BLASTX nr result
ID: Mentha28_contig00010702
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00010702
(307 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus... 96 4e-18
gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana] 94 2e-17
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 92 1e-16
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana... 91 1e-16
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 89 8e-16
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de... 83 5e-14
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper... 83 5e-14
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu... 82 6e-14
gb|AAT39934.2| RNA-directed RNA polymerase-like, identical [Sola... 82 6e-14
gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solan... 82 8e-14
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de... 82 1e-13
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 81 1e-13
gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tu... 81 1e-13
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall... 80 2e-13
gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tu... 80 2e-13
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 80 3e-13
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 79 5e-13
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ... 79 5e-13
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 79 9e-13
gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum de... 79 9e-13
>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
Length = 1110
Score = 96.3 bits (238), Expect = 4e-18
Identities = 53/98 (54%), Positives = 67/98 (68%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MG+TIQV GFP+L++AE VK FLE G GT+ A++VK+ K G RAYARVQFT++
Sbjct: 1 MGRTIQVFGFPYLVAAELVKKFLENYT-----GEGTVIALEVKTAKVGRRAYARVQFTNI 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTY 8
A LA L YGTSYLK ++ D+DIV NPRT+
Sbjct: 56 RCAETIIDLAK-NRLYYGTSYLKAYESDIDIVQNPRTF 92
>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
Length = 479
Score = 94.4 bits (233), Expect = 2e-17
Identities = 53/98 (54%), Positives = 66/98 (67%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP+LLSAE VK FLE G GT++A++VK K G R++ARVQF
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENH-----TGNGTVYALEVKQSKGGRRSFARVQFASN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTY 8
+ A + LA++G L YG SYLK W+ + DIV PRTY
Sbjct: 56 KSAELIIDLASMG-LYYGPSYLKAWEMNTDIV-QPRTY 91
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 91.7 bits (226), Expect = 1e-16
Identities = 53/98 (54%), Positives = 64/98 (65%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP+LLSAE VK FLE G GT++A++VK K G RA+A+VQF +
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKKFLENH-----TGNGTVYALEVKQSKGGRRAFAKVQFANN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTY 8
+ A LA+ G L YG SYLK W+ DIV PRTY
Sbjct: 56 KSAEFIIDLASKG-LYYGPSYLKAWEMKTDIV-QPRTY 91
>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
Length = 1044
Score = 91.3 bits (225), Expect = 1e-16
Identities = 52/98 (53%), Positives = 65/98 (66%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP+LLSAE VK FLE G GT++A++VK K G RA+A+VQF +
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENH-----TGNGTVYALEVKQSKGGRRAFAKVQFANN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTY 8
+ A + LA+ G L YG SYL+ W+ DIV PRTY
Sbjct: 56 KSAELIMDLASEG-LYYGPSYLQAWEMKTDIV-QPRTY 91
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 88.6 bits (218), Expect = 8e-16
Identities = 52/98 (53%), Positives = 64/98 (65%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP+LLSAE VK FLE G GT++A++VK K G RA+A+VQF +
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENH-----TGNGTVYALEVKQSKGGRRAFAKVQFANN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTY 8
+ A + LA+ G L YG SYLK W+ IV PRTY
