BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha29_contig00002220
         (2693 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus...   732   0.0  
gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]       680   0.0  
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   654   0.0  
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   650   0.0  
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   634   e-179
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   629   e-177
ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ...   629   e-177
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   627   e-177
ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas...   625   e-176
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...   624   e-176
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein...   613   e-172
ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun...   609   e-171
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   604   e-170
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   599   e-168
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein...   597   e-167
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...   593   e-166
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   592   e-166
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   587   e-165
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   586   e-164
ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp....   573   e-160

>gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus guttatus]
          Length = 606

 Score =  732 bits (1890), Expect = 0.0
 Identities = 411/638 (64%), Positives = 457/638 (71%), Gaps = 7/638 (1%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLEKLLLEAAGRT                                     GY++RKPS
Sbjct: 1    MADLEKLLLEAAGRTTTSGRNRHSSPPSRRRRKGSYSDDGSDSKNEESDGDRGYTNRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1998
             SQVPLKKRLD A                              DLYKDEDDREKLSKLTE
Sbjct: 61   GSQVPLKKRLD-ATDRDEDRSSQEGDEDEYDHDRDSDNDSVGSDLYKDEDDREKLSKLTE 119

Query: 1997 LEREMILEARATKRSDRDLTEKLKKRKGQDRKG-SPPKAPTRSMRSKAERAGALDELVKR 1821
            LEREMILEARATKRSDRDLTEKLKKRKGQDRKG SPPK  TR+MRSKA+RAGALDELVKR
Sbjct: 120  LEREMILEARATKRSDRDLTEKLKKRKGQDRKGSSPPKTHTRNMRSKAQRAGALDELVKR 179

Query: 1820 RRESAKGGSGKRYSPVKRRSFAAA-----TLNSPXXXXXXXXXXXXXXXXXXGLADSDDD 1656
            RR++AKGGSG RYSPVKRRSFAAA      L+SP                  GL DSDDD
Sbjct: 180  RRDAAKGGSGGRYSPVKRRSFAAAAATTTALSSPSRSDSGSHSDDGDSTGDGGLGDSDDD 239

Query: 1655 KISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVGIGKSRSGPIYRLCVV 1476
            K+S  SKVPTFEDI+EITIRRSKL+KWFMEP+FDELIVGCFVRVGIGKSRSG IYRLCVV
Sbjct: 240  KVS--SKVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSIYRLCVV 297

Query: 1475 RNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSPPLKEEFDQWMREVER 1296
            RNVDATDPDR+YK DNKTT K+LNVVWG++SSAARWQMAM+SDS P +EEFDQW++EVER
Sbjct: 298  RNVDATDPDRKYKLDNKTTSKWLNVVWGSESSAARWQMAMVSDSAPQREEFDQWVKEVER 357

Query: 1295 SGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKSATWRPLNVAAEKDRLRRSLE 1116
            +GGH+P+KQEV++K+DAIQ+ NT+VY AATVKQM++EKK                 RSLE
Sbjct: 358  NGGHMPTKQEVMEKRDAIQRTNTFVYSAATVKQMLQEKK-----------------RSLE 400

Query: 1115 VAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEMNRRNRVENFKNASELRPVNA 936
            VAKEN+D+AEVERIK RL+ELE+SR+ LEK+SKA+KLAEMNR+NRVENFKNASE++PV  
Sbjct: 401  VAKENEDDAEVERIKARLQELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKPVTI 460

Query: 935  GLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXAETLIVKNGGGAVFXXX 756
            GLKAGEAGYDPFSRRWTRSRNYYV                   AE  +  NGGG      
Sbjct: 461  GLKAGEAGYDPFSRRWTRSRNYYV-----------GNSGGGVEAEVAVETNGGGGA-ALP 508

Query: 755  XXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKGAQAGYM 576
                           GKLVDT APVDQGTES +LHNFELPISL VLQKFGGP+G QAG+M
Sbjct: 509  GLAATEAALVAAAGAGKLVDTMAPVDQGTESNLLHNFELPISLAVLQKFGGPQGTQAGFM 568

Query: 575  ARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 465
            ARKQ +EA  GVKVP+ DGRRH LTL+VSDYKRRRGLL
Sbjct: 569  ARKQRIEATLGVKVPENDGRRHALTLSVSDYKRRRGLL 606


>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
          Length = 643

 Score =  680 bits (1755), Expect = 0.0
 Identities = 373/637 (58%), Positives = 437/637 (68%), Gaps = 3/637 (0%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLEKLLLEAAGRT                                      YS RKPS
Sbjct: 1    MADLEKLLLEAAGRTTTSERNRPPSRRRRKHSNSDGGSDSRNDDSDGDHH---YSQRKPS 57

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1998
            +SQVPLKKR DP                                LYKDE+DREKLSKLTE
Sbjct: 58   SSQVPLKKRFDPTDRDDRSSQDGDEINSNHERDSDNDTIGSD--LYKDEEDREKLSKLTE 115

Query: 1997 LEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSM-RSKAERAGALDELVKR 1821
            LEREMILE RATK SDRDLTEKLKKRKG D+K SP KA TRS  RSKAERAGALDELVKR
Sbjct: 116  LEREMILEGRATKISDRDLTEKLKKRKGHDKKLSPAKAHTRSSTRSKAERAGALDELVKR 175

Query: 1820 RRESAKGGSGK-RYSPVKRRSFAAATLNSPXXXXXXXXXXXXXXXXXXGLADSDDDKISA 1644
            RR++ KGG+ + RYSPVKRRSF AATL+SP                  G+ DSD+DK  +
Sbjct: 176  RRDAVKGGTTRSRYSPVKRRSFTAATLSSPSHSDSRSQSGEGESTGDGGIGDSDEDKTQS 235

Query: 1643 ESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVGIGKSRSGPIYRLCVVRNVD 1464
            +S VPTF+DI+EIT++RSKL KWFMEP+FDELI+GCFV+VGIGKSRSG +YRLCVVRNVD
Sbjct: 236  QSNVPTFDDIKEITVQRSKLLKWFMEPFFDELIIGCFVKVGIGKSRSGNVYRLCVVRNVD 295

Query: 1463 ATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSPPLKEEFDQWMREVERSGGH 1284
            ++DP R Y F+N+ THKYL++VWG++SSAARWQM MIS+  P +EEFD W +EVER+GG+
Sbjct: 296  SSDPSRAYDFENRKTHKYLSLVWGSESSAARWQMKMISNEAPKREEFDLWFKEVERTGGN 355

