990
             FSQ M QF  RP Q GHG PSS       + SS+ QPQ   P          G G PF 
Sbjct: 75   QFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQSSIPQPQQVNPPLNSHMPGVSGAGNPFS 134

Query: 2989 SSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP----GGQLWMHS-SQGTPVVAPLQQGSL 2825
            SSYT                   Q SSQM  P    GGQ W+ S SQ TPV AP    S 
Sbjct: 135  SSYTV------------------QSSSQMHGPTFPAGGQTWLSSGSQTTPVAAPTPPSSH 176

Query: 2824 QSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERA 2645
            Q    +A  PAV  S  +QQ+ASDWQEY+AADGRRYYYNKNTKQSSWEKPLELMTPLERA
Sbjct: 177  Q---LSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLERA 233

Query: 2644 DASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXX 2465
            DASTVWKEFTT +GRKYYYNKETKQSKWTIPD                 +   +      
Sbjct: 234  DASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSGVQ 293

Query: 2464 XXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRA 2285
                    + P+AV   +S+T + T S                         ++ S   A
Sbjct: 294  VSEAVTPAEQPSAVT-PVSSTPSSTVS-----GVASSPVPVTPAVSDVNTPPLVVSGSSA 347

Query: 2284 VPVMQTAAASATGVPVGNMVASAPSEAYGISGVPEKLSSARISMENPSSQVGLSPTV--- 2114
            +P +  A  S+ GV       S+P+    +SG  E  + A       S    LSP V   
Sbjct: 348  IPSVSLAVTSSAGV-------SSPA----VSGSTESAALANAYQTQMSGIENLSPQVASS 396

Query: 2113 --GASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEA 1940
              GAS  D EE KKG  VAGK+NV P EEK+ D+EPF+YATKQEAKNAFKALLESANVE+
Sbjct: 397  LSGASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALLESANVES 456

Query: 1939 DWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXX 1760
            DW+W+Q MR I+NDKRYGALKTLGE+KQAFNEYLMQRKK EAEE+RLRQRKA        
Sbjct: 457  DWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKML 516

Query: 1759 XXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRN 1580
                     TRWSKAVTMFEDD+RFKAV+ E DREDLFRNYLVDL          EYRRN
Sbjct: 517  EESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQEEYRRN 576

Query: 1579 RLEFRQFLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXX 1400
            RLE++QFLE+CGFIKVD+QWRKVQDLLEDDERC+RL+K+DRL+IFQ+YIRDL        
Sbjct: 577  RLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQR 636

Query: 1399 XXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGS 1220
                        KNRD FRKM+EEHIAAG LTA+T W DYCQ VK+  AY+AVASNTSGS
Sbjct: 637  KLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAVASNTSGS 696

Query: 1219 TPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDI 1040
            TPKDLFEDVTEEL+K+Y EDK ++KDV+K EKI ++STWTFEDFK +  +     SI D+
Sbjct: 697  TPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGSPSIHDV 756

Query: 1039 NVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEY 860
            N+QL++EDL++                 KDFTDKLSSIKEI   S+WEE K LVE+ SE+
Sbjct: 757  NLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEF 816

Query: 859  RSMGEENLCREVFDEYISRLQ 797
            R++GEE + R VF+EY++ LQ
Sbjct: 817  RAIGEETISRAVFEEYVAWLQ 837


>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
            tuberosum]
          Length = 872

 Score =  784 bits (2025), Expect = 0.0
 Identities = 454/861 (52%), Positives = 532/861 (61%), Gaps = 24/861 (2%)
 Frame = -3

Query: 3307 PVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQS-TPQFHP---SHNXXXXXXXXXXX 3140
            P  G+  PQ F   +PMQFRPA   QQGQ F P  S +PQ+ P   + N           
Sbjct: 16   PSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPVGQTPNAGMPPGQGQIP 74

Query: 3139 PFSQPMPQFLSRPPQPGHGAPSSYPQPSMPMTSSMAQPQSNAP----------GQGAPFP 2990
             FSQ M QF  RP Q GHG PSS       + SS+ QPQ   P          G G PF 
Sbjct: 75   QFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQSSIPQPQQVNPPLNSHMPGVSGAGNPFS 134

Query: 2989 SSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP----GGQLWMHS-SQGTPVVAPLQQGSL 2825
            SSYT                   Q SSQM  P    GGQ W+ S SQ TPV AP    S 
Sbjct: 135  SSYTV------------------QSSSQMHGPTFPAGGQTWLSSGSQTTPVAAPTPPSSH 176

Query: 2824 QSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERA 2645
            Q    +A  PAV  S  +QQ+ASDWQEY+AADGRRYYYNKNTKQSSWEKPLELMTPLERA
Sbjct: 177  Q---LSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLERA 233

Query: 2644 DASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXX 2465
            DASTVWKEFTT +GRKYYYNKETKQSKWTIPD                 +   +      
Sbjct: 234  DASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSGVQ 293

Query: 2464 XXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRA 2285
                    + P+AV   +S+T + T S                         ++ S   A
Sbjct: 294  VSEAVTPAEQPSAVT-PVSSTPSSTVS-----GVASSPVPVTPAVSDVNTPPLVVSGSSA 347

Query: 2284 VPVMQTAAASATGVPVGNMVASAPSEAYGISGVPEKLSSARISMENPSSQVGLSPTV--- 2114
            +P +  A  S+ GV       S+P+    +SG  E  + A       S    LSP V   
Sbjct: 348  IPSVSLAVTSSAGV-------SSPA----VSGSTESAALANAYQTQMSGIENLSPQVASS 396

Query: 2113 --GASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEA 1940
              GAS  D EE KKG  VAGK+NV P EEK+ D+EPF+YATKQEAKNAFKALLESANVE+
Sbjct: 397  LSGASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALLESANVES 456

Query: 1939 DWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXX 1760
            DW+W+Q MR I+NDKRYGALKTLGE+KQAFNEYLMQRKK EAEE+RLRQRKA        
Sbjct: 457  DWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKML 516

Query: 1759 XXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRN 1580
                     TRWSKAVTMFEDD+RFKAV+ E DREDLFRNYLVDL          EYRRN
Sbjct: 517  EESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQEEYRRN 576

Query: 1579 RLEFRQFLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXX 1400
            RLE++QFLE+CGFIKVD+QWRKVQDLLEDDERC+RL+K+DRL+IFQ+YIRDL        
Sbjct: 577  RLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQR 636

Query: 1399 XXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGS 1220
                        KNRD FRKM+EEHIAAG LTA+T W DYCQ VK+  AY+AVASNTSGS
Sbjct: 637  KLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAVASNTSGS 696

Query: 1219 TPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDI 1040
            TPKDLFEDVTEEL+K+Y EDK ++KDV+K EKI ++STWTFEDFK +  +     SI D+
Sbjct: 697  TPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGSPSIHDV 756

Query: 1039 NVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEY 860
            N+QL++EDL++                 KDFTDKLSSIKEI   S+WEE K LVE+ SE+
Sbjct: 757  NLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEF 816

Query: 859  RSMGEENLCREVFDEYISRLQ 797
            R++GEE + R VF+EY++ LQ
Sbjct: 817  RAIGEETISRAVFEEYVAWLQ 837


>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
            tuberosum]
          Length = 1031

 Score =  784 bits (2025), Expect = 0.0
 Identities = 454/861 (52%), Positives = 532/861 (61%), Gaps = 24/861 (2%)
 Frame = -3

Query: 3307 PVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQS-TPQFHP---SHNXXXXXXXXXXX 3140
            P  G+  PQ F   +PMQFRPA   QQGQ F P  S +PQ+ P   + N           
Sbjct: 16   PSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPVGQTPNAGMPPGQGQIP 74

Query: 3139 PFSQPMPQFLSRPPQPGHGAPSSYPQPSMPMTSSMAQPQSNAP----------GQGAPFP 2990
             FSQ M QF  RP Q GHG PSS       + SS+ QPQ   P          G G PF 
Sbjct: 75   QFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQSSIPQPQQVNPPLNSHMPGVSGAGNPFS 134

Query: 2989 SSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP----GGQLWMHS-SQGTPVVAPLQQGSL 2825
            SSYT                   Q SSQM  P    GGQ W+ S SQ TPV AP    S 
Sbjct: 135  SSYTV------------------QSSSQMHGPTFPAGGQTWLSSGSQTTPVAAPTPPSSH 176

Query: 2824 QSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERA 2645
            Q    +A  PAV  S  +QQ+ASDWQEY+AADGRRYYYNKNTKQSSWEKPLELMTPLERA
Sbjct: 177  Q---LSAVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLERA 233

Query: 2644 DASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXX 2465
            DASTVWKEFTT +GRKYYYNKETKQSKWTIPD                 +   +      
Sbjct: 234  DASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARELAENAAGQVVQTGTSTNSGVQ 293

Query: 2464 XXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRA 2285
                    + P+AV   +S+T + T S                         ++ S   A
Sbjct: 294  VSEAVTPAEQPSAVT-PVSSTPSSTVS-----GVASSPVPVTPAVSDVNTPPLVVSGSSA 347

Query: 2284 VPVMQTAAASATGVPVGNMVASAPSEAYGISGVPEKLSSARISMENPSSQVGLSPTV--- 2114
            +P +  A  S+ GV       S+P+    +SG  E  + A       S    LSP V   
Sbjct: 348  IPSVSLAVTSSAGV-------SSPA----VSGSTESAALANAYQTQMSGIENLSPQVASS 396

Query: 2113 --GASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEA 1940
              GAS  D EE KKG  VAGK+NV P EEK+ D+EPF+YATKQEAKNAFKALLESANVE+
Sbjct: 397  LSGASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALLESANVES 456

Query: 1939 DWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXX 1760
            DW+W+Q MR I+NDKRYGALKTLGE+KQAFNEYLMQRKK EAEE+RLRQRKA        
Sbjct: 457  DWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKML 516

Query: 1759 XXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRN 1580
                     TRWSKAVTMFEDD+RFKAV+ E DREDLFRNYLVDL          EYRRN
Sbjct: 517  EESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQEEYRRN 576

Query: 1579 RLEFRQFLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXX 1400
            RLE++QFLE+CGFIKVD+QWRKVQDLLEDDERC+RL+K+DRL+IFQ+YIRDL        
Sbjct: 577  RLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEKEDEEQR 636

Query: 1399 XXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGS 1220
                        KNRD FRKM+EEHIAAG LTA+T W DYCQ VK+  AY+AVASNTSGS
Sbjct: 637  KLQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTSWRDYCQMVKEFVAYQAVASNTSGS 696

Query: 1219 TPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDI 1040
            TPKDLFEDVTEEL+K+Y EDK ++KDV+K EKI ++STWTFEDFK +  +     SI D+
Sbjct: 697  TPKDLFEDVTEELEKQYHEDKIRVKDVVKSEKITISSTWTFEDFKVAIFEGIGSPSIHDV 756

Query: 1039 NVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEY 860
            N+QL++EDL++                 KDFTDKLSSIKEI   S+WEE K LVE+ SE+
Sbjct: 757  NLQLIFEDLVERAKEKEEKEAKKHQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEF 816

