BLASTX nr result
ID: Mentha28_contig00007899
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha28_contig00007899
(802 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [T... 78 3e-12
ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [T... 78 3e-12
ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-pro... 77 1e-11
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l... 77 1e-11
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom... 75 2e-11
emb|CBI19367.3| unnamed protein product [Vitis vinifera] 75 2e-11
gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Mor... 74 6e-11
gb|EXC25269.1| hypothetical protein L484_003757 [Morus notabilis] 74 6e-11
ref|XP_002320019.2| FF domain-containing family protein [Populus... 73 1e-10
gb|EYU36395.1| hypothetical protein MIMGU_mgv1a000784mg [Mimulus... 72 3e-10
ref|XP_002891304.1| hypothetical protein ARALYDRAFT_891421 [Arab... 71 4e-10
ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-l... 71 5e-10
ref|XP_002510055.1| protein binding protein, putative [Ricinus c... 70 7e-10
ref|XP_006306359.1| hypothetical protein CARUB_v10012256mg [Caps... 70 9e-10
ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-l... 70 1e-09
ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-l... 69 2e-09
ref|XP_006393693.1| hypothetical protein EUTSA_v10011212mg [Eutr... 68 4e-09
ref|XP_006393692.1| hypothetical protein EUTSA_v10011212mg [Eutr... 68 4e-09
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l... 67 8e-09
ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [T... 67 1e-08
>ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
gi|508723766|gb|EOY15663.1| Pre-mRNA-processing protein
40A isoform 3 [Theobroma cacao]
Length = 1041
Score = 78.2 bits (191), Expect = 3e-12
Identities = 34/39 (87%), Positives = 39/39 (100%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRS 345
RRHGSDRKKSRKHA+SPESD+ESRHKKHKRD+RDGS+R+
Sbjct: 985 RRHGSDRKKSRKHAHSPESDNESRHKKHKRDHRDGSRRN 1023
>ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
gi|590596803|ref|XP_007018437.1| Pre-mRNA-processing
protein 40A isoform 1 [Theobroma cacao]
gi|508723764|gb|EOY15661.1| Pre-mRNA-processing protein
40A isoform 1 [Theobroma cacao]
gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
40A isoform 1 [Theobroma cacao]
Length = 1032
Score = 78.2 bits (191), Expect = 3e-12
Identities = 34/39 (87%), Positives = 39/39 (100%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRS 345
RRHGSDRKKSRKHA+SPESD+ESRHKKHKRD+RDGS+R+
Sbjct: 976 RRHGSDRKKSRKHAHSPESDNESRHKKHKRDHRDGSRRN 1014
>ref|XP_004169188.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-processing protein
40A-like, partial [Cucumis sativus]
Length = 803
Score = 76.6 bits (187), Expect = 1e-11
Identities = 32/39 (82%), Positives = 39/39 (100%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRS 345
R+HGSDRKKSRKHAYSPESDSE+RH++HKRD+RDGS+R+
Sbjct: 749 RKHGSDRKKSRKHAYSPESDSENRHRRHKRDHRDGSRRN 787
>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
Length = 985
Score = 76.6 bits (187), Expect = 1e-11
Identities = 32/39 (82%), Positives = 39/39 (100%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRS 345
R+HGSDRKKSRKHAYSPESDSE+RH++HKRD+RDGS+R+
Sbjct: 931 RKHGSDRKKSRKHAYSPESDSENRHRRHKRDHRDGSRRN 969
>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
vinifera]
Length = 1020
Score = 75.5 bits (184), Expect = 2e-11
Identities = 32/40 (80%), Positives = 39/40 (97%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
RRHGSDRKKSRKHAY+PESD+ESRHK+HKR++ DGS+R+G
Sbjct: 964 RRHGSDRKKSRKHAYTPESDTESRHKRHKREHWDGSRRNG 1003
>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
Length = 1030
Score = 75.5 bits (184), Expect = 2e-11
Identities = 32/40 (80%), Positives = 39/40 (97%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
RRHGSDRKKSRKHAY+PESD+ESRHK+HKR++ DGS+R+G
Sbjct: 974 RRHGSDRKKSRKHAYTPESDTESRHKRHKREHWDGSRRNG 1013
>gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
Length = 994
Score = 73.9 bits (180), Expect = 6e-11
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSGH 351
R+H SDRKKSRKHAYSPESD ESRHKKH+RD+RD + GH
Sbjct: 939 RKHSSDRKKSRKHAYSPESDGESRHKKHRRDHRDSRRNGGH 979
>gb|EXC25269.1| hypothetical protein L484_003757 [Morus notabilis]
Length = 586
Score = 73.9 bits (180), Expect = 6e-11
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSGH 351
R+H SDRKKSRKHAYSPESD ESRHKKH+RD+RD + GH
Sbjct: 531 RKHSSDRKKSRKHAYSPESDGESRHKKHRRDHRDSRRNGGH 571
>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
gi|550323102|gb|EEE98334.2| FF domain-containing family
protein [Populus trichocarpa]
Length = 1019
Score = 73.2 bits (178), Expect = 1e-10
Identities = 30/40 (75%), Positives = 37/40 (92%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
R+H SDRKKSRKH Y+PESD ES+HK+HKRD+RDGS+R+G
Sbjct: 953 RKHSSDRKKSRKHTYTPESDGESQHKRHKRDHRDGSRRNG 992
>gb|EYU36395.1| hypothetical protein MIMGU_mgv1a000784mg [Mimulus guttatus]
Length = 987
Score = 71.6 bits (174), Expect = 3e-10
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +1
Query: 232 RHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
RHGSDRKKSRKHA SPESD E RHK+H+RD+RDGS+R G
Sbjct: 932 RHGSDRKKSRKHANSPESDGEGRHKRHRRDHRDGSRRIG 970
>ref|XP_002891304.1| hypothetical protein ARALYDRAFT_891421 [Arabidopsis lyrata subsp.
