BLASTX nr result

ID: Mentha29_contig00003023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00003023
         (501 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAO49734.1| nuclear pore complex protein Nup98a [Nicotiana b...    86   4e-15
gb|EYU35601.1| hypothetical protein MIMGU_mgv1a0006742mg, partia...    79   9e-13
ref|XP_004236952.1| PREDICTED: nuclear pore complex protein Nup9...    78   1e-12
gb|EPS58879.1| nucleoporin 98, partial [Genlisea aurea]                76   4e-12
ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup9...    74   2e-11
ref|XP_006360451.1| PREDICTED: nuclear pore complex protein Nup9...    74   2e-11
emb|CBI34639.3| unnamed protein product [Vitis vinifera]               70   4e-10
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...    70   4e-10
dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                         67   3e-09
ref|XP_006594707.1| PREDICTED: nuclear pore complex protein Nup9...    57   4e-06
ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup9...    57   4e-06
ref|XP_004495523.1| PREDICTED: nuclear pore complex protein Nup9...    56   5e-06
ref|XP_004495522.1| PREDICTED: nuclear pore complex protein Nup9...    56   5e-06
ref|XP_004495521.1| PREDICTED: nuclear pore complex protein Nup9...    56   5e-06
ref|XP_004495520.1| PREDICTED: nuclear pore complex protein Nup9...    56   5e-06
ref|XP_004495519.1| PREDICTED: nuclear pore complex protein Nup9...    56   5e-06
ref|XP_004495518.1| PREDICTED: nuclear pore complex protein Nup9...    56   5e-06
ref|XP_004495517.1| PREDICTED: nuclear pore complex protein Nup9...    56   5e-06
ref|XP_004495516.1| PREDICTED: nuclear pore complex protein Nup9...    56   5e-06

>dbj|BAO49734.1| nuclear pore complex protein Nup98a [Nicotiana benthamiana]
          Length = 1023

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 59/152 (38%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
 Frame = +3

Query: 57  TSNTTNLFGSTAPTTSSLFGPPTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 236
           +SN +N FGST+ TT SLFGP  PA                                   
Sbjct: 434 SSNASNPFGSTSSTTPSLFGPSAPAFGTNTSPSLFGSSSASGFGSSTSIFGSSSAQATAP 493

Query: 237 XXXXXXXXXXX--SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XX 404
                        SPLFQSTTP+  Q SS FGQT+S+FGQ+T A+GQSN+FSTPST    
Sbjct: 494 AFGPSLSFGNTQSSPLFQSTTPSFGQTSSAFGQTASSFGQSTPAFGQSNLFSTPSTGFGG 553

Query: 405 XXXXXXXXXXXXXXXXXXQTTPSNSTPFQSAQ 500
                             QTTPS STPFQ  Q
Sbjct: 554 NLFSSAPLLNTSNTIGFGQTTPSLSTPFQLTQ 585


>gb|EYU35601.1| hypothetical protein MIMGU_mgv1a0006742mg, partial [Mimulus
           guttatus]
          Length = 915

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 57/152 (37%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
 Frame = +3

Query: 57  TSNTTNLFGSTAPTTSSLFGPPTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 236
           TS T+NLFGST+   SS+FG  T                                     
Sbjct: 337 TSTTSNLFGSTSSAPSSIFGSTTQTFGANTSPSLFSSSSTAPFGSPSVFGTTSGQGTASA 396

Query: 237 XXXXXXXXXXXS-PLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST---XX 404
                      S PLFQSTTPTL Q +S FGQT S FGQT  A+GQ+N+F+TPST     
Sbjct: 397 FSGGLGFGNTQSSPLFQSTTPTLGQTTSTFGQTPSGFGQTAPAFGQANLFTTPSTGFSGN 456

Query: 405 XXXXXXXXXXXXXXXXXXQTTPSNSTPFQSAQ 500
                             QTTPS +TPFQSAQ
Sbjct: 457 MFSSTPSMPNNNNTLGFGQTTPS-TTPFQSAQ 487


>ref|XP_004236952.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like [Solanum
           lycopersicum]
          Length = 994

