BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha28_contig00006581
         (4846 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus...  1980   0.0  
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise...  1858   0.0  
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...  1843   0.0  
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...  1836   0.0  
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...  1804   0.0  
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...  1778   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...  1770   0.0  
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...  1763   0.0  
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...  1704   0.0  
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...  1675   0.0  
gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus...  1669   0.0  
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...  1658   0.0  
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...  1643   0.0  
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g...  1641   0.0  
ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s...  1630   0.0  
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s...  1627   0.0  
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas...  1625   0.0  
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...  1624   0.0  
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...  1619   0.0  
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...  1613   0.0  

>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
          Length = 1394

 Score = 1980 bits (5130), Expect = 0.0
 Identities = 1015/1424 (71%), Positives = 1164/1424 (81%), Gaps = 7/1424 (0%)
 Frame = +2

Query: 332  RDQGSMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGL 511
            +  G++QFTK+PY+EDVGPR+IESIQFST S  ++ K  EV+V +  YYDE RKP+  GL
Sbjct: 2    KKSGTIQFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGL 61

Query: 512  LDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRI 691
            LD  MGP NKS  C+TC   F +CPGH G+L LALPV+NVG+  TI+ I+KCICK CSR+
Sbjct: 62   LDQRMGPANKSILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRV 121

Query: 692  LLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVKR 871
            LL +KD Q FL++MRNPK E LKK +I K +V KCNS+ G +++AV+CSRCGY+NG VK+
Sbjct: 122  LLADKDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAG-SKRAVKCSRCGYINGMVKK 180

Query: 872  --QQLKIIHERKDIADNGLDEFRSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCE 1036
              + LKI H+R  + DN LDE RSAL+HT+    N  + STID K  Y LL+NM DEDCE
Sbjct: 181  AKEPLKIQHDRAKVVDNCLDERRSALAHTKDIKGNPVVISTIDPKTAYHLLENMLDEDCE 240

Query: 1037 LLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE 1216
            LLYL+DRPEKL+VT+ILVPP AIRPSVF      SNENDIT RLK IIQ NA +  EM++
Sbjct: 241  LLYLHDRPEKLIVTNILVPPIAIRPSVFSTRA-MSNENDITSRLKQIIQINAAVLQEMSD 299

Query: 1217 --TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLS 1390
              ++SQ   +NW+ L+ EVAQYINS+ R     S+ N++PLSGF+QRLKGKQGRFRGNLS
Sbjct: 300  QSSQSQSLTNNWDSLQVEVAQYINSDVRVPLQYSE-NTKPLSGFVQRLKGKQGRFRGNLS 358

Query: 1391 GKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPG 1570
            GKRVEFTGRTVISPDPNLKI EVAVPILMA+IL+YPERVSHHNIE+LRQ VRNGP KYPG
Sbjct: 359  GKRVEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPTKYPG 418

Query: 1571 AKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRA 1750
            AKFIK PDG EISL  + R   AD L+YG IV RHL+DGD++LFNRQPSLHRMSIMSHRA
Sbjct: 419  AKFIKHPDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRA 478

Query: 1751 RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 1930
            RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEIL
Sbjct: 479  RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 538

Query: 1931 VASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLF 2110
            VASTQDFLTSS+LITRKDTFYDR++FSL+CSY+GDAMD IDLPTPALVKPVELWTGKQLF
Sbjct: 539  VASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTGKQLF 598

Query: 2111 SVLLRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 2290
            S+LLRPHAKMRVY+NLTVAEK+Y KS ETMCPKDGFVYIRNSELISGQLGKATLGNG+KD
Sbjct: 599  SILLRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLGNGSKD 658

Query: 2291 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 2470
            G+YSVLLRDY  HAAATCMNRLAKLSARWIGNHGFSIGINDVQPG  LNKEKKVTID  Y
Sbjct: 659  GLYSVLLRDYSAHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGIVLNKEKKVTIDKGY 718

Query: 2471 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 2650
            G C DYI  Y SGSL+L PGC++AETLE+ I+ TLNNIRE TANVCM NL+WRNSPLIMS
Sbjct: 719  GQCIDYIGSYKSGSLDLLPGCNNAETLEANITGTLNNIRERTANVCMNNLHWRNSPLIMS 778

Query: 2651 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 2830
            QC             ACVGQQSVGGRRAPNGF+DRTLPHFE+ AKDPDAKGFVQNSFYTG
Sbjct: 779  QCDG-----------ACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTG 827

Query: 2831 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 3010
            LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS+ YD TVRNAS CIVQFV
Sbjct: 828  LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDGTVRNASVCIVQFV 887

Query: 3011 YGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKS 3190
            YGGDAMDP QMEEK+GLPLNFERLFMKAKATCPA++QK L+ +EI + + E I  +L +S
Sbjct: 888  YGGDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSES 947

Query: 3191 SVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYH 3370
            + T EG    S     + +KEG ++ F  SL+ FI+KK P+S+L LKL  +EHS+ED+ +
Sbjct: 948  TATPEG--ESSQAFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHSDEDKGY 1005

Query: 3371 LENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 3550
            LE +ASNI G+T+ QLMVFL TCISRY+ KK                EPGTQMTLKTFHF
Sbjct: 1006 LEKIASNICGVTRQQLMVFLETCISRYRLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHF 1065

Query: 3551 AGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVKGRI 3730
            AGVASMNVTLGVPR            TP+I+  L                + A++VKGRI
Sbjct: 1066 AGVASMNVTLGVPRIKEIINAAKKINTPIISTAL----------QSDNNEIIAKIVKGRI 1115

Query: 3731 ERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQAQH 3910
            E+TLLEQVAKSIKTSQ SRS SI++TLD  +I GA LS+ A +VKESIL+T +MKL+ Q 
Sbjct: 1116 EKTLLEQVAKSIKTSQASRSTSIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQQ 1175

Query: 3911 INILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKE 4090
            + +LD  KLE+ +   DK      + QF LHGLK+++SKVVVKGI+T+ER II+NEAK++
Sbjct: 1176 VKVLDHRKLEIVMQ-ADKT-----KLQFELHGLKNKISKVVVKGIDTVERAIILNEAKEK 1229

Query: 4091 DPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTM 4270
            DP   KK+KLLVEGTGLL+VMG EGV+G  TTSNHI+EVQ  LGIEAARKKIIDEIQYTM
Sbjct: 1230 DPSANKKMKLLVEGTGLLSVMGIEGVEGRKTTSNHIIEVQHILGIEAARKKIIDEIQYTM 1289

Query: 4271 SSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNG 4450
            SSHGMTIDIRHMMLLADLMT KGEVLGITRYGVQ+M+DSVLMLASFE+T+DHLFNA+VNG
Sbjct: 1290 SSHGMTIDIRHMMLLADLMTSKGEVLGITRYGVQKMKDSVLMLASFERTSDHLFNASVNG 1349

Query: 4451 RVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPVKLTYGPDPII 4582
            RVDKIEGVSECIIMGIP+Q+GTGMLKVRQ+V P++LTYGPDPII
Sbjct: 1350 RVDKIEGVSECIIMGIPVQIGTGMLKVRQNVKPIELTYGPDPII 1393


>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
          Length = 1368

 Score = 1858 bits (4812), Expect = 0.0
 Identities = 946/1400 (67%), Positives = 1104/1400 (78%), Gaps = 3/1400 (0%)
 Frame = +2

Query: 347  MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 526
            +Q TKQPYIEDVG R+IESI FSTLSG+++ K + V+VY+G YYD  +KPV  GLLD  M
Sbjct: 1    LQSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRM 60

Query: 527  GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 706
            GPPNK   C TC  NF  CPGH G+L LALPV+NVGY+  IV I+KCICK CSR+LL+EK
Sbjct: 61   GPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEEK 120

Query: 707  DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVKRQQLKI 886
            +   FLR+MRNP+LE LKK D+ K IV +CNS  G N K  +C RCG++NG VKR   K+
Sbjct: 121  EHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSN-KLAKCPRCGHINGMVKRAPYKV 179

Query: 887  IHERKDIADNGLDEFRSALSHTQANV-SLPSTIDAKMVYELLKNMRDEDCELLYLNDRPE 1063
            +++R  + D+ ++E +SA    +A+  +  ST+DA  V+ LL+NM DEDCELLY++DRPE
Sbjct: 180  MYDRGRVIDSQMEECQSAGPSMKASRGNTTSTLDALFVFRLLRNMLDEDCELLYIHDRPE 239

Query: 1064 KLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-QRFLS 1240
            KLMVT+ILVPPTAIRPSVFVDGG QSNENDITERLK+II+ANA L  ++ ET   ++ ++
Sbjct: 240  KLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIYKKGVT 299

Query: 1241 NWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRT 1420
            +WE L+ EVAQYINS+ RGL      +S+PLSGF+QRLKGKQGRFRGNLSGKRVE+TGRT
Sbjct: 300  SWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRT 359

Query: 1421 VISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGH 1600
            VISPDPNLKITEVAVPILMA+ILTYPERVSH NI +LR+ VR GP +YPGAKFI+ PDG 
Sbjct: 360  VISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIRQPDGT 419

Query: 1601 EISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRF 1780
            EISL + +RK HAD L+YG IV RHL+DGD+VLFNRQPSLHRMSIM HRARIMPWRTLRF
Sbjct: 420  EISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRF 479

Query: 1781 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTS 1960
            NESVCNPYNADFDGDEMNMHVPQTEE+R EA+MLMGVQNNLCTPKNGE+LVASTQDFLTS
Sbjct: 480  NESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVASTQDFLTS 539

Query: 1961 SFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKM 2140
            SFLITRKDTFYDRSAFSL+C+++ D + ++DLP PA+VKPVELWTGKQ+FSVLLRP    
Sbjct: 540  SFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSVLLRPDKDR 599

Query: 2141 RVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDY 2320
            +V++NLTVAEK Y+KS ETMCP+DGFV IRNSELISGQLGKATLGNG+KDG+YS+LLRDY
Sbjct: 600  KVFVNLTVAEKIYVKSGETMCPRDGFVCIRNSELISGQLGKATLGNGSKDGLYSILLRDY 659

Query: 2321 GPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRY 2500
            G HAAA CMNRLAKLSARWIGNHGFSIGINDVQPGD LN EKK  ID EYG C  YI  Y
Sbjct: 660  GAHAAADCMNRLAKLSARWIGNHGFSIGINDVQPGDILNTEKKTVIDDEYGQCIRYIESY 719

Query: 2501 TSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPIN 2680
             SG LEL PGC+ AETLE+KI+ TLN IR+ TA VCM NL+WRNSPLIMSQCGSKGSPIN
Sbjct: 720  KSGKLELLPGCNKAETLEAKITGTLNKIRDTTAEVCMTNLSWRNSPLIMSQCGSKGSPIN 779

Query: 2681 ICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHT 2860
            ICQM+ACVGQQSVGGRRAPNGF+DRTLPHFE+GAKDPDAKGFVQNSFYTGL  TEFFFHT
Sbjct: 780  ICQMVACVGQQSVGGRRAPNGFLDRTLPHFERGAKDPDAKGFVQNSFYTGLLPTEFFFHT 839

Query: 2861 MGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQ 3040
            MGGREGLVDTAVKTADTGYMSRRLIKALEDLS+ YD+TVRNAS CIVQF YG D +DPAQ
Sbjct: 840  MGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDSTVRNASGCIVQFTYGDDGLDPAQ 899

Query: 3041 MEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEGGHPE 3220
            MEEKTG PLNFERLFMKAKATCP+  Q  L  ++I  I+   IE               E
Sbjct: 900  MEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFIINRVIE---------------E 944

Query: 3221 SSTLPDAPSKEGCLQAFAGSLKDFIEKKC-PSSNLRLKLTKEEHSEEDRYHLENVASNIS 3397
            + +  D    E C + F  SL  F+ K+  P+  L  KL  E  S +D+ ++++V S+ S
Sbjct: 945  NHSRSDISEMEKCSETFEASLLRFLNKRVYPTGMLSEKLNSENISLQDKSYVQSVVSSTS 1004

Query: 3398 GITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVT 3577
            GIT+ QL VFL  C +RY  KK                EPGTQMTLKTFHFAGVASMNVT
Sbjct: 1005 GITQQQLEVFLNMCFARYHPKKIECGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVT 1064

Query: 3578 LGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVKGRIERTLLEQVA 3757
            LGVPR            TPVIT  L                + AR+VKGRIE+TLL ++A
Sbjct: 1065 LGVPRIREIIDAAKKIKTPVITTEL----------QRKDCGITARIVKGRIEKTLLGEIA 1114

Query: 3758 KSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQAQHINILDDHKL 3937
            KS+K S+ +R+ASI++ LD   I+ AQL I A +VKESIL TPKMKL+ Q I +L+  KL
Sbjct: 1115 KSMKVSEMTRTASIVIKLDTKVIEAAQLFIDAYTVKESILLTPKMKLKEQQIRVLNRQKL 1174

Query: 3938 EVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKEDPGQIKKLK 4117
             V L    +RSK  FE       L+++L  VVVKGI  +ER II++EA  +DP Q KKLK
Sbjct: 1175 TVSLEA--ERSKLEFES----WALQNKLKDVVVKGIKQVERAIIVDEANGKDPNQRKKLK 1228