Query: 859  RSMGEENLCREVFDEYISRLQ 797
            R++GEE + R VF+EY++ LQ
Sbjct: 817  RAIGEETISRAVFEEYVAWLQ 837



 Score = 63.5 bits (153), Expect = 6e-07
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 442  RHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            RH SDRKKS+KH +SPESD ESRHK+H+R+ RDGS+R+G
Sbjct: 978  RHSSDRKKSKKHAHSPESDGESRHKRHRRD-RDGSRRNG 1015


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score =  780 bits (2013), Expect = 0.0
 Identities = 436/854 (51%), Positives = 530/854 (62%), Gaps = 17/854 (1%)
 Frame = -3

Query: 3307 PVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTPQFHP------SHNXXXXXXXXX 3146
            P  G+M PQ+F PP  MQFRPA   QQG  FIP  S  QF P      S N         
Sbjct: 30   PAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPAASQ-QFRPIGQNISSPNVGGPSGQNQ 88

Query: 3145 XXPFSQPMPQFLSRPPQPGHGAPSSYPQP------SMPMTSSMAQPQSNAPGQGAPFPSS 2984
               FSQ M Q   RP QPG  APSS P P      + P+TSS  QP   AP   +  P  
Sbjct: 89   PPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQPNQTAPPLNSHMPG- 147

Query: 2983 YTYAPSSFGLPQTGISMPPQFQPSSQMSTP-GGQLWMHS-SQGTPVVAPLQQGSLQSFPT 2810
              +AP+SFG PQ+ I+   QFQP SQM  P GGQ W+ S SQ   +V P+ Q   Q    
Sbjct: 148  -LFAPASFGQPQSTINASAQFQPISQMHAPVGGQPWLSSGSQSGALVTPVHQAGQQP-SV 205

Query: 2809 TATVPAVNGS--GTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERADAS 2636
            TA +P   G+      QS+SDWQE+ +ADGRRYYYNK T+ SSWEKPLELMTP+ERADAS
Sbjct: 206  TADIPVSAGNVPNPTHQSSSDWQEHTSADGRRYYYNKKTRLSSWEKPLELMTPIERADAS 265

Query: 2635 TVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXXXXX 2456
            TVWKEFTT EGRKYYYNK TKQSKWTIP+                ++ EM          
Sbjct: 266  TVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAEKSVSQETQSEMGTTSNEPAVV 325

Query: 2455 XXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRAVPV 2276
                 + P+  ++++S+T++ T S                         V+ S   A+P+
Sbjct: 326  AVSLAETPSTASVSVSSTTSSTIS-----GMTSSPVPVTPVVAVVNPPPVVVSGTSAIPI 380

Query: 2275 MQTAAA-SATGVPVGNMVASAPSEAYGISGVPEKLSSARISMENPSSQVGLSPTVGASVP 2099
             Q+A   SA GV   +M    P+   G +GV   LS+                T GAS+ 
Sbjct: 381  AQSAVTTSAVGVQP-SMGTPLPAAVSGSTGVAANLSA--------------DATNGASMQ 425

Query: 2098 DGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEADWSWDQA 1919
            D EE KKG  VAGK+NV P+EEKT+DDEP +Y+TK EAKNAFKALLESANVE+DW+WDQA
Sbjct: 426  DIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKALLESANVESDWTWDQA 485

Query: 1918 MRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXXXXXXXXX 1739
            M+AI+NDKRYGALKTLGE+KQAFNEYL QRKKIEAEE+R+RQ+KA               
Sbjct: 486  MKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKKAREEFTTMLEECKELT 545

Query: 1738 XXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRNRLEFRQF 1559
               +WSKAV MF+DD+RFKAV+   DREDLF N++++L          E +RNR+E+RQF
Sbjct: 546  SSIKWSKAVDMFQDDERFKAVERSRDREDLFENFIMELQKKERTKALEEQKRNRMEYRQF 605

Query: 1558 LESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXXXXXXXXX 1379
            LESC FIKV+SQWRKVQD LEDDERC+RL+KIDRL+IFQ+YIRDL               
Sbjct: 606  LESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLEREEEEQRKIQKEQL 665

Query: 1378 XXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGSTPKDLFE 1199
                 KNRD FRK+MEEH+AAGTLTA+THW DYC +VKDS  Y AVASNTSGSTPKDLFE
Sbjct: 666  RRAERKNRDEFRKLMEEHVAAGTLTAKTHWRDYCMKVKDSSPYLAVASNTSGSTPKDLFE 725

Query: 1198 DVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDINVQLVYE 1019
            DV EEL+K+Y EDKA+IKD +K  K+ +ASTWTF DFK++  D     +ISD+N++LV+E
Sbjct: 726  DVAEELEKQYHEDKARIKDAMKLSKVTIASTWTFGDFKAAILDDVGSPNISDVNLKLVFE 785

Query: 1018 DLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEYRSMGEEN 839
            +L+D                  DF D L S KEI   S WE+CKPL EE  EYRS+GEE+
Sbjct: 786  ELLDRIKEKEEKEAKKRQRLADDFNDLLRSKKEITASSNWEDCKPLFEESQEYRSIGEES 845

Query: 838  LCREVFDEYISRLQ 797
              RE+F+EYI+ LQ
Sbjct: 846  FGREIFEEYIAHLQ 859



 Score = 74.7 bits (182), Expect = 3e-10
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            RRHGSDRKKSRKH Y+PESD+ESRHK+HKRE+ DGS+R+G
Sbjct: 964  RRHGSDRKKSRKHAYTPESDTESRHKRHKREHWDGSRRNG 1003


>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
            lycopersicum]
          Length = 998

 Score =  767 bits (1981), Expect = 0.0
 Identities = 447/860 (51%), Positives = 529/860 (61%), Gaps = 23/860 (2%)
 Frame = -3

Query: 3307 PVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQS-TPQFHP---SHNXXXXXXXXXXX 3140
            P  G+  PQ F   +PMQFRPA   QQGQ F P  S +PQ+ P   + N           
Sbjct: 16   PSVGSTPPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPVGQTPNAGMPPGQGQIP 74

Query: 3139 PFSQPMPQFLSRPPQPGHGAPSSYPQPSMPMTSSMAQPQSNAP----------GQGAPFP 2990
             FSQ M QF  RP QPGHG PSS         SS++QPQ   P          G G PF 
Sbjct: 75   QFSQTMQQFPPRPGQPGHGTPSSQAIQMSYNQSSISQPQQVNPPLNSHMPGVSGAGNPFS 134

Query: 2989 SSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP----GGQLWMHS-SQGTPVVAPLQQGSL 2825
            SSYT                   Q SSQM  P    GGQ W+ S SQ TPV  P    S 
Sbjct: 135  SSYTV------------------QSSSQMHGPTFPAGGQPWLSSGSQTTPVGDPTPPSSH 176

Query: 2824 QSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERA 2645
            Q     A  PAV  S  +QQ+ASDWQEY+AADGRRYYYNKNTKQSSWEKPLELMTPLERA
Sbjct: 177  QLL---AVAPAVPASTASQQTASDWQEYEAADGRRYYYNKNTKQSSWEKPLELMTPLERA 233

Query: 2644 DASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXX 2465
            DASTVWKEFTT +GRKYYYNKETKQSKWT+PD                 +   +      
Sbjct: 234  DASTVWKEFTTADGRKYYYNKETKQSKWTMPDELKLARELAENVASQVVQTGTSTNSGVQ 293

Query: 2464 XXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRA 2285
                    + P+AV   +S+T + T S                         ++ S   A
Sbjct: 294  VSEAVTSTEQPSAVT-PVSSTPSSTVS-----GVPSSPVPVTPAVSDVNTPPLVVSGSSA 347

Query: 2284 VPVMQTAAASATGVPV----GNMVASAPSEAYGISGVPEKLSSARISMENPSSQVGLSPT 2117
            +P +  A  S+ G+      GN  ++A + AY          +    +EN S QV  S +
Sbjct: 348  IPTVSFAVTSSAGISSPAVSGNTRSAALANAY---------QTQMSGIENLSPQVASSLS 398

Query: 2116 VGASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEAD 1937
             GAS  D EE KKG  VAGK+NV P EEK+ D+EPF+YATKQEAK+AFK+LLESA VE+D
Sbjct: 399  -GASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKHAFKSLLESATVESD 457

Query: 1936 WSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXXX 1757
            W+W+Q MR I+NDKRYGALKTLGE+KQAFNEYLMQRKK EAEE+RLRQRKA         
Sbjct: 458  WTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKEEFTKMLE 517

Query: 1756 XXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRNR 1577
                    TRWSKAVTMFEDD+RFK V+ E DREDLFRNYLVDL          EYRRNR
Sbjct: 518  ESKELTSSTRWSKAVTMFEDDERFKGVEREADREDLFRNYLVDLQKKERSKAQEEYRRNR 577

Query: 1576 LEFRQFLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXXX 1397
            LE++QFLE+CGFIKVD+QWRKVQDLLEDDERC+RL+K+DRLDIFQ+YIRDL         
Sbjct: 578  LEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLDIFQEYIRDLEKEDEEQRK 637

Query: 1396 XXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGST 1217
                       KNRD FRKM+EEHIAAG LTA+T+W DY Q VK+S AY+AVASNTSGST
Sbjct: 638  LQKEQLRRAERKNRDAFRKMIEEHIAAGMLTAKTYWRDYWQMVKESVAYQAVASNTSGST 697

Query: 1216 PKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDIN 1037
            PKDLFEDVTEEL+K+Y EDK  +KDV+K EKI ++ T TFEDFK +  +     SI D+N
Sbjct: 698  PKDLFEDVTEELEKQYHEDKIHVKDVVKSEKITISPTCTFEDFKVAILEGISSPSIQDVN 757

Query: 1036 VQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEYR 857
            +QL++EDL++                 KDFTDKLSSIKEI   S+WEE K LVE+ SE+R
Sbjct: 758  LQLIFEDLVERAKEKEEKEAKKRQRLAKDFTDKLSSIKEITDSSSWEESKELVEDSSEFR 817

Query: 856  SMGEENLCREVFDEYISRLQ 797
            ++GEE + R VF+EY++ LQ
Sbjct: 818  AIGEETISRAVFEEYVAWLQ 837



 Score = 61.2 bits (147), Expect = 3e-06
 Identities = 27/39 (69%), Positives = 35/39 (89%)
 Frame = -3

Query: 442  RHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            RH SDRKKS+KH +SPESD ESRHK+++R+ RDGS+R+G
Sbjct: 945  RHSSDRKKSKKHAHSPESDGESRHKRYRRD-RDGSRRNG 982


>ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
            gi|590596803|ref|XP_007018437.1| Pre-mRNA-processing
            protein 40A isoform 1 [Theobroma cacao]
            gi|508723764|gb|EOY15661.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
            gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score =  732 bits (1890), Expect = 0.0
 Identities = 418/873 (47%), Positives = 507/873 (58%), Gaps = 32/873 (3%)
 Frame = -3

Query: 3319 HWTHPVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTPQFHP-----SHNXXXXXX 3155
            HW  P  G++ PQS+  P   QFRP    QQGQ F+P  S  QF P     S N      
Sbjct: 13   HWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQ-QFRPVGQVPSSNVGMPAV 70

