BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00007815
         (964 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   307   4e-81
gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus...   302   1e-79
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   295   1e-77
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp...   292   2e-76
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...   288   3e-75
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr...   287   4e-75
gb|EPS60671.1| hypothetical protein M569_14131, partial [Genlise...   286   9e-75
gb|EPS59981.1| hypothetical protein M569_14824, partial [Genlise...   283   6e-74
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   282   1e-73
ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prun...   280   6e-73
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   279   1e-72
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    278   2e-72
ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarp...   277   4e-72
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th...   277   5e-72
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   275   2e-71
sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, c...   275   3e-71
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab...   275   3e-71
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps...   274   3e-71
sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,...   274   4e-71
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   273   8e-71

>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  307 bits (787), Expect = 4e-81
 Identities = 156/231 (67%), Positives = 189/231 (81%), Gaps = 13/231 (5%)
 Frame = -2

Query: 681 SRFVRNVAISSDLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNVDSSRLAGLFQQAGNVE 502
           SRFVRNVA+SSD  E+ ED    E +P F P+LKL+VGNLPFNVDS+ LAGLF+QAGNVE
Sbjct: 59  SRFVRNVAVSSDY-EQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVE 117

Query: 501 MVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSDNFSF 322
           MVEVIY+K+TGRSRGFGFVTMSTVEEVEAAAQQFNGYE  GR LRV+S PPP + +N +F
Sbjct: 118 MVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNF 177

Query: 321 QG-------------GPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVF 181
           +G             GPRGG  +++TNR+YVGNLSW VD+  LETLF+EQGKV EA V++
Sbjct: 178 RGENSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIY 237

Query: 180 DRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKREY 28
           DRE+GRSRGFGFV+Y SA+EV+ AI SLDG+D++GRSIRV+ AEARP+R++
Sbjct: 238 DRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288


>gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus guttatus]
          Length = 309

 Score =  302 bits (774), Expect = 1e-79
 Identities = 169/294 (57%), Positives = 206/294 (70%), Gaps = 8/294 (2%)
 Frame = -2

Query: 894 ESRNLRKTLSFHTLHTLTMAASLQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRH--- 724
           +SR + K    HTLHT+ MAASL +                              +    
Sbjct: 18  QSREVSKPYLLHTLHTVAMAASLNFLSLTPQTLSLHHTSSSAAASASTLFTPSSLKPLPK 77

Query: 723 -VLSLSTVGSSAHPVSRFVRNVAISSDLGEKVEDDEVTE----KQPYFPPELKLYVGNLP 559
            VL+LS   + AH  SRFVR VAISS++ E VE+ E  +    ++  F P+LKL+VGNLP
Sbjct: 78  LVLALSPATNFAHTTSRFVRCVAISSEVDETVEEGEGEDFSAPEEQSFSPDLKLFVGNLP 137

Query: 558 FNVDSSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHG 379
           FNVDS+ LAGLF+QAGNVEMVEVIY+K++GRSRGFGFVTMS++ E EAAAQQFNGYE  G
Sbjct: 138 FNVDSAALAGLFEQAGNVEMVEVIYDKLSGRSRGFGFVTMSSLAEAEAAAQQFNGYELQG 197

Query: 378 RALRVSSDPPPPKSDNFSFQGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVK 199
           RALRV+S PPP KSD  +  GGPR   +  NTNR+YVGNLSW VDN  LETLF+EQG+V+
Sbjct: 198 RALRVNSGPPPAKSD--TPFGGPR-RTSSGNTNRVYVGNLSWGVDNSALETLFSEQGQVQ 254

Query: 198 EATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPK 37
           EA VV+DRESGRSRGFGFV+Y S +EV++AI +LDG D+DGRSIRVS AE RP+
Sbjct: 255 EARVVYDRESGRSRGFGFVTYSSPEEVNSAIEALDGADLDGRSIRVSPAEERPR 308


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  295 bits (756), Expect = 1e-77
 Identities = 153/231 (66%), Positives = 188/231 (81%), Gaps = 2/231 (0%)
 Frame = -2

Query: 720 LSLSTVGSSAHPVSRFVRNVAISS-DLGEKVED-DEVTEKQPYFPPELKLYVGNLPFNVD 547
           L+LS   SS+   SRFVR V +S  D  E VED D+  E++  F P+LK++VGNLPF+ D
Sbjct: 40  LNLSLSSSSSCFSSRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSAD 99

Query: 546 SSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALR 367
           S+ LA LF++AGNVEMVEVIY+K+TGRSRGFGFVTMS+ EEVEAA QQFNGYE  GRALR
Sbjct: 100 SAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALR 159