Query: 1283 LPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKSATWRPLNVAAEKDRLRRSLEVAKE 1104
            +P++QEV +K++A+Q+ N +VY AATVKQMV+EKKSAT +P+NVA EKDRLRR++EVA+E
Sbjct: 356  MPTRQEVSEKREALQRINRFVYSAATVKQMVQEKKSATHKPINVALEKDRLRRAMEVARE 415

Query: 1103 NKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEMNRRNRVENFKNASELRPVNAGLKA 924
            N D  E++ I+ +L ELE+SR+V EKDSKA KLAEMN +NR  NFKNASE++PVN  LKA
Sbjct: 416  NDDHDEMKEIQRKLSELESSRKVPEKDSKAAKLAEMNSKNRKANFKNASEMKPVNTSLKA 475

Query: 923  GEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXAETLIVKNGGGAVFXXXXXXX 744
            GE GYDPFSRRWTRSRNYYV                   A T                  
Sbjct: 476  GEVGYDPFSRRWTRSRNYYVSNAATGIGEANGSANVASVAATAAALEAAAGA-------- 527

Query: 743  XXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNFELPISLTVLQKFGGPKGAQAGYMARKQ 564
                       GKLVDT APVDQGTES +LH+FELPISL  LQ+ GGP+GAQAG MARKQ
Sbjct: 528  -----------GKLVDTNAPVDQGTESNLLHDFELPISLAALQRLGGPQGAQAGLMARKQ 576

Query: 563  MVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL*FC 456
             +EAN+GVKVP+ DGRRH LTLTVSDYKRRR  L  C
Sbjct: 577  WIEANYGVKVPENDGRRHALTLTVSDYKRRRDPLTMC 613


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
            [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform 2 [Solanum lycopersicum]
          Length = 645

 Score =  654 bits (1687), Expect = 0.0
 Identities = 364/601 (60%), Positives = 423/601 (70%), Gaps = 23/601 (3%)
 Frame = -1

Query: 2198 YSSRKPSASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRE 2019
            YS RK S SQVPLKKRLDP                               DLYKD+DDR+
Sbjct: 54   YSGRKLSGSQVPLKKRLDP-QERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQ 112

Query: 2018 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSK------- 1860
            KL+++TELEREMIL  RA K+SDR L +K+ K + Q RK S P + +R MRS        
Sbjct: 113  KLAQMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRA 172

Query: 1859 AERAGALDELVKRR-------------RESAKGGSGKR-YSPVKRRSFAAATL-NSPXXX 1725
            A+R  AL+E+  +R             R++A+ GSG R YSP+KRRSF AA+L +SP   
Sbjct: 173  ADRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRG 232

Query: 1724 XXXXXXXXXXXXXXXGLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 1545
                           G+ DSDDDK S ES++PTFEDI+EI+IRRSKLAKWFMEP+FDELI
Sbjct: 233  ESDSHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELI 292

Query: 1544 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1365
            VGCFVRVGIG+SRSGPIYRLCVVRNVDA+DP+RQYK +NKTT K+LNVVWGN++SAARWQ
Sbjct: 293  VGCFVRVGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQ 352

Query: 1364 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1185
            MAMISDSPPL++EFDQW+REVERSGG +PSKQ+VL+KK+AIQK NT+VY A TVKQM+++
Sbjct: 353  MAMISDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 412

Query: 1184 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1005
            KKSATWRPLNVAAEKDRLRR +EVAK   DEAEVERIK RL+ELE SR+V EKD KA +L
Sbjct: 413  KKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRL 472

Query: 1004 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 825
            AEMNR+NRVENFKNASELRPVN  LKAGEAGYDPFSRRWTRS NY+              
Sbjct: 473  AEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASNGEAAAAAA 532

Query: 824  XXXXXXAETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNF 645
                         +GG A                    GKLVDT APVDQGTES  LH+F
Sbjct: 533  LAAEDNNGAGGTADGGMAA--------TAAALQAAAGAGKLVDTNAPVDQGTESNTLHDF 584

Query: 644  ELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGL 468
            +LPISL VLQKFGG +G QAG+MARKQ +EA  G  VP+ DGRRH LTL+VSDYKRRRGL
Sbjct: 585  DLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGL 644

Query: 467  L 465
            L
Sbjct: 645  L 645


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  650 bits (1678), Expect = 0.0
 Identities = 361/601 (60%), Positives = 423/601 (70%), Gaps = 23/601 (3%)
 Frame = -1

Query: 2198 YSSRKPSASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRE 2019
            YS RK S SQVPLKKRLDP                               DLYKD+DDR+
Sbjct: 54   YSGRKLSGSQVPLKKRLDP-QERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQ 112

Query: 2018 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSK------- 1860
            KL+++TELEREMIL  RA K+SDR L +K+ K + Q RK S P + +R MRS        
Sbjct: 113  KLAQMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRA 172

Query: 1859 AERAGALDELVKRR-------------RESAKGGSGKR-YSPVKRRSFAAATL-NSPXXX 1725
            A+R  AL+E+  +R             R++A+ GSG R YSP+KRRSF AATL +SP   
Sbjct: 173  ADRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRG 232

Query: 1724 XXXXXXXXXXXXXXXGLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 1545
                           G+ DSDDDK S ES++PTFEDI+EI+IRRSKLAKWFMEP+FDELI
Sbjct: 233  ESDSHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELI 292

Query: 1544 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1365
            VGCFVRVGIG+SRSGPIYRLCVVRNVD++DP+RQYK +NKTT K+LNVVWGN++SAARWQ
Sbjct: 293  VGCFVRVGIGRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQ 352

Query: 1364 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1185
            MAM+SDSPPL++EFDQW+REVERSGG +PSKQ+VL+KK+AIQK NT+VY A TVKQM+++
Sbjct: 353  MAMVSDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 412

Query: 1184 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1005
            KKSATWRPLNVAAEKDRLRR +EVAK   DEAEVERIK RL+EL+ SR+V EKD KA +L
Sbjct: 413  KKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRL 472

Query: 1004 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 825
            AEMNR+NRVENFKNASELRPVN  LKAG+AGYDPFSRRWTRS NY+              
Sbjct: 473  AEMNRKNRVENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYFA-KGANEEAEGASN 531

Query: 824  XXXXXXAETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNF 645
                  A      N G +                    GKLVDT APVDQGTES  LH+F
Sbjct: 532  GEVAAAAALAAEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDF 591