Sbjct: 56 KSAEIIIDLASKG-LYYGPSYLKAWEMKTYIV-QPRTY 91
>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1139
Score = 82.8 bits (203), Expect = 5e-14
Identities = 52/102 (50%), Positives = 64/102 (62%)
Frame = -1
Query: 307 GKMGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFT 128
G MGKTIQV GFP LLSAE VK FLE+ G GT+ A++VK K+G RA+A+VQF
Sbjct: 25 GYMGKTIQVYGFPDLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKRGSRAFAKVQFV 79
Query: 127 DVEYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTYED 2
D A +LA+ L +G+SYLK W+ DIV R Y D
Sbjct: 80 DNISADKIINLASKR-LYFGSSYLKAWEMKADIV-QLRAYVD 119
>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
[Solanum lycopersicum]
Length = 1114
Score = 82.8 bits (203), Expect = 5e-14
Identities = 52/100 (52%), Positives = 63/100 (63%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP+LLSAE VK FLE+ G GT+ A++VK K G RA+A+VQF D
Sbjct: 1 MGKTIQVFGFPYLLSAEVVKSFLEKY-----TGYGTVCALEVKQSKGGSRAFAKVQFADN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTYED 2
A +LAN L +G+SYLK W+ DIV R Y D
Sbjct: 56 ISADKIITLAN-NRLYFGSSYLKAWEMKTDIV-QLRAYVD 93
>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1115
Score = 82.4 bits (202), Expect = 6e-14
Identities = 52/100 (52%), Positives = 64/100 (64%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP+LLSAE VK+FLE+ G GTI A++VK K G RA+A+VQF D
Sbjct: 1 MGKTIQVFGFPNLLSAEVVKLFLEKH-----TGYGTICALEVKQSKGGSRAFAKVQFVDN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTYED 2
A +LA+ L +G+SYLK W+ DIV R Y D
Sbjct: 56 ISADKIINLASKR-LYFGSSYLKAWEMKTDIV-QLRAYVD 93
>gb|AAT39934.2| RNA-directed RNA polymerase-like, identical [Solanum demissum]
Length = 190
Score = 82.4 bits (202), Expect = 6e-14
Identities = 52/100 (52%), Positives = 64/100 (64%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP+LLSAE VK+FLE+ G GTI A++VK K G RA+A+VQF D
Sbjct: 1 MGKTIQVFGFPNLLSAEVVKLFLEKH-----TGYGTICALEVKQSKGGSRAFAKVQFVDN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTYED 2
A +LA+ L +G+SYLK W+ DIV R Y D
Sbjct: 56 ISADKIINLASKR-LYFGSSYLKAWEMKTDIV-QLRAYVD 93
>gb|AAT39936.2| RNA-directed RNA polymerase-like, putative [Solanum demissum]
Length = 1137
Score = 82.0 bits (201), Expect = 8e-14
Identities = 49/94 (52%), Positives = 61/94 (64%)
Frame = -1
Query: 307 GKMGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFT 128
G MGKTIQV GFP LLSAE VK FLE+ G GT+ A++VK K G RA+A+VQF
Sbjct: 69 GYMGKTIQVYGFPRLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFV 123
Query: 127 DVEYAAMFKSLANLGILMYGTSYLKVWDQDMDIV 26
D A +LA+ L +G+SYLK W+ + DIV
Sbjct: 124 DNISADKIINLASKR-LYFGSSYLKAWELETDIV 156
>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1180
Score = 81.6 bits (200), Expect = 1e-13
Identities = 51/100 (51%), Positives = 64/100 (64%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP+LLSAE VK FLE+ G GT+ A++VK K G RA+A+VQF D
Sbjct: 1 MGKTIQVYGFPYLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFVDN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTYED 2
A +LA+ L +G+SYLK W+ DIV + R Y D
Sbjct: 56 ISADKIINLASKR-LYFGSSYLKAWEMKTDIV-HLRAYVD 93
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 81.3 bits (199), Expect = 1e-13
Identities = 49/99 (49%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGV-RAYARVQFTD 125
MGKTI +SGFP ++A+ VK FLE G GT++A++V+ K+G R YA VQFT
Sbjct: 1 MGKTIHISGFPSHVTADAVKNFLEGHT-----GPGTVYAIKVRPPKRGGGRLYAIVQFTS 55
Query: 124 VEYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTY 8
A + SLAN L YG+SYLK ++DIVP PRTY
Sbjct: 56 ATQAELIISLANQR-LWYGSSYLKARATEVDIVPKPRTY 93
>gb|ABO93004.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 841
Score = 81.3 bits (199), Expect = 1e-13
Identities = 51/100 (51%), Positives = 63/100 (63%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP+LLSAE VK FLE+ G GT+ A++VK K G RA+A+VQF D