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 55/151 (36%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
 Frame = +3

Query: 57  TSNTTNLFGSTAPTTSSLFGPPTP-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233
           +SNT+N FGST+ T+ SLFG  +                                     
Sbjct: 418 SSNTSNPFGSTSSTSPSLFGSTSAFGQSTSPTLFGSASASGFGSSTSIFGSSSAQNTASA 477

Query: 234 XXXXXXXXXXXXSPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXX 407
                       SPLFQSTTP+  Q +S FGQT+S+F QTT A+GQSN+FSTPST     
Sbjct: 478 FGPSLSFGNTQSSPLFQSTTPSFGQTNSAFGQTTSSFAQTTPAFGQSNLFSTPSTGFGSN 537

Query: 408 XXXXXXXXXXXXXXXXXQTTPSNSTPFQSAQ 500
                            QTTPS STPFQ  Q
Sbjct: 538 LFSSAPLLNTSSTMGFGQTTPSLSTPFQLTQ 568


>gb|EPS58879.1| nucleoporin 98, partial [Genlisea aurea]
          Length = 595

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 43/113 (38%), Positives = 53/113 (46%)
 Frame = +3

Query: 60  SNTTNLFGSTAPTTSSLFGPPTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 239
           SN +N+FGST   T+SLFG   PA                                    
Sbjct: 451 SNNSNIFGSTTSATTSLFGSTAPAFGGNTSPLFSSASSSAFGSPSIFGSASAPGAASTFG 510

Query: 240 XXXXXXXXXXSPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST 398
                     SPLFQS TP++ Q SSPFGQ+ SAFGQ ++ +GQSN+F TPST
Sbjct: 511 TGLSFGNTQSSPLFQSLTPSVGQTSSPFGQSPSAFGQASTGFGQSNLFGTPST 563


>ref|XP_006360453.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
           [Solanum tuberosum]
          Length = 993

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 54/151 (35%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
 Frame = +3

Query: 57  TSNTTNLFGSTAPTTSSLFGPPTP-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233
           +SNT+N FGST+ T+ SLFG  +                                     
Sbjct: 419 SSNTSNPFGSTSSTSPSLFGSTSAFGQSTSPTLFGSSSASGFGSSTSIFGSSPAQATAPA 478

Query: 234 XXXXXXXXXXXXSPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXX 407
                       SPLF ST P   Q SS FGQT+S+F QTT A+GQSN+FSTPST     
Sbjct: 479 FGPSLSFGNTQSSPLFPSTAPPFGQTSSAFGQTASSFAQTTPAFGQSNLFSTPSTGFGGN 538

Query: 408 XXXXXXXXXXXXXXXXXQTTPSNSTPFQSAQ 500
                            QTTPS STPFQ  Q
Sbjct: 539 LFSSAPLLNTSSTMGFGQTTPSLSTPFQLTQ 569


>ref|XP_006360451.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
           [Solanum tuberosum] gi|565389417|ref|XP_006360452.1|
           PREDICTED: nuclear pore complex protein Nup98-Nup96-like
           isoform X2 [Solanum tuberosum]
          Length = 994

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 54/151 (35%), Positives = 63/151 (41%), Gaps = 3/151 (1%)
 Frame = +3

Query: 57  TSNTTNLFGSTAPTTSSLFGPPTP-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233
           +SNT+N FGST+ T+ SLFG  +                                     
Sbjct: 419 SSNTSNPFGSTSSTSPSLFGSTSAFGQSTSPTLFGSSSASGFGSSTSIFGSSPAQATAPA 478

Query: 234 XXXXXXXXXXXXSPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXX 407
                       SPLF ST P   Q SS FGQT+S+F QTT A+GQSN+FSTPST     
Sbjct: 479 FGPSLSFGNTQSSPLFPSTAPPFGQTSSAFGQTASSFAQTTPAFGQSNLFSTPSTGFGGN 538

Query: 408 XXXXXXXXXXXXXXXXXQTTPSNSTPFQSAQ 500
                            QTTPS STPFQ  Q
Sbjct: 539 LFSSAPLLNTSSTMGFGQTTPSLSTPFQLTQ 569