Query: 366 VSSDPPPPKSDNFSFQGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATV 187
           V+S PPP K +N SF+GG RGG + D++NR+YVGNL+W VD   LETLF+EQGKV +A V
Sbjct: 160 VNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKV 219

Query: 186 VFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKR 34
           V+DR+SGRSRGFGFV+Y SA+EV+NAI SLDG+D++GR+IRVS AEARP R
Sbjct: 220 VYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 270



 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 35/83 (42%), Positives = 55/83 (66%)
 Frame = -2

Query: 279 RLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRS 100
           +++VGNL +S D+  L  LF   G V+   V++D+ +GRSRGFGFV+  S +EV+ A + 
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 99  LDGMDVDGRSIRVSRAEARPKRE 31
            +G ++DGR++RV+      KRE
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRE 170


>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
           gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 273

 Score =  292 bits (747), Expect = 2e-76
 Identities = 147/218 (67%), Positives = 182/218 (83%)
 Frame = -2

Query: 681 SRFVRNVAISSDLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNVDSSRLAGLFQQAGNVE 502
           SRF++NVAISS+ G++ ED      +  F  +LKL+VGNLPFNVDS+RLAGLF+ AGNVE
Sbjct: 59  SRFLKNVAISSEFGQE-EDFLSDGDEQSFSQDLKLFVGNLPFNVDSARLAGLFETAGNVE 117

Query: 501 MVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSDNFSF 322
           MVEVIY+KVTGRSRGFGFVTM+T+EEVEAA++QFNGYE  GR LRV+  PPP K  +FS 
Sbjct: 118 MVEVIYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFS- 176

Query: 321 QGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGFGFV 142
             GPRGG T D+ NR+YVGNLSW+VDN  LETLF E+G+V +A VV+DR+SGRSRGFGFV
Sbjct: 177 -RGPRGGETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFV 235

Query: 141 SYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKREY 28
           +Y SA+EVDNAI SL+G ++DGR+IRVS AEA+P+R++
Sbjct: 236 TYSSAEEVDNAIDSLNGAELDGRAIRVSVAEAKPRRQF 273


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223541388|gb|EEF42939.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 280

 Score =  288 bits (736), Expect = 3e-75
 Identities = 149/222 (67%), Positives = 183/222 (82%), Gaps = 4/222 (1%)
 Frame = -2

Query: 681 SRFVRNVAISSDLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNVDSSRLAGLFQQAGNVE 502
           SRFV +VAISS+ G++ ED      +  F  +LKL+VGNLPFNVDS++LAGLF+ AGNVE
Sbjct: 61  SRFVPSVAISSEFGQE-EDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVE 119

Query: 501 MVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSDNFS- 325
           MVEVIY+KVTGRSRGFGFVTMS+++EVEAAAQQFNGYE  GRALRV+S PPP +  +FS 
Sbjct: 120 MVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSR 179

Query: 324 ---FQGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRG 154
              F GG  GG +++  NRLYVGNLSWSVDN  LE+ F+EQGKV +A VV+DRESGRSRG
Sbjct: 180 SPRFGGGGGGGESLEG-NRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRG 238

Query: 153 FGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKREY 28
           FGFV+Y SA+EV+NAI SL+G ++DGR+IRVS AEARP+R++
Sbjct: 239 FGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEARPRRQF 280


>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|568855826|ref|XP_006481497.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like [Citrus
           sinensis] gi|557530828|gb|ESR42011.1| hypothetical
           protein CICLE_v10012331mg [Citrus clementina]
          Length = 282

 Score =  287 bits (735), Expect = 4e-75
 Identities = 153/219 (69%), Positives = 178/219 (81%), Gaps = 3/219 (1%)
 Frame = -2

Query: 681 SRFVRNVAISSDLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNVDSSRLAGLFQQAGNVE 502
           SRFVRNVA+SS+  ++ ED    E    F P+LKL+VGNLPF+VDS++LAGLF+ AGNVE
Sbjct: 63  SRFVRNVAVSSEFDQE-EDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVE 121

Query: 501 MVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSDNFSF 322
           MVEVIY+KVTGRSRGFGFVTMS+VEEVEAAAQQFNGYE  GR LRV+S PPPP+ + FS 
Sbjct: 122 MVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEFS- 180

Query: 321 QGGPRG---GRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGF 151
             GPRG   G      NR+YVGNLSW VD+  LETLF EQGKV EA VV+DRESGRSRGF
Sbjct: 181 PRGPRGGGAGAPSSGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGF 240