Query: 3154 XXXXXPFSQPMPQFLSRPPQPGHGAPSSYP------QPSMPMTSSMAQPQSNAP------ 3011
                  FSQPM QF  RP QPG  APS+ P      Q + P+TS   Q    AP      
Sbjct: 71   QNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSHQTAPPLNSHM 130

Query: 3010 ----GQGAPFPSSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP----GGQLWMHS-SQGT 2858
                  G P  SSY+Y PSSFG PQ  +S   QFQP+SQ+        GQ W+ S +Q  
Sbjct: 131  PGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQPWLSSGNQSV 190

Query: 2857 PVVAPLQQGSLQSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEK 2678
             +  P+QQ   Q    ++   A N       SASDWQE+ +ADGRRYYYNK T+QSSWEK
Sbjct: 191  SLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYYYNKKTRQSSWEK 250

Query: 2677 PLELMTPLERADASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXAS 2498
            PLELMTP+ERADASTVWKEFTT EGRKYYYNK TKQSKWTIP+                +
Sbjct: 251  PLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQVVASQGA 310

Query: 2497 RPEMNXXXXXXXXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXX 2318
              +                + PAA     SNTS  +                        
Sbjct: 311  PSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVS-----------VTPVAAVAN 359

Query: 2317 XXXVMASEPRAVPVMQTAAASATGVPVGNMVASAPSEAYGISGVPEKLSSARI------S 2156
                + S    VPV Q+AA +A+ V     VA  P  A    G    ++S         S
Sbjct: 360  PSPTLVSGSTVVPVSQSAATNASEVQ-SPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 2155 MENPSSQVGLSPTVGASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNA 1976
            +E+ +SQ  +  T GAS  D EE KKG   AGK+NV PVEEK  DDEP +YA KQEAKNA
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1975 FKALLESANVEADWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLR 1796
            FK+LLESANV++DW+W+Q MR I+NDKRYGALKTLGE+KQAFNEYL QRKK+EAEE+R+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1795 QRKAXXXXXXXXXXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXX 1616
            Q+KA                  RWSKA ++FE+D+RFKAV+   DREDLF NY+V+L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1615 XXXXXXXEYRRNRLEFRQFLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDY 1436
                   E RRN  E+R+FLESC FIK +SQWRKVQD LEDDERC+RL+KIDRL +FQDY
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDY 658

Query: 1435 IRDLXXXXXXXXXXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSE 1256
            I DL                    KNRD FRK+M+EH+  GTLTA+T+W DYC +VKD  
Sbjct: 659  IHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRDYCLKVKDLP 718

Query: 1255 AYEAVASNTSGSTPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSF 1076
             Y AVASNTSGSTPKDLFEDV EEL+K+Y +DK  IKD +K  KI++ STWT EDFK++ 
Sbjct: 719  PYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTWTVEDFKAAI 778

Query: 1075 GDSTVLSSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWE 896
             +      ISDIN++LVYE+L+                   DFT  L + KEI   S WE
Sbjct: 779  SEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSDWE 838

Query: 895  ECKPLVEEISEYRSMGEENLCREVFDEYISRLQ 797
            + +PL EE  EYRS+ EE+L RE+F+EYI+ LQ
Sbjct: 839  DSRPLFEESQEYRSIAEESLRREIFEEYIAYLQ 871



 Score = 74.7 bits (182), Expect = 3e-10
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRS 329
            RRHGSDRKKSRKH +SPESD+ESRHKKHKR++RDGS+R+
Sbjct: 976  RRHGSDRKKSRKHAHSPESDNESRHKKHKRDHRDGSRRN 1014


>ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
            gi|462423966|gb|EMJ28229.1| hypothetical protein
            PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  729 bits (1882), Expect = 0.0
 Identities = 413/873 (47%), Positives = 516/873 (59%), Gaps = 36/873 (4%)
 Frame = -3

Query: 3307 PVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPT-----QSTPQFHPSHNXXXXXXXXXX 3143
            P   ++ PQSF     +Q+RP    QQGQQFI +     Q   Q  PS N          
Sbjct: 16   PPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQSASQQFQPVGQGIPSSNVGMPASQSQQ 75

Query: 3142 XPFSQPMPQFLSRPPQPGHGAPSSYPQP-----SMPMTSSMAQPQSNA----------PG 3008
              FSQPM  +  RP QPGH  PSS   P     + P+TS+ +Q Q  A           G
Sbjct: 76   LQFSQPMQPYPLRPSQPGHATPSSQALPMQYMQTRPITSAPSQSQQPALPFNNQMPGLAG 135

Query: 3007 QGAPFPSSYTYAPSSFGLPQTGISMPPQFQPSSQMS---TPGGQLWMHS-SQGTPVVAPL 2840
             G P+ SSY +AP S+  PQ  +S   QFQP SQ+    +  GQ W+ S +QG  V  P+
Sbjct: 136  GGMPYSSSYIFAPPSYAQPQNNVSSSSQFQPISQVQAHVSVTGQPWVSSGNQGAAVPTPV 195

Query: 2839 QQGSLQSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMT 2660
             Q   Q   TT T  AVN     QQS+SDWQE+ + DGRRYY+N+ TKQSSWEKPLELMT
Sbjct: 196  PQSGQQPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRYYFNRRTKQSSWEKPLELMT 255

Query: 2659 PLERADASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNX 2480
            P+ERADASTVWKE+T+ +G+KYYYNK T++SKWTIP+                +R EMN 
Sbjct: 256  PMERADASTVWKEYTSSDGKKYYYNKVTRESKWTIPEELKLAREQAQRELAQGTRSEMNL 315

Query: 2479 XXXXXXXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMA 2300
                          PPA     +++  TP  S+                          +
Sbjct: 316  TS----------HAPPA-----VASAETPMGSSSVGPSTSSALPGMVSSPVAVIPVSSFS 360

Query: 2299 SEPRAVPVMQTAAASATGVPVGNM--------VASAPSEAYGISGVPEKLSSARI----S 2156
            +     P   + A+ A     G +        V   P+   G +GVP  L +A      +
Sbjct: 361  NPSPIAPTGSSVASGAQSSITGGVGIQPPVVTVTPPPASVSGSTGVPPTLVNAITKSVST 420

Query: 2155 MENPSSQVGLSPTVGASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNA 1976
             EN +SQ   S   GA   D EE K+G  VAGK+NV P EEKTVD+EP +YA+KQEAKNA
Sbjct: 421  FENVTSQDIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEPLVYASKQEAKNA 480

Query: 1975 FKALLESANVEADWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLR 1796
            FKALLESANV +DW+W+Q MR I+NDKRYGALKTLGE+KQAFNEYL QRKK+E EE+R+R
Sbjct: 481  FKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLENEERRMR 540

Query: 1795 QRKAXXXXXXXXXXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXX 1616
            Q+KA                 TRWSKAV+MFE+D+RFKAV+   DREDL+ +Y+V+L   
Sbjct: 541  QKKAREEFSKMLEESKELMSATRWSKAVSMFENDERFKAVERARDREDLYESYIVELERK 600

Query: 1615 XXXXXXXEYRRNRLEFRQFLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDY 1436
                   ++++N  E+R+FLESC FIKV+SQWRKVQD LEDDERC RL+K+DRL IFQDY
Sbjct: 601  EKEKAAEDHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLDRLLIFQDY 660

Query: 1435 IRDLXXXXXXXXXXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSE 1256
            IRDL                    KNRD FRK+MEEH+A GTLTA+T+W DYC +VKD  
Sbjct: 661  IRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTYWRDYCMKVKDLS 720

Query: 1255 AYEAVASNTSGSTPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSF 1076
            +YEAVASNTSGSTPK+LFEDV EEL+K+Y EDKA+IKD +K  K+ +AST TFE+FK + 
Sbjct: 721  SYEAVASNTSGSTPKELFEDVAEELEKQYHEDKARIKDAMKLGKVTLASTLTFEEFKVAI 780

Query: 1075 GDSTVLSSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWE 896
             +     SISDIN +LVYE+L++                  DF   L + KEI   S WE
Sbjct: 781  LEDIGFPSISDINFKLVYEELLERAKEKEEKEAKKRQRLGDDFNKLLHTFKEITASSNWE 840

Query: 895  ECKPLVEEISEYRSMGEENLCREVFDEYISRLQ 797
            +CK L EE  EYRS+GEEN  REVF+EYI+ LQ
Sbjct: 841  DCKHLFEETQEYRSIGEENFSREVFEEYITNLQ 873



 Score = 65.5 bits (158), Expect = 2e-07
 Identities = 29/40 (72%), Positives = 37/40 (92%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            RRH SDRK+SRKH  +PESDSESRH++HKRE++DGS+R+G
Sbjct: 977  RRHSSDRKRSRKH--TPESDSESRHRRHKREHQDGSRRNG 1014


>ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
            gi|508723768|gb|EOY15665.1| Pre-mRNA-processing protein
            40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  726 bits (1874), Expect = 0.0
 Identities = 419/882 (47%), Positives = 508/882 (57%), Gaps = 41/882 (4%)
 Frame = -3

Query: 3319 HWTHPVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTPQFHP-----SHNXXXXXX 3155
            HW  P  G++ PQS+  P   QFRP    QQGQ F+P  S  QF P     S N      
Sbjct: 13   HWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQ-QFRPVGQVPSSNVGMPAV 70

Query: 3154 XXXXXPFSQPMPQFLSRPPQPGHGAPSSYP------QPSMPMTSSMAQPQSNAP------ 3011
                  FSQPM QF  RP QPG  APS+ P      Q + P+TS   Q    AP      
Sbjct: 71   QNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSHQTAPPLNSHM 130

Query: 3010 ----GQGAPFPSSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP----GGQLWMHS-SQGT 2858
                  G P  SSY+Y PSSFG PQ  +S   QFQP+SQ+        GQ W+ S +Q  
Sbjct: 131  PGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQPWLSSGNQSV 190

Query: 2857 PVVAPLQQGSLQSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEK 2678
             +  P+QQ   Q    ++   A N       SASDWQE+ +ADGRRYYYNK T+QSSWEK
Sbjct: 191  SLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYYYNKKTRQSSWEK 250

Query: 2677 PLELMTPLERADASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXAS 2498
            PLELMTP+ERADASTVWKEFTT EGRKYYYNK TKQSKWTIP+                +
Sbjct: 251  PLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQVVASQGA 310

Query: 2497 RPEMNXXXXXXXXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXX 2318
              +                + PAA     SNTS  +                        
Sbjct: 311  PSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVS-----------VTPVAAVAN 359

Query: 2317 XXXVMASEPRAVPVMQTAAASATGVPVGNMVASAPSEAYGISGVPEKLSSARI------S 2156
                + S    VPV Q+AA +A+ V     VA  P  A    G    ++S         S
Sbjct: 360  PSPTLVSGSTVVPVSQSAATNASEVQ-SPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 2155 MENPSSQVGLSPTVGASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNA 1976
            +E+ +SQ  +  T GAS  D EE KKG   AGK+NV PVEEK  DDEP +YA KQEAKNA
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1975 FKALLESANVEADWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLR 1796
            FK+LLESANV++DW+W+Q MR I+NDKRYGALKTLGE+KQAFNEYL QRKK+EAEE+R+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1795 QRKAXXXXXXXXXXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXX 1616
            Q+KA                  RWSKA ++FE+D+RFKAV+   DREDLF NY+V+L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1615 XXXXXXXEYRRNRLEFRQFLESCGFIKV---------DSQWRKVQDLLEDDERCTRLDKI 1463
                   E RRN  E+R+FLESC FIKV         +SQWRKVQD LEDDERC+RL+KI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 1462 DRLDIFQDYIRDLXXXXXXXXXXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGD 1283
            DRL +FQDYI DL                    KNRD FRK+M+EH+  GTLTA+T+W D
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRD 718