Query: 4118 LLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTIDI 4297
            L+VEGTG L+V+G +GVD  NT SNHI+EV Q LGIE+AR++IIDEIQYTMS HGMTIDI
Sbjct: 1229 LVVEGTGFLSVLGIQGVDARNTKSNHIMEVFQVLGIESARRQIIDEIQYTMSGHGMTIDI 1288

Query: 4298 RHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGVS 4477
            RHMMLLADLMTFKGEVLGITRYGV++MRDSVLMLASFE+TADHLFNA VNGRVD+IEGVS
Sbjct: 1289 RHMMLLADLMTFKGEVLGITRYGVRKMRDSVLMLASFERTADHLFNAPVNGRVDRIEGVS 1348

Query: 4478 ECIIMGIPMQLGTGMLKVRQ 4537
            ECI++GIPM+ GTGM+K++Q
Sbjct: 1349 ECIMLGIPMRTGTGMMKIKQ 1368


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score = 1843 bits (4773), Expect = 0.0
 Identities = 955/1428 (66%), Positives = 1113/1428 (77%), Gaps = 9/1428 (0%)
 Frame = +2

Query: 326  MRRDQGSMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 505
            M+R Q S+Q TKQPYIEDVGPRKI+SI+FS  S ++I K +EV+VY G YY+  +KP+  
Sbjct: 1    MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60

Query: 506  GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 685
            GLLDP MGPPNK+G CETC  NF  CPGH G+L LALPV+NVGY+GT+V I+KCICK CS
Sbjct: 61   GLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120

Query: 686  RILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKV 865
             ILL +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG QK   CS+CGY+NG V
Sbjct: 121  SILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGG-QKTATCSKCGYMNGMV 179

Query: 866  KRQQLKIIHERKDIADNGLDEFRSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCE 1036
            K+ QLKI HE+    +  LDE   A+S     +A+VS+P  +D K+VY L KNM DEDCE
Sbjct: 180  KKLQLKITHEQ---GNRILDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCE 236

Query: 1037 LLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE 1216
            LLYL+DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L  EM++
Sbjct: 237  LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSD 296

Query: 1217 TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGK 1396
            +   + L+ W  L+ EVAQYINS+ RG+  + Q+  RPLSGF QRLKGKQGRFRGNLSGK
Sbjct: 297  SSPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQ-RPLSGFTQRLKGKQGRFRGNLSGK 355

Query: 1397 RVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAK 1576
            RVE+TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAK
Sbjct: 356  RVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 415

Query: 1577 FIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARI 1756
            FI+ PDG EISL++ +RK HAD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARI
Sbjct: 416  FIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 475

Query: 1757 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1936
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVA
Sbjct: 476  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 535

Query: 1937 STQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSV 2116
            STQDFLTSSFLITRKDTFY+R++FSL+CSY+GDAMD  DLP+PA +KPVELWTGKQLF +
Sbjct: 536  STQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHM 595

Query: 2117 LLRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGI 2296
            LLRP++KMRVY+NLTV EKSY    ETMCP DGFVY RNSELISGQLGKATLGNGNKDG+
Sbjct: 596  LLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL 655

Query: 2297 YSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGH 2476
            YSVLLRDY  HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+  I   Y  
Sbjct: 656  YSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKK 715

Query: 2477 CTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQC 2656
            C D I ++  G L + PGCD+A+TLE++++ +LN +R+    +CMK L+WRNSPLIMSQC
Sbjct: 716  CEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQC 775

Query: 2657 GSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLS 2836
            GSKGSPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF   +K P AKGFV +SF+ GLS
Sbjct: 776  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835

Query: 2837 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYG 3016
            ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG
Sbjct: 836  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895

Query: 3017 GDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSV 3196
             D MDP+QMEEK G PLNF RLFMK KATCP   +K L+  EI EIV E    +L    +
Sbjct: 896  DDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNE----RLSYHDM 951

Query: 3197 TFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDR 3364
            T EG               GC +AF  SL DF+ K    +  NLR  L L +E++  +DR
Sbjct: 952  TPEG---------------GCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDR 996

Query: 3365 YHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKTF 3544
             +LE +A NISGITK QL VFL TCISRY  K+                EPGTQMTLKTF
Sbjct: 997  GYLEKIALNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTF 1056

Query: 3545 HFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVKG 3724
            HFAGVASMNVTLGVPR            TP+IT  L                 AAR++K 
Sbjct: 1057 HFAGVASMNVTLGVPRIKEIINAAKKITTPIITTKL----------LSAANLTAARMIKA 1106

Query: 3725 RIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQA 3904
            RIE+TLL QVAKS+K    SR ASI ++LD + I  +QL I A +VK+SIL+T K+KL+ 
Sbjct: 1107 RIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKE 1166

Query: 3905 QHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAK 4084
              I +L+  KLEVF  P   + K  FE    LH LK++L  VVVKGI T++R ++  E +
Sbjct: 1167 HQIKVLNPRKLEVF--PQANKDKLHFE----LHRLKNKLPAVVVKGITTVQRAVVNKEQQ 1220

Query: 4085 KEDPGQIK--KLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEI 4258
            K+    +K    +LLVEGTGLLAVMG EGVDG  T SNHI+EVQ  LGIEAAR  IIDEI
Sbjct: 1221 KDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEI 1280

Query: 4259 QYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNA 4438
             YTMSSHGMTID+RHMMLLADLMT+KGEVLGITR+GVQ+M+DSVLMLASFEKT DHLFNA
Sbjct: 1281 NYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNA 1340

Query: 4439 AVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPVKLTYGPDPII 4582
            +VNGR DKIEGV+ECIIMGIPM +GTGM K+RQ V  V+L Y PDPII
Sbjct: 1341 SVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEQVELNYQPDPII 1388


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score = 1836 bits (4755), Expect = 0.0
 Identities = 952/1428 (66%), Positives = 1111/1428 (77%), Gaps = 9/1428 (0%)
 Frame = +2

Query: 326  MRRDQGSMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 505
            M R Q S+Q TKQPYIEDVGPRKI+SI+FS  S ++I KL+EV+VY G YY+  +KP+  
Sbjct: 1    MNRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQN 60

Query: 506  GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 685
            GLLDP MGPPNKSG CETC  NF  CPGH G+L LALPV+NVGY+GT+V I+KCICK CS
Sbjct: 61   GLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCS 120

Query: 686  RILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKV 865
             ILL +K+R+D L++MRNP+ E LKK+++ K +V +CN+M GG QK   CS+CGY+NG V
Sbjct: 121  SILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGG-QKTATCSKCGYMNGMV 179

Query: 866  KRQQLKIIHERKDIADNGLDEFRSALS---HTQANVSLPSTIDAKMVYELLKNMRDEDCE 1036
            K+ QLKI HE+    +  LDE   A+S     +A+VS+P  ID K+VY L KNM DEDCE
Sbjct: 180  KKLQLKITHEQ---GNRILDEINVAISDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCE 236

Query: 1037 LLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE 1216
            LLYL+DRPEKL+VTSI VPP AIRPSVFVDGG QSNENDITERLK IIQANA L  EM++
Sbjct: 237  LLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSD 296

Query: 1217 TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGK 1396
            +   + L+ W  L+ EVAQYINS+ RG+    Q   RPLSGF QRLKGKQGRFRGNLSGK
Sbjct: 297  SSPVKSLNQWIDLQMEVAQYINSDVRGVPLQMQP-PRPLSGFTQRLKGKQGRFRGNLSGK 355

Query: 1397 RVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAK 1576
            RVE+TGRTVISPDPNLKITEVA+PILMA+ILTYPERVS HNIEKLRQ VRNGP KYPGAK
Sbjct: 356  RVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAK 415

Query: 1577 FIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARI 1756
            FI+ PDG+E+SL++ +RK +AD+L++G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARI
Sbjct: 416  FIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 475

Query: 1757 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1936
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVA
Sbjct: 476  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVA 535

Query: 1937 STQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSV 2116
            STQDFLTSSFLITRKDTFY+R++FSL+CSY+GDAMD  DLP+PA +KPVELWTGKQLF V
Sbjct: 536  STQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHV 595

Query: 2117 LLRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGI 2296
            LLRP++KMRVY+NLT+ EKSY    ETMC  DGFVY RNSELISGQLGKATLGNGNKDG+
Sbjct: 596  LLRPYSKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKDGL 655

Query: 2297 YSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGH 2476
            YSVLLRDY  HAAATCMNRLAKLSARWIGNHGFSIGI+DV PG+ L K+K+  I   Y  
Sbjct: 656  YSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKK 715

Query: 2477 CTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQC 2656
            C D I ++  G L + PGCD+A+TLE++++ +LN +R+    +CMK L+WRNSPLIMSQC
Sbjct: 716  CEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQC 775

Query: 2657 GSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLS 2836
            GSKGSPINI QMIACVGQQSVGGRRAP+GFIDR+LPHF   +K P AKGFV +SF+ GLS
Sbjct: 776  GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLS 835

Query: 2837 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYG 3016
            ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD+TVRNASACIVQF+YG
Sbjct: 836  ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYG 895

Query: 3017 GDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSV 3196
             D MDP++MEEK G PLNF RLFMK KATCP   +K L+  EI EIV E    +L    +
Sbjct: 896  DDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNE----RLSYHDM 951

Query: 3197 TFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSS--NLR--LKLTKEEHSEEDR 3364
            T EG               GC +AF  SL DF+ K    +  NLR  L L +E++  +DR
Sbjct: 952  TPEG---------------GCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDR 996

Query: 3365 YHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKTF 3544
             +LE +  NISGITK QL VFL TCISRY  K+                EPGTQMTLKTF
Sbjct: 997  GYLEKIVLNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTF 1056

Query: 3545 HFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVKG 3724
            HFAGVASMNVTLGVPR            TP+ITA L                 AAR++K 
Sbjct: 1057 HFAGVASMNVTLGVPRIKEIINAAKKITTPIITAKL----------LSAGNLTAARMIKA 1106

Query: 3725 RIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQA 3904
            RIE+TLL QVAKS+K    SR ASI ++LD + I  +QL I A +VK+SIL+T K+KL+ 
Sbjct: 1107 RIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKE 1166

Query: 3905 QHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAK 4084
              I +L+  KLEVF  P   + K  FE    LH LK++L  VVVKGI T++R ++  E +
Sbjct: 1167 HQIKVLNPRKLEVF--PQANKDKLHFE----LHRLKNKLPAVVVKGITTVQRAVVNKEQQ 1220

Query: 4085 KEDPGQIK--KLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEI 4258
            K+    +K    +LLVEGTGLLAVMG EGVDG  T SNHI+EVQ  LGIEAAR  IIDEI
Sbjct: 1221 KDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEI 1280

Query: 4259 QYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNA 4438
             YTMSSHGMTID+RHMMLLADLMT+KGEVLGITR+GVQ+M+DSVLMLASFEKT DHLFNA
Sbjct: 1281 NYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNA 1340

Query: 4439 AVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPVKLTYGPDPII 4582
            +VNGR DKIEGV+ECIIMGIPM +GTGM K+RQ V  V+L Y PDP++
Sbjct: 1341 SVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEHVELNYQPDPMM 1388


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score = 1804 bits (4672), Expect = 0.0
 Identities = 951/1424 (66%), Positives = 1096/1424 (76%), Gaps = 12/1424 (0%)
 Frame = +2

Query: 347  MQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHM 526
            +QFTK+PYIEDVGPRKIESI+F+  S ++I K +EVQV++G YYD  RKP+  GLLDP M
Sbjct: 5    IQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRM 64

Query: 527  GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEK 706
            GP NK+G C TC  NF +CPGHCG+LTLALPV+NVGY+ TIV I+KCICK CSR+LL EK
Sbjct: 65   GPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEK 124

Query: 707  DRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVKR--QQL 880
              +D+L++MR+ K+E LKK +++K IV KC +M   ++KAV+CSRCGY+NG VK+    L
Sbjct: 125  ASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMAS-SKKAVKCSRCGYMNGIVKKAVSVL 183

Query: 881  KIIHERKDIADNGLDEFRSALSHTQ---ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 1051
             IIH+R  IAD  L+E  SA+SHT+   A+ S+   ++   V  L K M DEDC+LL L 
Sbjct: 184  GIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243

Query: 1052 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETES-Q 1228
            +RPEKL++T+I VPP AIRPSVF+DGG QSNEND+TERLK IIQANA L  E+ +T S  
Sbjct: 244  ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303

Query: 1229 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 1408
            + L+ W+ L+ EVAQYINS+ RG+    Q+ +RPLSGF+QRLKGKQGRFRGNLSGKRVE+
Sbjct: 304  KCLAGWDYLQIEVAQYINSDVRGVPLAMQA-ARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362

Query: 1409 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 1588
            TGRTVISPDPNLKITEVA+PILMA+IL+YPERVSHHNIEKLRQ + NGP KYPGAK I+ 
Sbjct: 363  TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422

Query: 1589 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 1768
            PDG   SL++  RK  AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 423  PDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 482

Query: 1769 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1948
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 483  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 542