Query: 644  ELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGL 468
            +LPISL VLQKFGG +G QAG+MARKQ +EA  G  VP+ DGRRH LTL+VSDYKRRRGL
Sbjct: 592  DLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGL 651

Query: 467  L 465
            L
Sbjct: 652  L 652


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  634 bits (1636), Expect = e-179
 Identities = 362/660 (54%), Positives = 432/660 (65%), Gaps = 29/660 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLE LLLEAAGRT                                      Y+SRKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDREKLSKL 2004
             SQVPLKKRLDP                                  LYKDEDDR KLS++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 2003 TELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG-- 1845
            TEL+REMIL  RATK+ D++L  K+  K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADRS 179

Query: 1844 ----ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXX 1713
                AL+EL  +R            RE+++    + +SP KR+ F + +L+S        
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSESES 239

Query: 1712 XXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 1539
                          + DSDDD+  A S+ P+F+D++EITIRRSKLAKWFMEP+F+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 1538 CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 1359
            CFVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 1358 MISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKK 1179
            M+SDS PL+EEF QW++EV+RSGG +PSKQ+VL+KK AIQK  T+VY AATVKQM++EKK
Sbjct: 360  MVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 1178 SATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAE 999
            SA+ RPLNVAAEKDRLRR LE+A+   DEAEVERIKTRL ELEASR+  +KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKLAE 479

Query: 998  MNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXX 819
            MNR+NR ENFKNASE++PVN GLKAGEAGYDPFSRRWTRSRNYY                
Sbjct: 480  MNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNSVN 539

Query: 818  XXXXAETLIVKNGGGA-VFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNFE 642
                       NG GA V                   GKLVDT APVDQGTES MLHNFE
Sbjct: 540  GNVAGAG---SNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFE 596

Query: 641  LPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 465
            LPISL +LQKFGG +GAQAG+MARKQ +EA  G +V + DGRRH LTLTVSDYKRRRGLL
Sbjct: 597  LPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  629 bits (1622), Expect = e-177
 Identities = 360/660 (54%), Positives = 432/660 (65%), Gaps = 29/660 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLE LLLEAAGRT                                      Y+SRKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDREKLSKL 2004
             SQVPLKKRLDP                                  LYKDEDDR KLS++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 2003 TELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG-- 1845
            TEL+REMIL  RATK+ D++L  K+  K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRS 179

Query: 1844 ----ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXX 1713
                AL+EL  +R            RE+++    + +SP KR++F + +L+S        
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESES 239

Query: 1712 XXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 1539
                          +ADSDDD+  A S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 1538 CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 1359
            CFVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 1358 MISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKK 1179
            M+SDS P++EEF QW++EV+ SGG +PSKQ+VL+KK AIQK  T+VY AATVKQM++EKK
Sbjct: 360  MVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 1178 SATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAE 999
            SA+ RPLNVAAEKDRLRR LE+A+   DEAEVERIKTRL+ELEASR+  +KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAE 479

Query: 998  MNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXX 819
            MNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYY                
Sbjct: 480  MNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNIVN 539

Query: 818  XXXXAETLIVKNGGGA-VFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNFE 642
                       N  GA V                   GKLVDT APVDQGTES MLHNFE
Sbjct: 540  GNVAGAG---SNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFE 596

Query: 641  LPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 465
            LPISL +LQK+GG  GAQAG+MARKQ +E+  G +V + DGRRH LTLTVSDYKRRRGLL
Sbjct: 597  LPISLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|590624750|ref|XP_007025692.1| PAF1 complex component
            isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1|
            PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  629 bits (1621), Expect = e-177
 Identities = 357/665 (53%), Positives = 431/665 (64%), Gaps = 34/665 (5%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLE LLLEAAGRT                                     GY+SRKPS
Sbjct: 1    MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLSK 2007
             SQVPLKKRLDPA                                  LYK+EDDR KL++
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 2006 LTELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG- 1845
            +TELERE+IL  RA KR D+  TEK++ ++  DR     K +PP   +R +RS A  A  
Sbjct: 121  MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 1844 ------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXX 1722
                  AL+EL  +R            R++++G SG R  SPVKR+ F A++L+S     
Sbjct: 181  AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240

Query: 1721 XXXXXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDEL 1548
                             + DSDDD+       PTF+DI+EITIRRSKLAKWFMEP+F+EL
Sbjct: 241  SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300

Query: 1547 IVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARW 1368
            IVGC+VRVGIG+S+SGPIYRLC+VRNVDAT+P+R YK +NKTT+KYLNVVWGN+SSAARW
Sbjct: 301  IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360

Query: 1367 QMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVK 1188
            QMAMISDSPP +EEF Q +RE+ERSGG +PSKQ+VL+KK+A+QK  T+VY AATVKQM++
Sbjct: 361  QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420

Query: 1187 EKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIK 1008
            EKKS + RPLN+AAEKDRLRR LE+A+   DEAEVERIK RL++LEASR+  EKD+KA++
Sbjct: 421  EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480

Query: 1007 LAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXX 828
            LAEMNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYYV            
Sbjct: 481  LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540

Query: 827  XXXXXXXAETLIVKNGGG---AVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYM 657
                       ++ +G G                        GKLVDT APVD+GTES M
Sbjct: 541  NGDRIG-----VIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNM 595

Query: 656  LHNFELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKR 480
            LH+FE+PISL  LQ+FGGP+GA AG+MARKQ +EA  G +VP+ DGRRH LTLTVSDYKR
Sbjct: 596  LHDFEIPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKR 655

Query: 479  RRGLL 465
            RRGLL
Sbjct: 656  RRGLL 660


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  627 bits (1617), Expect = e-177
 Identities = 356/661 (53%), Positives = 430/661 (65%), Gaps = 30/661 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLE LLLEAAGRT                                     GYSSRKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLSK 2007
             SQVPLKKRLDP                                   LYK+EDDR KL++
Sbjct: 61   GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 2006 LTELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG- 1845
            ++ELEREMIL  RA K+ D++LTE+++ ++  +R     K +PP   +R +R+ A  A  
Sbjct: 121  MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180

Query: 1844 ------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXX 1722
                  AL+EL  RR            R++++ GSG R +SP+KR+ F +A+L+S     
Sbjct: 181  AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240

