BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00010814
         (1005 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   462   e-128
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   419   e-115
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       366   9e-99
gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlise...   360   5e-97
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]       359   1e-96
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   358   1e-96
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   358   2e-96
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   358   3e-96
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   357   4e-96
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu...   357   6e-96
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   354   4e-95
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu...   354   4e-95
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   353   5e-95
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   353   6e-95
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   353   6e-95
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   353   8e-95
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana...   350   7e-94
gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   345   2e-92
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       323   7e-86
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   320   4e-85

>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  462 bits (1189), Expect = e-128
 Identities = 229/343 (66%), Positives = 269/343 (78%), Gaps = 8/343 (2%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L +AE ++ FLE  +  G IEALE+KPGK+G R YAKVQFT    A  II L   G
Sbjct: 9    GFPKLIAAEEVRKFLEGHTCEGAIEALEVKPGKRGSRAYAKVQFTSKEDADKIIHLANIG 68

Query: 181  LFY----NGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVV 348
            L+Y    + SYLKAFEQD NFV N R+   E++G+TLNFGCQ+S+DRFSVLW+A DV V 
Sbjct: 69   LYYYLGNSRSYLKAFEQDTNFV-NHRSFMHELDGLTLNFGCQVSKDRFSVLWRAADVSVK 127

Query: 349  FGAKLKKMQFLLSHGEVEYRLQLSCESVWQIVLYPNA----RLLLIQLFGAPRIYKKLET 516
            FG+ L KM   +    VEYRLQLS E++WQIVLY ++    RLLLIQLFGAPRIYKKLE 
Sbjct: 128  FGSSLNKMHLFVCDDLVEYRLQLSYENIWQIVLYNSSVQTERLLLIQLFGAPRIYKKLEY 187

Query: 517  SIYSFYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFY 696
            S+YSFY+ETP+DQWVRTTDFTPSCIGQSSGLCLQL      L +F+ +F++Y+V E PF 
Sbjct: 188  SVYSFYRETPDDQWVRTTDFTPSCIGQSSGLCLQLPRHVK-LPDFKNNFMHYTVSEEPFQ 246

Query: 697  LESGTPFSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRV 876
            L +G PF  NLPLVPIVQPPRGLELPY++LFK+CSLVQTGCLPGMKLD  FF+C+NP+R 
Sbjct: 247  LVNGAPFCGNLPLVPIVQPPRGLELPYKLLFKVCSLVQTGCLPGMKLDTEFFQCLNPRRY 306

Query: 877  DIKYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
             I+YIEHAL+KLYY KECCYDPVAWL EQYRKY+T EE PKPP
Sbjct: 307  AIRYIEHALDKLYYIKECCYDPVAWLREQYRKYQTFEELPKPP 349


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  419 bits (1077), Expect = e-115
 Identities = 209/339 (61%), Positives = 250/339 (73%), Gaps = 4/339 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L +AE +K FLE  +G GT+ ALE+K  K G R YA+VQFT+ R A+ IIDL K+ 
Sbjct: 9    GFPYLVAAELVKKFLENYTGEGTVIALEVKTAKVGRRAYARVQFTNIRCAETIIDLAKNR 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L+Y  SYLKA+E D + V NPRT   EM  +TLNFGCQIS  +FSVLWK   V V FG  
Sbjct: 69   LYYGTSYLKAYESDIDIVQNPRTFAHEMENVTLNFGCQISPHKFSVLWKGESVTVKFGTG 128

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            +KKM F L H  VEY++QLS E++WQIVLY     +++LL+IQLFGAPRIYKKL  S+YS
Sbjct: 129  MKKMHFFLRHNSVEYKMQLSYENIWQIVLYNSYGQSSKLLVIQLFGAPRIYKKLSGSVYS 188

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            ++  T +DQWVRTTDFT S IGQSS LCLQL Y    L NF  +F+YY   ETPF LE+G
Sbjct: 189  YFMVTQDDQWVRTTDFTQSLIGQSSSLCLQLPYGMR-LPNFRDNFLYYKESETPFRLETG 247

Query: 709  TPFSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDIKY 888
             PFS N  LVPIV+PP  ++LPY +LFK+CSLVQTGCLPG KLD +FF  VNP + DI+Y
Sbjct: 248  VPFSHNSDLVPIVRPPIDIKLPYTLLFKVCSLVQTGCLPGPKLDRSFFDLVNPAKHDIRY 307