Query: 150 GFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKR 34
           GFV+Y SA+EVDNAI SL+G+D+ GR+IRVS AEARP+R
Sbjct: 241 GFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 279



 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 39/85 (45%), Positives = 54/85 (63%)
 Frame = -2

Query: 582 KLYVGNLPFNVDSSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQ 403
           ++YVGNL + VD   L  LF++ G V   +V+Y++ +GRSRGFGFVT S+ EEV+ A   
Sbjct: 198 RVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDS 257

Query: 402 FNGYEFHGRALRVSSDPPPPKSDNF 328
            NG +  GRA+RVS     P+   F
Sbjct: 258 LNGVDLAGRAIRVSVAEARPQRRQF 282



 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 36/83 (43%), Positives = 56/83 (67%)
 Frame = -2

Query: 279 RLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRS 100
           +L+VGNL +SVD+  L  LF   G V+   V++D+ +GRSRGFGFV+  S +EV+ A + 
Sbjct: 95  KLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQ 154

Query: 99  LDGMDVDGRSIRVSRAEARPKRE 31
            +G +++GR +RV+     P+RE
Sbjct: 155 FNGYELEGRPLRVNSGPPPPRRE 177


>gb|EPS60671.1| hypothetical protein M569_14131, partial [Genlisea aurea]
          Length = 213

 Score =  286 bits (732), Expect = 9e-75
 Identities = 144/217 (66%), Positives = 178/217 (82%)
 Frame = -2

Query: 678 RFVRNVAISSDLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNVDSSRLAGLFQQAGNVEM 499
           RFV  VA+SS+L E +ED      +P F P+LKLYVGNLPFNVDS+ LAGLF+QAGNVEM
Sbjct: 7   RFVGKVAVSSELDEDLEDQG---DEPRFSPDLKLYVGNLPFNVDSATLAGLFEQAGNVEM 63

Query: 498 VEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSDNFSFQ 319
           VEVIY+K +GRSRGFGFVTMST+ E E AAQQFNGYE+ GRALRV++ PPPP+++N   +
Sbjct: 64  VEVIYDKESGRSRGFGFVTMSTIREAETAAQQFNGYEYQGRALRVNAGPPPPRNNN---E 120

Query: 318 GGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGFGFVS 139
             PR      ++N+++VGNL+W VD+  LE LF+EQG VKEATVV+DRESGRSRGFGFV+
Sbjct: 121 APPRS----SSSNKVHVGNLAWGVDDSALEALFSEQGDVKEATVVYDRESGRSRGFGFVT 176

Query: 138 YGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKREY 28
           YGS +EV+NAIRSLDG D++GR IRVS AE+RP+R+Y
Sbjct: 177 YGSREEVNNAIRSLDGTDLNGRPIRVSAAESRPRRDY 213


>gb|EPS59981.1| hypothetical protein M569_14824, partial [Genlisea aurea]
          Length = 281

 Score =  283 bits (725), Expect = 6e-74
 Identities = 151/237 (63%), Positives = 181/237 (76%), Gaps = 21/237 (8%)
 Frame = -2

Query: 681 SRFVRNVAISSDLGEKVEDDEVTE----KQPYFPPELKLYVGNLPFNVDSSRLAGLFQQA 514
           SRFV +VAISS L E +E+ E +E     +P F P+LKL+VGNLPFNVDS+ LA LF+QA
Sbjct: 47  SRFVSHVAISSGLDEDLEEGENSEFSVSDEPNFSPDLKLFVGNLPFNVDSAGLAELFEQA 106

Query: 513 GNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSD 334
           GNVEMVEVIY+K +GRSRGFGFVTM+TVEE EAAAQQFNGYEF GR LRV++ PPP  S 
Sbjct: 107 GNVEMVEVIYDKASGRSRGFGFVTMTTVEEAEAAAQQFNGYEFQGRPLRVNAGPPP--SR 164

Query: 333 NFSFQGGPRGG-----------------RTIDNTNRLYVGNLSWSVDNHTLETLFNEQGK 205
           N S   GPRG                   + D +NR++VGNL+W VDN  LETLF EQG 
Sbjct: 165 NGSTFRGPRGSSSSRSNNGFPFQSTRTRSSFDRSNRVHVGNLAWGVDNLALETLFREQGN 224

Query: 204 VKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKR 34
           VKEATV++DRE+GRS+GFGFV+YGS +EV NAI+SLDG+D++GRSIRVS AE+RPKR
Sbjct: 225 VKEATVIYDRETGRSKGFGFVTYGSREEVKNAIKSLDGIDLNGRSIRVSEAESRPKR 281


