BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00007562
         (3298 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]             394   e-113
gb|ABN08974.1| gag-pol polyprotein, putative [Medicago truncatula]    384   e-108
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      398   e-107
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      397   e-107
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                      397   e-107
ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309...   395   e-107
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                      394   e-106
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                      392   e-106
ref|XP_006577547.1| PREDICTED: uncharacterized protein LOC102662...   388   e-104
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                      387   e-104
gb|AAP53706.1| retrotransposon protein, putative, unclassified [...   337   e-102
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni...   341   e-101
gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]     341   e-101
emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]         340   e-101
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s...   340   e-101
gb|ABF93543.1| retrotransposon protein, putative, unclassified [...   340   e-101
gb|ABF94836.1| retrotransposon protein, putative, unclassified [...   340   e-101
gb|ABA97696.1| retrotransposon protein, putative, unclassified [...   333   e-101
gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-...   330   e-100
gb|ABA98847.1| retrotransposon protein, putative, unclassified [...   328   e-100

>gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1643

 Score =  394 bits (1013), Expect(2) = e-113
 Identities = 193/341 (56%), Positives = 251/341 (73%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            AC +   LHQMDVK AFLNG++EEE YVEQPKGFEN   P++VY+L + +YGLKQAP AW
Sbjct: 1234 ACGMGFKLHQMDVKCAFLNGIIEEEVYVEQPKGFENLEFPEYVYKLKKALYGLKQAPRAW 1293

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RLT +L+  G+ RG  DKTLF+K +   +I+ QIYVDDIVFG T+D L+  FVK M+T
Sbjct: 1294 YERLTTFLIVQGYTRGSVDKTLFVKNDVHGIIIIQIYVDDIVFGGTSDKLVKTFVKTMTT 1353

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             F MSMVG L  FLGLQ+ Q  +G+ ++QS YA+ LVKRFG+  +K   TPM T+ KL K
Sbjct: 1354 EFRMSMVGELKYFLGLQINQTDEGITISQSTYAQNLVKRFGMCSSKPAPTPMSTTTKLFK 1413

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
             E G++VD  +Y  MIGSLLYLT+TRPD+  SV LCAR+Q++P+ SHL  VKRII+YV G
Sbjct: 1414 DEKGVKVDEKLYRGMIGSLLYLTATRPDLCLSVGLCARYQSNPKASHLLAVKRIIKYVSG 1473

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            T N GL ++ DT+L L G+ D+DWGGNL+ RRST+GG  ++ +N++SWHSKK NCV+LS+
Sbjct: 1474 TINYGLNYTRDTSLVLVGYCDADWGGNLDDRRSTTGGVFFLGSNLISWHSKKQNCVSLSS 1533

Query: 987  SEAEYVAAGSCATQLLWLKRMLETTNLRWRVSQYSMTTPVP 1109
            +++EY+A GSC TQLLW+++M            Y MT P P
Sbjct: 1534 TQSEYIALGSCCTQLLWMRQM---------GLDYGMTFPDP 1565



 Score = 45.8 bits (107), Expect(2) = e-113
 Identities = 22/39 (56%), Positives = 28/39 (71%)
 Frame = +2

Query: 1094 DNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVENKILEV 1210
            DN SAI I+KN VQ   TKH+  R+HF+R+LVE K + V
Sbjct: 1571 DNESAIAISKNPVQHSVTKHIAIRHHFVRELVEEKQITV 1609


>gb|ABN08974.1| gag-pol polyprotein, putative [Medicago truncatula]
          Length = 469

 Score =  384 bits (985), Expect(2) = e-108
 Identities = 182/323 (56%), Positives = 250/323 (77%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            AC LK  L QMDVK+AFLNG L EE +VEQPKGF +P+ PDHVY+L + +YGLKQAP AW
Sbjct: 82   ACILKFKLFQMDVKSAFLNGYLHEEVFVEQPKGFIDPNFPDHVYKLKKALYGLKQAPRAW 141

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RLT++L+  G+ +G  DKTLF+K E   +++AQIYVDDIVFG  ++ ++  FV+ M +
Sbjct: 142  YERLTEFLINQGYKKGGTDKTLFVKKEHGGVMIAQIYVDDIVFGGMSNQMVQHFVQQMQS 201

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             FEMS+VG L+ FLGLQ++Q++D +F++QSKYAK +V++FGL++A H +TP  T  KL+K
Sbjct: 202  EFEMSLVGELTYFLGLQIRQMEDTIFISQSKYAKNIVRKFGLDNASHKRTPTATHLKLSK 261

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
             E G+ VD  +Y SMIGSLLYLT++RPDI ++V +CAR+QA P+ SHL  VKRI++YV G
Sbjct: 262  DENGVAVDQSLYRSMIGSLLYLTASRPDITFAVGVCARYQAEPKMSHLAQVKRILKYVNG 321

