BLASTX nr result
ID: Mentha28_contig00010957
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00010957
(482 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU44999.1| hypothetical protein MIMGU_mgv1a013841mg [Mimulus... 259 3e-67
gb|EYU44998.1| hypothetical protein MIMGU_mgv1a014911mg [Mimulus... 226 3e-57
ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 225 4e-57
ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 225 4e-57
ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 225 6e-57
ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 223 3e-56
ref|XP_007040587.1| Translation elongation factor EF1B/ribosomal... 220 1e-55
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin... 220 1e-55
ref|XP_002518855.1| structural constituent of ribosome, putative... 219 2e-55
ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin... 219 3e-55
gb|EXC14469.1| 30S ribosomal protein S6 alpha [Morus notabilis] 218 5e-55
ref|XP_007160190.1| hypothetical protein PHAVU_002G300600g [Phas... 218 5e-55
gb|AFK44002.1| unknown [Lotus japonicus] 218 9e-55
ref|XP_004166401.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 215 5e-54
ref|XP_004143860.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 215 5e-54
sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alp... 214 1e-53
ref|XP_002297965.2| hypothetical protein POPTR_0001s10930g [Popu... 213 2e-53
ref|XP_002886339.1| ribosomal protein S6 family protein [Arabido... 213 2e-53
ref|XP_004300500.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 211 7e-53
ref|XP_006476347.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 211 1e-52
>gb|EYU44999.1| hypothetical protein MIMGU_mgv1a013841mg [Mimulus guttatus]
Length = 209
Score = 259 bits (662), Expect = 3e-67
Identities = 127/154 (82%), Positives = 139/154 (90%), Gaps = 2/154 (1%)
Frame = +1
Query: 4 TAVKAEFDLAFFERDLEGGDAPP--EIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDM 177
T KA+FD+AFFERDL G D+PP IP AGFPE E+KEEPQCPPGLRKYE+MVVLRPDM
Sbjct: 56 TPAKAQFDIAFFERDLGGSDSPPMPTIPEAGFPEMEDKEEPQCPPGLRKYESMVVLRPDM 115
Query: 178 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 357
SEDERL FTQKYEELLVAGGGMYVEVFNRGVIPLAY I+KKNKAGE+NTY+DGI+LLFTY
Sbjct: 116 SEDERLAFTQKYEELLVAGGGMYVEVFNRGVIPLAYGIRKKNKAGESNTYLDGIYLLFTY 175
Query: 358 FTNPQSIELLSETLLADDEVIRSSSFKIRKRKLF 459
FT P SI +L +TLLADDEVIRSS+FKIRKRKLF
Sbjct: 176 FTKPDSITVLEDTLLADDEVIRSSTFKIRKRKLF 209
>gb|EYU44998.1| hypothetical protein MIMGU_mgv1a014911mg [Mimulus guttatus]
Length = 174
Score = 226 bits (576), Expect = 3e-57
Identities = 112/147 (76%), Positives = 125/147 (85%), Gaps = 2/147 (1%)
Frame = +1
Query: 16 AEFDLAFFERDLEGGDAPP--EIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMSEDE 189
A FD++FFER+L GG APP EIP GFPE +K EPQCPPGLR YETMVVLRPDMSEDE
Sbjct: 22 ALFDISFFERELGGGAAPPTPEIPETGFPEMGDKVEPQCPPGLRTYETMVVLRPDMSEDE 81
Query: 190 RLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYFTNP 369
RL FT KY +LLVAGGG V VFN+GVIPLAY I+KKN+AGE+NTY+DGI+LLFTYFT P
Sbjct: 82 RLNFTHKYNQLLVAGGGTNVTVFNKGVIPLAYGIRKKNRAGESNTYLDGIYLLFTYFTKP 141
Query: 370 QSIELLSETLLADDEVIRSSSFKIRKR 450
SI +L ETLLADDEVIRSS+FKIRKR
Sbjct: 142 DSITVLEETLLADDEVIRSSTFKIRKR 168
>ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cicer arietinum]
Length = 196
Score = 225 bits (574), Expect = 4e-57
Identities = 113/151 (74%), Positives = 123/151 (81%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMS 180