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  282 bits (722), Expect = 1e-73
 Identities = 151/237 (63%), Positives = 185/237 (78%), Gaps = 8/237 (3%)
 Frame = -2

Query: 720 LSLSTVGSSAHPVSRFVRNVAISS-DLGEKVED-DEVTEKQPYFPPELKLYVGNLPFNVD 547
           L+LS    S+   SRFVR V +   D  E VED DE  E++  F P+LK++VGNL F+ D
Sbjct: 40  LNLSLSSPSSCFSSRFVRKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSAD 99

Query: 546 SSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALR 367
           S+ LA LF++AGNVEMVEVIY+K+TGRSRGFGFVTMS+ EEVEAA QQFNGYE  GRALR
Sbjct: 100 SAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALR 159

Query: 366 VSSDPPPPKSDNFSFQ------GGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGK 205
           V+S PPP K +N SF+      GG RGG + D++NR+YVGNL+W VD   LETLF+EQGK
Sbjct: 160 VNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGK 219

Query: 204 VKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKR 34
           V +A VV+DR+SGRSRGFGFV+Y SA+EV+NAI SLDG+D++GR+IRVS AEARP R
Sbjct: 220 VVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPR 276



 Score = 75.1 bits (183), Expect = 4e-11
 Identities = 35/83 (42%), Positives = 55/83 (66%)
 Frame = -2

Query: 279 RLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRS 100
           +++VGNL +S D+  L  LF   G V+   V++D+ +GRSRGFGFV+  S +EV+ A + 
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 99  LDGMDVDGRSIRVSRAEARPKRE 31
            +G ++DGR++RV+      KRE
Sbjct: 148 FNGYELDGRALRVNSGPPPEKRE 170


>ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
           gi|462401286|gb|EMJ06843.1| hypothetical protein
           PRUPE_ppa009295mg [Prunus persica]
          Length = 298

 Score =  280 bits (716), Expect = 6e-73
 Identities = 143/220 (65%), Positives = 183/220 (83%), Gaps = 2/220 (0%)
 Frame = -2

Query: 681 SRFVRNVAISSDLGEKVEDDEVT--EKQPYFPPELKLYVGNLPFNVDSSRLAGLFQQAGN 508
           SRFVRNVA+SS+  +   D+EV   + +  F P+LKL+VGNLPF+VDS++LAGLF+ AGN
Sbjct: 84  SRFVRNVAVSSEFEQ---DEEVLSDDGEASFAPDLKLFVGNLPFSVDSAQLAGLFESAGN 140

Query: 507 VEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSDNF 328
           VEMVEVIY+K TGRSRGFGFVTMS+V+E E AA+Q NGYE  GRALRV+  PPPP+S++ 
Sbjct: 141 VEMVEVIYDKTTGRSRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRSED- 199

Query: 327 SFQGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGFG 148
           SF+G  RGG   D++NRLYVGNL+W VDN  LE LF+EQGKV EA VV+DR+SGRSRGFG
Sbjct: 200 SFRGA-RGGGGSDSSNRLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYDRDSGRSRGFG 258

Query: 147 FVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKREY 28
           FV+YG+A E+++A+ SLDG+D++GRSIRV+ AE RP+R++
Sbjct: 259 FVTYGTADEMNSAMESLDGVDLNGRSIRVTAAEPRPRRQF 298


>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  279 bits (714), Expect = 1e-72
 Identities = 142/216 (65%), Positives = 171/216 (79%)
 Frame = -2

Query: 681 SRFVRNVAISSDLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNVDSSRLAGLFQQAGNVE 502
           SRFVRNVA+SSD G++    EV      + P+LKL+VGNLPF VDS++LAGLF+ AG VE
Sbjct: 61  SRFVRNVAVSSDYGQEEGTLEVDGDDSSYAPDLKLFVGNLPFTVDSAQLAGLFESAGQVE 120

Query: 501 MVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSDNFSF 322
            VEVIY+K TGRSRGFGFVTMSTV EVEAAAQQFNGYE  GR LRV+  PPPPK D+ SF
Sbjct: 121 RVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSF 180

Query: 321 QGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGFGFV 142
           +G  R     DN NR++V NL+W VD+ TLE LF E+G V EA VV+DR+SG+SRGFGFV
Sbjct: 181 RGS-RNASRFDNRNRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDSGKSRGFGFV 239

Query: 141 SYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKR 34
           +Y SA+EV+ AI+SLDG+D+DGR IRV++AEARP R
Sbjct: 240 TYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARPPR 275



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 35/83 (42%), Positives = 56/83 (67%)
 Frame = -2