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            TT+ G+ +S+  N  L G+ D+DW G+ + R+STSGG  ++ NN+VSW SKK N V+LST
Sbjct: 322  TTDYGVLYSHSNNSQLIGYCDADWAGSADDRKSTSGGCFFLGNNLVSWFSKKQNSVSLST 381

Query: 987  SEAEYVAAGSCATQLLWLKRMLE 1055
            +EAEY+AA S  +QL+W+K+MLE
Sbjct: 382  AEAEYIAAESSCSQLVWMKQMLE 404



 Score = 38.5 bits (88), Expect(2) = e-108
 Identities = 14/21 (66%), Positives = 20/21 (95%)
 Frame = +2

Query: 1142 RTKHVDTRYHFLRDLVENKIL 1204
            RTKH+D R+HF+RDLVE+K++
Sbjct: 410  RTKHIDIRHHFIRDLVEDKVV 430


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  398 bits (1022), Expect = e-107
 Identities = 189/327 (57%), Positives = 257/327 (78%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            AC LK  L+QMDVK+AFLNG L EEAYVEQPKGF +P  PDHVY+L + +YGLKQAP AW
Sbjct: 1166 ACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAW 1225

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RLT++L + G+ +G  DKTLF+K + + L++AQIYVDDIVFG  ++++L  FV+ M +
Sbjct: 1226 YERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQS 1285

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             FEMS+VG L+ FLGLQVKQ++D +F++QSKYAK +VK+FG+E+A H +TP  T  KL+K
Sbjct: 1286 EFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSK 1345

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
             EAG  VD  +Y SMIGSLLYLT++RPDI Y+V +CAR+QA+P+ SHL  VKRI++YV G
Sbjct: 1346 DEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNG 1405

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            T++ G+ + + +   L G+ D+DW G+ + R+STSGG  Y+ NN++SW SKK NCV+LST
Sbjct: 1406 TSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLST 1465

Query: 987  SEAEYVAAGSCATQLLWLKRMLETTNL 1067
            +EAEY+AAGS  +QL+W+K+ML+  N+
Sbjct: 1466 AEAEYIAAGSSCSQLVWMKQMLKEYNV 1492



 Score = 63.9 bits (154), Expect = 5e-07
 Identities = 26/66 (39%), Positives = 48/66 (72%)
 Frame = +2

Query: 1007 SGELCYSTTVVEKDVGDYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDL 1186
            +G  C     +++ + +Y +E + +T++ DN SAI+I+KN VQ  RTKH+D R+H++R+L
Sbjct: 1473 AGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIREL 1532

Query: 1187 VENKIL 1204
            V++K++
Sbjct: 1533 VDDKVI 1538


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  397 bits (1020), Expect = e-107
 Identities = 188/327 (57%), Positives = 257/327 (78%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            AC LK  L+QMDVK+AFLNG L EE YVEQPKGF +P  PDHVY+L + +YGLKQAP AW
Sbjct: 1163 ACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAW 1222

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RLT++L + G+ +G  DKTLF+K + + L++AQIYVDDIVFG  ++++L  FV+ M +
Sbjct: 1223 YERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQS 1282

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             FEMS+VG L+ FLGLQVKQ++D +F++QS+YAK +VK+FG+E+A H +TP  T  KL+K
Sbjct: 1283 EFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSK 1342

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
             EAG  VD  +Y SMIGSLLYLT++RPDI Y+V +CAR+QA+P+ SHL  VKRI++YV G
Sbjct: 1343 DEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNG 1402

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            T++ G+ + + +N  L G+ D+DW G+ + R+STSGG  Y+ NN++SW SKK NCV+LST
Sbjct: 1403 TSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLST 1462

Query: 987  SEAEYVAAGSCATQLLWLKRMLETTNL 1067
            +EAEY+AAGS  +QL+W+K+ML+  N+
Sbjct: 1463 AEAEYIAAGSSCSQLVWMKQMLKEYNV 1489



 Score = 65.5 bits (158), Expect = 2e-07
 Identities = 27/66 (40%), Positives = 48/66 (72%)
 Frame = +2

Query: 1007 SGELCYSTTVVEKDVGDYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDL 1186
            +G  C     +++ + +Y +E + +T++ DN SAI+I+KN VQ  RTKH+D R+H++RDL
Sbjct: 1470 AGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDL 1529

Query: 1187 VENKIL 1204
            V++K++
Sbjct: 1530 VDDKVI 1535


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  397 bits (1020), Expect = e-107
 Identities = 188/327 (57%), Positives = 257/327 (78%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            AC LK  L+QMDVK+AFLNG L EE YVEQPKGF +P  PDHVY+L + +YGLKQAP AW
Sbjct: 1165 ACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAW 1224

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RLT++L + G+ +G  DKTLF+K + + L++AQIYVDDIVFG  ++++L  FV+ M +
Sbjct: 1225 YERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQS 1284

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             FEMS+VG L+ FLGLQVKQ++D +F++QS+YAK +VK+FG+E+A H +TP  T  KL+K
Sbjct: 1285 EFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSK 1344