Query: 1282 YCQRVKDSEAYEAVASNTSGSTPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTW 1103
            YC +VKD   Y AVASNTSGSTPKDLFEDV EEL+K+Y +DK  IKD +K  KI++ STW
Sbjct: 719  YCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTW 778

Query: 1102 TFEDFKSSFGDSTVLSSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIK 923
            T EDFK++  +      ISDIN++LVYE+L+                   DFT  L + K
Sbjct: 779  TVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYK 838

Query: 922  EINVLSTWEECKPLVEEISEYRSMGEENLCREVFDEYISRLQ 797
            EI   S WE+ +PL EE  EYRS+ EE+L RE+F+EYI+ LQ
Sbjct: 839  EITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEYIAYLQ 880


>ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
            gi|508723766|gb|EOY15663.1| Pre-mRNA-processing protein
            40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  726 bits (1874), Expect = 0.0
 Identities = 419/882 (47%), Positives = 508/882 (57%), Gaps = 41/882 (4%)
 Frame = -3

Query: 3319 HWTHPVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTPQFHP-----SHNXXXXXX 3155
            HW  P  G++ PQS+  P   QFRP    QQGQ F+P  S  QF P     S N      
Sbjct: 13   HWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQ-QFRPVGQVPSSNVGMPAV 70

Query: 3154 XXXXXPFSQPMPQFLSRPPQPGHGAPSSYP------QPSMPMTSSMAQPQSNAP------ 3011
                  FSQPM QF  RP QPG  APS+ P      Q + P+TS   Q    AP      
Sbjct: 71   QNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSHQTAPPLNSHM 130

Query: 3010 ----GQGAPFPSSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP----GGQLWMHS-SQGT 2858
                  G P  SSY+Y PSSFG PQ  +S   QFQP+SQ+        GQ W+ S +Q  
Sbjct: 131  PGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQPWLSSGNQSV 190

Query: 2857 PVVAPLQQGSLQSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEK 2678
             +  P+QQ   Q    ++   A N       SASDWQE+ +ADGRRYYYNK T+QSSWEK
Sbjct: 191  SLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYYYNKKTRQSSWEK 250

Query: 2677 PLELMTPLERADASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXAS 2498
            PLELMTP+ERADASTVWKEFTT EGRKYYYNK TKQSKWTIP+                +
Sbjct: 251  PLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQVVASQGA 310

Query: 2497 RPEMNXXXXXXXXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXX 2318
              +                + PAA     SNTS  +                        
Sbjct: 311  PSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVS-----------VTPVAAVAN 359

Query: 2317 XXXVMASEPRAVPVMQTAAASATGVPVGNMVASAPSEAYGISGVPEKLSSARI------S 2156
                + S    VPV Q+AA +A+ V     VA  P  A    G    ++S         S
Sbjct: 360  PSPTLVSGSTVVPVSQSAATNASEVQ-SPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 2155 MENPSSQVGLSPTVGASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNA 1976
            +E+ +SQ  +  T GAS  D EE KKG   AGK+NV PVEEK  DDEP +YA KQEAKNA
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1975 FKALLESANVEADWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLR 1796
            FK+LLESANV++DW+W+Q MR I+NDKRYGALKTLGE+KQAFNEYL QRKK+EAEE+R+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1795 QRKAXXXXXXXXXXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXX 1616
            Q+KA                  RWSKA ++FE+D+RFKAV+   DREDLF NY+V+L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1615 XXXXXXXEYRRNRLEFRQFLESCGFIKV---------DSQWRKVQDLLEDDERCTRLDKI 1463
                   E RRN  E+R+FLESC FIKV         +SQWRKVQD LEDDERC+RL+KI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 1462 DRLDIFQDYIRDLXXXXXXXXXXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGD 1283
            DRL +FQDYI DL                    KNRD FRK+M+EH+  GTLTA+T+W D
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRD 718

Query: 1282 YCQRVKDSEAYEAVASNTSGSTPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTW 1103
            YC +VKD   Y AVASNTSGSTPKDLFEDV EEL+K+Y +DK  IKD +K  KI++ STW
Sbjct: 719  YCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTW 778

Query: 1102 TFEDFKSSFGDSTVLSSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIK 923
            T EDFK++  +      ISDIN++LVYE+L+                   DFT  L + K
Sbjct: 779  TVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYK 838

Query: 922  EINVLSTWEECKPLVEEISEYRSMGEENLCREVFDEYISRLQ 797
            EI   S WE+ +PL EE  EYRS+ EE+L RE+F+EYI+ LQ
Sbjct: 839  EITASSDWEDSRPLFEESQEYRSIAEESLRREIFEEYIAYLQ 880



 Score = 74.7 bits (182), Expect = 3e-10
 Identities = 32/39 (82%), Positives = 38/39 (97%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRS 329
            RRHGSDRKKSRKH +SPESD+ESRHKKHKR++RDGS+R+
Sbjct: 985  RRHGSDRKKSRKHAHSPESDNESRHKKHKRDHRDGSRRN 1023


>gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
          Length = 994

 Score =  696 bits (1797), Expect = 0.0
 Identities = 404/840 (48%), Positives = 495/840 (58%), Gaps = 28/840 (3%)
 Frame = -3

Query: 3232 QQGQQFIPT----QSTPQFHPSHNXXXXXXXXXXXPFSQPMPQFLSRPPQPGH------G 3083
            Q GQ FIP+    Q   Q  P  N            FSQ M Q+  RP QPGH      G
Sbjct: 5    QHGQPFIPSSQQFQPVGQGIPPPNLGMHPAHSQPVQFSQQMQQYPPRPSQPGHPMPSSQG 64

Query: 3082 APSSYPQ-----PSMPMTSSMAQPQSNA--PGQGAPFPSSYTYAPSSFGLPQTGISMPPQ 2924
             P SY Q     P  P +   A P +N   PG   PF SSY+YAPSSF  PQ   S   Q
Sbjct: 65   LPMSYIQTRPIAPGPPQSQQHAAPFTNQMPPGGAMPFSSSYSYAPSSFVQPQNNASSVSQ 124

Query: 2923 FQPSSQMSTPG----GQLWMHSS-QGTPVVAPLQQGSLQSFPTTATVPAVNGSGTAQQSA 2759
            FQ  SQM  P     GQ W+ S     P VAP QQ        ++   A N   T QQS+
Sbjct: 125  FQQMSQMQAPTAPGPGQPWLSSGIHSAPPVAPGQQVGQPPSAASSADAATNVPSTTQQSS 184

Query: 2758 SDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERADASTVWKEFTTQEGRKYYYNKE 2579
            SDWQE+ ++DGRRYYYNK TKQS W+KP+ELMTP+ERADASTVWKE+++ +GRKYYYNK 
Sbjct: 185  SDWQEHTSSDGRRYYYNKRTKQSVWDKPVELMTPIERADASTVWKEYSSPDGRKYYYNKV 244

Query: 2578 TKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXXXXXXXXGEQPPAAVNLTISNTS 2399
            TKQSKWTIP+                 + E                 P A  +  + +  
Sbjct: 245  TKQSKWTIPEELKLAREQAQKESSQGMQSETGLASHG----------PVAVGSSEMPSAG 294

Query: 2398 TPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMA-SEPRAVPVMQTAAASATGVPVGNMVA 2222
            TP  S                          M  S   A P  Q+A ASA  V    +  
Sbjct: 295  TPVASGAPLVATGVASSPVAVTPVASLPNSSMTISGSSATPGSQSAVASAVAVQPPMVTV 354

Query: 2221 SAPSEAY-GISGVPEKLSSARIS----MENPSSQVGLSPTVGASVPDGEEEKKGTTVAGK 2057
            +  + A  G +GV   L +A  +     +N  SQ   S   GAS+ D EE KKG  VAGK
Sbjct: 355  TPLNPAISGSTGVSPALGNANTTPVRTYDNRVSQDIASSVDGASILDIEEAKKGMAVAGK 414

Query: 2056 LNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEADWSWDQAMRAIVNDKRYGALK 1877
            +NV PVEEK VDDEP ++A KQEAKNAFK+LLESANV++DW+W+QAMR I+NDKRYGALK
Sbjct: 415  INVTPVEEKPVDDEPLVFANKQEAKNAFKSLLESANVQSDWTWEQAMREIINDKRYGALK 474

Query: 1876 TLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXXXXXXXXXXXTRWSKAVTMFED 1697
            TLGE+KQAFNEYL QRKK+EAEE+R+RQ+KA                 TRWSKAV+MFE+
Sbjct: 475  TLGERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTIMLEESKELTSSTRWSKAVSMFEN 534

Query: 1696 DKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRNRLEFRQFLESCGFIKVDSQWR 1517
            D+RFKAV+   DREDLF +Y+V+L          E+RRN  E+R+FLESC FIKV+SQWR
Sbjct: 535  DERFKAVERARDREDLFESYIVELERKEKEKAAEEHRRNAAEYRKFLESCDFIKVNSQWR 594

Query: 1516 KVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXXXXXXXXXXXXXXKNRDTFRKM 1337
            KVQ  LEDDERC RL+K+DRL IFQDYIRDL                    KNRD FRK+
Sbjct: 595  KVQVRLEDDERCLRLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKL 654

Query: 1336 MEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGSTPKDLFEDVTEELDKKYDEDK 1157
            MEEHI A  LTA+T W DYC +VKD   YEAVASNTSGSTPKDLFEDVTEEL+K+Y +DK
Sbjct: 655  MEEHIDAAALTAKTPWRDYCLKVKDLPQYEAVASNTSGSTPKDLFEDVTEELEKQYHDDK 714

Query: 1156 AQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDINVQLVYEDLIDXXXXXXXXXX 977
            A++KD LK  K++  S+WTF+DFK++  +      I +IN++LVYE+L++          
Sbjct: 715  ARVKDTLKLGKVSFESSWTFDDFKAAILEDIGSPPILEINLKLVYEELLERAKEKEEKET 774

Query: 976  XXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEYRSMGEENLCREVFDEYISRLQ 797
                    DFT  L S KEI   S WE+C+ L EE  EYR++GEE++ R++F+EYI+ LQ
Sbjct: 775  KKRQRLADDFTKLLHSKKEITTTSNWEDCRQLFEECQEYRAIGEESVTRDIFEEYITHLQ 834



 Score = 70.5 bits (171), Expect = 5e-09
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSGH 323
            R+H SDRKKSRKH YSPESD ESRHKKH+R++RD  +  GH
Sbjct: 939  RKHSSDRKKSRKHAYSPESDGESRHKKHRRDHRDSRRNGGH 979


>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
            gi|550323102|gb|EEE98334.2| FF domain-containing family
            protein [Populus trichocarpa]
          Length = 1019

 Score =  694 bits (1790), Expect = 0.0
 Identities = 402/864 (46%), Positives = 508/864 (58%), Gaps = 31/864 (3%)
 Frame = -3