Query: 889  IEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
            IEHALEKLYY KECCY+P AWL EQY +YRT +E PK P
Sbjct: 308  IEHALEKLYYLKECCYNPAAWLKEQYERYRTSKEHPKSP 346


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  366 bits (939), Expect = 9e-99
 Identities = 191/341 (56%), Positives = 239/341 (70%), Gaps = 6/341 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +K FLE  +G GT+ ALE+K  K G R +AKVQF +++ A+ IIDL   G
Sbjct: 9    GFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEFIIDLASKG 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L+Y  SYLKA+E   + V  PRT  + M+G+TLNFGCQIS+ +F+VL  + DV + FG  
Sbjct: 69   LYYGPSYLKAWEMKTDIV-QPRTYVEHMDGVTLNFGCQISDKKFAVLG-SKDVSIKFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK+ F LSH   +Y+LQLS E++WQ+VL+     NA+ LL+QLFGAPRIYK+LE S YS
Sbjct: 127  LKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRIYKRLEDSCYS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDFTPS IG SS LCL+       L NF + F YY      F L++G
Sbjct: 187  FFKETPDDQWVRTTDFTPSWIGLSSSLCLEFRNGVQ-LPNFSESFFYYKESMNQFILQTG 245

Query: 709  TPFSAN--LPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
              FS +  L LVPIV  P G+ELPY+ILFKI SL+Q GC PG+ L+  FF+ V+P+R +I
Sbjct: 246  FTFSFSQKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQLVDPRRRNI 305

Query: 883  KYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              IEHALEKLYY KECCYDPV WL EQY +Y    + PK P
Sbjct: 306  ACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSP 346


>gb|EPS70289.1| hypothetical protein M569_04468, partial [Genlisea aurea]
          Length = 1095

 Score =  360 bits (924), Expect = 5e-97
 Identities = 186/339 (54%), Positives = 233/339 (68%), Gaps = 4/339 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP+   A+ +K  +E  +G GT+ AL+++  K GPR YA VQF D+R A+MI+   ++ 
Sbjct: 9    GFPSRVPADSVKQLVERYTGQGTVVALKVEASKSGPRAYAVVQFLDARSAEMIVH-AQNS 67

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L+Y  SYLK    D   V NP TN   ++ +TL+FGCQIS ++FSVLW  +DV V FG +
Sbjct: 68   LYYGSSYLKVRYSDKELVRNPATNLQLIDQVTLHFGCQISGNKFSVLWSCSDVTVKFGTQ 127

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY---PNARLLLIQLFGAPRIYKKLETSIYSF 531
            LK + F+L  G   Y LQLS +S+W+ VLY      R LLIQLFGAPRI KK+E S YS+
Sbjct: 128  LKTISFILFDGLYNYMLQLSYKSIWKTVLYNPSSGRRKLLIQLFGAPRISKKVEGSPYSY 187

Query: 532  YKETPEDQWVRTTDFTPSC-IGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            Y    EDQWVRTTDFT +  IGQSSGLCL+  + S  L  F  DFVY+  +E  F+L+ G
Sbjct: 188  YNVYTEDQWVRTTDFTRAALIGQSSGLCLEFPHGSR-LPRFRDDFVYFKEKEEEFHLQEG 246

Query: 709  TPFSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDIKY 888
              FS N  L PIV PPRGL LPY I+FKICSLVQ GC+PG +LDA F+R VNPQ VDI+Y
Sbjct: 247  YSFSQNSVLAPIVGPPRGLSLPYNIVFKICSLVQMGCIPGPELDANFYRMVNPQLVDIRY 306

Query: 889  IEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
            IEHALEK++Y KECCYDPV WL  QYR+Y+T   +P  P
Sbjct: 307  IEHALEKIFYLKECCYDPVKWLESQYRRYQT--SKPSSP 343