Query: 1721 XXXXXXXXXXXXXXG-LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 1545
                          G +ADSDDD     S+ PTF+DIREITIRRSKLAKWFMEP+F+ELI
Sbjct: 241  ESRSHSEDEGSTGDGGMADSDDDG-EPGSQGPTFDDIREITIRRSKLAKWFMEPWFEELI 299

Query: 1544 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1365
            VGCFVRVGIG+S+SGPIYRLC+VRNVDA DPDR YK +NKTT+KYLNV+WGN+SSAARWQ
Sbjct: 300  VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359

Query: 1364 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1185
            MAMISDS P ++E+ QW+REVERSGG +P+KQ++L+KK+AI+K NT+VY AATVKQM++E
Sbjct: 360  MAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQE 419

Query: 1184 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1005
            KKSA+ RPLNVAAEKDRLRR LEVA+  +D+AEVERI+ R++ELEASR+   KD+KAI+L
Sbjct: 420  KKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479

Query: 1004 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 825
            AEMNR+NR ENF+NASEL+PVN  LKAGEAGYDPFSRRWTRSRNYYV             
Sbjct: 480  AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATN 539

Query: 824  XXXXXXAETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNF 645
                              V                   GKLVDT APVDQGTES  LHNF
Sbjct: 540  NEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHNF 599

Query: 644  ELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGL 468
            ELPISLT LQKFGG +GAQAG+MARKQ +EA  G +V + D +RH LTLTVSDYKRRRGL
Sbjct: 600  ELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGL 659

Query: 467  L 465
            L
Sbjct: 660  L 660


>ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
            gi|561032714|gb|ESW31293.1| hypothetical protein
            PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  625 bits (1612), Expect = e-176
 Identities = 354/660 (53%), Positives = 429/660 (65%), Gaps = 29/660 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLE LLLEAAGRT                                      Y+SRKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLSK 2007
             SQVPLKKRLDP+                                  LYKDEDDR KLS+
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120

Query: 2006 LTELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG- 1845
            +TEL+REMIL  RATK+ D++L  K+  K+ KG+    RK SPP + +R MR+ A  A  
Sbjct: 121  MTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRASARSADR 179

Query: 1844 -----ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXX 1716
                 AL+EL  +R            RE+++    + +SP KR+ F + +L+S       
Sbjct: 180  SAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSESE 239

Query: 1715 XXXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIV 1542
                           + DSDDD+    S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELIV
Sbjct: 240  SRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIV 299

Query: 1541 GCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQM 1362
            GCFVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQM
Sbjct: 300  GCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQM 359

Query: 1361 AMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEK 1182
            AM+SDS PL+EEF QW++EV+RSGG +P+KQ+VL+KK AIQK  T+VY AATVKQM++EK
Sbjct: 360  AMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEK 419

Query: 1181 KSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLA 1002
            KSA+ RPLNVAAEKDRLRR LE+A+   DEAEV+RIK RL+ELEASR   +KD+KA+KLA
Sbjct: 420  KSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALKLA 479

Query: 1001 EMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXX 822
            EMNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYY               
Sbjct: 480  EMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAAGNNSVNGI 539

Query: 821  XXXXXAETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNFE 642
                        + G  V                   GKLVDT APVDQGTES MLHNFE
Sbjct: 540  VAGPG-----TNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFE 594

Query: 641  LPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKV-PDDGRRHPLTLTVSDYKRRRGLL 465
            LPISL +LQK+GG +GAQAG+MARKQ +E+  G +V  +DGRRH LTL+VSDYKRRRGLL
Sbjct: 595  LPISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 654


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  624 bits (1610), Expect = e-176
 Identities = 352/658 (53%), Positives = 429/658 (65%), Gaps = 27/658 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MA+LE LLLEAAGRT                                     GY++RKPS
Sbjct: 1    MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1998
             SQVPLKKRLDP                               DLYKD+DDR KL+++TE
Sbjct: 61   GSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSDLYKDDDDRRKLAEMTE 120

Query: 1997 LEREMILEARATKRSDRDLTEKLKKR---KG---QDRKGSP-PKAPTRSMRSKAERAGAL 1839
            L+REMIL  RA+K+ D++L EKL+ +   KG   Q RK +P P +  RS    A+RA A 
Sbjct: 121  LQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSADRAAAK 180

Query: 1838 DELVK----------------RRRESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXXXX 1710
            D+ +                 + R++++GGSG R     KR+S+ A +L+S         
Sbjct: 181  DDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDSESE 240

Query: 1709 XXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 1536
                         + DSDD++    S+  TF+DI+E+T+RRSKLAKW MEP+F+ELIVGC
Sbjct: 241  SQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEELIVGC 300

Query: 1535 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 1356
            FVRVGIG+S+SGPIYRLC+VRNVDA++PDRQYK DNK THKYLNVVWGN++SAARWQMAM
Sbjct: 301  FVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARWQMAM 360

Query: 1355 ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 1176
            +SDS P +EEF QW+REVERSGG +P+K ++LDKK++I+K NT+VY AATVKQM++EKKS
Sbjct: 361  VSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQEKKS 420

Query: 1175 ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 996
            A+ RPLN+A EKDRLRR LEVA+   DE EV+RIKTRL+ELEASR+  + D+KAI+LAEM
Sbjct: 421  ASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIRLAEM 480

Query: 995  NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXX 816
            NR+NRVENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYYV                
Sbjct: 481  NRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGANAGN 540

Query: 815  XXXAETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNFELP 636
               +         G V                   GKLVDT APVDQGT S MLHNFELP
Sbjct: 541  NGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHNFELP 600

Query: 635  ISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 465
            ISL+VLQKFGGP+GAQAG+MARKQ +EA  G +VP+ DGRRH LTL+V DYKRRRGLL
Sbjct: 601  ISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658


>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 658

 Score =  613 bits (1580), Expect = e-172
 Identities = 356/665 (53%), Positives = 428/665 (64%), Gaps = 34/665 (5%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSSRKP 2181
            MADLE LLLEAAGRT                                       Y SRKP
Sbjct: 1    MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60

Query: 2180 SASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLS 2010
            S SQVPLKKRLDP                                   LYKDEDDR KLS
Sbjct: 61   SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDRRKLS 120

Query: 2009 KLTELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG 1845
            +++EL+REMIL  RA+K+ D+ L  K+  K+ KG+     K SPP + +R MR+ A  A 
Sbjct: 121  EMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSR-MRASARSAD 179

Query: 1844 ------ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXX 1719
                  AL+EL  +R            RE+++    +R+SP KR+SF +A L+S      
Sbjct: 180  RSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHSDS 239