Query: 279 RLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRS 100
           +L+VGNL ++VD+  L  LF   G+V+   V++D+ +GRSRGFGFV+  +  EV+ A + 
Sbjct: 94  KLFVGNLPFTVDSAQLAGLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQ 153

Query: 99  LDGMDVDGRSIRVSRAEARPKRE 31
            +G ++DGR +RV+     PKR+
Sbjct: 154 FNGYELDGRLLRVNYGPPPPKRD 176


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  278 bits (712), Expect = 2e-72
 Identities = 149/246 (60%), Positives = 182/246 (73%), Gaps = 17/246 (6%)
 Frame = -2

Query: 720 LSLSTVGSSAHPVSRFVRNVAISSDLGEKVEDDEVTE----KQPYFPPELKLYVGNLPFN 553
           +S S       P SRFVRNVAI+S+   +VE+D   +    K+  F  +LKL+VGNLPFN
Sbjct: 44  VSFSIAAKWNSPASRFVRNVAITSEF--EVEEDGFADVAPPKEQSFSADLKLFVGNLPFN 101

Query: 552 VDSSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRA 373
           VDS++LA LF+ AGNVEMVEVIY+K+TGRSRGFGFVTMS+V EVEAAAQQFNGYE  GR 
Sbjct: 102 VDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRP 161

Query: 372 LRVSSDPPPPKSDNFSFQGGPR-------------GGRTIDNTNRLYVGNLSWSVDNHTL 232
           LRV++ PPPPK ++  F  GPR             GG    + NR+YVGNLSW VD+  L
Sbjct: 162 LRVNAGPPPPKRED-GFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMAL 220

Query: 231 ETLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRA 52
           E+LF+EQGKV EA V++DR+SGRS+GFGFV+Y S++EV NAI+SLDG D+DGR IRVS A
Sbjct: 221 ESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEA 280

Query: 51  EARPKR 34
           EARP R
Sbjct: 281 EARPPR 286



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 43/110 (39%), Positives = 63/110 (57%)
 Frame = -2

Query: 360 SDPPPPKSDNFSFQGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVF 181
           +D  PPK  +FS               +L+VGNL ++VD+  L  LF   G V+   V++
Sbjct: 77  ADVAPPKEQSFSAD------------LKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIY 124

Query: 180 DRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKRE 31
           D+ +GRSRGFGFV+  S  EV+ A +  +G ++DGR +RV+     PKRE
Sbjct: 125 DKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 174


>ref|XP_006381446.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
           gi|550336149|gb|ERP59243.1| 29 kDa ribonucleoprotein
           [Populus trichocarpa]
          Length = 286

 Score =  277 bits (709), Expect = 4e-72
 Identities = 141/228 (61%), Positives = 184/228 (80%), Gaps = 10/228 (4%)
 Frame = -2

Query: 681 SRFVRNVAISSDLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNVDSSRLAGLFQQAGNVE 502
           SRF+++VAISS+ G++ ED      +P F P+L+L+VGNLPFNV+S++LA LF+ AGNVE
Sbjct: 60  SRFLKSVAISSEFGQE-EDVFGDGDEPSFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVE 118

Query: 501 MVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSDNF-- 328
           MVEV Y+KVTGRSRGFGFVTMST+EEVEAA+QQFNGYE  GR LRV+S PPP +  +F  
Sbjct: 119 MVEVKYDKVTGRSRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGPPPQRETSFSR 178

Query: 327 ------SFQGGP--RGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRE 172
                 SF  GP  RGG T D++NR+YVGNLSW+VD+  LE+LF E+GKV +A VV+DR+
Sbjct: 179 LPQRENSFSRGPGARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKVMDAKVVYDRD 238

Query: 171 SGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKREY 28
           SGRS+GFGFV+Y SA+EV++A+ SL+G ++DGR+IRVS AEA+P+R +
Sbjct: 239 SGRSKGFGFVTYSSAEEVEDAVDSLNGAELDGRAIRVSVAEAKPRRRF 286


>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
           Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
           Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| chloroplast RNA binding
           protein [Arabidopsis thaliana]
          Length = 289

 Score =  277 bits (708), Expect = 5e-72
 Identities = 148/246 (60%), Positives = 181/246 (73%), Gaps = 17/246 (6%)
 Frame = -2

Query: 720 LSLSTVGSSAHPVSRFVRNVAISSDLGEKVEDDEVTE----KQPYFPPELKLYVGNLPFN 553
           +S S       P SRF RNVAI+S+   +VE+D   +    K+  F  +LKL+VGNLPFN
Sbjct: 44  VSFSIAAKWNSPASRFARNVAITSEF--EVEEDGFADVAPPKEQSFSADLKLFVGNLPFN 101