>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score =  359 bits (921), Expect = 1e-96
 Identities = 187/341 (54%), Positives = 240/341 (70%), Gaps = 6/341 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +K+FLE  +G GT+ ALE+K  K G R++A+VQF  ++ A++IIDL   G
Sbjct: 9    GFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRSFARVQFASNKSAELIIDLASMG 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L+Y  SYLKA+E + + V  PRT    M+G+TLNFGCQIS+ +F+VL  + DV + FG  
Sbjct: 69   LYYGPSYLKAWEMNTDIV-QPRTYVQHMDGVTLNFGCQISDKKFAVLG-SKDVSIKFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK+ F LS+G  +Y+LQLS E++WQ+VL+      A+ LL+QLFGAPRIYK+LE S YS
Sbjct: 127  LKKIYFFLSYGSSDYKLQLSYENIWQVVLHRPYGQKAQFLLLQLFGAPRIYKRLEESCYS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDFTPS IG SS LCL+  +    L NF + F YY        L +G
Sbjct: 187  FFKETPDDQWVRTTDFTPSWIGLSSSLCLEF-HNGIRLPNFRESFFYYKESGNQVILRTG 245

Query: 709  TPFSAN--LPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
              FS +  L LVPIV  P G++LPY+ILFKI SL+Q GC PG+ L+  FF+ V+P+R +I
Sbjct: 246  FTFSFSQKLALVPIVHLPNGVDLPYKILFKISSLIQHGCFPGVALNFNFFQLVDPRRRNI 305

Query: 883  KYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              IEHALEKLYY KECCYDPV WL EQY +Y    + PK P
Sbjct: 306  ACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSP 346


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  358 bits (920), Expect = 1e-96
 Identities = 193/341 (56%), Positives = 234/341 (68%), Gaps = 6/341 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +K FLE  +G GTI ALE+K  K G R +AKVQF D+  A  II+L    
Sbjct: 9    GFPNLLSAEVVKLFLEKHTGYGTICALEVKQSKGGSRAFAKVQFVDNISADKIINLASKR 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L++  SYLKA+E   + V   R   D M+GITLNFGCQISED+F+VL  +T+V + FG  
Sbjct: 69   LYFGSSYLKAWEMKTDIV-QLRAYVDHMDGITLNFGCQISEDKFAVLG-STEVSIKFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK  F LS G  +Y+LQLS E++WQ+VL+     NA+ LLIQLFGAPRIYK+LE S YS
Sbjct: 127  LKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDFTPS IG SS LCLQ       L NF++ F +Y+ RE    L++G
Sbjct: 187  FFKETPDDQWVRTTDFTPSWIGLSSSLCLQFRR-GVHLPNFQESFFHYAERENNITLQTG 245

Query: 709  TPF--SANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
              F  S    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+  FFR V+PQR ++
Sbjct: 246  FTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNV 305

Query: 883  KYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              IE ALEKLYY KECCYDPV WL EQY  Y    + PK P
Sbjct: 306  ACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSP 346


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  358 bits (919), Expect = 2e-96
 Identities = 192/341 (56%), Positives = 236/341 (69%), Gaps = 6/341 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  II L  + 
Sbjct: 9    GFPYLLSAEVVKSFLEKYTGYGTVCALEVKQSKGGSRAFAKVQFADNISADKIITLANNR 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L++  SYLKA+E   + V   R   D+M+GITLNFGCQIS+D+F+VL  +T+V + FG  
Sbjct: 69   LYFGSSYLKAWEMKTDIV-QLRAYVDQMDGITLNFGCQISDDKFAVLG-STEVSIQFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK  F LS G  +Y+LQLS E++WQ+VL+     NA+ LLIQLFGAPRIYK+LE S YS
Sbjct: 127  LKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDF PS IG SS LCLQ       L NFE+ F +Y+ RE    L++G
Sbjct: 187  FFKETPDDQWVRTTDFPPSWIGLSSSLCLQFRRGVR-LPNFEESFFHYAERENNITLQTG 245

Query: 709  TPF--SANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
              F  S    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+  FFR V+P+R ++
Sbjct: 246  FTFFVSQKSALVPNVQPPEGISIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPRRRNV 305

Query: 883  KYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              IEHALEKLYY KECCYDPV WL EQY  Y    + PK P
Sbjct: 306  ACIEHALEKLYYIKECCYDPVRWLTEQYDGYLKGRQPPKSP 346