Query: 3295 AMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTP-----QFHPSHNXXXXXXXXXXXPFS 3131
            A +PQS       QFRP    QQGQ FI   S       Q  PS +            FS
Sbjct: 2    ASNPQSSGG----QFRPMVPTQQGQPFIQVASQQFRPVGQGMPSSHVGMPAAQSQHLQFS 57

Query: 3130 QPMPQFLSRPPQPGHGAPSS------YPQPSMPMTSSMAQPQSNAPG----------QGA 2999
            QP+ Q    P QPG  APS+      Y Q + P+TSS  QPQ NAP            G 
Sbjct: 58   QPIQQLPPWPNQPG--APSAQALSMPYGQLNRPLTSS--QPQQNAPPLSNHMHVVGTSGV 113

Query: 2998 PFPSSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP----GGQLWMHS-SQGTPVVAPLQQ 2834
            P  S Y +APSSFGL Q   S  PQF P SQM       GGQ W+ S S G  +V P+Q 
Sbjct: 114  PNSSPYAFAPSSFGLTQNSASALPQFPPMSQMHAHVVPMGGQPWLSSGSHGASLVPPVQP 173

Query: 2833 GSLQSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPL 2654
              +Q   ++++   V  S  +QQS SDWQE+ A+DGRRYYYN+ TKQSSW+KP ELMTP+
Sbjct: 174  AVVQPSISSSSDSTVAVSSNSQQSLSDWQEHTASDGRRYYYNRRTKQSSWDKPFELMTPI 233

Query: 2653 ERADASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXX 2474
            ERADASTVWKEFTTQEG+KYYYNK TKQSKW+IP+                ++ E +   
Sbjct: 234  ERADASTVWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMAREQAQQTVGQGNQSETDAA- 292

Query: 2473 XXXXXXXXXGEQPPAAVNLTISNTSTPTKS-TGXXXXXXXXXXXXXXXXXXXXXXXVMAS 2297
                         P AV +T S TST   S +                        V+ S
Sbjct: 293  ----------SNVPTAVAVTSSETSTTAVSVSSSSVMLPGVSSSPISVTAVANPPPVVVS 342

Query: 2296 EPRAVPVMQTAAASATGVPVGNMVASAPSEAYGISGVPEKLSSARI----SMENPSSQVG 2129
               A+PV  +  ASA GV     V   P+     +G P     A+     S++N  SQ  
Sbjct: 343  GSPALPVAHSTTASAVGVQPS--VTPLPTAVSVGTGAPAAAVDAKTTSLSSIDNLLSQSA 400

Query: 2128 LSPTVGASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESAN 1949
             +   GAS+ D  E  K +   GK N +P+EEKT D+EP ++A K EAKNAFKALLESAN
Sbjct: 401  ANSVDGASMMDTAEFNKVSMDMGKTNASPLEEKTPDEEPLVFANKLEAKNAFKALLESAN 460

Query: 1948 VEADWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXX 1769
            V++DW+W+Q MR I+NDKRY ALKTLGE+KQAFNEYL QRKK+EAEE+R+RQ+KA     
Sbjct: 461  VQSDWTWEQTMREIINDKRYAALKTLGERKQAFNEYLGQRKKLEAEERRVRQKKAREEFA 520

Query: 1768 XXXXXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEY 1589
                         +WSKA+++FE+D+R+KA++   DREDLF +Y+VDL          + 
Sbjct: 521  KMLEESKELTSSMKWSKAISLFENDERYKALERARDREDLFDSYIVDLERKEKEKAAEDR 580

Query: 1588 RRNRLEFRQFLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXX 1409
            RRN  E+R+FLESC FIK  SQWRK+QD LEDDERC  L+K+DRL IFQDYIRDL     
Sbjct: 581  RRNVAEYRKFLESCDFIKASSQWRKIQDRLEDDERCLCLEKLDRLLIFQDYIRDLEKEEE 640

Query: 1408 XXXXXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNT 1229
                           KNRD FRK++EEH+A+G+LTA+THW DYC +VKD   Y+AVA+NT
Sbjct: 641  EQKKIQKEQLRRAERKNRDEFRKLLEEHVASGSLTAKTHWLDYCLKVKDLPPYQAVATNT 700

Query: 1228 SGSTPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSI 1049
            SGS PKDLFEDV+EEL+K+Y +DK +IKD +K  KI + STWTFEDFK +  D      I
Sbjct: 701  SGSKPKDLFEDVSEELEKQYHDDKTRIKDAMKLGKITMVSTWTFEDFKGAVADDIGSPPI 760

Query: 1048 SDINVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEI 869
            SDIN++L+YE+L++                  DFT  L ++KE+   S WE+CKPL EE 
Sbjct: 761  SDINLKLLYEELVERAKEKEEKEAKKQQRLADDFTKLLYTLKEVTPSSNWEDCKPLFEES 820

Query: 868  SEYRSMGEENLCREVFDEYISRLQ 797
             EYRS+GEE+L +E+F+EY++ LQ
Sbjct: 821  QEYRSIGEESLSKEIFEEYVTHLQ 844



 Score = 71.2 bits (173), Expect = 3e-09
 Identities = 29/40 (72%), Positives = 37/40 (92%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            R+H SDRKKSRKH Y+PESD ES+HK+HKR++RDGS+R+G
Sbjct: 953  RKHSSDRKKSRKHTYTPESDGESQHKRHKRDHRDGSRRNG 992


>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
            gi|548831471|gb|ERM94279.1| hypothetical protein
            AMTR_s00010p00227470 [Amborella trichopoda]
          Length = 985

 Score =  683 bits (1763), Expect = 0.0
 Identities = 402/871 (46%), Positives = 500/871 (57%), Gaps = 37/871 (4%)
 Frame = -3

Query: 3298 GAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTPQFHP-------SHNXXXXXXXXXXX 3140
            G   PQ++  P  MQFRP    QQ Q FI   S  QF P       S+            
Sbjct: 2    GPGGPQNYGTPMSMQFRPMVPTQQSQPFISAPSQ-QFRPVGQGIPASNIGSPSPVQAQQA 60

Query: 3139 PFSQPMPQFLSRPPQPGHGAPS------SYPQPSMPMTSSMAQ-PQS------NAPGQGA 2999
             ++  M Q   RP Q    APS      SY QP+ PMTS   Q PQ+      + PG G 
Sbjct: 61   QYALGMQQLPPRPAQTAQVAPSPQTVPLSYIQPNRPMTSGPLQIPQNPQHVNIHPPGLGG 120

Query: 2998 P---FPSSYTY-APSSFGLPQTGISMPPQFQPSSQMSTPG------GQLWMHS-SQGTPV 2852
            P     SSYT+ APSS+  PQ  I++  Q+QPSSQM  PG      GQ W+ S SQ T V
Sbjct: 121  PGTVLSSSYTFTAPSSYVHPQNNINISSQYQPSSQMQVPGVPSGSGGQPWLSSGSQSTTV 180

Query: 2851 VAPLQQGSLQSFPTTATVP-AVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKP 2675
            + P+ Q S QS    +T P A        QS+SDWQE+ +ADGRRYYYNK T+QSSWEKP
Sbjct: 181  IPPVVQASQQSSFAASTAPVATPQPNPTSQSSSDWQEHTSADGRRYYYNKKTRQSSWEKP 240

Query: 2674 LELMTPLERADASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASR 2495
            LELMTP+ERADASTVWKEFTT EGRKYYYNK TKQSKWTIPD                + 
Sbjct: 241  LELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPDELKLAREQAEKNGTQLTN 300

Query: 2494 PEMNXXXXXXXXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXX 2315
             E                         +  +STP   T                      
Sbjct: 301  SETTD----------------------VVASSTPVTVT--------------------VP 318

Query: 2314 XXVMASEPRAVPVMQTAAASATGVPVGNM----VASAPSEAYGISGVPEKLSSARISMEN 2147
               M S   A+   Q+A  S +G+    +    V S P+ A   S         ++   +
Sbjct: 319  LTEMPSTVAAISATQSAMPSTSGMATSPVLVTPVVSVPAAAVDPSSAGAAYEKIKVDNVS 378

Query: 2146 PSSQVGLSPTVGASVPDGEEEKKGTTVAGKLNVAPV-EEKTVDDEPFIYATKQEAKNAFK 1970
            P S   ++    A   D EE +K   VAGK+N+ P  +EKTVD+EP ++A+KQEAKNAFK
Sbjct: 379  PESIAQVADETSAQ--DLEEARKAMPVAGKVNITPTSDEKTVDEEPLVFASKQEAKNAFK 436

Query: 1969 ALLESANVEADWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQR 1790
             LL SA+VE+DW+WDQAMR I+NDKRYGALKTLGE+KQAFNEYL QRKK+EAEEKR RQ+
Sbjct: 437  ELLVSAHVESDWTWDQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEEKRTRQK 496

Query: 1789 KAXXXXXXXXXXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXX 1610
            KA                 T+WSKA+TMFEDD+RF+AV+   DRE+LF  +L +L     
Sbjct: 497  KAREDFVKMLEESKELTSATKWSKAITMFEDDERFRAVERGRDREELFEMHLEELHRKER 556

Query: 1609 XXXXXEYRRNRLEFRQFLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIR 1430
                 E+RRN  E+R FLESC FIK  SQWRKVQD LEDDERC RL+KIDRL+IFQ+YIR
Sbjct: 557  AKAQEEHRRNVQEYRAFLESCDFIKASSQWRKVQDRLEDDERCARLEKIDRLEIFQEYIR 616

Query: 1429 DLXXXXXXXXXXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAY 1250
            DL                    KNRD FRK+ME HIAAG LTA+THW +YC +VKD  AY
Sbjct: 617  DLEKEEEEQRKLQKEHLRRAERKNRDDFRKLMEGHIAAGILTAKTHWREYCMKVKDLPAY 676

Query: 1249 EAVASNTSGSTPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGD 1070
             AV+SNTSGSTPKDLFED  EELDK+Y ED+ +IKD +K  +  + STW+FE+FK +  +
Sbjct: 677  LAVSSNTSGSTPKDLFEDTAEELDKQYQEDRTRIKDAVKMARFVMTSTWSFENFKEAISE 736

Query: 1069 STVLSSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEEC 890
               L SIS+ N++LV+++L++                  D  D L SIK+I+  S WEEC
Sbjct: 737  DNNLKSISETNLKLVFDELLERLKEKEEKEAKKRQRMADDLKDLLYSIKDISASSRWEEC 796

Query: 889  KPLVEEISEYRSMGEENLCREVFDEYISRLQ 797
            KPL+EE   YRS+ +E+  R++F+EY++ LQ
Sbjct: 797  KPLLEENQAYRSINDESFARQIFEEYVAYLQ 827


>ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca
            subsp. vesca]
          Length = 990

 Score =  682 bits (1759), Expect = 0.0
 Identities = 398/855 (46%), Positives = 503/855 (58%), Gaps = 23/855 (2%)
 Frame = -3

Query: 3295 AMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTPQFHPSHNXXXXXXXXXXXPFSQPMPQ 3116
            A +PQS A     Q+RP   AQQGQ FI +  + QF P               +SQ M  
Sbjct: 2    ANNPQSSAA----QYRPMVPAQQGQHFI-SPGSQQFQP-------VGQGQPLQYSQQMQP 49