V A +F +FFE + GD P PG GF EEKEEPQCPPGLR+YETM VLRPDMS
Sbjct: 46 VNAQTLDFTGSFFEGGIGSGD-DPITPGTGFAAVEEKEEPQCPPGLRQYETMAVLRPDMS 104
Query: 181 EDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYF 360
EDERL FTQKYEELLVAGGGMY+EVFNRGVIPLAYSIKKKNK GE+NTYMDGI+LLFTYF
Sbjct: 105 EDERLAFTQKYEELLVAGGGMYIEVFNRGVIPLAYSIKKKNKEGESNTYMDGIYLLFTYF 164
Query: 361 TNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
T P+SI L TLLADD V+RS+S KIRKRK
Sbjct: 165 TKPESITALEATLLADDNVVRSTSVKIRKRK 195
>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
vinifera]
Length = 199
Score = 225 bits (574), Expect = 4e-57
Identities = 110/151 (72%), Positives = 124/151 (82%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMS 180
+ A+ +F +FFE D P PG G E+K+EPQCPPGLR+YETM VLRPDMS
Sbjct: 48 IRALTLDFSGSFFEGGFGSDDDPNSPPGPGIAAVEDKDEPQCPPGLRQYETMAVLRPDMS 107
Query: 181 EDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYF 360
EDERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE+NTY+DGI+LLFTYF
Sbjct: 108 EDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLFTYF 167
Query: 361 TNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
T P+S+E+L TL ADD+VIRSSSFKIRKRK
Sbjct: 168 TKPESMEVLEATLTADDDVIRSSSFKIRKRK 198
>ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum lycopersicum]
Length = 196
Score = 225 bits (573), Expect = 6e-57
Identities = 112/147 (76%), Positives = 124/147 (84%), Gaps = 2/147 (1%)
Frame = +1
Query: 19 EFDLAFFERDLEGGDA--PPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMSEDER 192
EF +FFE GG+A PP P +G E+KEEPQCPPGLR YETMVVLRPDMSEDER
Sbjct: 49 EFSGSFFEGGFGGGNADEPPTTPWSGISAVEDKEEPQCPPGLRPYETMVVLRPDMSEDER 108
Query: 193 LTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYFTNPQ 372
L TQKYEELLVAGGGMYVEVFNRGVIPLAYSI++KNKAGETNTY+DGI+LLFTYFT P+
Sbjct: 109 LALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPE 168
Query: 373 SIELLSETLLADDEVIRSSSFKIRKRK 453
SI L TL+ADD+VIRSS+FKIRKRK
Sbjct: 169 SIVALEATLVADDDVIRSSTFKIRKRK 195
>ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum tuberosum]
Length = 196
Score = 223 bits (567), Expect = 3e-56
Identities = 111/147 (75%), Positives = 123/147 (83%), Gaps = 2/147 (1%)
Frame = +1
Query: 19 EFDLAFFERDLEGGDA--PPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMSEDER 192
EF +FFE GG+A PP P +G E+KEEPQCPPGLR YETMVVLRPDMSEDER
Sbjct: 49 EFSGSFFEGGFGGGNADEPPTTPWSGISAVEDKEEPQCPPGLRPYETMVVLRPDMSEDER 108
Query: 193 LTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYFTNPQ 372
L TQKYEELLVAGGGMYVEVFNRGVIPLAYSI++KNKAGETNTY+DGI+LLFTYFT P+
Sbjct: 109 LALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPE 168
Query: 373 SIELLSETLLADDEVIRSSSFKIRKRK 453
SI L TL+ DD+VIRSS+FKIRKRK
Sbjct: 169 SIVPLEATLVTDDDVIRSSTFKIRKRK 195
>ref|XP_007040587.1| Translation elongation factor EF1B/ribosomal protein S6 family
protein [Theobroma cacao] gi|508777832|gb|EOY25088.1|
Translation elongation factor EF1B/ribosomal protein S6
family protein [Theobroma cacao]
Length = 337
Score = 220 bits (561), Expect = 1e-55
Identities = 108/151 (71%), Positives = 121/151 (80%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMS 180
V A +F +FFE D PP PG+G E+KEEPQCPPGLR+YETM+VLRPDMS
Sbjct: 186 VKARTLDFSGSFFEGGFGSDDDPPSQPGSGITALEDKEEPQCPPGLRQYETMMVLRPDMS 245
Query: 181 EDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYF 360
EDERL TQKYEELLVAGGGMYVEVFNRGV+PLAYSIKKKNKAGETNTY+DGI+LLFTYF