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  358 bits (918), Expect = 3e-96
 Identities = 191/341 (56%), Positives = 234/341 (68%), Gaps = 6/341 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  II+L    
Sbjct: 9    GFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADKIINLASKR 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L++  SYLKA+E   + V   R   D M+GITLNFGCQIS+D+F+VL  +T+V + FG  
Sbjct: 69   LYFGSSYLKAWEMKTDIV-QLRAYVDHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK  F LS G  +Y+LQLS E++WQ+VL+     NA+ LLIQLFGAPRIYK+LE S YS
Sbjct: 127  LKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +Y+ RE    L++G
Sbjct: 187  FFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFHYAERENNITLQTG 245

Query: 709  TPF--SANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
              F  S    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+  FFR V+PQR ++
Sbjct: 246  FTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVNFFRLVDPQRRNV 305

Query: 883  KYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              IE ALEKLYY KECCYDPV WL EQY  Y    + PK P
Sbjct: 306  ACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSP 346


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  357 bits (916), Expect = 4e-96
 Identities = 186/342 (54%), Positives = 237/342 (69%), Gaps = 7/342 (2%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +K+FLE  +G GT+ ALE+K  K G R +AKVQF +++ A++IIDL   G
Sbjct: 9    GFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEIIIDLASKG 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L+Y  SYLKA+E    ++  PRT    M+G+TLNFGCQIS+ +F+VL     V + FG  
Sbjct: 69   LYYGPSYLKAWEM-KTYIVQPRTYVQHMDGVTLNFGCQISDKKFAVLGSKV-VSIKFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK+ F LS+G  +Y+LQLS E++WQ+VL+      A+ LL+QL GAPRIYK+LE S YS
Sbjct: 127  LKKIYFFLSYGSTDYKLQLSYENIWQVVLHRPYGQKAQFLLLQLSGAPRIYKRLEDSCYS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDFTPS IG SS LCL+  +    L NF + F YY        L++G
Sbjct: 187  FFKETPDDQWVRTTDFTPSWIGLSSSLCLEF-HNGVRLPNFSESFFYYKESANQVILQTG 245

Query: 709  TPFSAN---LPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVD 879
              FS +   L LVPIV  P G+ELPY+ILFKI SL+Q GC PG+ L+  FF+ V+P+R +
Sbjct: 246  FTFSFSQKKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFFQLVDPRRRN 305

Query: 880  IKYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
            I  IEHALEKLYY KECCYDPV WL EQY +Y    + PK P
Sbjct: 306  IACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSP 347


>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 841

 Score =  357 bits (915), Expect = 6e-96
 Identities = 191/341 (56%), Positives = 234/341 (68%), Gaps = 6/341 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  II+L    
Sbjct: 9    GFPYLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADKIINLASKR 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L++  SYLKA+E   + V   R   D M+GITLNFGCQIS+D+F+VL  +T+V + FG  
Sbjct: 69   LYFGSSYLKAWEMKTDIV-QLRAYVDHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK  F LS G  +Y+LQLS E++WQ+VL+     NA+ LLIQLFGAPRIYK+LE S YS
Sbjct: 127  LKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +Y+ RE    L++G
Sbjct: 187  FFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFHYTERENNITLQTG 245

Query: 709  TPF--SANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
              F  S    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+  FFR V+PQR ++
Sbjct: 246  FTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNV 305

Query: 883  KYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              IE ALEKLYY KECCYDPV WL EQY  Y    + PK P
Sbjct: 306  ACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSP 346


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  354 bits (908), Expect = 4e-95
 Identities = 190/331 (57%), Positives = 232/331 (70%), Gaps = 6/331 (1%)
 Frame = +1

Query: 1   GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKG-PRTYAKVQFTDSRYAKMIIDLCKS 177
           G P+  SA  IK FLE  +G GTIEALE+K  K G   T+AKVQFT  R A++II L K 
Sbjct: 9   GVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAELIISLAKQ 68

Query: 178 GLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGA 357
            L+Y G+YLKA E D + +P PRT    M+ ITL+FG Q+S +RF VLWKA +V V FG 
Sbjct: 69  -LWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKAINVSVKFGF 127

Query: 358 KLKKMQFLLSHGEVEYRLQLSCESVWQIVLYP----NARLLLIQLFGAPRIYKKLETSIY 525
            L+K  F LSHG  EY+L+LSCE++WQI L      N + LLIQL  AP+IY+K + S  
Sbjct: 128 GLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQIYEK-DVSAL 186