Query: 552 VDSSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRA 373
           VDS++LA LF+ AGNVEMVEVIY+K+TGRSRGFGFVTMS+V EVEAAAQQFNGYE  GR 
Sbjct: 102 VDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRP 161

Query: 372 LRVSSDPPPPKSDNFSFQGGPR-------------GGRTIDNTNRLYVGNLSWSVDNHTL 232
           LRV++ PPPPK ++  F  GPR             GG    + NR+YVGNLSW VD+  L
Sbjct: 162 LRVNAGPPPPKRED-GFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMAL 220

Query: 231 ETLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRA 52
           E+LF+EQGKV EA V++DR+SGRS+GFGFV+Y S++EV NAI+SLDG D+DGR IRVS A
Sbjct: 221 ESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEA 280

Query: 51  EARPKR 34
           EARP R
Sbjct: 281 EARPPR 286



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 43/110 (39%), Positives = 63/110 (57%)
 Frame = -2

Query: 360 SDPPPPKSDNFSFQGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVF 181
           +D  PPK  +FS               +L+VGNL ++VD+  L  LF   G V+   V++
Sbjct: 77  ADVAPPKEQSFSAD------------LKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIY 124

Query: 180 DRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKRE 31
           D+ +GRSRGFGFV+  S  EV+ A +  +G ++DGR +RV+     PKRE
Sbjct: 125 DKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 174


>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 277

 Score =  275 bits (704), Expect = 2e-71
 Identities = 151/238 (63%), Positives = 187/238 (78%), Gaps = 9/238 (3%)
 Frame = -2

Query: 720 LSLSTVGSSAHPVSR-FVRNVAISSDLGEKVEDDEVT---EKQPYFPPELKLYVGNLPFN 553
           +S+S    S+   SR FVR+VA+S    +  +D+EV    E +P F P+LKL+VGNLPF 
Sbjct: 42  ISISASFLSSGKASRSFVRHVAVS----DFEQDEEVLSGDEAEPNFSPDLKLFVGNLPFT 97

Query: 552 VDSSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRA 373
           VDS++LA LF+ AGNVEMVEVIY+K TGRSRGFGFVTMS+ +EVEAAA+QFNGYE  GRA
Sbjct: 98  VDSAQLAELFEGAGNVEMVEVIYDKTTGRSRGFGFVTMSSAQEVEAAARQFNGYELDGRA 157

Query: 372 LRVSSDPPPPKSDNFSFQ----GGPRGGRTI-DNTNRLYVGNLSWSVDNHTLETLFNEQG 208
           LRV+  PPPP++++ SF+    G PRGG    D++NRLYVGNL+W VDN  LE LFNEQG
Sbjct: 158 LRVNYGPPPPRTED-SFRGARGGSPRGGGGYGDSSNRLYVGNLAWGVDNLALENLFNEQG 216

Query: 207 KVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKR 34
           KV EA VVFDR+SGRSRGFGFV+YGSA+E+++AI SLDG+D+ GRSIRV+ AE RP R
Sbjct: 217 KVLEAKVVFDRDSGRSRGFGFVTYGSAEEMNSAIESLDGVDLGGRSIRVTAAEPRPPR 274



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 37/83 (44%), Positives = 57/83 (68%)
 Frame = -2

Query: 279 RLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRS 100
           +L+VGNL ++VD+  L  LF   G V+   V++D+ +GRSRGFGFV+  SA+EV+ A R 
Sbjct: 88  KLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKTTGRSRGFGFVTMSSAQEVEAAARQ 147

Query: 99  LDGMDVDGRSIRVSRAEARPKRE 31
            +G ++DGR++RV+     P+ E
Sbjct: 148 FNGYELDGRALRVNYGPPPPRTE 170


>sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP31; Flags: Precursor gi|19710|emb|CAA46233.1|
           RNA binding protein 31 [Nicotiana plumbaginifolia]
          Length = 292

 Score =  275 bits (702), Expect = 3e-71
 Identities = 147/253 (58%), Positives = 188/253 (74%), Gaps = 22/253 (8%)
 Frame = -2

Query: 720 LSLSTVGSSAHPV---SRFVRNVAISSDLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNV 550
           LS S++G SA      S F   VA+S    +++EDD    +QP F  +LKL+VGNLPF+V
Sbjct: 42  LSSSSIGHSASIKPFESSFSTRVALSDF--DQLEDDVEVAEQPRFSEDLKLFVGNLPFSV 99