Sbjct: 246 EDERLALTQKYEELLVAGGGMYVEVFNRGVVPLAYSIKKKNKAGETNTYLDGIYLLFTYF 305
Query: 361 TNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
P+S+ L L DD+VIRSSSFK+RKRK
Sbjct: 306 MKPESMATLEVALNTDDDVIRSSSFKVRKRK 336
>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
gi|255628961|gb|ACU14825.1| unknown [Glycine max]
Length = 214
Score = 220 bits (561), Expect = 1e-55
Identities = 110/151 (72%), Positives = 120/151 (79%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMS 180
+ A +F +FFE D P G GF EEKEEPQCPPGLR+YETM+VLRPDMS
Sbjct: 63 IRAQTLDFSDSFFEGGFGSEDVPSSPGGPGFTAVEEKEEPQCPPGLRQYETMMVLRPDMS 122
Query: 181 EDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYF 360
EDERL TQKYEE+LVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTY+DGI+LLFTYF
Sbjct: 123 EDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTYF 182
Query: 361 TNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
T P+SI L ET+L DD VIRS S KIRKRK
Sbjct: 183 TKPESITPLEETMLTDDNVIRSMSSKIRKRK 213
>ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541842|gb|EEF43388.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 205
Score = 219 bits (559), Expect = 2e-55
Identities = 108/146 (73%), Positives = 122/146 (83%), Gaps = 1/146 (0%)
Frame = +1
Query: 19 EFDLAFFERDLEGGDA-PPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMSEDERL 195
+F +F+E G + PP + G+G E+KE PQCPPGLR+YETM VLRPDMSEDERL
Sbjct: 59 DFSGSFYEGSGFGSEEDPPTLTGSGMTAVEDKEPPQCPPGLRQYETMAVLRPDMSEDERL 118
Query: 196 TFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYFTNPQS 375
TQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTY+DGI+LLFTYFT P+S
Sbjct: 119 ALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPES 178
Query: 376 IELLSETLLADDEVIRSSSFKIRKRK 453
IE+L TL DD++IRSSSFKIRKRK
Sbjct: 179 IEMLEATLNTDDDIIRSSSFKIRKRK 204
>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
gi|255625673|gb|ACU13181.1| unknown [Glycine max]
Length = 214
Score = 219 bits (558), Expect = 3e-55
Identities = 110/151 (72%), Positives = 120/151 (79%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMS 180
+ A +F +FFE D P G GF EEKEEPQCPPGLR+YETM+VLRPDMS
Sbjct: 63 IRAQTLDFSDSFFEGGFGSEDDPSSPGGPGFTGVEEKEEPQCPPGLRQYETMMVLRPDMS 122
Query: 181 EDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYF 360
EDERL TQKYEE+LVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTY+DGI+LLFTYF
Sbjct: 123 EDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTYF 182
Query: 361 TNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
T P+SI L ET+L DD VIRS S KIRKRK
Sbjct: 183 TKPESITPLEETMLTDDNVIRSMSSKIRKRK 213
>gb|EXC14469.1| 30S ribosomal protein S6 alpha [Morus notabilis]
Length = 209
Score = 218 bits (556), Expect = 5e-55
Identities = 108/151 (71%), Positives = 122/151 (80%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMS 180
V A +F +FFE + + PP PG G E+KEEP+CPPGLR++ETMVVLRPDMS
Sbjct: 58 VKAQTLDFSGSFFEGGIVSDEDPPSPPGPGLAAVEDKEEPECPPGLRQFETMVVLRPDMS 117
Query: 181 EDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYF 360
E+ERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKN+AGETNTY+DGI+LLFTYF
Sbjct: 118 EEERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNRAGETNTYLDGIYLLFTYF 177
Query: 361 TNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
T P+SI L E L ADD+VIRS S KIRKRK
Sbjct: 178 TKPESIGPLEEMLKADDDVIRSMSLKIRKRK 208
>ref|XP_007160190.1| hypothetical protein PHAVU_002G300600g [Phaseolus vulgaris]