Query: 526 SFYKETPEDQWVRTTDFTPSC-IGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLE 702
           S++KETP+DQWVR  DFTPSC IGQSS LCL+L + S  L NF ++F  Y   +  F LE
Sbjct: 187 SYFKETPDDQWVREIDFTPSCSIGQSSALCLELPHGSQ-LPNFCENFARYKENDRKFILE 245

Query: 703 SGTPFSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
           SG  FS NL LVPIV PP+G  LP++ILFKI +LVQ GCL G  LD  FFR V+PQR++I
Sbjct: 246 SGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGPTLDTNFFRWVDPQRINI 305

Query: 883 KYIEHALEKLYYAKECCYDPVAWLLEQYRKY 975
            +IEHALEKLYY +ECCY+PV WL EQYR Y
Sbjct: 306 SFIEHALEKLYYLEECCYEPVRWLHEQYRTY 336


>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 935

 Score =  354 bits (908), Expect = 4e-95
 Identities = 190/341 (55%), Positives = 234/341 (68%), Gaps = 6/341 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  II+L    
Sbjct: 9    GFPRLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADKIINLASKR 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L++  SYLKA+E + + V       D M+GITLNFGCQIS+D+F+VL  +T+V + FG  
Sbjct: 69   LYFGSSYLKAWELETDIV-QLWAYVDHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LK   F LS G  +Y+LQLS E++WQ+VL+     NA+ LLIQLFGAPRIYK+LE S YS
Sbjct: 127  LKNFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDFTPS IG SS LCLQ       L NF++ F +Y+ RE    L++G
Sbjct: 187  FFKETPDDQWVRTTDFTPSWIGLSSSLCLQFRR-GVHLPNFQESFFHYAERENNITLQTG 245

Query: 709  TPF--SANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
              F  S    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+  FFR V+PQR ++
Sbjct: 246  FTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNV 305

Query: 883  KYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              IE ALEKLYY KECCYDPV WL EQY  Y    + PK P
Sbjct: 306  ACIEQALEKLYYLKECCYDPVRWLTEQYDGYFKGRQPPKSP 346


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  353 bits (907), Expect = 5e-95
 Identities = 188/341 (55%), Positives = 233/341 (68%), Gaps = 6/341 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L  AE +KSFLE  +G GT+ AL++K  K G R +AKVQF D+  A  II+L    
Sbjct: 9    GFPDLLPAEVVKSFLEKHTGYGTVCALDVKQSKGGSRAFAKVQFVDNISADKIINLASKR 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L++  SYLKA+E   + V       D M+GITLNFGCQIS+D+F+VL  +T+V + FG  
Sbjct: 69   LYFGSSYLKAWEMKTDIVQVAYV--DHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIG 125

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK+ F LS G  +Y+LQLS E++WQ+VL+     NA+ LLIQLFGAPRIYK+LE S YS
Sbjct: 126  LKKIYFFLSRGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYS 185

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +Y+ RE    L++G
Sbjct: 186  FFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFHYAERENNITLQTG 244

Query: 709  TPF--SANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
              F  S    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+  FFR V+PQR ++
Sbjct: 245  FTFFISQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPSLNVYFFRLVDPQRRNV 304

Query: 883  KYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              IE ALEKLYY KECCYDPV WL EQY  Y    + PK P
Sbjct: 305  ACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSP 345


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score =  353 bits (906), Expect = 6e-95
 Identities = 190/341 (55%), Positives = 233/341 (68%), Gaps = 6/341 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +KSFLE  +G GT+ ALE+K  K G R +AKVQF D+  A  II+L    
Sbjct: 9    GFPDLLSAEVVKSFLEKHTGYGTVCALEVKQSKGGSRAFAKVQFVDNISADKIINLASKR 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L++  SYLKA E + + V       D M+GITLNFGCQIS+D+F+VL  +T+V + FG  
Sbjct: 69   LYFGSSYLKAREMETDLV-QLWEYVDHMDGITLNFGCQISDDKFAVLG-STEVSIKFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK  F LS G  +Y+LQLS E++WQ+VL+     NA+ LLIQLFGAPRIYK+LE S YS
Sbjct: 127  LKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDF PS IG SS LCLQ       L NF++ F +Y+ RE    L++G
Sbjct: 187  FFKETPDDQWVRTTDFAPSWIGLSSSLCLQFRR-GVHLPNFQESFFHYAERENNITLQTG 245