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
             EAG  VD  +Y SMIGSLLYLT++RPDI Y+V +CAR+QA+P+ SHL  VKRI++YV G
Sbjct: 1345 DEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNG 1404

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            T++ G+ + + +N  L G+ D+DW G+ + R+STSGG  Y+ NN++SW SKK NCV+LST
Sbjct: 1405 TSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLST 1464

Query: 987  SEAEYVAAGSCATQLLWLKRMLETTNL 1067
            +EAEY+AAGS  +QL+W+K+ML+  N+
Sbjct: 1465 AEAEYIAAGSSCSQLVWMKQMLKEYNV 1491



 Score = 65.5 bits (158), Expect = 2e-07
 Identities = 27/66 (40%), Positives = 48/66 (72%)
 Frame = +2

Query: 1007 SGELCYSTTVVEKDVGDYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDL 1186
            +G  C     +++ + +Y +E + +T++ DN SAI+I+KN VQ  RTKH+D R+H++RDL
Sbjct: 1472 AGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDL 1531

Query: 1187 VENKIL 1204
            V++K++
Sbjct: 1532 VDDKVI 1537


>ref|XP_004310161.1| PREDICTED: uncharacterized protein LOC101309698 [Fragaria vesca
            subsp. vesca]
          Length = 1541

 Score =  395 bits (1014), Expect = e-107
 Identities = 188/322 (58%), Positives = 252/322 (78%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            A YLK  L+QMDVK+AFLNG+L+EE YVEQP GF++   PD VY+L +V+YGLKQAP AW
Sbjct: 1132 AYYLKFTLYQMDVKSAFLNGILKEEVYVEQPPGFQSLTHPDCVYKLDKVLYGLKQAPRAW 1191

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RL+++L++ G+ RG  DKT+F+K   + +I+AQIYVDDIVFG+T+  L+  F + M  
Sbjct: 1192 YERLSNHLVDHGYVRGSVDKTMFVKCTTEHIIIAQIYVDDIVFGSTSPSLVNEFTELMKK 1251

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             FEMS+ G LS FLGLQV Q ++G+F+ QSKYA++LVK+FG+E A    TPM TS K++ 
Sbjct: 1252 EFEMSLCGKLSYFLGLQVMQNQNGLFICQSKYAQDLVKKFGMETATAFPTPMSTSCKISA 1311

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
              +GI VD   Y SMIGSL+YLT++RPDI YSV +CAR+QA+P++SH+K VKRIIRYV G
Sbjct: 1312 DMSGINVDQTNYRSMIGSLMYLTASRPDIAYSVGVCARYQANPKQSHVKAVKRIIRYVAG 1371

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            T + G+ ++ DTN+ + G+TDSDW G+   R+STSGG  ++ NN+VSWHSKK NC +LST
Sbjct: 1372 TLDHGIKYTFDTNVEIAGYTDSDWAGDANDRKSTSGGCFFVGNNLVSWHSKKQNCTSLST 1431

Query: 987  SEAEYVAAGSCATQLLWLKRML 1052
            ++AEYVAAGSC TQL+W+K+M+
Sbjct: 1432 AQAEYVAAGSCCTQLMWMKQMV 1453



 Score = 66.2 bits (160), Expect = 9e-08
 Identities = 30/71 (42%), Positives = 47/71 (66%)
 Frame = +2

Query: 1007 SGELCYSTTVVEKDVGDYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDL 1186
            +G  C     +++ V DY  +  ++++F DNTSAI+I+KN V   RTKH++ RYH +R L
Sbjct: 1439 AGSCCTQLMWMKQMVADYGFQQGTLSLFCDNTSAINISKNPVLHSRTKHIEIRYHLIRGL 1498

Query: 1187 VENKILEVLML 1219
            VE K+LE+  +
Sbjct: 1499 VEEKLLELTFI 1509


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  394 bits (1013), Expect = e-106
 Identities = 187/327 (57%), Positives = 256/327 (78%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            AC LK  L+QMDVK+AFLNG L EE YVEQPKGF +P  PDHVY+L + +YGLKQAP AW
Sbjct: 1165 ACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALYGLKQAPRAW 1224

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RLT++L + G+ +G  DKTLF+K + + L++AQIYVDDIVFG  ++++L  FV+ M +
Sbjct: 1225 YERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQS 1284

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             FEMS+VG L+ FLGLQVKQ++D +F++QS+YAK +VK+FG+E+A H +TP  T  KL+K
Sbjct: 1285 EFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSK 1344

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
             EAG  VD   Y SMIGSLLYLT++RPDI Y+V +CAR+QA+P+ SHL  VKRI++YV G
Sbjct: 1345 DEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNG 1404

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            T++ G+ + + ++  L G+ D+DW G+ + R+STSGG  Y+ NN++SW SKK NCV+LST
Sbjct: 1405 TSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLST 1464