Query: 1718 XXXXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 1545
                            +ADSDDD+  + S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELI
Sbjct: 240  DSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELI 299

Query: 1544 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1365
            VGCFVRVGIG+S++GPIYRLC+V+NVD++DPDRQYK +N+TTHKYLNVVWGN+SSAARWQ
Sbjct: 300  VGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAARWQ 359

Query: 1364 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1185
            MAM+SDS PL+EEF QW++EVERSGG +P+KQ+VL+KK AIQK  T+VY A TVKQM++E
Sbjct: 360  MAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQMLQE 419

Query: 1184 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1005
            KKS++ RPLNVAAEKDRLRR +E+A+   DEAEVERIKTR++ELEASR    KD+KA+KL
Sbjct: 420  KKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEASRHAKVKDAKALKL 479

Query: 1004 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 825
            AEMNR+NR ENFKNASELRPVN GLKAGEAGYDPFSRRWTRSRNYYV             
Sbjct: 480  AEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYV------AKPGEKA 533

Query: 824  XXXXXXAETLIVKNG----GGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYM 657
                     L+   G    G  V                   GKLVDT APVDQGTES  
Sbjct: 534  AARKNTTNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESNF 593

Query: 656  LHNFELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKR 480
            LHNFELPISL +L K+GG +GAQAG+MARKQ +EA  G +V + DGRRH LTL+V DYKR
Sbjct: 594  LHNFELPISLALLHKYGGAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYKR 653

Query: 479  RRGLL 465
            RRGLL
Sbjct: 654  RRGLL 658


>ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
            gi|462413781|gb|EMJ18830.1| hypothetical protein
            PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  609 bits (1570), Expect = e-171
 Identities = 348/654 (53%), Positives = 420/654 (64%), Gaps = 23/654 (3%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLE LLLEAAGRT                                     GY+SRKPS
Sbjct: 1    MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDREKLSKL 2004
             +QVPLKKRLDP                                  LYKDEDDR KL+++
Sbjct: 61   GTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEM 120

Query: 2003 TELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSKAERAGALDELV- 1827
            +EL+RE+IL  RA K+ D+ L EK + +K        P +  RS    A+RA A D+ + 
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKK---ETPPLPSSRVRSSARSADRAAAKDDALN 177

Query: 1826 ---------------KRRRESAKGGSGKR-YSPVKRRSFAAA--TLNSPXXXXXXXXXXX 1701
                           ++ R++++G SG R +S + R+SF A   + +S            
Sbjct: 178  ELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQSDSDSRSHSED 237

Query: 1700 XXXXXXXGLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVG 1521
                    + DSDD++    S+  TF+DI+EITIRRSKLAKW MEP+F+ELIVGCFVRVG
Sbjct: 238  DGSTGEDPMMDSDDER----SEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVG 293

Query: 1520 IGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSP 1341
            IG+S+SGPIYRLC+VRNVDA+DPDR+YK +NKTTHKYLNVVWGN++SAARWQMAMISDS 
Sbjct: 294  IGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSA 353

Query: 1340 PLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKSATWRP 1161
            PL+EEF QW+REVERSGG LPSKQ+VL+KK+AI+K NT+VY AATVKQM++EKKSA+ RP
Sbjct: 354  PLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRP 413

Query: 1160 LNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEMNRRNR 981
            LN+A EKDRLRR LEVA+   D+AEVERIKTRL++LEA R+   KDSKA++LAEMNR+NR
Sbjct: 414  LNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRLAEMNRKNR 473

Query: 980  VENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXAE 801
            VENFKNASEL+PV  GLKAGEAGYDPFSRRWTRSRNYYV                     
Sbjct: 474  VENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALA 533

Query: 800  TLIVKNGGGAV-FXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNFELPISLT 624
              I  NG   V                    GKL+DT APVD GTES ++HNFELPISL 
Sbjct: 534  D-IESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLA 592

Query: 623  VLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 465
             LQKFGGP+GAQ G++ARKQ +EA  G +VP+ DGRRH LTLTVSDYKRR GLL
Sbjct: 593  TLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus]
          Length = 660

 Score =  604 bits (1557), Expect = e-170
 Identities = 346/661 (52%), Positives = 423/661 (63%), Gaps = 30/661 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLE LLLEAAGRT                                     GY+SRKPS
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLSK 2007
             SQVPLKKRLDP                                   LYKD+DDR KL+ 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 2006 LTELEREMILEARATKRSDRDLTEKLKKR--KGQD---RKGSPP--KAPTRSMRSKAERA 1848
            ++EL+REMIL  RA+K++D+ L E L+ +  KG+    RK +PP   +  RS    A+RA
Sbjct: 121  MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 1847 GALDELV----------------KRRRESAKGGSG-KRYSPVKRRSFAAATLNSPXXXXX 1719
             A D+ +                ++ R++++G +  +R+SP KR+ F A +L+S      
Sbjct: 181  AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 1718 XXXXXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 1545
                            + DSDD++    S  PTFEDI+E+TIRRSKLAKW MEP+F+ELI
Sbjct: 241  ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 1544 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1365
            VGCFVRVGIG+SRSGPIYRLC+VRNVDAT+PDRQYK +NK THKYLNV+WGN++SAARWQ
Sbjct: 301  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 1364 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1185
            MAM+SDS PL++E+ QW++EVER+GG + SKQ++L+KK+AIQK N +VY AATVKQM+++
Sbjct: 361  MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 1184 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1005
            KKSA+ RPLN+AAEKDRLRR ++VA    DEAEVERIKTRL++LEASRR+  KD+KAI+L
Sbjct: 421  KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 1004 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 825
            AEMNR+NRVENFKNASELRP+   LKAGEAGYDPFSRRWTRSRNYYV             
Sbjct: 481  AEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 539

Query: 824  XXXXXXAETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNF 645
                     L                            GKLVDT APVD GTES  LHNF
Sbjct: 540  GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 599

Query: 644  ELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGL 468
            ELPISL +LQKFGG  GAQAG++ARKQ +EA  G +VP+ DGRRH LTLTVSDYKRRRGL
Sbjct: 600  ELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 659

Query: 467  L 465
            L
Sbjct: 660  L 660


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  599 bits (1544), Expect = e-168
 Identities = 343/663 (51%), Positives = 425/663 (64%), Gaps = 32/663 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSSRKP 2181
            MADLE LLLEAAGRT                                       Y++RKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 2180 SASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLS 2010
            S SQVPLKKRL+                                    LYKDEDDR+KL+
Sbjct: 61   SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120