Query: 709  TPF--SANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
              F  S    LVP VQPP G+ +PY+ILFKI SLVQ GC+PG  L+  FFR V+PQR ++
Sbjct: 246  FTFFVSQKSALVPNVQPPEGIAIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPQRRNV 305

Query: 883  KYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              IE ALEKLYY KECCYDPV WL EQY  Y    + PK P
Sbjct: 306  ACIEQALEKLYYLKECCYDPVRWLTEQYDGYLKGRQPPKSP 346


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  353 bits (906), Expect = 6e-95
 Identities = 183/331 (55%), Positives = 234/331 (70%), Gaps = 6/331 (1%)
 Frame = +1

Query: 1   GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPR-TYAKVQFTDSRYAKMIIDLCKS 177
           GFP++ SA+ IK FLE  +G GTIEALE+K  + G   T+AKVQFT    A+ II LCK 
Sbjct: 9   GFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAEFIITLCKK 68

Query: 178 GLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGA 357
            ++Y  +YLKA E D + +P PR     M+ ITL+FGCQ+S++RF VLWKA +V V FG+
Sbjct: 69  KVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAINVSVKFGS 128

Query: 358 KLKKMQFLLSHGEVEYRLQLSCESVWQIVL-YPNARL---LLIQLFGAPRIYKKLETSIY 525
            L+K  F LSHG  EY+L+LS E++WQI L +P  ++   LLIQL GAP+IY+K    + 
Sbjct: 129 GLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQIYEKDVPVLS 188

Query: 526 SFYKETPEDQWVRTTDFTPSC-IGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLE 702
            ++KE P+DQWVR  DFTPSC IGQS  LCL+L Y S  L NF ++F YY   +  F LE
Sbjct: 189 YYFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQ-LPNFRENFAYYKENDGKFILE 247

Query: 703 SGTPFSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDI 882
           SG+ +S NL LVPI+ PP+G  LP++ILFKI +LVQ GCL G  LD +FFR V+P+R  I
Sbjct: 248 SGSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGPTLDTSFFRLVDPERFPI 307

Query: 883 KYIEHALEKLYYAKECCYDPVAWLLEQYRKY 975
            +IEHALEKLY+ KECCY+PV WL EQYR Y
Sbjct: 308 SFIEHALEKLYHLKECCYEPVRWLSEQYRTY 338


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  353 bits (905), Expect = 8e-95
 Identities = 184/347 (53%), Positives = 234/347 (67%), Gaps = 13/347 (3%)
 Frame = +1

Query: 4    FPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSGL 183
            FP+   AE +K+FLE  +G  T+ AL+++  K G R YA VQFT S  A++II L    L
Sbjct: 10   FPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGGRAYAIVQFTKSTDAELIIRLTNQRL 69

Query: 184  FYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAKL 363
            +Y  SYLKA E +N+ VP PRT    M G+TL+FGCQ+S ++F VLW+  DV V FG  +
Sbjct: 70   YYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVDVTVNFGMGM 129

Query: 364  KKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKK-------- 507
            +K+QFLLSH  VEYRL L  E++WQI L+      ++ LLIQLFGAPRIY+K        
Sbjct: 130  RKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPRIYEKDVRSSGLV 189

Query: 508  LETSIYSFYKETPEDQWVRTTDFT-PSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRE 684
             E  + +++ + P+DQWVRTTDFT  SCIGQSS LCL+L Y    L NF ++F YY   E
Sbjct: 190  FENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQ-LPNFRENFAYYKESE 248

Query: 685  TPFYLESGTPFSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVN 864
              F LESG+ +S NL LVPIV P  G++LPY ILFKI  LVQ GC+PG  LDA F+R VN
Sbjct: 249  GKFVLESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGPALDANFYRLVN 308

Query: 865  PQRVDIKYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
            P R+D  YI+HALEKLYY KECC++P  WLLEQY+ Y   ++ P  P
Sbjct: 309  PCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGSP 355


>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
          Length = 1044

 Score =  350 bits (897), Expect = 7e-94
 Identities = 183/340 (53%), Positives = 236/340 (69%), Gaps = 5/340 (1%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGPRTYAKVQFTDSRYAKMIIDLCKSG 180
            GFP L SAE +K+FLE  +G GT+ ALE+K  K G R +AKVQF +++ A++I+DL   G
Sbjct: 9    GFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAELIMDLASEG 68