gi|561033605|gb|ESW32184.1| hypothetical protein
PHAVU_002G300600g [Phaseolus vulgaris]
Length = 214
Score = 218 bits (556), Expect = 5e-55
Identities = 106/151 (70%), Positives = 121/151 (80%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMS 180
+TA +F +FFE D P G GF EEKEEP CPPGLR+YETM+VLRPDM+
Sbjct: 63 ITAQTLDFSDSFFEGGFGSEDDPNSPGGTGFTAVEEKEEPPCPPGLRQYETMMVLRPDMT 122
Query: 181 EDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYF 360
EDERL TQKYEE+LVAGGGMYVEVFNRGVIPLAY+IKKKNKAGETNTY+DGI+LLFTYF
Sbjct: 123 EDERLALTQKYEEILVAGGGMYVEVFNRGVIPLAYAIKKKNKAGETNTYLDGIYLLFTYF 182
Query: 361 TNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
T P+S++ L ET+L DD V RS SFK+RKRK
Sbjct: 183 TKPESVKPLEETVLTDDNVFRSISFKVRKRK 213
>gb|AFK44002.1| unknown [Lotus japonicus]
Length = 209
Score = 218 bits (554), Expect = 9e-55
Identities = 110/151 (72%), Positives = 123/151 (81%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMS 180
V A +F +FFE L G + G G EEKEEPQCPPGLR+YETM VLRPDMS
Sbjct: 59 VKAQTLDFTDSFFEGGL-GSEDDLNSSGTGLTATEEKEEPQCPPGLRQYETMAVLRPDMS 117
Query: 181 EDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYF 360
EDERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTY+DGI+LL+TYF
Sbjct: 118 EDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLYTYF 177
Query: 361 TNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
T P+SI L ETLLADD+V+RS++FKI+KRK
Sbjct: 178 TKPESIVALEETLLADDDVLRSTTFKIKKRK 208
>ref|XP_004166401.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cucumis sativus]
Length = 222
Score = 215 bits (548), Expect = 5e-54
Identities = 109/147 (74%), Positives = 120/147 (81%), Gaps = 1/147 (0%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEA-EEKEEPQCPPGLRKYETMVVLRPDM 177
V A EF +FFE L D PP PG GF A EEKEEPQCPPGLRKYE+MVVLRPDM
Sbjct: 58 VKAQTLEFSGSFFEGGLGSQDEPPAPPGTGFATALEEKEEPQCPPGLRKYESMVVLRPDM 117
Query: 178 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 357
SEDERL FT+KYEELLVAGG MYVEVFN+G+IPLAYSIKKKNKAGETNTY+DGI LLFTY
Sbjct: 118 SEDERLAFTEKYEELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTY 177
Query: 358 FTNPQSIELLSETLLADDEVIRSSSFK 438
FT P+S+ +L TL ADD+V+RS SFK
Sbjct: 178 FTKPESMAVLEATLQADDDVVRSMSFK 204
>ref|XP_004143860.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cucumis sativus]
Length = 222
Score = 215 bits (548), Expect = 5e-54
Identities = 109/147 (74%), Positives = 120/147 (81%), Gaps = 1/147 (0%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEA-EEKEEPQCPPGLRKYETMVVLRPDM 177
V A EF +FFE L D PP PG GF A EEKEEPQCPPGLRKYE+MVVLRPDM
Sbjct: 58 VKAQTLEFSGSFFEGGLGSQDEPPAPPGTGFATALEEKEEPQCPPGLRKYESMVVLRPDM 117
Query: 178 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 357
SEDERL FT+KYEELLVAGG MYVEVFN+G+IPLAYSIKKKNKAGETNTY+DGI LLFTY
Sbjct: 118 SEDERLAFTEKYEELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTY 177
Query: 358 FTNPQSIELLSETLLADDEVIRSSSFK 438
FT P+S+ +L TL ADD+V+RS SFK
Sbjct: 178 FTKPESMAVLEATLQADDDVVRSMSFK 204
>sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6 beta,
chloroplastic; Contains: RecName: Full=30S ribosomal
protein S6 gamma, chloroplastic; Contains: RecName:
Full=30S ribosomal protein S6 delta, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6
epsilon, chloroplastic; Flags: Precursor
gi|188036207|pdb|3BBN|F Chain F, Homology Model For The
Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome.