Query: 3115 FLSRPPQPGHGAPSS------YPQP----SMPMTSSMAQPQSNAPGQGAPFPSSYTYAPS 2966
            +  RP QPGH  PSS      Y QP    S+P  S    P  N    G P+PSSY YA  
Sbjct: 50   YPLRPNQPGHAQPSSQALPMPYYQPRPVTSVPPHSQQPAPPFNNQMPGMPYPSSYMYAQP 109

Query: 2965 SFGLPQTGISMPPQFQPSSQMSTPG----GQLWMHSS--QGTPVVAPLQQGSLQSFPTTA 2804
            S+  PQ   +   QFQP SQ    G    GQ WM SS  QG   V P QQ S Q   T  
Sbjct: 110  SYAQPQNNANSSSQFQPMSQDQAHGVPTAGQPWMSSSSHQGA-AVTPQQQPSQQPTSTPF 168

Query: 2803 TVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERADASTVWK 2624
              PAVN    AQ S+SDWQE+ A+DGRRYY+N++T+QSSWEKPLELMTPLERADASTVWK
Sbjct: 169  PDPAVNAPNLAQPSSSDWQEHMASDGRRYYFNRSTRQSSWEKPLELMTPLERADASTVWK 228

Query: 2623 EFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXXXXXXXXG 2444
            E+T+ +G+KYYYNK T++SKWTIP+                ++ EM              
Sbjct: 229  EYTSADGKKYYYNKVTRESKWTIPEELKLAREQAQREHTQGTQSEMTSTS---------- 278

Query: 2443 EQPPAAVNLTI---SNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRAVPVM 2273
              PPA  +  I   +++  P+ S+                          +    A  V 
Sbjct: 279  HAPPATASAEIHAGASSVGPSTSSAQPGTVSSPVAVTPISAFSNPSPTTPSGLSVAPGVQ 338

Query: 2272 QTAAASATGV-PVGNMVASAPSEAYGISGVPEKLSSA--RISMENPSSQVGLSPTVGASV 2102
             + A  + GV P    V+  P+   G +G+P  L +   +   EN + Q   S   GAS 
Sbjct: 339  SSMATGSVGVQPAVVNVSPLPASNVGSTGLPSTLVNTITKSVNENQAPQDSASSIDGASS 398

Query: 2101 PDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEADWSWDQ 1922
             D EE KKG  VAGK+NV P EEK +DDEP +YA+KQEAKNAFK+LLESANV +DW+W+Q
Sbjct: 399  QDIEEAKKGMAVAGKVNVTPSEEKAIDDEPLVYASKQEAKNAFKSLLESANVHSDWTWEQ 458

Query: 1921 AMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXXXXXXXX 1742
            AMR I+NDKRYGAL+TLGE+KQAFNEYL QRKK+E EE+R+RQ++A              
Sbjct: 459  AMREIINDKRYGALRTLGERKQAFNEYLGQRKKLENEERRIRQKRAREEFTKMLEESKEL 518

Query: 1741 XXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRNRLEFRQ 1562
                RWSKAVTMFE+D+RFKAV+   DREDL+ +Y+V+L          E+RRN  E+++
Sbjct: 519  TSTIRWSKAVTMFENDERFKAVERARDREDLYESYIVELERKEKEIAAEEHRRNISEYKE 578

Query: 1561 FLESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXXXXXXXX 1382
            FLESC FIK    WRKVQD LEDDERC RLDK DRL IFQD+IRDL              
Sbjct: 579  FLESCDFIK----WRKVQDRLEDDERCLRLDKFDRLLIFQDHIRDLEKEEEEQKKIQKEQ 634

Query: 1381 XXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSG-STPKDL 1205
                  KNRD FRK++EEH A GTLTA+T W DYC +VKD   YEAVA+NT G STPKDL
Sbjct: 635  LRRIERKNRDEFRKILEEHAADGTLTAKTQWRDYCMKVKDLPQYEAVAANTHGSSTPKDL 694

Query: 1204 FEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDINVQLV 1025
            FEDV E+L+K++ EDKA++KD +KQ +I + S+WTFE+FK++  +     SIS++N++L 
Sbjct: 695  FEDVAEDLEKQFVEDKARVKDAMKQGQITMVSSWTFEEFKAAVVNDIGFPSISELNLKLA 754

Query: 1024 YEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEYRSMGE 845
            YED+++                  DF   L + KEI V S+WE+CK L EE  EYRS+G+
Sbjct: 755  YEDILERAREKEEKEAKKRLRIADDFHKLLHTFKEITVSSSWEDCKQLFEETQEYRSVGD 814

Query: 844  ENLCREVFDEYISRL 800
            E+  RE+F+EYI+ L
Sbjct: 815  EDFGREIFEEYITSL 829



 Score = 68.2 bits (165), Expect = 3e-08
 Identities = 28/39 (71%), Positives = 36/39 (92%)
 Frame = -3

Query: 442  RHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            RH SDRKKSRK  Y+PESDSE+RH++HK+E+RDGS+R+G
Sbjct: 935  RHSSDRKKSRKRAYTPESDSENRHRRHKKEHRDGSRRNG 973


>ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
            gi|508723767|gb|EOY15664.1| Pre-mRNA-processing protein
            40A isoform 4 [Theobroma cacao]
          Length = 844

 Score =  677 bits (1748), Expect = 0.0
 Identities = 395/840 (47%), Positives = 477/840 (56%), Gaps = 41/840 (4%)
 Frame = -3

Query: 3319 HWTHPVSGAMDPQSFAPPYPMQFRPATQAQQGQQFIPTQSTPQFHP-----SHNXXXXXX 3155
            HW  P  G++ PQS+  P   QFRP    QQGQ F+P  S  QF P     S N      
Sbjct: 13   HWP-PAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQ-QFRPVGQVPSSNVGMPAV 70

Query: 3154 XXXXXPFSQPMPQFLSRPPQPGHGAPSSYP------QPSMPMTSSMAQPQSNAP------ 3011
                  FSQPM QF  RP QPG  APS+ P      Q + P+TS   Q    AP      
Sbjct: 71   QNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQSHQTAPPLNSHM 130

Query: 3010 ----GQGAPFPSSYTYAPSSFGLPQTGISMPPQFQPSSQMSTP----GGQLWMHS-SQGT 2858
                  G P  SSY+Y PSSFG PQ  +S   QFQP+SQ+        GQ W+ S +Q  
Sbjct: 131  PGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAGQPWLSSGNQSV 190

Query: 2857 PVVAPLQQGSLQSFPTTATVPAVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEK 2678
             +  P+QQ   Q    ++   A N       SASDWQE+ +ADGRRYYYNK T+QSSWEK
Sbjct: 191  SLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYYYNKKTRQSSWEK 250

Query: 2677 PLELMTPLERADASTVWKEFTTQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXAS 2498
            PLELMTP+ERADASTVWKEFTT EGRKYYYNK TKQSKWTIP+                +
Sbjct: 251  PLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQAQVVASQGA 310

Query: 2497 RPEMNXXXXXXXXXXXXGEQPPAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXX 2318
              +                + PAA     SNTS  +                        
Sbjct: 311  PSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVS-----------VTPVAAVAN 359

Query: 2317 XXXVMASEPRAVPVMQTAAASATGVPVGNMVASAPSEAYGISGVPEKLSSARI------S 2156
                + S    VPV Q+AA +A+ V     VA  P  A    G    ++S         S
Sbjct: 360  PSPTLVSGSTVVPVSQSAATNASEVQ-SPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 2155 MENPSSQVGLSPTVGASVPDGEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNA 1976
            +E+ +SQ  +  T GAS  D EE KKG   AGK+NV PVEEK  DDEP +YA KQEAKNA
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1975 FKALLESANVEADWSWDQAMRAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLR 1796
            FK+LLESANV++DW+W+Q MR I+NDKRYGALKTLGE+KQAFNEYL QRKK+EAEE+R+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1795 QRKAXXXXXXXXXXXXXXXXXTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXX 1616
            Q+KA                  RWSKA ++FE+D+RFKAV+   DREDLF NY+V+L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1615 XXXXXXXEYRRNRLEFRQFLESCGFIKV---------DSQWRKVQDLLEDDERCTRLDKI 1463
                   E RRN  E+R+FLESC FIKV         +SQWRKVQD LEDDERC+RL+KI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 1462 DRLDIFQDYIRDLXXXXXXXXXXXXXXXXXXXXKNRDTFRKMMEEHIAAGTLTARTHWGD 1283
            DRL +FQDYI DL                    KNRD FRK+M+EH+  GTLTA+T+W D
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHVVDGTLTAKTYWRD 718

Query: 1282 YCQRVKDSEAYEAVASNTSGSTPKDLFEDVTEELDKKYDEDKAQIKDVLKQEKIAVASTW 1103
            YC +VKD   Y AVASNTSGSTPKDLFEDV EEL+K+Y +DK  IKD +K  KI++ STW
Sbjct: 719  YCLKVKDLPPYLAVASNTSGSTPKDLFEDVVEELEKQYQQDKTHIKDAMKSGKISMVSTW 778

Query: 1102 TFEDFKSSFGDSTVLSSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXXKDFTDKLSSIK 923
            T EDFK++  +      ISDIN++LVYE+L+                   DFT  L + K
Sbjct: 779  TVEDFKAAISEDVGSLPISDINLKLVYEELLKSAKEKEEKEAKKRQRLADDFTKLLHTYK 838


>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
            gi|223550756|gb|EEF52242.1| protein binding protein,
            putative [Ricinus communis]
          Length = 970

 Score =  672 bits (1735), Expect = 0.0
 Identities = 391/833 (46%), Positives = 490/833 (58%), Gaps = 13/833 (1%)
 Frame = -3

Query: 3256 QFRPATQAQQGQQFIPTQSTP--QFHPSH-NXXXXXXXXXXXPFSQPMPQFLSRPPQPGH 3086
            QFRPA   QQGQ F+P Q  P  Q  PS+              FSQPM Q    P  P H
Sbjct: 11   QFRPA---QQGQPFMPQQFLPVVQGMPSNVGMPMPAGQTQTLQFSQPM-QPPPWPNHPAH 66

Query: 3085 GAPSSYPQPSMPMTSSMAQPQSNAPGQGAPFPSSYTYAPSSFGLPQTGISMPPQFQPSSQ 2906
             APSS P P  P       P ++ P Q     S   +APSS+G  Q       QFQP  Q
Sbjct: 67   VAPSSQPVPLPPYVHQNRPPLTSGPPQLQQTAS--LFAPSSYGQLQNNAISSSQFQPMPQ 124

Query: 2905 MSTP----GGQLWMHS-SQGTPVVAPLQQGSLQSFPTTATVPAVNGSGTAQQSASDWQEY 2741
            M TP    GGQ W+ S S G  V  P+Q    Q   ++++   +N     QQS SDWQE+
Sbjct: 125  MHTPVVPAGGQHWLPSGSNGVAVATPVQPTGQQPSVSSSSDSVLNVPN--QQSLSDWQEH 182