Query: 181  LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAK 360
            L+Y  SYL+A+E   + V  PRT    M+G+TLNFGCQIS+ +F+VL  + DV + FG  
Sbjct: 69   LYYGPSYLQAWEMKTDIV-QPRTYVQHMDGVTLNFGCQISDKKFAVLG-SKDVSIKFGIG 126

Query: 361  LKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKKLETSIYS 528
            LKK+ F LS+G  +Y+LQLS E++WQ+VL+      A+ LL+QLFGAPRI+K+LE S  S
Sbjct: 127  LKKIYFFLSYGSTDYKLQLSYENIWQVVLHCPYGQKAQFLLLQLFGAPRIHKRLEDSCNS 186

Query: 529  FYKETPEDQWVRTTDFTPSCIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESG 708
            F+KETP+DQWVRTTDFTPS IG SS LCL+  +    L NF   F YY      ++ +  
Sbjct: 187  FFKETPDDQWVRTTDFTPSWIGLSSSLCLEF-HNGVRLPNFSGSFFYYKESGPSYFTDWF 245

Query: 709  T-PFSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDIK 885
            T  F   L LVPIV  P G+ELPY+ILFKI SL+Q GC PG+ L+  FF+ V+P+R +I 
Sbjct: 246  TFSFVQKLSLVPIVHLPEGVELPYKILFKISSLIQHGCFPGLALNFNFFQLVDPRRRNIA 305

Query: 886  YIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
             IEHALEKLYY KECCYDPV WL EQY +Y    + PK P
Sbjct: 306  CIEHALEKLYYLKECCYDPVRWLTEQYDEYLKHRQLPKSP 345


>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  345 bits (885), Expect = 2e-92
 Identities = 170/277 (61%), Positives = 209/277 (75%), Gaps = 5/277 (1%)
 Frame = +1

Query: 190  NGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGAKLKK 369
            N  YLK +EQ  + VPNPRT  + + G+TLN GCQISED FSVLWKA+DV + FG  LK 
Sbjct: 11   NTYYLKFWEQKTDIVPNPRTYDNVVEGVTLNLGCQISEDEFSVLWKASDVSIKFGTGLKN 70

Query: 370  MQFLLSHGEVEYRLQLSCESVWQIVLYPN----ARLLLIQLFGAPRIYKKLETSIYSFYK 537
            M   L H  VEYRLQL  +++WQIVLY +    A++LLIQL+GAPRI+KKL  S+YS+++
Sbjct: 71   MHLFLCHESVEYRLQLYYDNIWQIVLYNSGGQAAQVLLIQLYGAPRIHKKLPDSVYSYFQ 130

Query: 538  ETPEDQWVRTTDFTPS-CIGQSSGLCLQLDYISNFLKNFEKDFVYYSVRETPFYLESGTP 714
            +TP+DQWVRTTDFTPS CIGQSSG+CLQ       L  FE+ FVYY   + PF+LE+G P
Sbjct: 131  QTPDDQWVRTTDFTPSSCIGQSSGMCLQFPSGIK-LPEFERHFVYYKESKKPFFLENGVP 189

Query: 715  FSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRCVNPQRVDIKYIE 894
            F  NL LVPI+QP RGLELPYR+LFK+C LVQTGCLPG KLD  F+R +NP+  DI Y+E
Sbjct: 190  FCENLDLVPIMQP-RGLELPYRLLFKVCCLVQTGCLPGPKLDDNFYRLLNPKSFDITYLE 248

Query: 895  HALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
              LEKLYY KECCYDP +WL+EQ++ Y T  ++PKPP
Sbjct: 249  QLLEKLYYLKECCYDPHSWLIEQHQNYCTF-KKPKPP 284


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  323 bits (828), Expect = 7e-86
 Identities = 173/350 (49%), Positives = 230/350 (65%), Gaps = 15/350 (4%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKG-PRTYAKVQFTDSRYAKMIIDLCKS 177
            GFP+  SAE +K FLE  +G GT+ A++++P K G  R+YA VQF     A++II L   
Sbjct: 9    GFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGSRSYAIVQFMTVETAELIIRLANP 68