gi|7582401|gb|AAF64311.1|AF250383_1 plastid ribosomal
protein S6 precursor, partial [Spinacia oleracea]
Length = 168
Score = 214 bits (545), Expect = 1e-53
Identities = 110/152 (72%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDA-PPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDM 177
V A+ +F +FFE G D PP P AG EEK EPQCPPGLR+YETM VLRPDM
Sbjct: 17 VKAIALDFSGSFFEGGFGGLDEDPPSTPPAGLA-VEEKPEPQCPPGLRQYETMAVLRPDM 75
Query: 178 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 357
+EDERLT TQKYEELLVAGG MYVEVFNRGVIPLAYSIK+KNKAGETN Y+DGI+LLFTY
Sbjct: 76 TEDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYLLFTY 135
Query: 358 FTNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
FT P+SI L L+ DD+VIRSSSFKIRKRK
Sbjct: 136 FTKPESISPLEAALVTDDDVIRSSSFKIRKRK 167
>ref|XP_002297965.2| hypothetical protein POPTR_0001s10930g [Populus trichocarpa]
gi|550346990|gb|EEE82770.2| hypothetical protein
POPTR_0001s10930g [Populus trichocarpa]
Length = 240
Score = 213 bits (543), Expect = 2e-53
Identities = 110/154 (71%), Positives = 125/154 (81%), Gaps = 4/154 (2%)
Frame = +1
Query: 4 TAVKAE---FDLAFFERDLEGGDAPPEIPGAGFPEA-EEKEEPQCPPGLRKYETMVVLRP 171
TAVKA+ F +F+E + D P G+G A EEKE P CPPGLR+YETM VLRP
Sbjct: 86 TAVKAQTVDFAGSFYEGGIGSDDEPDSPIGSGTMTAVEEKETPPCPPGLRQYETMAVLRP 145
Query: 172 DMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLF 351
DMSEDERL TQKYEELLVAGGGMYVEVFNRGV+PLAYSIKKKNKAGE+NTY+DGI+LLF
Sbjct: 146 DMSEDERLALTQKYEELLVAGGGMYVEVFNRGVVPLAYSIKKKNKAGESNTYLDGIYLLF 205
Query: 352 TYFTNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
TYFT P+SI +L +TL DD+VIRSSSFK+RKRK
Sbjct: 206 TYFTKPESIGILEQTLNTDDDVIRSSSFKVRKRK 239
>ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297332180|gb|EFH62598.1| ribosomal protein S6
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 213 bits (542), Expect = 2e-53
Identities = 107/146 (73%), Positives = 118/146 (80%), Gaps = 1/146 (0%)
Frame = +1
Query: 19 EFDLAFFERDLEGGDAPPEIPGAGFPEA-EEKEEPQCPPGLRKYETMVVLRPDMSEDERL 195
+F FFE D P PG+G A E+K EPQCPPGLR+YETM VLRPDMSEDERL
Sbjct: 64 DFSGTFFEGGFGSDDDPTSPPGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERL 123
Query: 196 TFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYFTNPQS 375
TQKYEELLVAGGGMYVEVFNRGVIPLAYSI+KKNKAGETNTY+DGI+LLFTYFT P+S
Sbjct: 124 GLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPES 183
Query: 376 IELLSETLLADDEVIRSSSFKIRKRK 453
I L L ADD++IRSSSFKI+KRK
Sbjct: 184 ITPLETVLTADDDIIRSSSFKIKKRK 209
>ref|XP_004300500.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 201
Score = 211 bits (538), Expect = 7e-53
Identities = 107/152 (70%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPPEIP-GAGFPEAEEKEEPQCPPGLRKYETMVVLRPDM 177
V EF +FFE D P P G G E+KEEP CPPGLR+YETM VLRPDM
Sbjct: 49 VNVQSLEFSGSFFEGGGFQSDDDPNSPNGPGMTAVEDKEEPPCPPGLRQYETMAVLRPDM 108
Query: 178 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 357
SEDERL TQKYEELL+AGGGMYVEVFNRGVIPLAYSI+KKNKAGE+NTY+DGI+LLFTY
Sbjct: 109 SEDERLALTQKYEELLIAGGGMYVEVFNRGVIPLAYSIQKKNKAGESNTYLDGIYLLFTY 168
Query: 358 FTNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
FT P+S+E L + L ADD VIRS SFKIRKRK
Sbjct: 169 FTKPESLEFLEQNLKADDNVIRSLSFKIRKRK 200
>ref|XP_006476347.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Citrus sinensis]
Length = 219
Score = 211 bits (536), Expect = 1e-52
Identities = 108/155 (69%), Positives = 124/155 (80%), Gaps = 4/155 (2%)
Frame = +1
Query: 1 VTAVKAEFDLAFFERDLEGGDAPP-EIPGAGFPEA---EEKEEPQCPPGLRKYETMVVLR 168
V A +F +FFE G D P +P A E+KEEPQCPPGLR+YETM+VLR
Sbjct: 62 VKAQTLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMMVLR 121
Query: 169 PDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLL 348
PDMSEDERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSI+K+NKAGE+NTY+DGI+LL
Sbjct: 122 PDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGESNTYLDGIYLL 181
Query: 349 FTYFTNPQSIELLSETLLADDEVIRSSSFKIRKRK 453
FTYFT P+SIE L T+ ADD+VIRSSSFK+RK+K
Sbjct: 182 FTYFTKPESIEALERTMKADDDVIRSSSFKVRKQK 216