Query: 2009 KLTELEREMILEARATKRSDRDLTEKLKKRKGQD-----RKGSPPKAPTRSMRSKAERAG 1845
            +++EL+RE+IL  RA K+ D+ LTEK++ ++  D     RK +PP   +R +RS A  A 
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 1844 -------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXX 1725
                   AL+EL  +R            R+ ++G +G R +S VK+ +F +A+L+S    
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSE 240

Query: 1724 XXXXXXXXXXXXXXXG-LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDEL 1548
                           G +ADSD+D +   SK PT+EDI+EITIRR+KLAKWFMEP+F+EL
Sbjct: 241  SGSRSHSEDEGSTGDGGMADSDED-VEPGSKGPTYEDIKEITIRRTKLAKWFMEPWFEEL 299

Query: 1547 IVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARW 1368
            I+GCFVRVGIG+S+SGP+YRLC+VRNVDA +PD+ YK +NK+T+KYLNV WG D+SAARW
Sbjct: 300  IIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARW 359

Query: 1367 QMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVK 1188
            QMAM+SDS P +EE+ QW+REVE  GG LPSKQ++L+KK+AI+K NT+VY AATVKQM++
Sbjct: 360  QMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQ 419

Query: 1187 EKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIK 1008
            EKKSA+ RPLNVAAEKDRLRR LE+A+   DEAEVERI  R++ELEASR    KD+KAI+
Sbjct: 420  EKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAKAIR 479

Query: 1007 LAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXX 828
            LAEMNR+NRVENF+NASE++PVN GLKAGEAGYDPFSRRWTRSRNYYV            
Sbjct: 480  LAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVAT 539

Query: 827  XXXXXXXAETLIVKNGGGA-VFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLH 651
                      +   N   A V                   GKLVDT APVDQGTES  +H
Sbjct: 540  KISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTESNTMH 599

Query: 650  NFELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRR 474
            +FEL ISL  LQ+FGGP+GAQAG+MARKQ +EA  G +VP+ DGRRH LTLTV DYKRRR
Sbjct: 600  SFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRR 659

Query: 473  GLL 465
            GLL
Sbjct: 660  GLL 662


>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 653

 Score =  597 bits (1538), Expect = e-167
 Identities = 348/663 (52%), Positives = 422/663 (63%), Gaps = 32/663 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLEKLLLEAAGR                                       Y  RKPS
Sbjct: 1    MADLEKLLLEAAGRNIHSLTPSRRKRRGEFLDGGSDSGDDDSDDDGDDHG---YRGRKPS 57

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1998
            A+QVPLKKR + +                               LYKDEDDR+KLS++TE
Sbjct: 58   ATQVPLKKRFETSGKDDDVSGDDDGSDREGDSSEDSDVGDD---LYKDEDDRQKLSEMTE 114

Query: 1997 LEREMILEARATKRSDRDLTEKL--KKRKGQ----DRKGSPP--------KAPTRSMRSK 1860
            L+REMIL  RA+K+ D+D   K+  K+ KG      R+ SPP        +A  RS    
Sbjct: 115  LQREMILSDRASKKDDKDFLGKIASKREKGAKATLSRRESPPPPLLSSRVRASARSADRS 174

Query: 1859 AERAGALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXX 1716
            A + GAL+EL  +R            +E +K G G+    +K + FA+  L+S       
Sbjct: 175  AAKDGALNELRAKRLKQLDPEAKLKLKEGSKSG-GRGLFSLKGKPFASTGLSSSSHSDSD 233

Query: 1715 XXXXXXXXXXXXG--LADSDDDKISAES--KVPTFEDIREITIRRSKLAKWFMEPYFDEL 1548
                           + DSDDD+I   S  +VP+FEDI+EITIRRSKLAKWFMEP+F+EL
Sbjct: 234  SRSRSDDEGSNGDGGIIDSDDDRIMTGSGFEVPSFEDIKEITIRRSKLAKWFMEPFFEEL 293

Query: 1547 IVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARW 1368
            IVGCFVRVGIG+S++GPIYRLC+V+NVDA+DPDRQYK DNKTT+KYLNVVWGN++SAARW
Sbjct: 294  IVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRQYKLDNKTTYKYLNVVWGNETSAARW 353

Query: 1367 QMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVK 1188
            QMAM+SDSPPL+EEF QW++EVERSGG +  K +V++K  AIQK N++VY AATVKQM++
Sbjct: 354  QMAMVSDSPPLEEEFKQWVKEVERSGGRMLMKLDVMEKNQAIQKINSFVYSAATVKQMIE 413

Query: 1187 EKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIK 1008
            EKKS + RPLNVAAEKDRL+R LE+A+  KD AEVE+IKTRL+ELEASR+   KD+KA++
Sbjct: 414  EKKSNSRRPLNVAAEKDRLKRQLEIAESKKDAAEVEKIKTRLQELEASRKTQAKDAKALR 473

Query: 1007 LAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXX 828
            L+EMNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYY             
Sbjct: 474  LSEMNRKNRFENFKNASELKPVNKGLKAGEAGYDPFSRRWTRSRNYYNAKQAEEAAAGNN 533

Query: 827  XXXXXXXAETLIVKNGGGA-VFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLH 651
                          NG GA V                   GKLVDTRAPVDQGTES  LH
Sbjct: 534  SSGGAVGDRG---SNGVGATVAGEAGVVATAEALEAAADAGKLVDTRAPVDQGTESNFLH 590

Query: 650  NFELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRR 474
            NFELPISLT+LQKFGG +G  AG++A+KQ +E   G +VP+ DG+ H LTLTVSDYKRRR
Sbjct: 591  NFELPISLTILQKFGGAQGVHAGFIAKKQRIEEIVGFRVPENDGKSHMLTLTVSDYKRRR 650

Query: 473  GLL 465
            GLL
Sbjct: 651  GLL 653


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 657

 Score =  593 bits (1528), Expect = e-166
 Identities = 342/669 (51%), Positives = 420/669 (62%), Gaps = 38/669 (5%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADL+ LLLEAAGRT                                     GY+SRKPS
Sbjct: 1    MADLDDLLLEAAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDREKLSKL 2004
             SQVPLKKRLDP+                                 LYKDE+DR KL+++
Sbjct: 61   GSQVPLKKRLDPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSDLYKDENDRRKLAEM 120

Query: 2003 TELEREMILEARATKRSDRDLTEKLKKR--KG---QDRKGSPP--KAPTRSMRSKAERAG 1845
            +EL+RE+IL  RA K+ D+ L EK + +  KG   Q RK +PP   +  RS    A+RA 
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSADRAA 180

Query: 1844 ALDELV----------------KRRRESAKGGSG-KRYSPVKRRSFAAATLNSPXXXXXX 1716
            A D+ +                ++ R+ ++G  G K +S   ++SF+A   +S       
Sbjct: 181  AKDDALNELRAKRLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSSSQSDSE 240

Query: 1715 XXXXXXXXXXXXGLADSDDDKISAESKVP----------TFEDIREITIRRSKLAKWFME 1566
                          + SDDD  SA+  +           TFEDI+EITIRRS+LAKW ME
Sbjct: 241  SR------------SHSDDDGSSADDAIDSDDERGNQGLTFEDIKEITIRRSRLAKWLME 288

Query: 1565 PYFDELIVGCFVRVGIGKSRSG-PIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGN 1389
            P+F+ELIVGC VRVGIGK++SG PIYRLC V NVD++DPDRQYK +NKTTHKYLNVVWGN
Sbjct: 289  PFFEELIVGCCVRVGIGKTKSGRPIYRLCSVCNVDSSDPDRQYKLENKTTHKYLNVVWGN 348

Query: 1388 DSSAARWQMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAA 1209
            ++SAARWQMAM+SDS PL+EE+DQW+REVE++GG LPSK++VL+KK+AI+K NT+VY A 
Sbjct: 349  ENSAARWQMAMVSDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAK 408

Query: 1208 TVKQMVKEKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLE 1029
            TVKQM++EKKSA+ RPLN+A EKDRLRR LE+A+   D+AEVERIK RL++LEA ++   
Sbjct: 409  TVKQMIQEKKSASSRPLNIALEKDRLRRELEIAQSKHDDAEVERIKARLEQLEARQQSQG 468

Query: 1028 KDSKAIKLAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXX 849
            KDSKA++LAEMNR+NRV+NFKNAS L+PV  GLKAGEAGYDPFSRRWTRSRNYYV     
Sbjct: 469  KDSKAVRLAEMNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDE 528

Query: 848  XXXXXXXXXXXXXXAETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGT 669
                             +     GG V                   GKL+DT APVDQGT
Sbjct: 529  QKDDAEANAVAAESLAEVETNGTGGVVAVRAGLEATAAALEAAAGAGKLIDTMAPVDQGT 588

Query: 668  ESYMLHNFELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVP-DDGRRHPLTLTVS 492
             S  LHNFELPISL  LQKFGGP+GAQ G+MARKQ +EA  GV+VP DDGRRH LTL+VS
Sbjct: 589  SSNPLHNFELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVS 648

Query: 491  DYKRRRGLL 465
            DYKRRRGLL
Sbjct: 649  DYKRRRGLL 657


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  592 bits (1526), Expect = e-166
 Identities = 341/667 (51%), Positives = 424/667 (63%), Gaps = 36/667 (5%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-YSSRKP 2181
            MADLE LLLEAAGRT                                       Y+SRKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60

Query: 2180 SASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD---LYKDEDDREKLS 2010
            S SQVPLKKRL+                                    LYKDEDDR+KL+
Sbjct: 61   SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120

Query: 2009 KLTELEREMILEARATKRSDRDLTEKLKKRKGQD-----RKGSPPKAPTRSMRSKAERAG 1845
            +++EL+RE+IL  RA K+ D+ LTEK++ ++  D     RK +PP   +R +RS A  A 
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 1844 -------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXX 1725
                   AL+EL  +R            R++++G +G R ++ VK+ +F +A L+S    
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSE 240

Query: 1724 XXXXXXXXXXXXXXXG---LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFD 1554
                           G   +ADSD+D     S+ PT+EDI+EITIRR+KLAKWFMEP+F+
Sbjct: 241  SESGSRSHSEDEGSTGDGGMADSDEDG-DPGSRGPTYEDIKEITIRRTKLAKWFMEPWFE 299

Query: 1553 ELIVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAA 1374
            ELI+GCFVRVGIG+S++GP+YRLC+VRNVDA +PD+ YK +NK+T+KYLNV WG DSSAA
Sbjct: 300  ELIIGCFVRVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAA 359

Query: 1373 RWQMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQM 1194
            RWQMAM+SDS P +EE+ QW+RE ER GG LPSKQ++L+KK+AI+K NT+VY AATVKQM
Sbjct: 360  RWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQM 419

Query: 1193 VKEKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKA 1014
            ++EKKSA+ RPLNVAAEKDRLRR LE+A+   DEAEVERI+ R+ ELEASR+   KD+KA
Sbjct: 420  LQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAKVKDAKA 479

Query: 1013 IKLAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXX 834
            ++LAEMNR+NRVENF+NASEL+P+N GLKAGEAGYDPFSRRWTRSRNYYV          
Sbjct: 480  LRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYV--SNPAGGDD 537

Query: 833  XXXXXXXXXAETLIVKNGGGAV---FXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTES 663
                      +T  V +    V                      GKLVDT APVDQGTES
Sbjct: 538  AVAASNSEANDTAAVADSDHVVAGAMSESGVAATAAALDAAADAGKLVDTSAPVDQGTES 597

Query: 662  YMLHNFELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKV-PDDGRRHPLTLTVSDY 486
              +HNFEL ISL  LQKF GP+GA AG+MARKQ +EAN G +V  +DGRRH LTLTV DY
Sbjct: 598  NTMHNFELEISLIALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALTLTVGDY 657

Query: 485  KRRRGLL 465
            KRRRGLL
Sbjct: 658  KRRRGLL 664


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  587 bits (1514), Expect = e-165
 Identities = 340/658 (51%), Positives = 412/658 (62%), Gaps = 27/658 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLE LLLEAAGRT                                      Y SRKPS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG--YGSRKPS 58