Query: 987  SEAEYVAAGSCATQLLWLKRMLETTNL 1067
            +EAEY+AAGS  +QL+W+K+ML+  N+
Sbjct: 1465 AEAEYIAAGSSCSQLVWMKQMLKEYNV 1491



 Score = 65.5 bits (158), Expect = 2e-07
 Identities = 27/66 (40%), Positives = 48/66 (72%)
 Frame = +2

Query: 1007 SGELCYSTTVVEKDVGDYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDL 1186
            +G  C     +++ + +Y +E + +T++ DN SAI+I+KN VQ  RTKH+D R+H++RDL
Sbjct: 1472 AGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDL 1531

Query: 1187 VENKIL 1204
            V++K++
Sbjct: 1532 VDDKVI 1537


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score =  392 bits (1006), Expect = e-106
 Identities = 187/327 (57%), Positives = 255/327 (77%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            AC LK  L+QMDVK+AFLNG L EEAYVEQPKGF +P  PDHVY+L + +YGLKQAP AW
Sbjct: 1139 ACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALYGLKQAPRAW 1198

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RLT++L + G+ +G  DKTLF+K + + L++AQIYVDDIVFG  ++++L  FV+ M +
Sbjct: 1199 YERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQS 1258

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             FEMS+VG L+ FLGLQVKQ++D +F++QSKYAK +VK+FG+E+A H +TP  T  KL+K
Sbjct: 1259 EFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSK 1318

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
             EAG  VD  +Y SMIGSLLYLT++RPDI Y+V  CAR+QA+P+ SHL  VKRI++YV G
Sbjct: 1319 DEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGGCARYQANPKISHLNQVKRILKYVNG 1378

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            T++ G+ + + ++  L G+ D+DW G+++ R+ST GG  Y+  N +SW SKK NCV+LST
Sbjct: 1379 TSDYGIMYCHCSDSMLVGYCDADWAGSVDDRKSTFGGCFYLGTNFISWFSKKQNCVSLST 1438

Query: 987  SEAEYVAAGSCATQLLWLKRMLETTNL 1067
            +EAEY+AAGS  +QL+W+K+ML+  N+
Sbjct: 1439 AEAEYIAAGSSCSQLVWMKQMLKEYNV 1465



 Score = 65.5 bits (158), Expect = 2e-07
 Identities = 27/66 (40%), Positives = 48/66 (72%)
 Frame = +2

Query: 1007 SGELCYSTTVVEKDVGDYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDL 1186
            +G  C     +++ + +Y +E + +T++ DN SAI+I+KN VQ  RTKH+D R+H++RDL
Sbjct: 1446 AGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNLSAINISKNPVQHSRTKHIDIRHHYIRDL 1505

Query: 1187 VENKIL 1204
            V++K++
Sbjct: 1506 VDDKVI 1511


>ref|XP_006577547.1| PREDICTED: uncharacterized protein LOC102662042 [Glycine max]
          Length = 1857

 Score =  388 bits (996), Expect = e-104
 Identities = 185/327 (56%), Positives = 253/327 (77%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            AC LK  L+QMDVK+AFLNG L EE YVEQPKGF +P  PDHVY+L + +YGLKQAP AW
Sbjct: 1461 ACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYKLKKALYGLKQAPRAW 1520

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RLT +L + G+ +G  DKTL +K + + L++AQIYVDDIVFG  ++++L  FV+ M  
Sbjct: 1521 YERLTKFLTQQGYRKGGIDKTLLVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQF 1580

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             FEMS+VG L+ FLGLQVKQ++D +F++QSKYAK +VK+FG+E+A H +TP  T  KL+K
Sbjct: 1581 EFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSK 1640

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
             EAG  VD  +Y SMIGSLLYLT++RPDI ++V +CAR+QA+P+ SHL  VKRI++YV G
Sbjct: 1641 DEAGTSVDQSLYRSMIGSLLYLTASRPDITFAVGVCARYQANPKISHLNQVKRILKYVNG 1700

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            T++ G+ + + ++  L G+ D+DW G+ + R+STSGG  Y+ NN+++W SKK NCV+LST
Sbjct: 1701 TSDYGIMYCHCSDSMLVGYCDADWVGSADDRKSTSGGGFYLGNNLIAWFSKKQNCVSLST 1760

Query: 987  SEAEYVAAGSCATQLLWLKRMLETTNL 1067
            +EAEY+AAGS  +QL+W+K ML+  N+
Sbjct: 1761 AEAEYIAAGSSCSQLVWMKEMLKEYNV 1787



 Score = 65.5 bits (158), Expect = 2e-07
 Identities = 27/66 (40%), Positives = 48/66 (72%)
 Frame = +2

Query: 1007 SGELCYSTTVVEKDVGDYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDL 1186
            +G  C     +++ + +Y +E + +T++ DN SAI+I+KN VQ  RTKH+D R+H++RDL
Sbjct: 1768 AGSSCSQLVWMKEMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRDL 1827