Query: 549 DSSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRAL 370
           DS+ LAGLF++AGNVE+VEVIY+K++GRSRGFGFVTMST EEVEAA QQFNGYE  GRA+
Sbjct: 100 DSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAI 159

Query: 369 RVSSDPPPPKSDNFSFQ-------------------GGPRGGRTIDNTNRLYVGNLSWSV 247
           RV++ P P K +N SF                    GG RGGR++D++NR+YVGNLSW V
Sbjct: 160 RVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGV 219

Query: 246 DNHTLETLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSI 67
           D+  L+ LF+EQG V +A VV+DR+SGRSRGFGFV+Y SAKEV++AI SL+G+D+DGRSI
Sbjct: 220 DDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSI 279

Query: 66  RVSRAEARPKREY 28
           RVS AE RP+R++
Sbjct: 280 RVSAAEERPRRQF 292


>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
           lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
           ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score =  275 bits (702), Expect = 3e-71
 Identities = 149/245 (60%), Positives = 178/245 (72%), Gaps = 16/245 (6%)
 Frame = -2

Query: 720 LSLSTVGSSAHPVSRFVRNVAISSDLGEKVED---DEVTEKQPYFPPELKLYVGNLPFNV 550
           +S S       P SRFVRNVAI+S+  E  ED   D+   +Q  F  +LKL+VGNLPFNV
Sbjct: 44  VSFSIAAKWNSPASRFVRNVAITSEF-EVEEDGFADDAAPQQQSFSADLKLFVGNLPFNV 102

Query: 549 DSSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRAL 370
           DS++LA LF+ AGNVEMVEVIY+KVTGRSRGFGFVTMS+V EVEAAA QFNGYE  GR L
Sbjct: 103 DSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPL 162

Query: 369 RVSSDPPPPKSDNFSFQGGPR-------------GGRTIDNTNRLYVGNLSWSVDNHTLE 229
           RV++ PPPPK ++  F  GPR             GG    + NR+YVGNLSW VD+  LE
Sbjct: 163 RVNAGPPPPKRED-GFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALE 221

Query: 228 TLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAE 49
           +LF EQGKV EA V++DR+SGRS+GFGFV+Y S++EV NAI SL+G D+DGR IRVS AE
Sbjct: 222 SLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAE 281

Query: 48  ARPKR 34
           ARP R
Sbjct: 282 ARPPR 286



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 40/104 (38%), Positives = 62/104 (59%)
 Frame = -2

Query: 342 KSDNFSFQGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGR 163
           + D F+    P+  ++     +L+VGNL ++VD+  L  LF   G V+   V++D+ +GR
Sbjct: 72  EEDGFADDAAPQQ-QSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGR 130

Query: 162 SRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKRE 31
           SRGFGFV+  S  EV+ A    +G ++DGR +RV+     PKRE
Sbjct: 131 SRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVNAGPPPPKRE 174


>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
           gi|482563453|gb|EOA27643.1| hypothetical protein
           CARUB_v10023790mg [Capsella rubella]
          Length = 284

 Score =  274 bits (701), Expect = 3e-71
 Identities = 145/239 (60%), Positives = 177/239 (74%), Gaps = 10/239 (4%)
 Frame = -2

Query: 720 LSLSTVGSSAHPVSRFVRNVAISS-DLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNVDS 544
           +S+S     + P SRFVRNVA S  ++ E    D+   ++  F  +LKL+VGNLPFNVDS
Sbjct: 44  VSVSIAAKWSSPASRFVRNVATSEFEVEEDGFSDDAAPQEQSFSADLKLFVGNLPFNVDS 103

Query: 543 SRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRV 364
           ++LA LF+ AGNVEMVEVIY+KVTGRSRGFGFVTMS+  EVEAAAQQFNGYE  GR LRV
Sbjct: 104 AQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRV 163

Query: 363 SSDPPPPKSDNFSFQGGPR---------GGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQ 211
           ++ PPPPK ++  F  GPR         GG    + NR+YVGNLSW VD+  LE+LF EQ
Sbjct: 164 NAGPPPPKRED-GFSRGPRSSFGGSGYGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQ 222

Query: 210 GKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKR 34
           GKV EA V++DR+SGRS+GFGFV+Y S++EV NAI SL+G D+DGR IRVS AEARP R
Sbjct: 223 GKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPR 281



 Score = 82.0 bits (201), Expect = 3e-13
 Identities = 42/104 (40%), Positives = 64/104 (61%)
 Frame = -2

Query: 342 KSDNFSFQGGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDRESGR 163
           + D FS    P+  ++     +L+VGNL ++VD+  L  LF   G V+   V++D+ +GR
Sbjct: 71  EEDGFSDDAAPQE-QSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGR 129