Query: 1949 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 2128
            FLTSSFLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPA++KPVELWTGKQLF+VLLRP
Sbjct: 543  FLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRP 602

Query: 2129 HAKMRVYLNLTVAEKSYMK--SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYS 2302
            HA +RVYLNLTV EK+Y K   KETMCP DGFVY RNSELISGQLGKATLGNGNKDG++S
Sbjct: 603  HANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFS 662

Query: 2303 VLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCT 2482
            VLLRDY  HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG  LN +K   I+  Y +C 
Sbjct: 663  VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCH 722

Query: 2483 DYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGS 2662
            + I++Y  G L+L PGC++A+TLE++I+  LN IRE TANVCM+ L+WRNSPLIMSQCGS
Sbjct: 723  ELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGS 782

Query: 2663 KGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSAT 2842
            KGSPINI QMIACVGQQSVGGRRAP+GFIDRTLPHF + +K PDAKGFV +SFYTGL+AT
Sbjct: 783  KGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTAT 842

Query: 2843 EFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGD 3022
            EFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD TVRNA+  IVQF+YG D
Sbjct: 843  EFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGDD 902

Query: 3023 AMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTF 3202
             MDPA+ME K G PLNF RLF+K KATCPA +   L+  +I+E V    E          
Sbjct: 903  GMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETVKRLKEHN-------- 954

Query: 3203 EGGHPESSTLPDAPSKEGCLQAFAGSLKDFIE---KKCPSSNLRLKLTKEEHSEEDRYHL 3373
                          S EGC  AF  +L  F+E   +K  ++   L L  E   EE+    
Sbjct: 955  -------------TSAEGCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQ 1001

Query: 3374 ENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFA 3553
            E  A NISGIT  QL VFL TCISRYQ K+                EPGTQMTLKTFHFA
Sbjct: 1002 EKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFA 1061

Query: 3554 GVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVKGRIE 3733
            GVASMNVTLGVPR            TP+ITA L                  AR+VKGRIE
Sbjct: 1062 GVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVK----------TARMVKGRIE 1111

Query: 3734 RTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQAQHI 3913
            RT L QVAKSIK   TSR A I V LD + I  +QLSI ++ V+ESILR  ++KL+ QHI
Sbjct: 1112 RTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHI 1171

Query: 3914 NILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKED 4093
             +LD  KLEV  +P   RS   FE    LH LK+ L  VVVKGI T+ER +I  + K   
Sbjct: 1172 KVLDAGKLEV--HPQGDRSTIHFE----LHALKNLLPTVVVKGIETVERAVINKDNK--- 1222

Query: 4094 PGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMS 4273
                 K  LLVEGTGL  VMGTEGV G  TTSNHI+EVQQ LGIEAARK II+EIQYTM+
Sbjct: 1223 ----VKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMA 1278

Query: 4274 SHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGR 4453
            SHGM+IDIRHMMLLADLMTF+GEVLGITR+G+Q+M  SVLMLASFEKTADHLFNA+V+GR
Sbjct: 1279 SHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGR 1338

Query: 4454 VDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPV-KLTYGPDPII 4582
             DKIEGVSECIIMGIPMQLGTG+LKVRQ +  V +L+YG DPII
Sbjct: 1339 DDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGLDPII 1382


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score = 1778 bits (4606), Expect = 0.0
 Identities = 931/1434 (64%), Positives = 1092/1434 (76%), Gaps = 23/1434 (1%)
 Frame = +2

Query: 350  QFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMG 529
            +FTK+PYIEDVGPRKI+SIQFS LS ++I K +EVQVYQ  YYD + +P+ GGLLDP MG
Sbjct: 4    KFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPRMG 63

Query: 530  PPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKD 709
            P NKSGKC TC  NF +CPGH G+L+LALPV+NVGY+ TI+ I+KCICK CSRI+L EK 
Sbjct: 64   PANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKL 123

Query: 710  RQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVKRQ--QLK 883
             +D+L+RMR+PK++ LKK DI+K+IV KC++M   + KAV+C RCGYVNG VK+    L 
Sbjct: 124  CKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMA--SSKAVKCWRCGYVNGTVKKAVAMLG 181

Query: 884  IIHERKDIADNGLDEFRSALSHTQANVS----LPSTIDAKMVYELLKNMRDEDCELLYLN 1051
            IIH+R  I DN L+EFRSA+SHT+ + +        ++   V  L K M D DCELLYL+
Sbjct: 182  IIHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLS 241

Query: 1052 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ- 1228
            DRPEKL++T+I VPP  IRPSV +DG  QSNENDITERLK IIQANA LR E+ ET +  
Sbjct: 242  DRPEKLIITNIAVPPIPIRPSVIMDGS-QSNENDITERLKRIIQANASLRQELVETNAAF 300

Query: 1229 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 1408
            + L  WE+L+ EVAQYINS+ RG+  + Q  S+PLSGF+QR+KGK GRFRGNLSGKRVE+
Sbjct: 301  KCLGGWEMLQVEVAQYINSDVRGVPFSMQV-SKPLSGFVQRIKGKHGRFRGNLSGKRVEY 359

Query: 1409 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 1588
            TGRTVISPDPNLKITEVA+PI MARILTYPERVS+HNIEKLRQ VRNGP KYPGA+ ++ 
Sbjct: 360  TGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMVRY 419

Query: 1589 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 1768
            PDG    L+ + RK  AD+L++GC+V RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 420  PDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWR 479

Query: 1769 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1948
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD
Sbjct: 480  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 539

Query: 1949 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 2128
            FLTSSFLITRKD FYDR+AFSL+CSY+GD MD IDLPTPAL+KP+ELWTGKQLFSVLLRP
Sbjct: 540  FLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLLRP 599

Query: 2129 HAKMRVYLNLTVAEKSYMK-----------SKETMCPKDGFVYIRNSELISGQLGKATLG 2275
            HA +RVYLNL V E++Y K             ETMCP DGFVYIRNSELI GQLGKATLG
Sbjct: 600  HASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKATLG 659

Query: 2276 NGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVT 2455
            NGNKDG+YSVLLRDY  HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG  LN EK +T
Sbjct: 660  NGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKALT 719

Query: 2456 IDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNS 2635
            I  +Y  C + I+ +  G L+  PG D+A+TLE+ ++  LNNIR+ T  VCMK L+WRNS
Sbjct: 720  ISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWRNS 779

Query: 2636 PLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQN 2815
            PLIMSQCGSKGS INI QMIACVGQQSVGGRRAPNGFIDR+LPHF +G+K P AKGFV N
Sbjct: 780  PLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFVAN 839

Query: 2816 SFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASAC 2995
            SFY+GL+ATEFFFHTM GREGLVDTAVKTA+TGYMSRRLIKALEDLSI YDNTVRNAS C
Sbjct: 840  SFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNASGC 899

Query: 2996 IVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIES 3175
            IVQF+YG D MDPA ME K+G PLNF+RL MK KATCP ++QK L    I +++ E +  
Sbjct: 900  IVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSIMQMLEEQLAK 959

Query: 3176 KLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSE 3355
                        H  +           C +AF  SLK F++ +    +  +KL    +  
Sbjct: 960  ------------HDPAGV---------CSEAFKKSLKGFLKSQTNELDRVMKLV--NNCA 996

Query: 3356 EDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTL 3535
            +    LE V   ISGI+  QL VF+ TCISRY+SK                 EPGTQMTL
Sbjct: 997  QKSEILEKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTL 1056

Query: 3536 KTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARL 3715
            KTFHFAGVASMN+T GVPR            TPVITA L                  A++
Sbjct: 1057 KTFHFAGVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPN----------IAQI 1106

Query: 3716 VKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMK 3895
            VKGRIE+T+L QVAKSIK   TSRSAS+++TLD + I  A+L I A+ VKESIL+TPK+K
Sbjct: 1107 VKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTPKIK 1166

Query: 3896 LQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIIN 4075
            L+ QH+ +LD  KLEV   PP  RS+  FE    LH LK+ L  VVVKGI T+ER ++ +
Sbjct: 1167 LKEQHVKVLDGRKLEVV--PPADRSQIHFE----LHSLKNLLPLVVVKGIKTVERTVVYD 1220

Query: 4076 EAK----KEDPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKK 4243
            + K    +++    K  +LLVEGTGL AVMG EG+DG  T SNH++E++Q LGIEAARK 
Sbjct: 1221 KNKEKKNQKEEETTKHFQLLVEGTGLQAVMGIEGIDGRRTWSNHVMEMEQILGIEAARKC 1280

Query: 4244 IIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTAD 4423
            IIDEI  TM  HGMTID RHMMLLAD+MTF+GEVLGITR+G+Q+M  S+LMLASFE+TAD
Sbjct: 1281 IIDEIAQTMEHHGMTIDRRHMMLLADVMTFRGEVLGITRFGIQKMDKSILMLASFERTAD 1340

Query: 4424 HLFNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSV-PPVKLTYGPDPII 4582
            HLFNAAVNGR DKIEGV+ECIIMGIPMQ+GTG+LKV Q V PP  L YGPDP++
Sbjct: 1341 HLFNAAVNGRDDKIEGVTECIIMGIPMQIGTGILKVIQRVDPPPMLRYGPDPVL 1394


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score = 1770 bits (4584), Expect = 0.0
 Identities = 934/1432 (65%), Positives = 1082/1432 (75%), Gaps = 22/1432 (1%)
 Frame = +2

Query: 353  FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 532
            FTKQPYIEDVGPRKI+S+QF+T SG +I KL+EVQVY+G YYD  RKP+ GGLLDP MGP
Sbjct: 11   FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70

Query: 533  PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 712
             NK  KC TC ANF +CPGH G++ LALPVFNVGY  TI+ I+KCICK CSRILL+EK  
Sbjct: 71   ANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKLF 130

Query: 713  QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVKR--QQLKI 886
            +DFLR+MRNPKLE L+K D++K I+ KC+++  GN K+  CSRCGY+NG VK+    L I
Sbjct: 131  KDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGN-KSTRCSRCGYLNGSVKKAVSMLGI 189

Query: 887  IHERKDIADNGLDEFRSALSHTQANVSLPSTIDAKMVYELLKNMRDEDCELLYLNDRPEK 1066
            +H R    D G+        +  +N      ++   V  L + M DEDCELL+L++RPEK
Sbjct: 190  LHYRARSKDAGVVSEDLRAPYNVSN----DILNPFRVLCLFQRMSDEDCELLFLSNRPEK 245

Query: 1067 LMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-RFLSN 1243
            L++T++LVPP AIRPSV +DG  QSNENDITERLK IIQ NA +  E++ + SQ + L +
Sbjct: 246  LIITNVLVPPIAIRPSVIMDGS-QSNENDITERLKRIIQQNASVSQELSTSNSQAKCLES 304

Query: 1244 WELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRTV 1423
            W++L+ EVAQ INS+ RG+  + Q  S+PL+GF+QRLKGKQGRFRGNL GKRVEFTGRTV
Sbjct: 305  WDMLQSEVAQLINSDVRGIPFSMQV-SKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRTV 363

Query: 1424 ISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGHE 1603
            ISPDPNLKITEVAVPI MARILTYPERV+ HNIEKLRQ V NGP KYPGA+ ++  DG  
Sbjct: 364  ISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLDGSM 423

Query: 1604 ISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFN 1783
             SL+   RK  AD+L+YG IV RHLEDGDVVLFNRQPSLHRMSIM HR R+MPWRTLRFN
Sbjct: 424  RSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFN 483

Query: 1784 ESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSS 1963
            ESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQDFLTSS
Sbjct: 484  ESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSS 543

Query: 1964 FLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKMR 2143
            FLITRKDTFYDR+AFSLMCSY+GD MD +DLPTPALVKP+ELWTGKQLFSVL+RPHA M+
Sbjct: 544  FLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMK 603

Query: 2144 VYLNLTVAEKSYMKSK------ETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSV 2305
            VYLNLTV EKSY K K      ETMCP DGFVY RNSELISGQ+GKATLGNGNKDG+YSV
Sbjct: 604  VYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSV 663

Query: 2306 LLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTD 2485
            LLRDY  HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPGD L K+K+ TI   Y  C  
Sbjct: 664  LLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDK 723

Query: 2486 YIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSK 2665
             I  + +G+L    GCD+A++LESKI++ LN IREATANVCM+NL+WRNSPLIMSQCGSK
Sbjct: 724  QINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLIMSQCGSK 783

Query: 2666 GSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATE 2845
            GSPINI QM+ACVGQQSVGGRRAP+GFIDR+LPHF + AK P AKGFV NSFY+GL+ATE
Sbjct: 784  GSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFYSGLTATE 843

Query: 2846 FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDA 3025
            FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI YD++VRNA  CIVQF YG D 
Sbjct: 844  FFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQFCYGDDG 903

Query: 3026 MDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFE 3205
            MDPAQME K+G PLNFERLF+KAKATCP+   K L+  E     +ET+E +L K      
Sbjct: 904  MDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEF----SETVEDRLSKD----- 954

Query: 3206 GGHPESSTLPDAPSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKEE---------HS 3352
                      DA  + GC  AF GSLK F+ K  +    +    L   E          S
Sbjct: 955  ----------DASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSS 1004