Query: 1187 VENKIL 1204
            V++K++
Sbjct: 1828 VDDKVI 1833


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  387 bits (993), Expect = e-104
 Identities = 185/327 (56%), Positives = 253/327 (77%)
 Frame = +3

Query: 87   ACYLKIPLHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAW 266
            AC LK  L+QMDVK+AFLNG L EEAYVEQPKGF +P   DHVY+L + +YGLKQAP AW
Sbjct: 1165 ACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHLDHVYRLKKALYGLKQAPRAW 1224

Query: 267  YSRLTDYLLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMST 446
            Y RLT++L + G+ +G  DKTLF+K + + L++AQIYVDDIVFG  ++++L  FV  M +
Sbjct: 1225 YERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVPQMQS 1284

Query: 447  TFEMSMVGTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTK 626
             FEMS+VG L  FLGLQVKQ++D +F++QSKYAK +VK+FG+E+A H +TP  T  KL+K
Sbjct: 1285 EFEMSLVGELHYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSK 1344

Query: 627  IEAGIEVDPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVG 806
             EAG  VD  +Y SMIGSLLYLT++RPDI ++V +CAR+QA+P+ SHL  VKRI++YV G
Sbjct: 1345 DEAGTSVDQNLYRSMIGSLLYLTASRPDITFAVGVCARYQANPKISHLNQVKRILKYVNG 1404

Query: 807  TTNLGLWFSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLST 986
            T++ G+ + + ++  L G+ D+DW G+ + R+ TSGG  Y+  N++SW SKK NCV+LST
Sbjct: 1405 TSDYGIMYCHCSDSMLVGYCDADWAGSADDRKCTSGGCFYLGTNLISWFSKKQNCVSLST 1464

Query: 987  SEAEYVAAGSCATQLLWLKRMLETTNL 1067
            +EAEY+AAGS  +QL+W+K+ML+  N+
Sbjct: 1465 AEAEYIAAGSSCSQLVWMKQMLKEYNV 1491



 Score = 65.9 bits (159), Expect = 1e-07
 Identities = 28/66 (42%), Positives = 48/66 (72%)
 Frame = +2

Query: 1007 SGELCYSTTVVEKDVGDYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDL 1186
            +G  C     +++ + +Y +E + +T++ DN SAI+I+KN VQ  RTKH+D R+H++RDL
Sbjct: 1472 AGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHNRTKHIDIRHHYIRDL 1531

Query: 1187 VENKIL 1204
            V++KI+
Sbjct: 1532 VDDKII 1537


>gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1419

 Score =  337 bits (863), Expect(2) = e-102
 Identities = 164/316 (51%), Positives = 227/316 (71%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L+QMDVK+AFLNG ++EE YV+QP GFENP  P+HV++L + +YGLKQAP AWY RL ++
Sbjct: 1014 LYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDRLKNF 1073

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL  GF  G+ DKTLF+    D  +  QIYVDDI+FG +   ++  F + M   FEMSM+
Sbjct: 1074 LLAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDDIIFGCSTHAVVVDFAETMRREFEMSMM 1133

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G LS FLGLQ+KQ   G FV Q+KY K+L++RF +E+ K + TP+G++  L   E G  V
Sbjct: 1134 GELSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGEAV 1193

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++RPDI ++VCLCARFQASPR SH + VKRI+RY+  T   G+W
Sbjct: 1194 DQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMRYLNHTLEFGIW 1253

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  +++ L+G++D+D+GG    R+STSG   ++  ++++W S+K + V  ST+E+EYVA
Sbjct: 1254 YSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYVA 1313

Query: 1008 AGSCATQLLWLKRMLE 1055
            A SC +Q+LWL   L+
Sbjct: 1314 AASCCSQILWLLSTLK 1329



 Score = 64.3 bits (155), Expect(2) = e-102
 Identities = 31/60 (51%), Positives = 40/60 (66%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVENKILEVLMLHAGLK 1234
            DY +  E + +F DNTSAI+I KN VQ  RTKH+D R+HFLRD VE   +E+  L   L+
Sbjct: 1330 DYGITFEKVPLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQ 1389


>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108712101|gb|ABF99896.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1969

 Score =  341 bits (875), Expect(2) = e-101
 Identities = 174/320 (54%), Positives = 227/320 (70%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L QMDVK+AFLNGV+EEE YV+QP GFENP  P+HV++L + +YGLKQAP AWY RL  +
Sbjct: 1390 LFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTF 1449

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL+ GF  G  DKTLF        ++ QIYVDDI+FG ++  L+A+F   MS  FEMSM+
Sbjct: 1450 LLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMM 1509

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G L+ FLGLQ+KQ K+G+FV Q+KY+KEL+K+F + D K + TPM T+  L   E G EV
Sbjct: 1510 GELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEV 1569