Query: 162 SRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKRE 31
           SRGFGFV+  SA EV+ A +  +G ++DGR +RV+     PKRE
Sbjct: 130 SRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPPKRE 173


>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
           Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
           29kD B ribonucleoprotein [Nicotiana sylvestris]
          Length = 291

 Score =  274 bits (700), Expect = 4e-71
 Identities = 142/237 (59%), Positives = 180/237 (75%), Gaps = 19/237 (8%)
 Frame = -2

Query: 681 SRFVRNVAISSDLGEKVEDDEVTEKQPYFPPELKLYVGNLPFNVDSSRLAGLFQQAGNVE 502
           S F   VA+S    +++EDD    +QP F  +LKL+VGNLPF+VDS+ LAGLF++AGNVE
Sbjct: 57  SSFSTRVALSGF--DQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVE 114

Query: 501 MVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFHGRALRVSSDPPPPKSDNFSF 322
           MVEVIY+K+TGRSRGFGFVTMST EEVEAA QQFNGYE  GRA+RV++ P P K +N SF
Sbjct: 115 MVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSF 174

Query: 321 Q-------------------GGPRGGRTIDNTNRLYVGNLSWSVDNHTLETLFNEQGKVK 199
                               GG RGGR++D++NR+YVGNLSW VD+  L+ LF+EQG V 
Sbjct: 175 GGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVV 234

Query: 198 EATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKREY 28
           +A VV+DR+SGRSRGFGFV+Y S+KEV++AI SL+G+D+DGRSIRVS AE RP+R++
Sbjct: 235 DAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQF 291


>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
           X2 [Solanum tuberosum]
          Length = 291

 Score =  273 bits (698), Expect = 8e-71
 Identities = 150/247 (60%), Positives = 183/247 (74%), Gaps = 18/247 (7%)
 Frame = -2

Query: 720 LSLSTVGSSAHPV------SRFVRNVAISSDLGEKVEDDE-VTEKQPYFPPELKLYVGNL 562
           LS ST  SS  P       SRFVRNVA+S    +++EDD    E++P F P+LKL+VGNL
Sbjct: 44  LSSSTPSSSIKPFESSSFGSRFVRNVALSEF--DQLEDDVGEVEEEPNFSPDLKLFVGNL 101

Query: 561 PFNVDSSRLAGLFQQAGNVEMVEVIYEKVTGRSRGFGFVTMSTVEEVEAAAQQFNGYEFH 382
           PF+VDS+ LA LF++AGNVEMVEVIY+K+TGRSRGFGFVTMS+  EVEAA QQFNGYE  
Sbjct: 102 PFSVDSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEID 161

Query: 381 GRALRVSSDPPPPKSDNF-----------SFQGGPRGGRTIDNTNRLYVGNLSWSVDNHT 235
           GRALRV+S P P K +N            S  GG RGGR  D++NR+YVGNLSW VD+ +
Sbjct: 162 GRALRVNSGPAPEKRENSFGGGRGGRSENSSYGGARGGRNFDSSNRVYVGNLSWGVDDLS 221

Query: 234 LETLFNEQGKVKEATVVFDRESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSR 55
           L  LF++QGKV +  VV+DR+SGRSRGFGFV++ SA+EV+ AI SL+G D+DGRSIRVS 
Sbjct: 222 LRELFSDQGKVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSA 281

Query: 54  AEARPKR 34
           AE RP R
Sbjct: 282 AEERPPR 288



 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 26/168 (15%)
 Frame = -2

Query: 456 FGFVTMSTVEEVE--AAAQQFNGYEFHGRALRVSSDPPPPKSDNFSFQGGPRGGRTIDNT 283
           F FVT  T+  ++  +A   F+ +     +L +S     P S    F+    G R + N 
Sbjct: 10  FLFVTPQTLSSLKPNSAPTSFSFFSLPSSSLNLSLSSSTPSSSIKPFESSSFGSRFVRNV 69

Query: 282 N------------------------RLYVGNLSWSVDNHTLETLFNEQGKVKEATVVFDR 175
                                    +L+VGNL +SVD+  L  LF   G V+   V++D+
Sbjct: 70  ALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNVEMVEVIYDK 129

Query: 174 ESGRSRGFGFVSYGSAKEVDNAIRSLDGMDVDGRSIRVSRAEARPKRE 31
            +GRSRGFGFV+  S  EV+ A +  +G ++DGR++RV+   A  KRE
Sbjct: 130 LTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGPAPEKRE 177