Query: 3353 EEDRYHLEN-VASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQM 3529
            + D   + N V  NI+G+T  QL VFL TC+SRY +KK                EPGTQM
Sbjct: 1005 DNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQM 1064

Query: 3530 TLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAA 3709
            TLKTFHFAGVASMNVTLGVPR            TP++TA L                  A
Sbjct: 1065 TLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVN----------IA 1114

Query: 3710 RLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPK 3889
            R+VK RIE+T L Q+AK I+   +SRSA I + LD ++I  A+L + A+ VK++IL TPK
Sbjct: 1115 RMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPK 1174

Query: 3890 MKLQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVII 4069
            +KL+ +HIN+LDD KL V     D+      +  F LH LK+ L  VVVKGI T+ R +I
Sbjct: 1175 LKLKHEHINVLDDRKLRVLPQDADRN-----KLHFNLHFLKNMLPGVVVKGIKTVGRAVI 1229

Query: 4070 INEAKKEDPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKII 4249
              E  K+     KK  LLVEGTGL AVMGTEGVDGCNT SNHI+EVQQ LGIEAARK II
Sbjct: 1230 KEE--KDKARNAKKFSLLVEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCII 1287

Query: 4250 DEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHL 4429
            +EI+YTM SHGM+IDIRHMMLL DLMTF+GEVLGITR+G+Q+M  SVLMLASFEKTADHL
Sbjct: 1288 EEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHL 1347

Query: 4430 FNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVP-PVKLTYGPDPII 4582
            FNA+VNGR DKIEGVSEC+IMGIPM LGTGMLKVRQ V  P +L YGP  I+
Sbjct: 1348 FNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRVSVPQQLPYGPPAIL 1399


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score = 1763 bits (4566), Expect = 0.0
 Identities = 926/1445 (64%), Positives = 1089/1445 (75%), Gaps = 25/1445 (1%)
 Frame = +2

Query: 323  EMRRDQGSMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVG 502
            ++++   S+ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY   R P+ 
Sbjct: 4    QLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIE 63

Query: 503  GGLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKC 682
            GGLLDP MGP NKS  C TC   F+NCPGH G+LTLALPV+NVGY+ TI+ I+KCICK C
Sbjct: 64   GGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCICKYC 123

Query: 683  SRILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGK 862
            SR+LL+EK  +D+L++MRNPK+E L+K D++K+IV KC++M     KAV+C RCGY+NG 
Sbjct: 124  SRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS---KAVKCPRCGYINGM 180

Query: 863  VKRQQ--LKIIHERKDIADNGLDEFRSALSHTQANVSLPST----IDAKMVYELLKNMRD 1024
            VK+    L IIH+R  + ++ L EF SA++HT+ + +  +     ++   V  L K M D
Sbjct: 181  VKKAVAVLGIIHDRSKVTES-LQEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTD 239

Query: 1025 EDCELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRS 1204
             DCE+LYL++RPEKL++T+I VPP AIRPSV +DG  QSNENDITERLK IIQ NA L+ 
Sbjct: 240  TDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGS-QSNENDITERLKRIIQTNASLQQ 298

Query: 1205 EMAETESQ-RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRG 1381
            E+ E  S  + L+ WE L+ EVAQYINS+ RG+  + Q  +RPLSGF+QRLKGKQGRFRG
Sbjct: 299  ELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV-ARPLSGFVQRLKGKQGRFRG 357

Query: 1382 NLSGKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQK 1561
            NLSGKRVE+TGRTVISPDPNLKITEVA+PI MARILTYPERVS HNIEKLRQ ++NGP K
Sbjct: 358  NLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDK 417

Query: 1562 YPGAKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMS 1741
            YPGA+ I+ PDG    L  + R   A +L+ GCIV RHLEDGDVVLFNRQPSLHRMSIM 
Sbjct: 418  YPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMC 477

Query: 1742 HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNG 1921
            HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNG
Sbjct: 478  HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNG 537

Query: 1922 EILVASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGK 2101
            EILVASTQDFLTSSFLITRKDTFYDR+AFSLMC Y+GD MD +DLPTPA++KPVELWTGK
Sbjct: 538  EILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGK 597

Query: 2102 QLFSVLLRPHAKMRVYLNLTVAEKSYMKSK-----------ETMCPKDGFVYIRNSELIS 2248
            QLFSVL+RPHA MRVY+NLTV EK+Y               ETMCP DGFVY RNSELIS
Sbjct: 598  QLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELIS 657

Query: 2249 GQLGKATLGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGD 2428
            GQLGKATLGNGNKDG+YSVLLRDYG HA + CMNRLAKLSARWIGNHGFSIGI+DVQP  
Sbjct: 658  GQLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKK 717

Query: 2429 TLNKEKKVTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVC 2608
             L+ +K   I   Y  C   I+ Y  G L+L PGCD+A+TLE+ I++ LN IRE     C
Sbjct: 718  ELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKAC 777

Query: 2609 MKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKD 2788
            M +L WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGFIDR+LPHF + AK+
Sbjct: 778  MGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKE 837

Query: 2789 PDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYD 2968
            P AKGFV NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI YD
Sbjct: 838  PAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYD 897

Query: 2969 NTVRNASACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIK 3148
            N+VRNA  CIVQF+YG D MDPA ME K+G PLNF+RL MK KATCP   Q++L+  ++ 
Sbjct: 898  NSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQVS 957

Query: 3149 EIVTETIESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRL 3328
            EIV + +                       A  KE C +AF  SL+ F E +    + ++
Sbjct: 958  EIVEKQLA----------------------AYGKESCSEAFLNSLRKFFEGQQDKLDKKI 995

Query: 3329 KLTKEEHSEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXX 3508
            K  ++   ++    LE V    SGIT+ QL VF++TC SRY  K+               
Sbjct: 996  KFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSI 1055

Query: 3509 XEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXX 3688
             EPGTQMTLKTFHFAGVASMN+T GVPR            TP+ITA L            
Sbjct: 1056 GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNEN----- 1110

Query: 3689 XXXXVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKE 3868
                 AAR+VKGRIE+TLL QVAKSIK   TSR ASI++ LD + I  A L I A  VKE
Sbjct: 1111 -----AARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKE 1165

Query: 3869 SILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGIN 4048
            SI++TPK+KL+ QHI +LD  KLE+F  PP  +SK  FE    L+ LK+ L  V+VKGI 
Sbjct: 1166 SIVQTPKIKLKQQHIKVLDFRKLEIF--PPVDKSKIHFE----LYSLKNVLPMVIVKGIK 1219

Query: 4049 TIERVIIINEAKK----EDPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQC 4216
            T+ERV+I  + K+    ++ G+ KK +LLVEGTGL AVMG EG+DGC T SNHI EVQQ 
Sbjct: 1220 TVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQT 1279

Query: 4217 LGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLM 4396
            LGIEAAR  IIDEI  TM +HGM+ID RHMMLLADLMTF+GEVLGITR+G+Q+M  SVLM
Sbjct: 1280 LGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLM 1339

Query: 4397 LASFEKTADHLFNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQ--SVPPVKLTYG- 4567
            LASFEKTADHLFNA+VNGR D+IEGVSECIIMGIPM LGTG+LK+RQ  +VPP+ L YG 
Sbjct: 1340 LASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPM-LKYGA 1398

Query: 4568 PDPII 4582
            PDPI+
Sbjct: 1399 PDPIM 1403


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score = 1704 bits (4413), Expect = 0.0
 Identities = 909/1460 (62%), Positives = 1070/1460 (73%), Gaps = 40/1460 (2%)
 Frame = +2

Query: 323  EMRRDQGSMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVG 502
            ++++   S+ FTKQPYIEDVGPRKIESIQFS +S ++I K +EVQVY+G+YY   R P+ 
Sbjct: 4    QLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVPIE 63

Query: 503  GGLLDPHM---------------GPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGY 637
            GGLLDP M               GP NKS  C TC   F+NCPGH G+LTLALPV+NVGY
Sbjct: 64   GGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGY 123

Query: 638  IGTIVVIMKCICKKCSRILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGN 817
            + TI+ I+KCICK CSR+LL+EK  +D+L++MRNPK+E L+K D++K+IV KC++M    
Sbjct: 124  LSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS-- 181

Query: 818  QKAVECSRCGYVNGKVKRQQ--LKIIHERKDIADNGLDEFRSALSHTQANVSLPST---- 979
             KAV+C RCGY+NG VK+    L IIH+R  + ++ L EF SA++HT+ + +  +     
Sbjct: 182  -KAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTES-LQEFASAITHTKESKAAVNVATYI 239

Query: 980  IDAKMVYELLKNMRDEDCELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDIT 1159
            ++   V  L K M D DCE+LYL++RPEKL++T+I VPP AIRPSV +DG  QSNENDIT
Sbjct: 240  LNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGS-QSNENDIT 298

Query: 1160 ERLKFIIQANACLRSEMAETESQ-RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLS 1336
            ERLK IIQ NA L+ E+ E  S  + L+ WE L+ EVAQYINS+ RG+  + Q  +RPLS
Sbjct: 299  ERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQV-ARPLS 357

Query: 1337 GFIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHH 1516
            GF+QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVA+PI MARILTYPERVS H
Sbjct: 358  GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDH 417

Query: 1517 NIEKLRQYVRNGPQKYPGAKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVV 1696
            NIEKLRQ ++NGP KYPGA+ I+ PDG    L  + R   A +L+ GCIV RHLEDGDVV
Sbjct: 418  NIEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVV 477

Query: 1697 LFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 1876
            LFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL
Sbjct: 478  LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 537

Query: 1877 MLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDL 2056
            +LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR+AFSLMC Y+GD MD +DL
Sbjct: 538  LLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDL 597

Query: 2057 PTPALVKPVELWTGKQLFSVLLRPHAKMRVYLNLTVAEKSYMKSK-----------ETMC 2203
            PTPA++KPVELWTGKQLFSVL+RPHA MRVY+NLTV EK+Y               ETMC
Sbjct: 598  PTPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMC 657

Query: 2204 PKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIG 2383
            P DGFVY RNSELISGQLGKATLG                      CMNRLAKLSARWIG
Sbjct: 658  PNDGFVYFRNSELISGQLGKATLG----------------------CMNRLAKLSARWIG 695

Query: 2384 NHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKI 2563
            NHGFSIGI+DVQP   L+ +K   I   Y  C   I+ Y  G L+L PGCD+A+TLE+ I
Sbjct: 696  NHGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVI 755

Query: 2564 SETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNG 2743
            ++ LN IRE     CM +L WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNG
Sbjct: 756  TDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNG 815

Query: 2744 FIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMS 2923
            FIDR+LPHF + AK+P AKGFV NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMS
Sbjct: 816  FIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMS 875

Query: 2924 RRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKAT 3103
            RRLIKALEDLSI YDN+VRNA  CIVQF+YG D MDPA ME K+G PLNF+RL MK KAT
Sbjct: 876  RRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKAT 935

Query: 3104 CPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSL 3283
            CP   Q++L+  ++ EIV + +                       A  KE C +AF  SL
Sbjct: 936  CPPAGQRYLSPQQVSEIVEKQLA----------------------AYGKESCSEAFLNSL 973

Query: 3284 KDFIEKKCPSSNLRLKLTKEEHSEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKK 3463
            + F E +    + ++K  ++   ++    LE V    SGIT+ QL VF++TC SRY  K+
Sbjct: 974  RKFFEGQQDKLDKKIKFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKR 1033

Query: 3464 XXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVIT 3643
                            EPGTQMTLKTFHFAGVASMN+T GVPR            TP+IT
Sbjct: 1034 VEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIIT 1093

Query: 3644 AVLXXXXXXXXXXXXXXXXVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDR 3823
            A L                 AAR+VKGRIE+TLL QVAKSIK   TSR ASI++ LD + 
Sbjct: 1094 AELECNDNEN----------AARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMET 1143

Query: 3824 IDGAQLSIKASSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALH 4003
            I  A L I A  VKESI++TPK+KL+ QHI +LD  KLE+F  PP  +SK  FE    L+
Sbjct: 1144 IQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIF--PPVDKSKIHFE----LY 1197

Query: 4004 GLKSRLSKVVVKGINTIERVIIINEAKK----EDPGQIKKLKLLVEGTGLLAVMGTEGVD 4171
             LK+ L  V+VKGI T+ERV+I  + K+    ++ G+ KK +LLVEGTGL AVMG EG+D
Sbjct: 1198 SLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGID 1257

Query: 4172 GCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLG 4351
            GC T SNHI EVQQ LGIEAAR  IIDEI  TM +HGM+ID RHMMLLADLMTF+GEVLG
Sbjct: 1258 GCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLG 1317

Query: 4352 ITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKV 4531
            ITR+G+Q+M  SVLMLASFEKTADHLFNA+VNGR D+IEGVSECIIMGIPM LGTG+LK+
Sbjct: 1318 ITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKI 1377

Query: 4532 RQ--SVPPVKLTYG-PDPII 4582
            RQ  +VPP+ L YG PDPI+
Sbjct: 1378 RQRDAVPPM-LKYGAPDPIM 1396


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score = 1675 bits (4338), Expect = 0.0
 Identities = 887/1426 (62%), Positives = 1054/1426 (73%), Gaps = 31/1426 (2%)
 Frame = +2