>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQ-TTSAYGQSNMFSTPST---XXXXXXXXXXXXX 437
           SPLFQS+TP+L Q +S FGQ++SAFGQ TT ++GQS++F+TPST                
Sbjct: 537 SPLFQSSTPSLGQTASAFGQSTSAFGQSTTPSFGQSSIFNTPSTGFGGNLFSSAPPLLST 596

Query: 438 XXXXXXXQTTPSNSTPFQSAQ 500
                  QTTPS STPFQ AQ
Sbjct: 597 SNPVGFGQTTPSLSTPFQPAQ 617


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
           [Vitis vinifera]
          Length = 1013

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQ-TTSAYGQSNMFSTPST---XXXXXXXXXXXXX 437
           SPLFQS+TP+L Q +S FGQ++SAFGQ TT ++GQS++F+TPST                
Sbjct: 520 SPLFQSSTPSLGQTASAFGQSTSAFGQSTTPSFGQSSIFNTPSTGFGGNLFSSAPPLLST 579

Query: 438 XXXXXXXQTTPSNSTPFQSAQ 500
                  QTTPS STPFQ AQ
Sbjct: 580 SNPVGFGQTTPSLSTPFQPAQ 600


>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 39/80 (48%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST---XXXXXXXXXXXXXX 440
           SPLFQS TP++ Q+SS FGQT S FGQTT  +GQ+NMF+TPST                 
Sbjct: 521 SPLFQSNTPSIGQSSSAFGQTPS-FGQTTPGFGQANMFNTPSTGFGANMFSTTPSLLTTS 579

Query: 441 XXXXXXQTTPSNSTPFQSAQ 500
                 QT PS S+PFQ +Q
Sbjct: 580 SQMGFGQTMPSQSSPFQLSQ 599


>ref|XP_006594707.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X2
           [Glycine max]
          Length = 1016

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 35/80 (43%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTS-AYGQSNMFSTPST--XXXXXXXXXXXXXX 440
           SPLF S  PT  Q  S FGQ +S FGQTT+ ++ QS++FS+PS+                
Sbjct: 528 SPLFSSAAPTGGQTGSAFGQNTSPFGQTTTPSFSQSSLFSSPSSGLVGSIFSSSAPLTSN 587

Query: 441 XXXXXXQTTPSNSTPFQSAQ 500
                 QT PS STPFQ AQ
Sbjct: 588 NLTGFGQTAPSISTPFQPAQ 607


>ref|XP_003543179.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoformX1
           [Glycine max]
          Length = 1038

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 35/80 (43%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTS-AYGQSNMFSTPST--XXXXXXXXXXXXXX 440
           SPLF S  PT  Q  S FGQ +S FGQTT+ ++ QS++FS+PS+                
Sbjct: 528 SPLFSSAAPTGGQTGSAFGQNTSPFGQTTTPSFSQSSLFSSPSSGLVGSIFSSSAPLTSN 587

Query: 441 XXXXXXQTTPSNSTPFQSAQ 500
                 QT PS STPFQ AQ
Sbjct: 588 NLTGFGQTAPSISTPFQPAQ 607


>ref|XP_004495523.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X8
           [Cicer arietinum]
          Length = 987

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXXXXXXXXXXXXXX 443
           S LF S  PT  Q+ S FGQ +S FGQT + + QS++FS+PST                 
Sbjct: 507 SQLFSSAAPTNAQSGSAFGQNTSPFGQTAN-FSQSSLFSSPSTGLAGSIFSSSASLTSNA 565

Query: 444 XXXXXQTTPSNSTPFQSAQ 500
                QT PS STPFQSAQ
Sbjct: 566 LTGFGQTAPSMSTPFQSAQ 584


>ref|XP_004495522.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X7
           [Cicer arietinum]
          Length = 993

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXXXXXXXXXXXXXX 443
           S LF S  PT  Q+ S FGQ +S FGQT + + QS++FS+PST                 
Sbjct: 495 SQLFSSAAPTNAQSGSAFGQNTSPFGQTAN-FSQSSLFSSPSTGLAGSIFSSSASLTSNA 553