Query: 178  GLFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVFGA 357
             L+Y  SYL A   + + VP PR     +  +TL+FGCQIS+++FS LW+  +V V FG 
Sbjct: 69   RLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWRVGNVSVDFGL 128

Query: 358  KLKKMQFLLSHGEVEYRLQLSCESVWQIVLY----PNARLLLIQLFGAPRIYKK------ 507
             L+++ F L++G VEYRLQL  E+VWQI L+      A+ LLIQL GAPR+Y+K      
Sbjct: 129  GLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLIQLLGAPRVYEKEVRISF 188

Query: 508  --LETSIYSFYKETPEDQWVRTTDFTPS-CIGQSSGLCLQLDYISNFLKNFEKDFVYYSV 678
              LE  +++++K+TP+DQWVR TDFT S CIG SS L L+L Y  + L +  ++FVYY  
Sbjct: 189  DILENPLFNYFKDTPDDQWVRATDFTESCCIGHSSALYLELPYGVD-LPDLRENFVYYKE 247

Query: 679  RETPFYLESGTPFSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFFRC 858
             E  F LESG+ FS NL LVPIV PP G+ LP+  +FKI  L+Q GCL G  LD  F+R 
Sbjct: 248  SEERFILESGSSFSRNLDLVPIVGPPSGINLPFETVFKINMLLQNGCLSGPTLDVDFYRL 307

Query: 859  VNPQRV-DIKYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
            V+PQR+ ++  I +ALEKL+  KEC Y+P AWL EQYRKY T    PKPP
Sbjct: 308  VDPQRIRNVDCINYALEKLFNLKECPYEPAAWLNEQYRKYLTAPRPPKPP 357


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  320 bits (821), Expect = 4e-85
 Identities = 175/353 (49%), Positives = 234/353 (66%), Gaps = 18/353 (5%)
 Frame = +1

Query: 1    GFPTLYSAEHIKSFLEARSGLGTIEALEMKPGKKGP-RTYAKVQFTDSRYAKMIIDL-CK 174
            GFP   +AE +K FLE+++G GT+ AL+++  KKG  R YA VQFT    A  II L C+
Sbjct: 9    GFPAGVTAEAVKDFLESKTGGGTVYALKLRTPKKGVGRLYAIVQFTTKEAADTIISLACR 68

Query: 175  SG-LFYNGSYLKAFEQDNNFVPNPRTNQDEMNGITLNFGCQISEDRFSVLWKATDVDVVF 351
            +  L+Y  SYL A   + + VP PRT    M  I L+FGC+IS ++F+VLW+  +V V F
Sbjct: 69   TEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRGVNVTVNF 128

Query: 352  GAKLKKMQFLLSHGEVEYRLQLSCESVWQIVL----YPNARLLLIQLFGAPRIYKK---- 507
            G  ++K+ FLLSH   EYRL+L  E++W+I L    +   + LLIQL GAPRI++K    
Sbjct: 129  GFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQLLGAPRIFQKGIRS 188

Query: 508  ----LETSIYSFYKETPEDQWVRTTDFTPS-CIGQSSGLCLQLDYISNFLKNFEKDFVYY 672
                 E+ +++F+KE P+DQWVRTTDFTPS  IGQS+GLC++L Y    L +F+++F YY
Sbjct: 189  PDLLYESPVFNFFKEVPDDQWVRTTDFTPSNFIGQSTGLCMELPYRLE-LPDFKENFAYY 247

Query: 673  SVRETPFYLESGTPFSANLPLVPIVQPPRGLELPYRILFKICSLVQTGCLPGMKLDATFF 852
               E  F LE+G+ +S +L LVPIV PP G+ LPY ILFKI  LVQ GC+ G  LD+ F+
Sbjct: 248  KESEDRFVLETGSAYSRSLDLVPIVGPPDGIALPYEILFKINLLVQNGCVAGPLLDSNFY 307

Query: 853  RCVNPQR--VDIKYIEHALEKLYYAKECCYDPVAWLLEQYRKYRTLEEQPKPP 1005
            R V+P R  V I  IEHAL+KLY+ KECCY+P  WL +QYRKY T   +P  P
Sbjct: 308  RLVDPYRAPVSISCIEHALDKLYHLKECCYEPSRWLTDQYRKYMTSRSKPSSP 360