Query: 353  FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 532
            +TKQPYIEDVGPR+I+SIQFST+SG+DI K SE QV+ G+YYD  +K + GGLLD  MG 
Sbjct: 10   YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTRMGA 69

Query: 533  PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 712
            PNK G C+TC  +FT+CPGH G+L L LPV+NVGY+ TI+ I+KCICK CSR+L+ EK R
Sbjct: 70   PNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEKLR 129

Query: 713  QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVKR--QQLKI 886
            + +L+RMRNP+ E LKKN+++K IV KC+SM   + KAV+C RCGY+NG VK+    + I
Sbjct: 130  KSYLKRMRNPRTEPLKKNELMKEIVKKCSSMA--SSKAVKCLRCGYMNGMVKKAGSVVGI 187

Query: 887  IHERKDIADNGLDEFRSALSHTQ---ANVSLPSTI-DAKMVYELLKNMRDEDCELLYLND 1054
            IH+R  + D  L+E +SA+ HT+   A + L + I +   V  L + M +EDCELLYL  
Sbjct: 188  IHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQG 247

Query: 1055 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ-- 1228
            RPEKL++T+I VPP +IRPSVF +G  QSNENDITERLK IIQ NA LR E+ E      
Sbjct: 248  RPEKLIITTIAVPPISIRPSVFTEGS-QSNENDITERLKQIIQFNAKLRLELLEGRRTGI 306

Query: 1229 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 1408
            ++L  W+ L+  V  YINS+ R          RPLSGF+QRL GKQGRFR NL+GKRVEF
Sbjct: 307  KYLIGWDELQAVVTLYINSDVR--IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEF 364

Query: 1409 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 1588
            TGRTVISPDPNLKITEVA+PI MARILTYPERV+HHNIEKLRQ V NG  KYPGA+ +  
Sbjct: 365  TGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTY 424

Query: 1589 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 1768
            PDG    L    RK  A++L+ GCIVHRHLEDGDVVLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 425  PDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWR 484

Query: 1769 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1948
            TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMGVQNNLCTPKNGEILVASTQD
Sbjct: 485  TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQD 544

Query: 1949 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 2128
            FLTSSFLITRKDTFYDR+AFSLMCSY+ D MD +DLPTP+++KP+ELWTGKQLFSVLLRP
Sbjct: 545  FLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRP 604

Query: 2129 HAKMRVYLNLTVAEKSY-------MKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNK 2287
            HA +RVY+NL + EK+Y        K +ETMCP DG+VY RNSELISGQLGKATLGNGNK
Sbjct: 605  HANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNGNK 664

Query: 2288 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 2467
            DG+YS+LLRDY  +AAATCMNRLAKLSARWIGNHGFSIGI+DVQPG  L  EK  TI   
Sbjct: 665  DGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNG 724

Query: 2468 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 2647
            Y HC   I  Y  G L L  GCD+ +TLE++I+E LN +RE   +VCMK L+WRNSPLIM
Sbjct: 725  YRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSPLIM 784

Query: 2648 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 2827
            SQCGSKGSPINI QMIACVGQQSVGG RAP+GFIDR+LPHF + +K P AKGFV NSFY+
Sbjct: 785  SQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYS 844

Query: 2828 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQF 3007
            GLSATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDL + YDNTV++A   IVQF
Sbjct: 845  GLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGIVQF 904

Query: 3008 VYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFK 3187
            +YG D +DPA ME K G+PLNF+RLFMK KATC A + ++L+  +I  IV    +S L K
Sbjct: 905  LYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDISNIV----QSLLLK 960

Query: 3188 SSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKL---TKEEHSEE 3358
             + T +G                C ++F  SL  F+  +       +KL    + E+ E 
Sbjct: 961  HNGTLDG---------------ICSESFRKSLSSFLGDQAKRLECLMKLVDGVEVENFEN 1005

Query: 3359 DR---------YHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXX 3511
             +          + E +A  +SGIT+ QL VFL+TC+ RY  K+                
Sbjct: 1006 IKNVEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIG 1065

Query: 3512 EPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXX 3691
            EPGTQMTLKTFHFAGVASMN+T GVPR            TP+IT  L             
Sbjct: 1066 EPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVN------ 1119

Query: 3692 XXXVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKES 3871
                AAR++KGRI++T+L QVAKSIK   TSRSAS+ VTLD   I  AQLS+ A+ V+E 
Sbjct: 1120 ----AARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVREL 1175

Query: 3872 ILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINT 4051
            IL TPK+K + Q IN+L+D KLEVF  P   R+K  FE    LH LK+ L  VVVKGI T
Sbjct: 1176 ILETPKIKRKLQRINVLEDGKLEVF--PGGDRNKLHFE----LHSLKNMLPAVVVKGIKT 1229

Query: 4052 IERVII----INEAKKEDPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCL 4219
            +ERV+I    +++A+ +  G   K  + VEG GL AVMGTEGVDG  T SNHI+EVQ+ L
Sbjct: 1230 VERVVIAQKKLDDAENDQGG--PKYNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETL 1287

Query: 4220 GIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLML 4399
            GIEAARK IIDEI+ TM SHGM+IDIRHMMLLAD+MT +G VLGITR+G+Q+M  SVLML
Sbjct: 1288 GIEAARKCIIDEIKGTMESHGMSIDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLML 1347

Query: 4400 ASFEKTADHLFNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQ 4537
            ASFEKT+DHLFNA+V G+ DKIEGVSECIIMGIP+ +GTG+LK++Q
Sbjct: 1348 ASFEKTSDHLFNASVKGKDDKIEGVSECIIMGIPVAIGTGVLKIQQ 1393


>gb|EYU23204.1| hypothetical protein MIMGU_mgv1a000506mg [Mimulus guttatus]
          Length = 1109

 Score = 1669 bits (4322), Expect = 0.0
 Identities = 843/1122 (75%), Positives = 950/1122 (84%)
 Frame = +2

Query: 1217 TESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGK 1396
            ++SQ   +NW+ L+ EVAQYINS+ R     S+ N++PLSGF+QRLKGK GRFRGNLSGK
Sbjct: 6    SQSQSLTNNWDSLQVEVAQYINSDVRVPLQYSE-NTKPLSGFVQRLKGKHGRFRGNLSGK 64

Query: 1397 RVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAK 1576
            RVEFTGRTVISPDPNLKI EVAVPILMA+IL+YPERVSHHNIE+LRQ VRNGP KYPGAK
Sbjct: 65   RVEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPTKYPGAK 124

Query: 1577 FIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARI 1756
            FIK PDG EISL  + R  HAD L+YG IV RHL+DGD++LFNRQPSLHRMSIMSHRARI
Sbjct: 125  FIKHPDGTEISLTSKVRHRHADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRARI 184

Query: 1757 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1936
            MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA
Sbjct: 185  MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 244

Query: 1937 STQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSV 2116
            STQDFLTSS+LITRKDTFYDR++FSL+CSY+GDAMD IDLPTPALVKPVELWTGKQLFS+
Sbjct: 245  STQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVELWTGKQLFSI 304

Query: 2117 LLRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGI 2296
            LLRPHAKMRVY+NLTVAEK+Y KS ETMCPKDGFVYIRNSELISGQLGKATLGNG+KDG+
Sbjct: 305  LLRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKATLGNGSKDGL 364

Query: 2297 YSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGH 2476
            YSVLLRDY  HAAATCMNRLAKLSARWIGNHGFSIGINDVQPG  LNKEKKVTID  YG 
Sbjct: 365  YSVLLRDYSAHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGIVLNKEKKVTIDKGYGQ 424

Query: 2477 CTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQC 2656
            C DYI  Y SGSL+L PGC++AETLE+ I+ TLNNIRE TANVCM NL+WRNSPLIMSQC
Sbjct: 425  CIDYIGSYKSGSLDLLPGCNNAETLEANITGTLNNIRERTANVCMNNLHWRNSPLIMSQC 484

Query: 2657 GSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLS 2836
            GSKGSPINI QM+ACVGQQSVGGRRAPNGF+DRTLPHFE+ AKDPDAKGFVQNSFYTGLS
Sbjct: 485  GSKGSPINIAQMVACVGQQSVGGRRAPNGFVDRTLPHFEREAKDPDAKGFVQNSFYTGLS 544

Query: 2837 ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYG 3016
            ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL+KALEDLS+ YD TVRNAS CIVQFVYG
Sbjct: 545  ATEFFFHTMGGREGLVDTAVKTADTGYMARRLMKALEDLSVHYDGTVRNASVCIVQFVYG 604

Query: 3017 GDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSV 3196
            GDAMDP QMEEK+GLPLNFERLFMKAKATCPA++QK L+ +EI + + E I  +L +S+ 
Sbjct: 605  GDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEIIGDRLSESTG 664

Query: 3197 TFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYHLE 3376
            T EG    S     + +KEG ++ F  SL+ FI+KK P+S+L LKL  +EH +ED+ +LE
Sbjct: 665  TPEG--ESSQAFSASSNKEGGMETFDNSLRKFIQKKYPNSDLMLKLNGKEHPDEDKGYLE 722

Query: 3377 NVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAG 3556
             +ASNI G+T+ QLMVFL TCISRY  KK                EPGTQMTLKTFHFAG
Sbjct: 723  KIASNICGVTRQQLMVFLETCISRYSLKKIEGGTAIGAIGAHSIGEPGTQMTLKTFHFAG 782

Query: 3557 VASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVKGRIER 3736
            VASMNVTLGVPR            TP+IT  L                + A++VKGRIE+
Sbjct: 783  VASMNVTLGVPRIKEIINAAKKINTPIITTAL----------QSDNNEIIAKIVKGRIEK 832

Query: 3737 TLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQAQHIN 3916
            TLLEQVAKSIKTSQ SRSASI++TLD  +I GA LS+ A +VKESIL+T +MKL+ Q + 
Sbjct: 833  TLLEQVAKSIKTSQASRSASIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQQVK 892

Query: 3917 ILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKEDP 4096
            +LD  KLE+ ++   K+       QF LHGLK+++SKVVVKGI+T+ER II+NEAK++DP
Sbjct: 893  VLDHRKLEIVMHADKKKL------QFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDP 946

Query: 4097 GQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSS 4276
               KK+KLLVEGTGLL+VMG EGV+G  TTSNHI+EVQ  LGIEAARKKIIDEIQYTMSS
Sbjct: 947  SANKKMKLLVEGTGLLSVMGIEGVEGRKTTSNHIIEVQHTLGIEAARKKIIDEIQYTMSS 1006

Query: 4277 HGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRV 4456
            HGMTIDIRHMMLLADLMTFKGEVLGITRYGVQ+M+DSVLMLASFE+T+DHLFNA+ +G+V
Sbjct: 1007 HGMTIDIRHMMLLADLMTFKGEVLGITRYGVQKMKDSVLMLASFERTSDHLFNASAHGKV 1066

Query: 4457 DKIEGVSECIIMGIPMQLGTGMLKVRQSVPPVKLTYGPDPII 4582
            DKIEGVSECIIMGIP+Q+GTGMLKVRQSV P++LTYGPDPII
Sbjct: 1067 DKIEGVSECIIMGIPVQIGTGMLKVRQSVKPIELTYGPDPII 1108


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score = 1658 bits (4293), Expect = 0.0
 Identities = 888/1421 (62%), Positives = 1047/1421 (73%), Gaps = 33/1421 (2%)
 Frame = +2

Query: 419  LSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGPPNK-SGKCETCAANFTNCPGHC 595
            +SG +I K +E QV+ G YYD  RKP+  GLLDP +GP  K S  CETC A+F  CPGH 
Sbjct: 2    MSGAEILKAAECQVHLGSYYDSTRKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHF 61

Query: 596  GHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDRQDFLRRMRNPKLEHLKKNDIL 775
            G+L L LPVFNVGY+  I+ I+KCICK CSRIL  EK  +  L++MRNP++EHL+K++++
Sbjct: 62   GYLNLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELV 121

Query: 776  KAIVTKCNSMVGGNQKAVECSRCGYVNGKVKR--QQLKIIHERKDIADNGLDEFRSALSH 949
            K IV KC+SM   + KAV+C+RCG +NG VK+    L IIH+R  + D  L+E RSA++H
Sbjct: 122  KKIVKKCSSMT--SNKAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAH 179

Query: 950  TQ---ANVSLPSTIDAKM-VYELLKNMRDEDCELLYLNDRPEKLMVTSILVPPTAIRPSV 1117
            T+   A +SL + I   + V  L K + +EDCE+L L DRPEKL++T+I VPP +IRPSV
Sbjct: 180  TKESRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSV 239

Query: 1118 FVDGGDQSNENDITERLKFIIQANACLRSEMAETESQ--RFLSNWELLRDEVAQYINSEA 1291
            F DG  QSNENDITERLK IIQANA LR E+ E      ++L +W+ L+  VA Y+NS+ 
Sbjct: 240  FTDGL-QSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDV 298

Query: 1292 RGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAVPI 1471
            R + NN +   +PLSGF+QRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVA+PI
Sbjct: 299  R-VPNNVEVG-KPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPI 356