Query: 2740 DAADGRRYYYNKNTKQSSWEKPLELMTPLERADASTVWKEFTTQEGRKYYYNKETKQSKW 2561
             A+DGRRYYYNK TKQSSWEKPLELMTPLERADASTVWKEFTT EG+KYYYNK TKQSKW
Sbjct: 183  TASDGRRYYYNKRTKQSSWEKPLELMTPLERADASTVWKEFTTPEGKKYYYNKITKQSKW 242

Query: 2560 TIPDXXXXXXXXXXXXXXXASRPEMNXXXXXXXXXXXXGEQPPAAVNLT---ISNTSTPT 2390
            ++PD                ++ E +                   VN +   +S T  P 
Sbjct: 243  SMPDELKLAREQAQQTATQGTKSEADAA-----------SHASVTVNASSGEMSTTVIPV 291

Query: 2389 KSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRAVPVMQTAAASATGV-PVGNMVASAP 2213
             S                            S   A+PV Q+  A+A GV P    +   P
Sbjct: 292  GSGFSSTSGVASSPVPVTPVVAVSNPVAAVSSSSALPVAQSIIANAAGVQPPAVTMTVLP 351

Query: 2212 SEAYGISGVPEKLSSARISMENPSSQVGLSPTV-GASVPDGEEEKKGTTVAGKLNVAPVE 2036
            + A G   V  K               G +P+V GAS+ + EE KKG+ V+ K +    E
Sbjct: 352  AAAGGFDNVASK---------------GAAPSVDGASIQNSEEVKKGSGVSIKSDANLTE 396

Query: 2035 EKTVDDEPFIYATKQEAKNAFKALLESANVEADWSWDQAMRAIVNDKRYGALKTLGEKKQ 1856
            EK +DDEP  +A+KQEAKNAFKALLESANV++DW+W+Q MR I+NDKRYGALKTLGE+KQ
Sbjct: 397  EKNLDDEPLTFASKQEAKNAFKALLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQ 456

Query: 1855 AFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXXXXXXXXXXXTRWSKAVTMFEDDKRFKAV 1676
            AFNEYL QRKKIEAEE+R+RQ++A                  +WSKAV++FE+D+RFKAV
Sbjct: 457  AFNEYLGQRKKIEAEERRMRQKRAREEFTKMLEESKELTSSMKWSKAVSLFENDERFKAV 516

Query: 1675 DLEVDREDLFRNYLVDLXXXXXXXXXXEYRRNRLEFRQFLESCGFIKVDSQWRKVQDLLE 1496
            +   DREDLF NY+V+L          ++RRN  EF++FLESC FIKV+SQWRKVQD LE
Sbjct: 517  EKARDREDLFDNYIVELERKEREKAAEDHRRNVTEFKKFLESCDFIKVNSQWRKVQDRLE 576

Query: 1495 DDERCTRLDKIDRLDIFQDYIRDLXXXXXXXXXXXXXXXXXXXXKNRDTFRKMMEEHIAA 1316
            DDERC RL+K+DRL +FQDYIRDL                    KNRD FRK++EEH+A 
Sbjct: 577  DDERCLRLEKLDRLLVFQDYIRDLEKEEEEQKKIQKEQLRRAERKNRDGFRKLLEEHVAD 636

Query: 1315 GTLTARTHWGDYCQRVKDSEAYEAVASNTSGSTPKDLFEDVTEELDKKYDEDKAQIKDVL 1136
            G+LTA+ HW DYC +VKD   Y AVA+NTSGSTPKDLFEDV EEL+K+Y +DKA++KD +
Sbjct: 637  GSLTAKAHWLDYCLKVKDLPQYHAVATNTSGSTPKDLFEDVAEELEKQYRDDKARVKDAI 696

Query: 1135 KQEKIAVASTWTFEDFKSSFGDSTVLSSISDINVQLVYEDLIDXXXXXXXXXXXXXXXXX 956
            K  KI + STW FEDFK++  D      +SDIN+QL+Y++L++                 
Sbjct: 697  KSGKIIMTSTWIFEDFKAAILDDVSSPPVSDINLQLIYDELLERAKEKEEKEAKKRQRLA 756

Query: 955  KDFTDKLSSIKEINVLSTWEECKPLVEEISEYRSMGEENLCREVFDEYISRLQ 797
             D T  L + KEI   S+WE+C+PL EE  EYR++GEE++ +E+F+EYI+ LQ
Sbjct: 757  DDLTKLLHTYKEIMASSSWEDCRPLFEESQEYRAIGEESVIKEIFEEYIAHLQ 809



 Score = 68.6 bits (166), Expect = 2e-08
 Identities = 28/40 (70%), Positives = 36/40 (90%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            R+H SDRKKSRKH Y+PESDSE+RHKKHKR+ R+ S+++G
Sbjct: 914  RKHSSDRKKSRKHSYTPESDSENRHKKHKRDQRESSRKNG 953


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score =  669 bits (1727), Expect = 0.0
 Identities = 391/845 (46%), Positives = 500/845 (59%), Gaps = 25/845 (2%)
 Frame = -3

Query: 3256 QFRPATQAQQGQQFIPTQSTPQFH------PSHNXXXXXXXXXXXPFSQPMPQFLSRPPQ 3095
            QFRP   AQ GQ FI + S  QF        S N            + Q MPQ + RP  
Sbjct: 11   QFRPVIPAQPGQAFI-SSSAQQFQLAGQNISSSNVGVPAGQVQPHQYPQSMPQLVQRPGH 69

Query: 3094 PGHGAPSSYP-----QPSMPMTSSMAQPQSNAPGQGAPFPSSYTYAPSSFGLPQTGISMP 2930
            P +  PSS P       + P+TS   Q Q N        P+++ +   + GLP   +S P
Sbjct: 70   PSYVTPSSQPIQMPYVQTRPLTSVPPQSQQNVAA-----PNNHMHGLGAHGLP---LSSP 121

Query: 2929 PQFQPSSQMSTP----GGQLWMHS-SQGTPVVAPLQQGSLQSFPTTATVPAVNGSGTAQQ 2765
              FQP SQM  P      Q W+ S SQ T +V+P+ Q +  S   +A  PA N     QQ
Sbjct: 122  YTFQPMSQMHAPVSVGNSQPWLSSASQTTNLVSPIDQANQHS-SVSAVNPAANAPVFNQQ 180

Query: 2764 SASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERADASTVWKEFTTQEGRKYYYN 2585
             +SDWQE+ +ADGRRYYYNK TKQSSWEKPLELMTPLERADASTVWKEFT  +GRKYYYN
Sbjct: 181  LSSDWQEHASADGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYN 240

Query: 2584 KETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXXXXXXXXGEQPPAAVNLTISN 2405
            K TK+SKWT+P+                ++ +++              QP  A  L  S+
Sbjct: 241  KVTKESKWTMPEELKLAREQAQKEATQGTQTDISVMAP----------QPTLAAGL--SH 288

Query: 2404 TSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRAVPVMQTAAASATGVPVGNM- 2228
              TP  S+                           S   +  VM T +++ TG P+ +  
Sbjct: 289  AETPAISS----VNSSISPTVSGVATSPVPVTPFVSVSNSPSVMVTGSSAITGTPIASTT 344

Query: 2227 -----VASAPSEAYGISGVPEKL---SSARISMENPSSQVGLSPTVGASVPDGEEEKKGT 2072
                 V+S    A G +G P  +   +S+    E+ +SQ   +   G S  D EE +KG 
Sbjct: 345  SVSGTVSSQSVAASGGTGPPAVVHANASSVTPFESLASQDVKNTVDGTSTEDIEEARKGM 404

Query: 2071 TVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEADWSWDQAMRAIVNDKR 1892
             VAGK+N   +EEK+ DDEP ++A KQEAKNAFKALLES NV++DW+W+QAMR I+NDKR
Sbjct: 405  AVAGKVNETVLEEKSADDEPLVFANKQEAKNAFKALLESVNVQSDWTWEQAMREIINDKR 464

Query: 1891 YGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXXXXXXXXXXXTRWSKAV 1712
            YGALKTLGE+KQAF+EYL  RKK++AEE+R+RQ+KA                 TRWSKAV
Sbjct: 465  YGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFTKMLEESKELTSSTRWSKAV 524

Query: 1711 TMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRNRLEFRQFLESCGFIKV 1532
            +MFE+D+RFKAV+   DREDLF +Y+V+L          E+++N  E+R+FLESC +IKV
Sbjct: 525  SMFENDERFKAVERSRDREDLFESYIVELERKEKERAAEEHKKNIAEYRKFLESCDYIKV 584

Query: 1531 DSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXXXXXXXXXXXXXXKNRD 1352
             SQWRKVQD LEDDERC+RL+K+DRL IFQDYIRDL                    KNRD
Sbjct: 585  SSQWRKVQDRLEDDERCSRLEKLDRLLIFQDYIRDLEKEEEDQKKIQKERVRRIERKNRD 644

Query: 1351 TFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGSTPKDLFEDVTEELDKK 1172
             FRK+MEEHIAAG  TA+T W DYC +VK+   Y+AVASNTSGSTPKDLFEDV E+L+ K
Sbjct: 645  EFRKLMEEHIAAGVFTAKTFWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVLEDLENK 704

Query: 1171 YDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDINVQLVYEDLIDXXXXX 992
            Y E+K QIKDV+K  KI + S+WTF+DFK++  +S  L ++SDIN +LVYEDL++     
Sbjct: 705  YHEEKTQIKDVVKAAKITITSSWTFDDFKAAIEESGSL-AVSDINFKLVYEDLLERAKEK 763

Query: 991  XXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEYRSMGEENLCREVFDEY 812
                         DF+  L S+KEI   S WE+ K L EE  EYRS+GEE+  +EVF+E+
Sbjct: 764  EEKEAKRRQRLADDFSGLLQSLKEITTSSNWEDSKQLFEESEEYRSIGEESFAKEVFEEH 823

Query: 811  ISRLQ 797
            I+ LQ
Sbjct: 824  ITHLQ 828



 Score = 73.2 bits (178), Expect = 8e-10
 Identities = 30/39 (76%), Positives = 38/39 (97%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRS 329
            R+HGSDRKKSRKH YSPESDSE+RH++HKR++RDGS+R+
Sbjct: 931  RKHGSDRKKSRKHAYSPESDSENRHRRHKRDHRDGSRRN 969


>ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cicer arietinum]
          Length = 1000

 Score =  650 bits (1678), Expect = 0.0
 Identities = 383/848 (45%), Positives = 483/848 (56%), Gaps = 24/848 (2%)
 Frame = -3

Query: 3268 PYPMQFRPATQAQQGQQFIPTQSTPQFHPSHNXXXXXXXXXXXP--FSQPMPQFLSRPPQ 3095
            P  +QFRP   AQQGQ F+P  S    H  H               +SQ M Q   R  Q
Sbjct: 8    PSGIQFRPVIHAQQGQPFVPMTSQQFGHAGHAVPSSNVGMPGQQLQYSQSMQQMAPRQIQ 67

Query: 3094 PGH------GAPSSYPQPSMPMTSSMAQPQSNAPG----------QGAPFPSSYTYAPSS 2963
            PGH      G P  Y Q + P+TS     Q   P            GAP  SSYT+ PS 
Sbjct: 68   PGHPGSSSQGIPMPYIQTNRPLTSVPQHAQQAVPHVSNHMPGLAVSGAPPQSSYTFTPS- 126