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1998
             SQVPLKKRLDPA                                  +E D +   ++TE
Sbjct: 59   GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 1997 LEREMILEARATKRSDRDLTEKLKKRKGQ----DRKGSPPKAPTRSMR---SKAERAGAL 1839
            LEREM++  R  K+ D++L +K + R+ +      K +PP   +RS R     A+RA A 
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 1838 DELV----------------KRRRESAKGGSGKRY-SPVKRRSFAAATLNSPXXXXXXXX 1710
            D+ +                +R R++++GGSG R  SPVKR++F  A L+S         
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 1709 XXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 1536
                         +ADSDDD      + PT++DI+EITIRRSKLAKWFMEP+F+ELIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 1535 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 1356
            FVRVGIG+S++GPIYRLC+VRNVDAT+PDR YK +N+TT KYLNV WGN+SSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 1355 ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 1176
            +SDSPPL+EEF QW+REVER+GG +PSKQ+VL+KK++IQK NT+VY AATVKQM++EKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKS 409

Query: 1175 ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 996
            A+ RPLNVAAEKDRLRR LEVA+   D+ ++ERIK RL+ELEASR    KD+KAI+LAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 995  NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXX 816
            NR+NRVENFKNASEL+ VN  LKAGEAGYDPFSRRWTRSRNYY+                
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKN 529

Query: 815  XXXAETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNFELP 636
                      NG                       GKLVDT AP+D GTES MLH+FEL 
Sbjct: 530  GVPGGA----NGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELD 585

Query: 635  ISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 465
            ISL  L+KFGGP+G  AG+MARKQ +EA  G +VP+ DGRRH LTLTV DYKRRRGLL
Sbjct: 586  ISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  586 bits (1511), Expect = e-164
 Identities = 340/658 (51%), Positives = 410/658 (62%), Gaps = 27/658 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            MADLE LLLEAAGRT                                      Y SRKPS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG--YGSRKPS 58

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDREKLSKLTE 1998
             SQVPLKKRLDP                                   +E D +   ++TE
Sbjct: 59   GSQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 1997 LEREMILEARATKRSDRDLTEKLKKRKGQ----DRKGSPPKAPTRSMR---SKAERAGAL 1839
            LEREM++  R  K+ D++L +K + R+ +      K +PP   +RS R     A+RA A 
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 1838 DELV----------------KRRRESAKGGSGKRY-SPVKRRSFAAATLNSPXXXXXXXX 1710
            D+ +                +R R++++GGSG R  SPVKR++F  A L+S         
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 1709 XXXXXXXXXXG--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 1536
                         +ADSDDD      + PT++DI+EITIRRSKLAKWFMEP+F+ELIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 1535 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 1356
            FVRVGIG+S++GPIYRLC+VRNVDAT+PDR YK +N+TT KYLNV WGN+SSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 1355 ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 1176
            +SDSPPL+EEF QW+REVER+ G +PSKQ+VL+KKD+IQK NT+VY AATVKQM++EKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKS 409

Query: 1175 ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 996
            A+ RPLNVAAEKDRLRR LEVA+   DE ++ERIK RL+ELEASR    KD+KAI+LAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 995  NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXX 816
            NR+NRVENFKNASEL+ VN  LKAGEAGYDPFSRRWTRSRNYY+                
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKN 529

Query: 815  XXXAETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNFELP 636
                      NG                       GKLVDT AP+D GTES MLH+FEL 
Sbjct: 530  GVPGGA----NGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELD 585

Query: 635  ISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGLL 465
            ISL  L+KFGGP+G  AG+MARKQ +EA  G +VP+ DGRRH LTLTV DYKRRRGLL
Sbjct: 586  ISLNALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
            gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17
            [Arabidopsis lyrata subsp. lyrata]
          Length = 643

 Score =  573 bits (1476), Expect = e-160
 Identities = 330/661 (49%), Positives = 416/661 (62%), Gaps = 30/661 (4%)
 Frame = -1

Query: 2357 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYSSRKPS 2178
            M DLE LLLEAAGRT                                      Y+SRKPS
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGSSDSRDDSDEDRG---YASRKPS 57

Query: 2177 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-LYKDEDDREKLSKLT 2001
             SQVPLKKRL+                                D LYK+E+DR+KL+ +T
Sbjct: 58   GSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 117

Query: 2000 ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 1845
            E +REMIL  RA K+ D++ TEKL+ ++  ++     K + P   +R +RS A  A    
Sbjct: 118  EFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRAA 177

Query: 1844 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 1716
                AL+EL  +R            R+++KGGSG R +S +KR+  A++ L+S       
Sbjct: 178  AKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSMKRKPLASSNLSSSSQSDSD 237

Query: 1715 XXXXXXXXXXXXGLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 1536
                        G+ DSDDD+    S VPTFED++EITIRRSKLAKW MEP+F+ELIVGC
Sbjct: 238  SRSQSDDEGSNAGMLDSDDDR----SDVPTFEDVKEITIRRSKLAKWLMEPFFEELIVGC 293

Query: 1535 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 1356
            FVRVGIG+S+SGPIYRLC V+NVDATDPD+ YK +NKTTHKYLNVVWGN++SAARWQMAM
Sbjct: 294  FVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAM 353

Query: 1355 ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 1176
            ISD  PL+EE+ QW+REVER+ G +P+KQ++ +KK+AIQ+ N++VY A TVKQM++EKKS
Sbjct: 354  ISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRINSFVYSAETVKQMLQEKKS 413

Query: 1175 ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 996
            A+ RP+NVAAEKDRLR+ LE+A+   DEA VERIKT++K+L+ASR     D KA+KLAEM
Sbjct: 414  ASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQLDASRNKKGVDKKALKLAEM 473

Query: 995  NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXX 816
            N++NR ENFKNASE++ ++A LKAGEAGYDPFSRRWTRS NYY                 
Sbjct: 474  NKKNRAENFKNASEVKSISASLKAGEAGYDPFSRRWTRSSNYY---------NGKNKGKD 524

Query: 815  XXXAETLI---VKNGGGAVFXXXXXXXXXXXXXXXXXXGKLVDTRAPVDQGTESYMLHNF 645
                ET +   V+  G  V                   GKL+DTRAP+ QG E   LHNF
Sbjct: 525  GEENETAVAAAVETNGADV--GAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNF 582

Query: 644  ELPISLTVLQKFGGPKGAQAGYMARKQMVEANHGVKVPD-DGRRHPLTLTVSDYKRRRGL 468
            EL +SLT LQK+GGP+G Q  +MARKQ+ EA  G +V + DG+RH LTLTVSDYKRRRGL
Sbjct: 583  ELSLSLTALQKYGGPQGVQKAFMARKQVTEATVGCRVAENDGKRHGLTLTVSDYKRRRGL 642

Query: 467  L 465
            L
Sbjct: 643  L 643