Query: 444 XXXXXQTTPSNSTPFQSAQ 500
                QT PS STPFQSAQ
Sbjct: 554 LTGFGQTAPSMSTPFQSAQ 572


>ref|XP_004495521.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X6
           [Cicer arietinum]
          Length = 995

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXXXXXXXXXXXXXX 443
           S LF S  PT  Q+ S FGQ +S FGQT + + QS++FS+PST                 
Sbjct: 497 SQLFSSAAPTNAQSGSAFGQNTSPFGQTAN-FSQSSLFSSPSTGLAGSIFSSSASLTSNA 555

Query: 444 XXXXXQTTPSNSTPFQSAQ 500
                QT PS STPFQSAQ
Sbjct: 556 LTGFGQTAPSMSTPFQSAQ 574


>ref|XP_004495520.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X5
           [Cicer arietinum]
          Length = 1005

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXXXXXXXXXXXXXX 443
           S LF S  PT  Q+ S FGQ +S FGQT + + QS++FS+PST                 
Sbjct: 528 SQLFSSAAPTNAQSGSAFGQNTSPFGQTAN-FSQSSLFSSPSTGLAGSIFSSSASLTSNA 586

Query: 444 XXXXXQTTPSNSTPFQSAQ 500
                QT PS STPFQSAQ
Sbjct: 587 LTGFGQTAPSMSTPFQSAQ 605


>ref|XP_004495519.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X4
           [Cicer arietinum]
          Length = 1022

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXXXXXXXXXXXXXX 443
           S LF S  PT  Q+ S FGQ +S FGQT + + QS++FS+PST                 
Sbjct: 524 SQLFSSAAPTNAQSGSAFGQNTSPFGQTAN-FSQSSLFSSPSTGLAGSIFSSSASLTSNA 582

Query: 444 XXXXXQTTPSNSTPFQSAQ 500
                QT PS STPFQSAQ
Sbjct: 583 LTGFGQTAPSMSTPFQSAQ 601


>ref|XP_004495518.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3
           [Cicer arietinum]
          Length = 1023

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXXXXXXXXXXXXXX 443
           S LF S  PT  Q+ S FGQ +S FGQT + + QS++FS+PST                 
Sbjct: 525 SQLFSSAAPTNAQSGSAFGQNTSPFGQTAN-FSQSSLFSSPSTGLAGSIFSSSASLTSNA 583

Query: 444 XXXXXQTTPSNSTPFQSAQ 500
                QT PS STPFQSAQ
Sbjct: 584 LTGFGQTAPSMSTPFQSAQ 602


>ref|XP_004495517.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X2
           [Cicer arietinum]
          Length = 1025

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXXXXXXXXXXXXXX 443
           S LF S  PT  Q+ S FGQ +S FGQT + + QS++FS+PST                 
Sbjct: 527 SQLFSSAAPTNAQSGSAFGQNTSPFGQTAN-FSQSSLFSSPSTGLAGSIFSSSASLTSNA 585

Query: 444 XXXXXQTTPSNSTPFQSAQ 500
                QT PS STPFQSAQ
Sbjct: 586 LTGFGQTAPSMSTPFQSAQ 604


>ref|XP_004495516.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1
           [Cicer arietinum]
          Length = 1026

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/79 (44%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +3

Query: 270 SPLFQSTTPTLPQNSSPFGQTSSAFGQTTSAYGQSNMFSTPST--XXXXXXXXXXXXXXX 443
           S LF S  PT  Q+ S FGQ +S FGQT + + QS++FS+PST                 
Sbjct: 528 SQLFSSAAPTNAQSGSAFGQNTSPFGQTAN-FSQSSLFSSPSTGLAGSIFSSSASLTSNA 586

Query: 444 XXXXXQTTPSNSTPFQSAQ 500
                QT PS STPFQSAQ
Sbjct: 587 LTGFGQTAPSMSTPFQSAQ 605


Top