Query: 1472 LMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPDGHEISLVYEARKHHADQLR 1651
             MARIL+YPERVSHHNIEKLRQ V NGPQKYPGA  ++ PDG    L+   RK  A++L 
Sbjct: 357  HMARILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELT 416

Query: 1652 YGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEM 1831
            +GCIV RHLEDGDVVLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEM
Sbjct: 417  FGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEM 476

Query: 1832 NMHVPQTEEARTEALMLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSAF 2008
            NMHVPQTEEARTEAL+LMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFYDR+AF
Sbjct: 477  NMHVPQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFYDRAAF 536

Query: 2009 SLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHAKMRVYLNLTVAEKSYMK- 2185
            SLMCSY+ D MD IDLPTPA++KP+ELWTGKQLFSVLLRP+A +RVY+NL V EK Y K 
Sbjct: 537  SLMCSYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKP 596

Query: 2186 ------SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCM 2347
                   KETMCP DGFVYIRNSELISGQLGKATLGNGNKDG+YS+LLRDY PHAAATCM
Sbjct: 597  KKGDKREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHAAATCM 656

Query: 2348 NRLAKLS--ARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLEL 2521
            NRLAKL   ARWIGNHGFSIGI+DVQPG  L   K  TI   Y  C   I +Y  G L L
Sbjct: 657  NRLAKLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLL 716

Query: 2522 SPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQCGSKGSPINICQMIAC 2701
             PGCD+ +TLES+I+E LN +RE   +VCMK L+WRNSPLIMSQCGSKGS INI QM+AC
Sbjct: 717  KPGCDATQTLESEITEKLNKLREEAGDVCMKELHWRNSPLIMSQCGSKGSVINISQMVAC 776

Query: 2702 VGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGL 2881
            VGQQSVGGRRAP+GFIDR+LPHF + +K P AKGFV NSFY+GL ATEFFFHTM GREGL
Sbjct: 777  VGQQSVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFVANSFYSGLMATEFFFHTMAGREGL 836

Query: 2882 VDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGL 3061
            VDTAVKTADTGYMSRRLIK LEDLSI YDNTVRNAS CIVQF+YG D +DPA ME K G+
Sbjct: 837  VDTAVKTADTGYMSRRLIKGLEDLSIQYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGV 896

Query: 3062 PLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESKLFKSSVTFEGGHPESSTLPDA 3241
            PLN +RLF K KATCP  ++ +L+  +I ++V    E+ L K  +   G           
Sbjct: 897  PLNLDRLFSKVKATCPVREEDYLSPLDISDVV----ENLLLKHDMALGG----------- 941

Query: 3242 PSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTK--EEHSEE---------DRYHLENVAS 3388
                 C +AF  SL  F+          +KL    E+ + E         +   +E +A 
Sbjct: 942  ----ICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSENIQTGGIRGNSKIIERLAH 997

Query: 3389 NISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASM 3568
             I G+++ Q+ VF++TCI+RY  K+                EPGTQMTLKTFHFAGVASM
Sbjct: 998  KIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1057

Query: 3569 NVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVKGRIERTLLE 3748
            N+T GVPR            TP+ITA L                 AAR+ KGRI++T+L 
Sbjct: 1058 NITQGVPRIKEIINGAKKISTPIITAEL----------EQNTNVTAARIAKGRIQKTVLG 1107

Query: 3749 QVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQAQHINILDD 3928
            QVAKSIK   TSRSAS+++TLD   I  AQLS+ A+ VKE+ILRTP++KL+ QHI +LD 
Sbjct: 1108 QVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHIKVLDT 1167

Query: 3929 HKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAK--KEDPGQ 4102
             KLEV   P   R +  FE    LH LK+ L  ++V+GI T+ER +I  +    K +  +
Sbjct: 1168 RKLEVI--PLGDRERVHFE----LHNLKNLLPSIIVQGIKTVERAVIAQKKHDGKANDQE 1221

Query: 4103 IKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTMSSHG 4282
            +    +LVEG GL  VMGTEGVDGC TTSNH++EVQ+ LGIEAARK IIDEI  TM  HG
Sbjct: 1222 LPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDEINQTMEHHG 1281

Query: 4283 MTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNGRVDK 4462
            M+IDIRHMMLL DLMTFKGEVLGITR+G+Q+M  SVLMLASFEKTADHL++AAV GR DK
Sbjct: 1282 MSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDK 1341

Query: 4463 IEGVSECIIMGIPMQLGTGMLKVRQSV-PPVKLTYGPDPII 4582
            IEGVSECIIMGIPMQ+GTG+LKV+Q V PP  L YG D II
Sbjct: 1342 IEGVSECIIMGIPMQIGTGILKVQQRVDPPPVLNYGSDSII 1382


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score = 1643 bits (4254), Expect = 0.0
 Identities = 876/1428 (61%), Positives = 1043/1428 (73%), Gaps = 18/1428 (1%)
 Frame = +2

Query: 353  FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 532
            FTK+P++ED GPRKI++++FSTLS ++I K++EVQV++G YYD  +KP+ GGLLDP MGP
Sbjct: 11   FTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70

Query: 533  PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 712
             NKS  C TC  NF +CPGH G+L LALPVFNVGY+ TIV I+KCICK C+RILL E  R
Sbjct: 71   ANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGCARILLDEDTR 130

Query: 713  QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVKR--QQLKI 886
            +  L++MR+ K   L K D +K  V K  S      K V C RCGY+NG VK+    L I
Sbjct: 131  KKHLKKMRSSKKSELDKIDFVKVRVIKDCS------KVVNCPRCGYINGSVKKLPASLTI 184

Query: 887  IHERKDIADNGLDEFRSALSH---TQANVSLPSTI-DAKMVYELLKNMRDEDCELLYLND 1054
            IH+     +  ++E  SALS    ++A  ++ + I +   V  L K M DEDCELLY+ +
Sbjct: 185  IHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDEDCELLYVAE 244

Query: 1055 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAE-TESQR 1231
            RPEKL++T+++VPP AIRPSV +D    SNENDITERLK IIQANA LR E+ E T S +
Sbjct: 245  RPEKLIMTNVVVPPIAIRPSVVMDES-LSNENDITERLKNIIQANAVLRQELQESTFSSK 303

Query: 1232 FLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFT 1411
            FL  W++L++EVAQ+INS+ RG+    Q  ++ L+GF+QRLKGK GRFRGNLSGKRVE+T
Sbjct: 304  FLDGWDILQNEVAQFINSDVRGIPFYMQP-TKQLAGFVQRLKGKHGRFRGNLSGKRVEYT 362

Query: 1412 GRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTP 1591
            GRTVISPDPNLKI+EVA+PI MARILTYPERV+HHNIEKLRQ VRNGP KYPGA+ ++  
Sbjct: 363  GRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRD 422

Query: 1592 DGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRT 1771
             GH  SL    RK  AD+LR G IV RHLEDGD+VLFNRQPSLHRMSIM HRARIMPWRT
Sbjct: 423  GGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 482

Query: 1772 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1951
            LRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGV+NNLCTPKNGEILVASTQDF
Sbjct: 483  LRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVASTQDF 542

Query: 1952 LTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPH 2131
            LTSSFLITRKDTFYDRS FSL+CSY+GD MD IDLPTPA+VKPVELW+GKQLFS++LRPH
Sbjct: 543  LTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSIILRPH 602

Query: 2132 AKMRVYLNLTVAEKSYMKSK---------ETMCPKDGFVYIRNSELISGQLGKATLGNGN 2284
            A MRVY+NLTV E++Y + K         +T+CP DGFVY RNSELISGQ+GK TLGNGN
Sbjct: 603  ANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVGKVTLGNGN 662

Query: 2285 KDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDM 2464
            KDG++SVLLRDY  HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP + L  +K  TI  
Sbjct: 663  KDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINKKDETISE 722

Query: 2465 EYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLI 2644
             Y  C  +I  +  G LEL  GCD+A+TLE++I+  LN +R+    VCM+ L+WRNSPLI
Sbjct: 723  GYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTLHWRNSPLI 782

Query: 2645 MSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFY 2824
            MSQCGSKGS INI QM+ACVGQQSVGGRR PNGFIDR+LPHF + +K P AKGFV NSFY
Sbjct: 783  MSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVANSFY 842

Query: 2825 TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQ 3004
            +GLSATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K+LEDL + YD TVRNA   IVQ
Sbjct: 843  SGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSIVQ 902

Query: 3005 FVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCP-AMDQKFLTTDEIKEIVTETIESKL 3181
            F YG D MDPA ME K G PLNFERLF+K+KA CP   D + L++ ++ ++V E +    
Sbjct: 903  FCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVVHEKLSE-- 960

Query: 3182 FKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEED 3361
            F  S   E G  E     D          F  SL+ FI+          KLT+E  ++E 
Sbjct: 961  FDMSRLAEKGVFEVGFSAD----------FVESLQSFIKDNA-------KLTEEGFTDEH 1003

Query: 3362 RYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKT 3541
              +L+     ISGIT+ QL VFL  C+SRY SKK                EPGTQMTLKT
Sbjct: 1004 SQNLKKFGQRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTLKT 1063

Query: 3542 FHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVK 3721
            FHFAGVASMNVTLGVPR            TP+ITA+L                  AR+VK
Sbjct: 1064 FHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNAN----------TARIVK 1113

Query: 3722 GRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQ 3901
            GRIE+T L QVAKSIK   TSRSAS+++TLD  RI  A L+I A+ VKESILRT K KL+
Sbjct: 1114 GRIEKTNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANIVKESILRTKKTKLK 1173

Query: 3902 AQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEA 4081
             +HI ILD  KLEV     D RSK      F LH LK+ L  VVVKGI T++RV+I  + 
Sbjct: 1174 PEHIKILDIKKLEVVPQDVD-RSK----IHFQLHYLKNLLPTVVVKGIKTVDRVVISKDT 1228

Query: 4082 KKEDPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQ 4261
            K E      K +LLVEGTG   VMG EG+DG  T SNHI EV+  LGIEAAR+ I+ EI+
Sbjct: 1229 KAE------KFRLLVEGTGFREVMGVEGIDGRKTVSNHIHEVRDTLGIEAARESIVKEIK 1282

Query: 4262 YTM-SSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNA 4438
            YTM  +HGM IDIRHMMLLAD+MT  G +LGI R+G+ +M  SVLMLASFE+TAD LF A
Sbjct: 1283 YTMVDTHGMNIDIRHMMLLADMMTATGHILGINRFGISKMGKSVLMLASFERTADILFQA 1342

Query: 4439 AVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPVKLTYGPDPII 4582
            +V GR D I GVSE IIMGIP+Q+GTGM+KV+Q + P +L +G  PI+
Sbjct: 1343 SVRGRDDSIGGVSESIIMGIPIQIGTGMIKVKQRLDPPELPHGTSPIL 1390


>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
            gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
            Japonica Group] gi|38347455|emb|CAD41360.2|
            OSJNBa0076N16.24 [Oryza sativa Japonica Group]
            gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
            Japonica Group] gi|116310339|emb|CAH67354.1|
            OSIGBa0130B08.14 [Oryza sativa Indica Group]
            gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
            Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218195112|gb|EEC77539.1| hypothetical protein
            OsI_16437 [Oryza sativa Indica Group]
          Length = 1383

 Score = 1641 bits (4250), Expect = 0.0
 Identities = 860/1435 (59%), Positives = 1036/1435 (72%), Gaps = 16/1435 (1%)
 Frame = +2

Query: 326  MRRDQGSMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 505
            M R +  ++ TK+P+IEDVG R+I+SI+FS  SG ++++ +EVQV+  + Y+   KPV  
Sbjct: 1    MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60

Query: 506  GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 685
            GLLD  MG  NK G+C TC  +F  CPGH G+L LALPVFNVG+   I+ ++KCICK CS
Sbjct: 61   GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120

Query: 686  RILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKV 865
            R+LL EKDR +FL++MRNPK + L+K+ I+K +  KC        K   C  CG++NG  
Sbjct: 121  RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKC--------KLSRCPWCGFINGVA 172

Query: 866  K--RQQLKIIHERKDIADNGLDEFRSALSHTQANVSLPST--IDAKMVYELLKNMRDEDC 1033
            K  R  L I+H+     D   +E R ALSH +  +S+ +   +D  +V  L K M DEDC
Sbjct: 173  KKGRAGLIILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPAIVLSLFKRMTDEDC 232

Query: 1034 ELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMA 1213
            ELL L DRPEKL+VT I VPP  IRPSVFV GG  SNE+ IT  LK I   N+ L+  + 
Sbjct: 233  ELLNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENL- 291

Query: 1214 ETESQ--RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNL 1387
            +T  Q  +    W+ L+ +V +YINS+A  L  +         G +QRLKGK GRFRGNL
Sbjct: 292  QTGGQFMKCFDCWQHLQLQVVEYINSDAPSLPESQHR------GLVQRLKGKTGRFRGNL 345

Query: 1388 SGKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYP 1567
            SGKR E+TGRTVISPDPNL+ITEVA+PILMAR+LTYPERVS++NIEKLRQ +RNGP K+P
Sbjct: 346  SGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHP 405