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++RPDI +SVCLCARFQASPR SH + VKRI RY+  T   G+W
Sbjct: 1570 DQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIW 1629

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  + LS+  F+D+D+ G    R+STSG   ++  ++VSW S+K + V  ST+EAEYVA
Sbjct: 1630 YSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVA 1689

Query: 1008 AGSCATQLLWLKRMLETTNL 1067
            A S  +Q+LW+   L+   L
Sbjct: 1690 AASACSQVLWMISTLKDYGL 1709



 Score = 58.9 bits (141), Expect(2) = e-101
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVE 1192
            DY L    + +  DNTSAI+I KN VQ  RTKH++ RYHFLRD VE
Sbjct: 1706 DYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVE 1751


>gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1799

 Score =  341 bits (875), Expect(2) = e-101
 Identities = 174/320 (54%), Positives = 227/320 (70%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L QMDVK+AFLNGV+EEE YV+QP GFENP  P+HV++L + +YGLKQAP AWY RL  +
Sbjct: 1394 LFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTF 1453

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL+ GF  G  DKTLF        ++ QIYVDDI+FG ++  L+A+F   MS  FEMSM+
Sbjct: 1454 LLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFFDVMSREFEMSMM 1513

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G L+ FLGLQ+KQ K+G+FV Q+KY+KEL+K+F + D K + TPM T+  L   E G EV
Sbjct: 1514 GELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEV 1573

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++RPDI +SVCLCARFQASPR SH + VKRI RY+  T   G+W
Sbjct: 1574 DQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIW 1633

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  + LS+  F+D+D+ G    R+STSG   ++  ++VSW S+K + V  ST+EAEYVA
Sbjct: 1634 YSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVA 1693

Query: 1008 AGSCATQLLWLKRMLETTNL 1067
            A S  +Q+LW+   L+   L
Sbjct: 1694 AASACSQVLWMISTLKDYGL 1713



 Score = 58.9 bits (141), Expect(2) = e-101
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVE 1192
            DY L    + +  DNTSAI+I KN VQ  RTKH++ RYHFLRD VE
Sbjct: 1710 DYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVE 1755


>emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]
          Length = 2256

 Score =  340 bits (872), Expect(2) = e-101
 Identities = 173/320 (54%), Positives = 227/320 (70%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L QMDVK+AFLNGV+EEE YV+QP GFENP  P+HV++L + +YGLKQAP AWY RL  +
Sbjct: 1369 LFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTF 1428

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL+ GF  G  DKTLF        ++ QIYVDDI+FG ++  L+A+F   MS  FEMSM+
Sbjct: 1429 LLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMM 1488

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G L+ FLGLQ+KQ K+G+FV Q+KY+KEL+K+F + D K + TPM T+  L   E G EV
Sbjct: 1489 GELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEV 1548

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++RPDI +SVCLCARFQASPR SH + VKR+ RY+  T   G+W
Sbjct: 1549 DQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIW 1608

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  + LS+  F+D+D+ G    R+STSG   ++  ++VSW S+K + V  ST+EAEYVA
Sbjct: 1609 YSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVA 1668

Query: 1008 AGSCATQLLWLKRMLETTNL 1067
            A S  +Q+LW+   L+   L
Sbjct: 1669 AASACSQVLWMISTLKDYGL 1688



 Score = 58.9 bits (141), Expect(2) = e-101
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVE 1192
            DY L    + +  DNTSAI+I KN VQ  RTKH++ RYHFLRD VE
Sbjct: 1685 DYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVE 1730


>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
            Group]
          Length = 2145

 Score =  340 bits (872), Expect(2) = e-101
 Identities = 173/320 (54%), Positives = 227/320 (70%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L QMDVK+AFLNGV+EEE YV+QP GFENP  P+HV++L + +YGLKQAP AWY RL  +
Sbjct: 1390 LFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTF 1449

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL+ GF  G  DKTLF        ++ QIYVDDI+FG ++  L+A+F   MS  FEMSM+
Sbjct: 1450 LLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMM 1509

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G L+ FLGLQ+KQ K+G+FV Q+KY+KEL+K+F + D K + TPM T+  L   E G EV
Sbjct: 1510 GELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEV 1569

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++RPDI +SVCLCARFQASPR SH + VKR+ RY+  T   G+W
Sbjct: 1570 DQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIW 1629

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  + LS+  F+D+D+ G    R+STSG   ++  ++VSW S+K + V  ST+EAEYVA
Sbjct: 1630 YSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVA 1689

Query: 1008 AGSCATQLLWLKRMLETTNL 1067
            A S  +Q+LW+   L+   L
Sbjct: 1690 AASACSQVLWMISTLKDYGL 1709



 Score = 58.9 bits (141), Expect(2) = e-101
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVE 1192
            DY L    + +  DNTSAI+I KN VQ  RTKH++ RYHFLRD VE
Sbjct: 1706 DYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVE 1751