Query: 2962 FGLPQTGISMPPQFQPSSQM-STPGGQLWMHS-SQGTPVVAPLQQGSLQSFPTTATVPAV 2789
            +G  Q   +  PQ+Q   QM + P GQ W  S SQ    V  +    +QS  T +T  A 
Sbjct: 127  YGQQQDNANALPQYQHQPQMLAPPAGQPWPSSVSQSAAAVTSVPPAGVQSSGTASTDAAT 186

Query: 2788 NGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERADASTVWKEFTTQ 2609
            N   T   SASDWQE+ +ADGRRYYYNK T+QSSWEKPLELM+PLERADASTVWKEFT+ 
Sbjct: 187  NT--TNHNSASDWQEHSSADGRRYYYNKRTRQSSWEKPLELMSPLERADASTVWKEFTSS 244

Query: 2608 EGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXXXXXXXXGEQPPA 2429
            +GRKYYYNK T+QS WTIP+                +  E +                P 
Sbjct: 245  DGRKYYYNKVTQQSTWTIPEELKLAREHAHKTISQGTVSETSDTSNAAGSFAAT----PT 300

Query: 2428 AVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXVMASEPRAVPVMQTAAASAT 2249
            A N    N  T   S G                          S   +V       +SAT
Sbjct: 301  AANADSFNALT---SNGLASSPSSITPIAATDHQQLFSGLSGTSVSHSV-----VTSSAT 352

Query: 2248 GVPVGNMV--ASAPSEAYGISGVPEKLSSARIS--MENPSSQVGLSPTVGASVPDGEEEK 2081
            GV    +V  ++AP+   G SGV      ++I   +EN ++Q   +   GA + D EE K
Sbjct: 353  GVEPSPVVTVSTAPTTVAGSSGVAANSLDSKIPSIVENLATQDSTTSVNGAPLQDLEEAK 412

Query: 2080 KGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEADWSWDQAMRAIVN 1901
            +G  V GK NV P EEKT D E  +YA K EAKNAFKALLES +V++DW+W+QAMR IVN
Sbjct: 413  RGLPVVGKTNVTPSEEKTNDGETLVYANKLEAKNAFKALLESVSVQSDWTWEQAMREIVN 472

Query: 1900 DKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXXXXXXXXXXXTRWS 1721
            DKRY ALKTLGE+KQAFNEYL QRKK+EAEE+R++Q+KA                 TRWS
Sbjct: 473  DKRYNALKTLGERKQAFNEYLGQRKKLEAEERRIKQKKAREEFTKMLEECKELTSSTRWS 532

Query: 1720 KAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRNRLEFRQFLESCGF 1541
            KA++M E D+RF AV+   DREDLF +Y+V+L          E+RRN  E+R+FL+SC +
Sbjct: 533  KAISMLESDERFSAVERPRDREDLFESYMVELERKEKENAAEEHRRNLAEYRKFLQSCDY 592

Query: 1540 IKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXXXXXXXXXXXXXXK 1361
            +KV+S WRK+QD LEDD+R  +L+KIDRL +FQDYIRDL                    K
Sbjct: 593  VKVNSHWRKIQDRLEDDDRYLQLEKIDRLLVFQDYIRDLEKEEEEQKKIQKERLRRGERK 652

Query: 1360 NRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGSTPKDLFEDVTEEL 1181
            NRD FRK++EEH+A G LTA+T W DYC +VK+   Y+AVASNTSGSTPKDLFEDV E+L
Sbjct: 653  NRDAFRKLLEEHVADGVLTAKTQWRDYCLKVKELPQYQAVASNTSGSTPKDLFEDVFEDL 712

Query: 1180 DKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDINVQLVYEDLIDXX 1001
            +K+Y EDK+ IKD LK  KI V +T  FEDFKS   +      IS+IN++L+YE+L++  
Sbjct: 713  EKQYHEDKSLIKDTLKSGKITVVTTSVFEDFKSVVLEEAACQKISEINLKLLYEELLERA 772

Query: 1000 XXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEYRSMGEENLCREVF 821
                            DFT+ L ++K+I   S WE+CKPL EE  EYRS+G+E+  RE+F
Sbjct: 773  KEKEEKEAKKRQRLADDFTNVLYTLKDITTTSEWEDCKPLFEETQEYRSIGDESYSREIF 832

Query: 820  DEYISRLQ 797
            +EYI+ L+
Sbjct: 833  EEYITYLK 840



 Score = 70.1 bits (170), Expect = 7e-09
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            RRHGSDRKKSRKH  SPESD+ESRHK+HKRE+ D S+R+G
Sbjct: 945  RRHGSDRKKSRKHANSPESDNESRHKRHKREHWDSSRRTG 984


>ref|XP_007160940.1| hypothetical protein PHAVU_001G029800g [Phaseolus vulgaris]
            gi|561034404|gb|ESW32934.1| hypothetical protein
            PHAVU_001G029800g [Phaseolus vulgaris]
          Length = 1000

 Score =  649 bits (1675), Expect = 0.0
 Identities = 383/853 (44%), Positives = 491/853 (57%), Gaps = 29/853 (3%)
 Frame = -3

Query: 3268 PYPMQFRPATQAQQGQQFIPTQST---PQFH--PSHNXXXXXXXXXXXPFSQPMPQFLSR 3104
            P  MQFRP  QAQQGQ F+P  S    P  H  PS N            +SQPM Q   R
Sbjct: 7    PSSMQFRPVIQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQLTPR 66

Query: 3103 PPQPGHGAPSSYPQP-----------SMPMTSSMAQPQSN----APGQGAPFPSSYTYAP 2969
            P QPGH APSS P P           S+P  S    P SN     P  GA   SSYT+ P
Sbjct: 67   PMQPGHLAPSSQPIPMPYIQTNRPMSSIPPHSQSVPPLSNHMPGLPVSGAAPHSSYTFTP 126

Query: 2968 SSFGLPQTGISMPPQFQ-PSSQMSTPGGQLWMHS-SQGTPVVAPLQQGSLQSFPTTATVP 2795
            S +G      +   Q+Q P   ++ PGGQ W+ S SQ       +Q   LQS   T T  
Sbjct: 127  S-YGQQHDNANALAQYQHPPQMLAPPGGQPWLSSASQSVAPSTSVQPAGLQSSGATLTDA 185

Query: 2794 AVNGSGTAQQSASDWQEYDAADGRRYYYNKNTKQSSWEKPLELMTPLERADASTVWKEFT 2615
              N   T Q S SDWQE+ + DGRRYYYNK T+QSSWEKPLELM+P+ERADASTVWKEFT
Sbjct: 186  VTNA--TNQHSLSDWQEHTSGDGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFT 243

Query: 2614 TQEGRKYYYNKETKQSKWTIPDXXXXXXXXXXXXXXXASRPEMNXXXXXXXXXXXXGEQP 2435
            + +G+KYYYNK T+QS W+IP+                 + E +             + P
Sbjct: 244  SSDGKKYYYNKVTQQSTWSIPEELQLAREQAQKAANQGMQSETS-------------DTP 290

Query: 2434 PAAVNLTISNTSTPTKSTGXXXXXXXXXXXXXXXXXXXXXXXV-MASEPRAVPVMQ-TAA 2261
             AAV+   ++T+T   S                           + S      V Q T  
Sbjct: 291  NAAVSSIATSTATNAASLNPSLTSNGLASSPSSVTPIASTDSPQLVSGLFGTSVSQSTVT 350

Query: 2260 ASATGVPVGNM--VASAPSEAYGISGVPE---KLSSARISMENPSSQVGLSPTVGASVPD 2096
            +S TGV   ++   ++AP    G SG+ E   +LS     +EN +SQ   S   G+S  D
Sbjct: 351  SSTTGVEPSSVGTTSAAPILVAGGSGLSENSPQLSKMPPIVENQASQDFASAN-GSSPQD 409

Query: 2095 GEEEKKGTTVAGKLNVAPVEEKTVDDEPFIYATKQEAKNAFKALLESANVEADWSWDQAM 1916
             EE KK     GK NV P EEKT DDE  +YA K EAKNAFKALLES NV++DW+W+QAM
Sbjct: 410  IEEAKKALAEVGKNNVIPPEEKTNDDETLVYANKLEAKNAFKALLESVNVQSDWTWEQAM 469

Query: 1915 RAIVNDKRYGALKTLGEKKQAFNEYLMQRKKIEAEEKRLRQRKAXXXXXXXXXXXXXXXX 1736
            R I+NDKRY ALKTLGE+KQAFNEYL QRKK+EAEE+R++Q++A                
Sbjct: 470  REIINDKRYNALKTLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTS 529

Query: 1735 XTRWSKAVTMFEDDKRFKAVDLEVDREDLFRNYLVDLXXXXXXXXXXEYRRNRLEFRQFL 1556
              RWSKA++MFE+D+RF AV+   DREDLF +Y+V+L          E+RRN  E+R+FL
Sbjct: 530  SMRWSKAISMFENDERFNAVERPRDREDLFESYMVELERKEKENAAEEHRRNIAEYRKFL 589

Query: 1555 ESCGFIKVDSQWRKVQDLLEDDERCTRLDKIDRLDIFQDYIRDLXXXXXXXXXXXXXXXX 1376
            ESC ++KV+S WRK+QD LEDD+R  RL+KIDRL +FQDYIRDL                
Sbjct: 590  ESCDYVKVNSHWRKIQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEQRRIQKDRVR 649

Query: 1375 XXXXKNRDTFRKMMEEHIAAGTLTARTHWGDYCQRVKDSEAYEAVASNTSGSTPKDLFED 1196
                KNRD FRK++EEH+A G LTA+T W +YC +V+D   Y+AVASNT GSTPKDLFE 
Sbjct: 650  RGERKNRDAFRKLLEEHVATGILTAKTQWREYCLKVRDLPQYQAVASNTLGSTPKDLFEL 709

Query: 1195 VTEELDKKYDEDKAQIKDVLKQEKIAVASTWTFEDFKSSFGDSTVLSSISDINVQLVYED 1016
            V E+L+K+Y EDK  IKD +K  KI V +T  FE+FK++  +     +ISDIN++L++E+
Sbjct: 710  VAEDLEKQYHEDKTLIKDTIKSGKIIVVTTSVFEEFKAAVLEDVACQTISDINLKLIFEE 769

Query: 1015 LIDXXXXXXXXXXXXXXXXXKDFTDKLSSIKEINVLSTWEECKPLVEEISEYRSMGEENL 836
            L++                  +FT+ L + K+I   S WE+CK L EE  EYRS+G+E+ 
Sbjct: 770  LLERAKEKEEKEAKKRQRLADEFTNLLYTFKDITTSSKWEDCKSLFEETQEYRSIGDESY 829

Query: 835  CREVFDEYISRLQ 797
             RE+F+EYI+ L+
Sbjct: 830  SREIFEEYITYLK 842



 Score = 63.9 bits (154), Expect = 5e-07
 Identities = 27/40 (67%), Positives = 36/40 (90%)
 Frame = -3

Query: 445  RRHGSDRKKSRKHEYSPESDSESRHKKHKREYRDGSKRSG 326
            RRHGS+RKKSRKH  SPESD+E+RH++HKRE+ D S+++G
Sbjct: 945  RRHGSERKKSRKHANSPESDTENRHRRHKREHWDVSRKTG 984