Query: 1568 GAKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHR 1747
            GA FI  PDG ++ L Y  R+  A  L+YGC+V RHLEDGD+VLFNRQPSLHRMSIMSHR
Sbjct: 406  GANFIIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHR 465

Query: 1748 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 1927
            ARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEI
Sbjct: 466  ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEI 525

Query: 1928 LVASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQL 2107
            LVASTQDFLTSSFL+TRKD FYDRS+FSL+CSYLGDAM++IDLPTPAL+KP+ELWTGKQL
Sbjct: 526  LVASTQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQL 585

Query: 2108 FSVLLRPHAKMRVYLNLTVAEKSYMKSK------ETMCPKDGFVYIRNSELISGQLGKAT 2269
            FSVL+RP+A  +V+LNLTV EK Y   K      E MCP DGFVY RNSEL+SGQ+GKAT
Sbjct: 586  FSVLVRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKAT 645

Query: 2270 LGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKK 2449
            LGNGNKDG++S L+RDY  HAAA+CMNRLAK SAR+IGNHGFSIG++DVQPG+ LN+EKK
Sbjct: 646  LGNGNKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKK 705

Query: 2450 VTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWR 2629
            + ID  Y  C D I  Y+ G+L L PGC++A+TLE  I+  LN IRE    VCM  L+WR
Sbjct: 706  MKIDGGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWR 765

Query: 2630 NSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFV 2809
            NSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGFIDRTLPHF   +K P AKGFV
Sbjct: 766  NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFV 825

Query: 2810 QNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNAS 2989
             NSFYTGL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+FYD TVRNAS
Sbjct: 826  ANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNAS 885

Query: 2990 ACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETI 3169
              IVQF+YG D MDPA+ME K G PLN ++LFMK  ATCP   Q  L+  EI +I+ + +
Sbjct: 886  GGIVQFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKL 945

Query: 3170 ESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEK--KCPSSNLRLKLTKE 3343
                                  DA S +GC + F   L  F+E   K   S  R  L  E
Sbjct: 946  SEH-------------------DASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDE 986

Query: 3344 EH-SEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPG 3520
            +H  E      E++A+NISGI+  QL VFL TC+SRY  KK                EPG
Sbjct: 987  DHVGERHSSFEESIAANISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPG 1046

Query: 3521 TQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXX 3700
            TQMTLKTFHFAGVASMNVTLGVPR            TP+ITA L                
Sbjct: 1047 TQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAEL----------LSEKDV 1096

Query: 3701 VAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILR 3880
            ++AR+VKG +E+ +L +VA++IK    S   +++V LD  RI+   + I A SV+ SIL 
Sbjct: 1097 LSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEALHMGISADSVQLSILN 1156

Query: 3881 TPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIER 4060
             PK+KL+++H+ ++D  KL ++    DK SK ++E    LH LKS L KV+VKGI T+ER
Sbjct: 1157 HPKIKLKSEHVRVIDKSKLRIYPAGIDK-SKLLYE----LHHLKSMLPKVIVKGIPTVER 1211

Query: 4061 VIIINEAKKEDPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARK 4240
             +I    ++ D    K+ KLLVEGT LLAVMGT GVD   T SNHI+EV + LGIEAAR+
Sbjct: 1212 AVISETGEEND----KRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTLGIEAARR 1267

Query: 4241 KIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTA 4420
             IIDEIQYTM SHGM ID RHMMLLADLMT+KGE+LGITRYG+ +M+ SVLMLASFEKTA
Sbjct: 1268 SIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTA 1327

Query: 4421 DHLFNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPV-KLTYGPDPII 4582
            +HLFNA+ +GR D+IEGVSECIIMGIPMQLGTG+LKVRQ +  + +  Y PDPI+
Sbjct: 1328 EHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDPIL 1382


>ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Fragaria vesca subsp. vesca]
          Length = 1390

 Score = 1630 bits (4222), Expect = 0.0
 Identities = 860/1426 (60%), Positives = 1037/1426 (72%), Gaps = 25/1426 (1%)
 Frame = +2

Query: 344  SMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPH 523
            ++ FTK+P+IE+ G  +I   QF+ +S ++I K++  Q++ G+YYD  +KP+ GGLLD  
Sbjct: 9    TIAFTKEPFIEEEGHCRIAQWQFNAMSQSEISKMAATQIFLGRYYDSNQKPIRGGLLDAR 68

Query: 524  MGPPNKS-GKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLK 700
            +GP NK  G CETC A  ++CPGH G+L LA+PVFNVGY+ T+V ++KCICK CSRI+L 
Sbjct: 69   LGPANKQCGDCETCGAKLSDCPGHFGYLVLAVPVFNVGYLSTVVDVLKCICKSCSRIILD 128

Query: 701  EKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVKRQQ- 877
            +K R  FL  +R+PK +   K+  +K IV KC SM   N ++V+C +CGY+NG VKR Q 
Sbjct: 129  DKSRSRFLNVVRDPKKD---KSVTMKLIVKKCTSM-SSNNRSVKCPKCGYMNGSVKRAQG 184

Query: 878  -LKIIHERKDIADNGLDEFRSA---LSHTQANVSL-PSTIDAKMVYELLKNMRDEDCELL 1042
             L I+H         +D+F+S    +   +A+++L P  ++   V+ L K M DEDCELL
Sbjct: 185  MLAIVH-------GAVDDFKSVNPVMKDPKASINLQPHMLNPVKVFSLFKRMLDEDCELL 237

Query: 1043 YLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETE 1222
             L  RPE L++T+I VPP AIRPSV VDG  QSNENDITERLK IIQ NAC++ +++E  
Sbjct: 238  NLKSRPENLIMTTIAVPPIAIRPSVLVDGS-QSNENDITERLKKIIQTNACVQQDLSEGS 296

Query: 1223 SQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRV 1402
            + RFLSNWE+L+ EVA YINS+ RG+  +  +N++PL+G +QRLKGK GRFRGNL GKRV
Sbjct: 297  TTRFLSNWEILQAEVALYINSDVRGVPYHMTANAKPLNGLVQRLKGKTGRFRGNLCGKRV 356

Query: 1403 EFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFI 1582
            E+TGRTVISPDPNLKITEV +PI MA+IL+YPERVS HNIEKLR+ V NGP KYPGA  +
Sbjct: 357  EYTGRTVISPDPNLKITEVGIPIQMAQILSYPERVSDHNIEKLRRCVANGPFKYPGALVL 416

Query: 1583 KTPDGHEISL-VYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIM 1759
            K  +G E SL   + R  HAD L+ G IV RHLEDGD+VLFNRQPSLHRMSIM HRARIM
Sbjct: 417  KCQNGEEWSLKAGQKRMSHADNLKPGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIM 476

Query: 1760 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1939
            PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+MLMGVQNNLCTPKNGEILVAS
Sbjct: 477  PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMGVQNNLCTPKNGEILVAS 536

Query: 1940 TQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVL 2119
            TQDFLTSSFLITRKDTFYDR++FSLMCSY+GD  + +DLPTPA+VKP+ELWTGKQL+SVL
Sbjct: 537  TQDFLTSSFLITRKDTFYDRASFSLMCSYMGDGTEHVDLPTPAVVKPIELWTGKQLYSVL 596

Query: 2120 LRPHAKMRVYLNLTVAEKSYMKSK-------ETMCPKDGFVYIRNSELISGQLGKATLGN 2278
            +RP++ +RVYLNLTV EKSY   K       E MCP DGFVY RNSEL+SGQLGK TLGN
Sbjct: 597  VRPNSNVRVYLNLTVREKSYSNRKTEDGREIEAMCPNDGFVYFRNSELLSGQLGKGTLGN 656

Query: 2279 GNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTI 2458
            GNKDG++SVLLRDY  HAAA+CMNR+AKLSARWIGNHGFSIGI+DVQP D L  EK+  I
Sbjct: 657  GNKDGLFSVLLRDYKAHAAASCMNRVAKLSARWIGNHGFSIGISDVQPSDILYGEKEKII 716

Query: 2459 DMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSP 2638
               Y  C D I+ Y  G L L+PGCD+A++LES I+  LN+IR+ T  +CM+ L+WRNSP
Sbjct: 717  KKGYDKCDDQIKLYKEGQLRLAPGCDAAQSLESGITAVLNDIRDQTGKLCMQTLHWRNSP 776

Query: 2639 LIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNS 2818
            LIMSQCGSKGS INI QM+ACVGQQSVGGRRAPNGFIDR+LPHF +    P AKGFV +S
Sbjct: 777  LIMSQCGSKGSAINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKVNTPAAKGFVASS 836

Query: 2819 FYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACI 2998
            FY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL K LEDLS+ YD TVR A+  I
Sbjct: 837  FYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLSKVLEDLSVQYDKTVRAANGGI 896

Query: 2999 VQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKEIVTETIESK 3178
            VQF YG D MDPA ME K+G PL+F RLF +AKATCPA + + L+ DE+ EIV     S+
Sbjct: 897  VQFCYGDDGMDPAMMEGKSGAPLDFYRLFFRAKATCPAGESESLSPDEVSEIV----RSR 952

Query: 3179 LFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIE---KKCPSSNLRLKLTKEEH 3349
            L +  +T +G               GC   F  S++ F++   K    +     L +   
Sbjct: 953  LSEQDMTPDG---------------GCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPG 997

Query: 3350 SEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQM 3529
             E     L+N+  NISG+T  QL VFL TCISRY SKK                EPGTQM
Sbjct: 998  WEVKSATLQNIVQNISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQM 1057

Query: 3530 TLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAA 3709
            TLKTFHFAGVASMNVTLGVPR            TP+IT VL                + A
Sbjct: 1058 TLKTFHFAGVASMNVTLGVPRIKEIINGAKNIHTPIITTVL----------ECDNNPMIA 1107

Query: 3710 RLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPK 3889
            R+V GRIE+T L QVA+ I+   + R+A + V LD   I  A LSI A+ VK+SIL TP+
Sbjct: 1108 RMVAGRIEKTNLGQVAECIEIVMSPRAAYVEVKLDMAVIQDAHLSIDANVVKQSILGTPR 1167

Query: 3890 MKLQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVII 4069
            +KL+ +HI + D+  +EV  +  D+R     +  F L+ LKS L  V+V+GI TIERV+I
Sbjct: 1168 IKLKHEHIRVPDNQTVEVHSHEKDRR-----KLHFHLYYLKSILPNVIVRGIKTIERVVI 1222

Query: 4070 INEAKKEDP-------GQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIE 4228
              E  K D        G  KK KL  EG GLLAVM T+GVDGC TTSN I+EVQQ LGIE
Sbjct: 1223 DEEKVKRDKKDIDIKCGDEKKYKLFAEGKGLLAVMSTKGVDGCKTTSNDIIEVQQTLGIE 1282

Query: 4229 AARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASF 4408
            AAR  II+EI+YTM SHGM ID RHMMLLAD+MTF+G VLGITR+GVQ+M  SVLMLASF
Sbjct: 1283 AARTCIIEEIKYTMKSHGMNIDDRHMMLLADVMTFRGLVLGITRFGVQQMGKSVLMLASF 1342

Query: 4409 EKTADHLFNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVP 4546
            E+T DHLFNA+V G VDKIEGVSE IIMGIPM +GTGM K++Q +P
Sbjct: 1343 ERTDDHLFNASVQGTVDKIEGVSESIIMGIPMPIGTGMFKIKQRLP 1388


>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Cicer arietinum]
          Length = 1399

 Score = 1627 bits (4214), Expect = 0.0
 Identities = 853/1424 (59%), Positives = 1048/1424 (73%), Gaps = 14/1424 (0%)
 Frame = +2

Query: 353  FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 532
            FTK+P+IED+GPRKI  I +STLS  +I K+ EVQV++G YYD  RKP   GLLD  MGP
Sbjct: 11   FTKEPFIEDLGPRKIAGITYSTLSEAEISKIGEVQVWKGTYYDAFRKPEADGLLDSRMGP 70

Query: 533  PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 712
             NKS  C TC  NF +C GH G+L L  PVFNVGY+ T+V I+KCICK C+ ILL E  R
Sbjct: 71   ANKSLVCATCHGNFADCQGHYGYLPLVQPVFNVGYLNTMVKILKCICKGCAGILLDEDTR 130

Query: 713  QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVK--RQQLKI 886
            + +L++MRN KL+ L+K  +L++I+ +  S      K ++C RCGY+NG VK  R  L+I
Sbjct: 131  KKYLKKMRNSKLDELQKIQLLESIMKRFRSA-----KFIKCQRCGYINGIVKLTRSTLRI 185

Query: 887  IHERKDIADNGLDEFRSALSHTQ----ANVSLPSTIDAKMVYELLKNMRDEDCELLYLND 1054
            +H+     ++ + E +SALSH +     N      +D K V+ L   M DEDC LLYL +
Sbjct: 186  VHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSDEDCALLYLAE 245

Query: 1055 RPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETESQRF 1234
            RPEKL++T+I VPP  IRPSV +DG  QSNENDITE+L+ IIQANA L  E+ E  S +F
Sbjct: 246  RPEKLIITNIAVPPIVIRPSVIMDGS-QSNENDITEKLRKIIQANAALHKELEE--STKF 302