>gb|ABF93543.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 2124

 Score =  340 bits (872), Expect(2) = e-101
 Identities = 173/320 (54%), Positives = 227/320 (70%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L QMDVK+AFLNGV+EEE YV+QP GFENP  P+HV++L + +YGLKQAP AWY RL  +
Sbjct: 1369 LFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTF 1428

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL+ GF  G  DKTLF        ++ QIYVDDI+FG ++  L+A+F   MS  FEMSM+
Sbjct: 1429 LLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMM 1488

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G L+ FLGLQ+KQ K+G+FV Q+KY+KEL+K+F + D K + TPM T+  L   E G EV
Sbjct: 1489 GELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEV 1548

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++RPDI +SVCLCARFQASPR SH + VKR+ RY+  T   G+W
Sbjct: 1549 DQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIW 1608

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  + LS+  F+D+D+ G    R+STSG   ++  ++VSW S+K + V  ST+EAEYVA
Sbjct: 1609 YSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVA 1668

Query: 1008 AGSCATQLLWLKRMLETTNL 1067
            A S  +Q+LW+   L+   L
Sbjct: 1669 AASACSQVLWMISTLKDYGL 1688



 Score = 58.9 bits (141), Expect(2) = e-101
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVE 1192
            DY L    + +  DNTSAI+I KN VQ  RTKH++ RYHFLRD VE
Sbjct: 1685 DYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVE 1730


>gb|ABF94836.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1948

 Score =  340 bits (872), Expect(2) = e-101
 Identities = 173/320 (54%), Positives = 227/320 (70%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L QMDVK+AFLNGV+EEE YV+QP GFENP  P+HV++L + +YGLKQAP AWY RL  +
Sbjct: 1369 LFQMDVKSAFLNGVIEEEVYVKQPPGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTF 1428

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL+ GF  G  DKTLF        ++ QIYVDDI+FG ++  L+A+F   MS  FEMSM+
Sbjct: 1429 LLQNGFEMGAVDKTLFTLHSGIDFLLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMM 1488

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G L+ FLGLQ+KQ K+G+FV Q+KY+KEL+K+F + D K + TPM T+  L   E G EV
Sbjct: 1489 GELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEV 1548

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++RPDI +SVCLCARFQASPR SH + VKR+ RY+  T   G+W
Sbjct: 1549 DQREYRSMIGSLLYLTASRPDIHFSVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIW 1608

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  + LS+  F+D+D+ G    R+STSG   ++  ++VSW S+K + V  ST+EAEYVA
Sbjct: 1609 YSCSSALSVRAFSDADFAGCKIDRKSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVA 1668

Query: 1008 AGSCATQLLWLKRMLETTNL 1067
            A S  +Q+LW+   L+   L
Sbjct: 1669 AASACSQVLWMISTLKDYGL 1688



 Score = 58.9 bits (141), Expect(2) = e-101
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVE 1192
            DY L    + +  DNTSAI+I KN VQ  RTKH++ RYHFLRD VE
Sbjct: 1685 DYGLSFSGVPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVE 1730


>gb|ABA97696.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1514

 Score =  333 bits (853), Expect(2) = e-101
 Identities = 164/320 (51%), Positives = 228/320 (71%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L+QMDVK+AFLNG ++EE YV+QP GFENP+ P+HV++L + +YGLKQAP AWY RL ++
Sbjct: 1109 LYQMDVKSAFLNGFIQEEVYVKQPPGFENPYFPNHVFKLSKALYGLKQAPRAWYDRLKNF 1168

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL  GF  G+ DKTLF+    D  +   IYVDDI+FG +   L+  F + M   FEMSM+
Sbjct: 1169 LLVKGFTMGKVDKTLFVLKHGDNQLFVHIYVDDIIFGCSTHALVVDFAETMRREFEMSMM 1228

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G LS FLGLQ+KQ   G FV Q+KY K+L++ F +E+ K + TP+G++  L   E G  V
Sbjct: 1229 GELSYFLGLQIKQTPQGTFVHQTKYMKDLLRLFKMENCKPISTPIGSTAVLDPDEDGEAV 1288

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++ PDI +SVCLCARFQASPR+SH + VKRI+RY+  T   G+W
Sbjct: 1289 DQKEYRSMIGSLLYLTASWPDIQFSVCLCARFQASPRDSHRQAVKRIMRYLNHTLEFGIW 1348

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  +++ L+G++D+D+GG    R+STSG   ++  ++++W S+K + V  ST+E+EYVA
Sbjct: 1349 YSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYVA 1408

Query: 1008 AGSCATQLLWLKRMLETTNL 1067
            A SC +Q+LWL   L+  +L
Sbjct: 1409 ATSCCSQILWLLSTLKDYDL 1428



 Score = 64.7 bits (156), Expect(2) = e-101
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVENKILEV 1210
            DY L  E +++F DNTSAI+I KN VQ  RTKH+D R+HFLRD VE   +E+
Sbjct: 1425 DYDLTFEKVSLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVEM 1476