lyrata] gi|297337146|gb|EFH67563.1| hypothetical protein
ARALYDRAFT_891421 [Arabidopsis lyrata subsp. lyrata]
Length = 967
Score = 71.2 bits (173), Expect = 4e-10
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSGH 351
R+HG+DRKKSRKHA SPESDSE+RHK+ K++ R+GS+RSGH
Sbjct: 911 RKHGNDRKKSRKHANSPESDSENRHKRQKKEQREGSRRSGH 951
>ref|XP_004498955.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cicer arietinum]
Length = 1000
Score = 70.9 bits (172), Expect = 5e-10
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
RRHGSDRKKSRKHA SPESD+ESRHK+HKR++ D S+R+G
Sbjct: 945 RRHGSDRKKSRKHANSPESDNESRHKRHKREHWDSSRRTG 984
>ref|XP_002510055.1| protein binding protein, putative [Ricinus communis]
gi|223550756|gb|EEF52242.1| protein binding protein,
putative [Ricinus communis]
Length = 970
Score = 70.5 bits (171), Expect = 7e-10
Identities = 29/40 (72%), Positives = 37/40 (92%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
R+H SDRKKSRKH+Y+PESDSE+RHKKHKRD R+ S+++G
Sbjct: 914 RKHSSDRKKSRKHSYTPESDSENRHKKHKRDQRESSRKNG 953
>ref|XP_006306359.1| hypothetical protein CARUB_v10012256mg [Capsella rubella]
gi|482575070|gb|EOA39257.1| hypothetical protein
CARUB_v10012256mg [Capsella rubella]
Length = 966
Score = 70.1 bits (170), Expect = 9e-10
Identities = 29/41 (70%), Positives = 38/41 (92%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSGH 351
R+HG+DRKK+RKHAYSPESD E+RHK+ K+D R+GS+RSG+
Sbjct: 910 RKHGNDRKKTRKHAYSPESDGENRHKRLKKDQREGSRRSGY 950
>ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
Length = 997
Score = 69.7 bits (169), Expect = 1e-09
Identities = 29/40 (72%), Positives = 38/40 (95%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
RRHGS+RKKSRKHA SPESD+E+RH++HKRD+ DGS+++G
Sbjct: 942 RRHGSERKKSRKHANSPESDNENRHRRHKRDHWDGSRKTG 981
>ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca
subsp. vesca]
Length = 990
Score = 68.9 bits (167), Expect = 2e-09
Identities = 28/39 (71%), Positives = 37/39 (94%)
Frame = +1
Query: 232 RHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
RH SDRKKSRK AY+PESDSE+RH++HK+++RDGS+R+G
Sbjct: 935 RHSSDRKKSRKRAYTPESDSENRHRRHKKEHRDGSRRNG 973
>ref|XP_006393693.1| hypothetical protein EUTSA_v10011212mg [Eutrema salsugineum]
gi|557090271|gb|ESQ30979.1| hypothetical protein
EUTSA_v10011212mg [Eutrema salsugineum]
Length = 958
Score = 67.8 bits (164), Expect = 4e-09
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
R+HGSDRKKSRKHA SPESDSESRHK+ K+++R+ S+R G
Sbjct: 901 RKHGSDRKKSRKHANSPESDSESRHKRQKKEHRESSRRGG 940
>ref|XP_006393692.1| hypothetical protein EUTSA_v10011212mg [Eutrema salsugineum]
gi|557090270|gb|ESQ30978.1| hypothetical protein
EUTSA_v10011212mg [Eutrema salsugineum]
Length = 957
Score = 67.8 bits (164), Expect = 4e-09
Identities = 29/40 (72%), Positives = 36/40 (90%)
Frame = +1
Query: 229 RRHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
R+HGSDRKKSRKHA SPESDSESRHK+ K+++R+ S+R G
Sbjct: 900 RKHGSDRKKSRKHANSPESDSESRHKRQKKEHRESSRRGG 939
>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
tuberosum]
Length = 1031
Score = 67.0 bits (162), Expect = 8e-09
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +1
Query: 232 RHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRSG 348
RH SDRKKS+KHA+SPESD ESRHK+H+RD RDGS+R+G
Sbjct: 978 RHSSDRKKSKKHAHSPESDGESRHKRHRRD-RDGSRRNG 1015
>ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [Theobroma cacao]
gi|508706620|gb|EOX98516.1| Pre-mRNA-processing protein
40B, putative [Theobroma cacao]
Length = 1025
Score = 66.6 bits (161), Expect = 1e-08
Identities = 27/38 (71%), Positives = 37/38 (97%)
Frame = +1
Query: 232 RHGSDRKKSRKHAYSPESDSESRHKKHKRDYRDGSKRS 345
RHGSDRKKS++HA +PESDSE+RHK+HKR++R+GS+R+
Sbjct: 971 RHGSDRKKSKRHASTPESDSENRHKRHKREHRNGSRRN 1008