Sbjct: 1 MGKTIQVYGFPYLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFVDN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTYED 2
A +LA+ L +G+SYLK W+ DIV R Y D
Sbjct: 56 ISADKIINLASKR-LYFGSSYLKAWEMKTDIV-QLRAYVD 93
>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
Length = 1107
Score = 80.5 bits (197), Expect = 2e-13
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQG-VRAYARVQFTD 125
MGKTIQV GFP+ +SAE VK FLE+ G+GT++A++V+ K+G R +A VQFT+
Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLT-----GSGTVYAIKVRQPKKGGPRVFAIVQFTN 55
Query: 124 VEYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPR 14
YA + A L YG SYL ++ D DIVP PR
Sbjct: 56 ERYARQIITGAAERRLYYGRSYLNAFEVDQDIVPKPR 92
>gb|ABO92978.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 935
Score = 80.5 bits (197), Expect = 2e-13
Identities = 48/92 (52%), Positives = 60/92 (65%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP LLSAE VK FLE+ G GT+ A++VK K G RA+A+VQF D
Sbjct: 1 MGKTIQVYGFPRLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFVDN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIV 26
A +LA+ L +G+SYLK W+ + DIV
Sbjct: 56 ISADKIINLASKR-LYFGSSYLKAWELETDIV 86
>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
Length = 1115
Score = 80.1 bits (196), Expect = 3e-13
Identities = 51/100 (51%), Positives = 62/100 (62%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQV GFP LLSAE VK FLE+ G GT+ A++VK K G RA+A+VQF D
Sbjct: 1 MGKTIQVYGFPDLLSAEVVKSFLEKH-----TGYGTVCALEVKQSKGGSRAFAKVQFVDN 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTYED 2
A +LA+ L +G+SYLK W+ DIV R Y D
Sbjct: 56 ISADKIINLASKR-LYFGSSYLKAWEMKTDIV-QLRAYVD 93
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 79.3 bits (194), Expect = 5e-13
Identities = 48/98 (48%), Positives = 60/98 (61%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFTDV 122
MGKTIQVS FP + AE VK FLE L G T++A++++ K G RAYA VQFT
Sbjct: 1 MGKTIQVSRFPSNVHAEEVKTFLE-----LYTGKETVYALKIRQQKNGGRAYAIVQFTKS 55
Query: 121 EYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPRTY 8
A + L N L YG+SYLK + + DIVP PRT+
Sbjct: 56 TDAELIIRLTNQR-LYYGSSYLKAREMENDIVPKPRTF 92
>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
1 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 79.3 bits (194), Expect = 5e-13
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQG-VRAYARVQFTD 125
MGKTIQV GFP+ +SAE VK FLE+ G+GT++A++V+ K+G R +A VQFT+
Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLT-----GSGTVYAIKVRQPKKGGPRVFAIVQFTN 55
Query: 124 VEYAAMFKSLANLGILMYGTSYLKVWDQDMDIVPNPR 14
YA + A L YG SYL ++ + DIVP PR
Sbjct: 56 ERYARQIITGAAERSLYYGRSYLNAFEVEQDIVPKPR 92
>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
max] gi|571439308|ref|XP_006574822.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
max] gi|571439310|ref|XP_006574823.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
max]
Length = 1125
Score = 78.6 bits (192), Expect = 9e-13
Identities = 46/101 (45%), Positives = 62/101 (61%), Gaps = 3/101 (2%)
Frame = -1
Query: 301 MGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGV-RAYARVQFTD 125
MGKTI++ GFP ++ +VK F+EQ G GT+FA++++ GK V RA+A +QFT
Sbjct: 1 MGKTIELYGFPTSVNVSDVKTFVEQYT-----GEGTVFAIKLRHGKGRVPRAFAIIQFTT 55
Query: 124 VEYAAMFKSLAN--LGILMYGTSYLKVWDQDMDIVPNPRTY 8
A S AN L L YGTSYLK + + DIVP PR +
Sbjct: 56 ANSATSMMSRANNILRTLRYGTSYLKAREMERDIVPRPRVF 96
>gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 241
Score = 78.6 bits (192), Expect = 9e-13
Identities = 48/94 (51%), Positives = 58/94 (61%)
Frame = -1
Query: 307 GKMGKTIQVSGFPHLLSAENVKMFLEQRMELLGRGTGTIFAVQVKSGKQGVRAYARVQFT 128
G MGKTIQV GFP LL AE VK FLE+ G GT+ A+ VK K G RA+A+VQF
Sbjct: 64 GYMGKTIQVYGFPDLLPAEVVKSFLEKH-----TGYGTVCALDVKQSKGGSRAFAKVQFV 118
Query: 127 DVEYAAMFKSLANLGILMYGTSYLKVWDQDMDIV 26
D A +LA+ L +G+SYLK W+ DIV
Sbjct: 119 DNISADKIINLASKR-LYFGSSYLKAWEMKTDIV 151