>gb|AAX96565.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77552672|gb|ABA95469.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 709

 Score =  330 bits (847), Expect(2) = e-100
 Identities = 164/320 (51%), Positives = 226/320 (70%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L+QMDVK+AFLNG ++EE Y++QP GFENP  P+HV++L +  YGLKQAP AWY RL ++
Sbjct: 304  LYQMDVKSAFLNGFIQEEVYIKQPPGFENPDFPNHVFKLSKAFYGLKQAPRAWYDRLKNF 363

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL  GF  G+ DKTLF+    D  +  QIYVDDI+FG +   L+  F + M   FEMSM+
Sbjct: 364  LLAKGFTMGKFDKTLFVLKHGDNQLFVQIYVDDIIFGCSIHALVVDFAETMRREFEMSMM 423

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G LS FLGLQ+KQ   G FV Q+KY K+L++RF +E+ K + TP+G++  L   E G  V
Sbjct: 424  GELSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTAVLDPDEDGKAV 483

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++RPDI ++VCL ARFQASPR SH + VKRI+RY+  T   G+W
Sbjct: 484  DQKEYRSMIGSLLYLTASRPDIQFAVCLRARFQASPRASHRQAVKRIMRYLNHTLEFGIW 543

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  +++ L+G++D+D+GG    R+STSG   ++  ++++W S+K + V  ST+E+EYVA
Sbjct: 544  YSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSVAQSTAESEYVA 603

Query: 1008 AGSCATQLLWLKRMLETTNL 1067
            A SC +Q+LWL   L+   L
Sbjct: 604  AASCCSQILWLLSTLKDYGL 623



 Score = 65.5 bits (158), Expect(2) = e-100
 Identities = 32/60 (53%), Positives = 40/60 (66%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVENKILEVLMLHAGLK 1234
            DY L  E + +F DNTSAI+I KN VQ  RTKH+D R+HFLRD VE   +E+  L   L+
Sbjct: 620  DYGLTFEKVHLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHVEKGDVELQFLDTNLQ 679


>gb|ABA98847.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1417

 Score =  328 bits (841), Expect(2) = e-100
 Identities = 163/320 (50%), Positives = 224/320 (70%)
 Frame = +3

Query: 108  LHQMDVKAAFLNGVLEEEAYVEQPKGFENPHAPDHVYQLHRVVYGLKQAPGAWYSRLTDY 287
            L+QMDVK+AFLNG ++EE YV+QP GFENP  P+HV++L + +YGLKQAP AWY RL ++
Sbjct: 1012 LYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQAPRAWYDRLKNF 1071

Query: 288  LLEFGFFRGEADKTLFIKIEKDQLIVAQIYVDDIVFGATNDDLLARFVKGMSTTFEMSMV 467
            LL  GF  G+ DKTLF+    D  +  QIYVDDI+FG +   L+  F + M   FEMSM+
Sbjct: 1072 LLAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDDIIFGCSTHALVVDFAETMRREFEMSMM 1131

Query: 468  GTLSNFLGLQVKQLKDGMFVTQSKYAKELVKRFGLEDAKHMKTPMGTSEKLTKIEAGIEV 647
            G LS FL LQ+KQ   G FV Q+KY K+L++R  +E+ K + TP+G++  L   E G  V
Sbjct: 1132 GELSYFLRLQIKQTPQGTFVHQTKYTKDLLRRLKMENCKPISTPIGSTAVLDPDEDGEVV 1191

Query: 648  DPIVYCSMIGSLLYLTSTRPDILYSVCLCARFQASPRESHLKVVKRIIRYVVGTTNLGLW 827
            D   Y SMIGSLLYLT++RPDI ++VCLCARFQASPR SH + VKRI+RY+  T    +W
Sbjct: 1192 DQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRTSHRQAVKRIMRYLNHTLEFRIW 1251

Query: 828  FSNDTNLSLTGFTDSDWGGNLERRRSTSGGYCYIDNNIVSWHSKK*NCVTLSTSEAEYVA 1007
            +S  +++ L+G++D+D+GG    R+STSG   ++  +++ W S+K + V  ST+E+EYVA
Sbjct: 1252 YSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIGWSSRKQSSVGQSTAESEYVA 1311

Query: 1008 AGSCATQLLWLKRMLETTNL 1067
            A SC +Q+LWL   L+   L
Sbjct: 1312 AASCCSQILWLLSTLKDYGL 1331



 Score = 66.6 bits (161), Expect(2) = e-100
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = +2

Query: 1055 DYKLEVESITIFYDNTSAIHITKNHVQFGRTKHVDTRYHFLRDLVENKILEVLMLHAGLK 1234
            DY L  E + +F DNTSAI+I KN VQ+ RTKH+D R+HFLRD VE   +E+  L   L+
Sbjct: 1328 DYGLTFEKVPLFCDNTSAINIAKNPVQYSRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQ 1387