Query: 1235 LSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEFTG 1414
               +E+L+  VAQYINS+ +G   + Q+ S+PL+GF+QR+KGKQGRFR NLSGKRVE+TG
Sbjct: 303  QGGFEMLQFLVAQYINSDVKGGPYSMQA-SKPLTGFVQRIKGKQGRFRSNLSGKRVEYTG 361

Query: 1415 RTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKTPD 1594
            RTVISPDPNLKITEVA+PI MARILTYPERV+HHNIEKLRQ +RNGP KYPGAK ++   
Sbjct: 362  RTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLLRHAG 421

Query: 1595 GHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTL 1774
            G   +L    RK  AD+LR+G IV RHLEDGDVVLFNRQPSLHRMS+M HRARIMPWRTL
Sbjct: 422  GTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMPWRTL 481

Query: 1775 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFL 1954
            RFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LM VQNNLCTPKNGEILVASTQDFL
Sbjct: 482  RFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVASTQDFL 541

Query: 1955 TSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRPHA 2134
            TSSFLITRKDTFYDRS FSL+CSY+GD MD IDLPTPA++KPVELW+GKQLFS+LLRPHA
Sbjct: 542  TSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILLRPHA 601

Query: 2135 KMRVYLNLTVAEKSY-------MKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDG 2293
             +RVY+NLTV EK++        +  +TMCP DGFVY RNSELISGQLGK TLGNGNKDG
Sbjct: 602  NVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGFVYFRNSELISGQLGKVTLGNGNKDG 661

Query: 2294 IYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEYG 2473
            ++SVLLRDY  HAAA+CMNRLAK SARWIGNHGFSIGI+DVQP + L   KK TI   Y 
Sbjct: 662  LFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFSIGIDDVQPKEILIHRKKETITTGYS 721

Query: 2474 HCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMSQ 2653
             C  +I  +  G LEL+PGCD+A+TLE+KI + LN++R+ TA VCM+ L+WRNSPLIMSQ
Sbjct: 722  ECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLNSLRDTTAKVCMQTLHWRNSPLIMSQ 781

Query: 2654 CGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTGL 2833
            CGSKGSPINICQM+ACVGQQSVGG RA NGF+DR+LPHF K AK P  KGFV NSF+TGL
Sbjct: 782  CGSKGSPINICQMVACVGQQSVGGCRAANGFVDRSLPHFTKKAKTPADKGFVANSFFTGL 841

Query: 2834 SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFVY 3013
            SATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL + YD TVR+ +  IVQF Y
Sbjct: 842  SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGGIVQFCY 901

Query: 3014 GGDAMDPAQMEEKTGLPLNFERLFMKAKATCPA-MDQKFLTTDEIKEIVTETIESKLFKS 3190
            G D MDP+ ME K G PLNF+RLF+K+KA CP+  D   L++ ++ E++ + +      S
Sbjct: 902  GDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPSDGDDIILSSSDVCEVIRKKL------S 955

Query: 3191 SVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRYH 3370
             V       + ++  D  S  G    F  SL+ F++      N +L     E+  ++  +
Sbjct: 956  EVGMSKLVEKDASENDIMSVVGFSDDFIKSLQAFVK-----DNTKLTEAIAENDSKNLTN 1010

Query: 3371 LENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 3550
            L+N    ISGI++ QL VFL  C+SRY+ KK                EPGTQMTLKTFHF
Sbjct: 1011 LKNFIPRISGISRRQLEVFLDICLSRYRIKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHF 1070

Query: 3551 AGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVKGRI 3730
            AGVASMNVTLGVPR            TP++TA+L                  AR+VKGRI
Sbjct: 1071 AGVASMNVTLGVPRIIEIINGAKDIKTPIMTAILERDDNAN----------TARMVKGRI 1120

Query: 3731 ERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQAQH 3910
            E+T L QVAKSIK   TSRSA+++++LD +RI  A L+I A +VKESILRT K+KL+A++
Sbjct: 1121 EKTNLGQVAKSIKVVMTSRSATVVISLDMERIQDAHLNIDAHTVKESILRTAKLKLKAEN 1180

Query: 3911 INILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKKE 4090
            + +LD  KL+V+      R     E  F L+ LK+ L  VVVKG+ T+ER ++  E  K+
Sbjct: 1181 VKVLDIKKLQVY-----PRLSGRNEIHFQLNILKNLLPSVVVKGVKTVERAVL--EIDKK 1233

Query: 4091 DPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQYTM 4270
            D  +++K  LLVEGTGL  V+G EGVDG  T SNH++E+   LGIEAAR  IID+IQYTM
Sbjct: 1234 DK-KVEKFALLVEGTGLQQVLGIEGVDGRKTRSNHVMEMLNVLGIEAARSTIIDQIQYTM 1292

Query: 4271 SSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAAVNG 4450
             SHGM+ID+RH+MLLAD+MT +G+VLG+TR+G+Q+M  SVLMLASFE + DHLF+A++ G
Sbjct: 1293 GSHGMSIDVRHIMLLADIMTVRGQVLGMTRHGIQKMGRSVLMLASFESSTDHLFDASMRG 1352

Query: 4451 RVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPVKLTYGPDPII 4582
            R D IEGVS+CIIMG P+++GTGM+ ++Q + P  L  G DPI+
Sbjct: 1353 RGDPIEGVSDCIIMGKPIRVGTGMIDIKQRLDPPVLPKGIDPIL 1396


>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
            gi|561005141|gb|ESW04135.1| hypothetical protein
            PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score = 1625 bits (4207), Expect = 0.0
 Identities = 868/1427 (60%), Positives = 1041/1427 (72%), Gaps = 17/1427 (1%)
 Frame = +2

Query: 353  FTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGGGLLDPHMGP 532
            FTK+P++ED GPRKI++++FS LS ++I KL EVQV++G YYD  +KP+ GGLLDP MGP
Sbjct: 11   FTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70

Query: 533  PNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCSRILLKEKDR 712
             NKS  C TC  NF +CPGH G+L LALPVFNVGY+G+IV I+KCICK C+RILL E  R
Sbjct: 71   ANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGCARILLDEDTR 130

Query: 713  QDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKVKR--QQLKI 886
            +  L++MR+ K   L K D +K  + K  S      K V C RCGY+NG VK+    L I
Sbjct: 131  KKHLKKMRSSKKSELDKMDFVKVRIIKDCS------KVVNCPRCGYINGSVKKLPASLII 184

Query: 887  IHERKDIADNGLDEFRSALSHTQ-----ANVSLPSTIDAKMVYELLKNMRDEDCELLYLN 1051
            +H+     +N ++E  S LS  +     ANVS    ++   V  L + M DEDCELLY+ 
Sbjct: 185  MHDCSKCKNNIVEELESTLSRIKDSKATANVS-NRILNPFQVLSLFRKMLDEDCELLYVA 243

Query: 1052 DRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMAETE-SQ 1228
            +RPEKL++T+I+VPP AIRPSV +D    SNENDITERLK IIQANA LR E+ E+  S 
Sbjct: 244  ERPEKLIITNIVVPPIAIRPSVVMDES-LSNENDITERLKNIIQANAVLRQELQESSVSS 302

Query: 1229 RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLSGKRVEF 1408
            +FL  WE+L++EVAQ+INSE RG+    QS ++ L+GF+QRLKGK GRFRGNLSGKRVE+
Sbjct: 303  KFLDGWEILQNEVAQFINSEVRGIPFYMQS-TKQLAGFVQRLKGKHGRFRGNLSGKRVEY 361

Query: 1409 TGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPGAKFIKT 1588
            TGRTVISPDPNLKI+EVA+PILMA ILTYPERV+HHNIEKLRQ VRNGP KYPGA+ ++ 
Sbjct: 362  TGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRR 421

Query: 1589 PDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWR 1768
              GH  SL    RK  AD+LR G IV RHLEDGD+VLFNRQPSLHRMSIMSHRARIMPWR
Sbjct: 422  DGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 481

Query: 1769 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1948
            TLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVASTQD
Sbjct: 482  TLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQD 541

Query: 1949 FLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLFSVLLRP 2128
            FLTSSFL+TRKDTFYDRSAF+ +C+++GD +D IDLPTPA+VKPVELW+GKQLFS+LLRP
Sbjct: 542  FLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLLLRP 601

Query: 2129 HAKMRVYLNLTVAEKSYMK------SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKD 2290
            HA  +VY+NLTV EK+Y K        +T+CP DGFVY RN+ELISGQ+GK TLGNGNKD
Sbjct: 602  HANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGKVTLGNGNKD 661

Query: 2291 GIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDMEY 2470
            G++SVLLRDY  HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP + L K+K  T+   Y
Sbjct: 662  GLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKKKDETLSEGY 721

Query: 2471 GHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIMS 2650
              C ++I+ +  G LEL  GCD+ +TLE++I+  LN +R+    VCM+ L+WRNSPLIMS
Sbjct: 722  KKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPLIMS 781

Query: 2651 QCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYTG 2830
            QCGSKGSPINI QM+ACVGQQSVGGRRAPNGF+DR+LPHF   AK P AKGFV NSFY+G
Sbjct: 782  QCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSFYSG 841

Query: 2831 LSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDNTVRNASACIVQFV 3010
            LSATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K++EDL + YD TVRNA   IVQF 
Sbjct: 842  LSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIVQFC 901

Query: 3011 YGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAM-DQKFLTTDEIKEIVTETIESKLFK 3187
            YG D MDP  ME K G PLNFERLF+K+KA CP   D + L++ ++ ++V E +    F 
Sbjct: 902  YGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQEKLSE--FG 959

Query: 3188 SSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEKKCPSSNLRLKLTKEEHSEEDRY 3367
             S   E G  E     D          F  SL+ FI+          KLT+E  ++++  
Sbjct: 960  VSREVEKGVLEVGFSAD----------FVQSLQSFIKD-------NTKLTEETFTDDNSQ 1002

Query: 3368 HLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXXXXXXXXEPGTQMTLKTFH 3547
             L+     ISGIT+ QL VFL  C+SRY SKK                EPGTQMTLKTFH
Sbjct: 1003 ILKKFGERISGITRAQLEVFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFH 1062

Query: 3548 FAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXXXXXXXXXXXVAARLVKGR 3727
            FAGVASMNVTLGVPR            TP+ITA+L                  AR+VKGR
Sbjct: 1063 FAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERTDCAN----------TARIVKGR 1112

Query: 3728 IERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKASSVKESILRTPKMKLQAQ 3907
            IE+T L QVAKSIK   TSR AS+++TLD +RI  A L+I A+ VKESIL+T K KL+ +
Sbjct: 1113 IEKTNLGQVAKSIKVVVTSRLASVVITLDMERIQDAHLNIDANIVKESILQTKKAKLKPE 1172

Query: 3908 HINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVVVKGINTIERVIIINEAKK 4087
            HI ILD  KL V     D RSK      F L+ LK+ L  VVVKGI T +RV+I   +K+
Sbjct: 1173 HIKILDVKKLRVVPQDGD-RSK----LHFQLNYLKNLLPSVVVKGIKTADRVVI---SKE 1224

Query: 4088 EDP-GQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQCLGIEAARKKIIDEIQY 4264
            ED   + +K KLLVEGTG   VMG EGVDGC T SNHI EV+  LGIEAAR+ I+ EI+Y
Sbjct: 1225 EDKITKAEKFKLLVEGTGFREVMGVEGVDGCKTVSNHIHEVRDTLGIEAARECIVKEIKY 1284

Query: 4265 TM-SSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVLMLASFEKTADHLFNAA 4441
             M  +HGM ID RHMMLLAD+MT  G +LGI R+G+ +M  SVLMLASFE+TAD LF A+
Sbjct: 1285 VMVDTHGMNIDTRHMMLLADVMTATGHILGINRFGISKMGKSVLMLASFERTADILFQAS 1344

Query: 4442 VNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPVKLTYGPDPII 4582
            V GR D I GVSE IIMGIP+ +GTGM+KV+Q +    L +G  PI+
Sbjct: 1345 VRGRDDSIGGVSESIIMGIPITIGTGMIKVKQRLELPDLPHGASPIL 1391


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score = 1624 bits (4206), Expect = 0.0
 Identities = 851/1445 (58%), Positives = 1032/1445 (71%), Gaps = 26/1445 (1%)
 Frame = +2

Query: 326  MRRDQGSMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 505
            M R +  ++ TK+P+IED G R+I+SI+FS  SG ++++ +EVQV+  + Y++  +PV  
Sbjct: 1    MARPEEKLRCTKEPFIEDAGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNQEMRPVPN 60

Query: 506  GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 685
            GLLD  MG  NK G+C TC  +F  CPGH G+L LALPVFNVG+   I+ ++KCICK CS
Sbjct: 61   GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKGCS 120

Query: 686  RILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKV 865
            R+LL EKDR +FL++MRNPK + L+K+ I+K +  KC        K   C  CG++NG  
Sbjct: 121  RVLLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKC--------KLSRCPWCGFINGVA 172

Query: 866  K--RQQLKIIHERKDIADNGLDEFRSALSHTQANVSLPST--IDAKMVYELLKNMRDEDC 1033
            K  R  L I+H+     D   +E + ALSH +  +S  +   +D   V  L K M DEDC
Sbjct: 173  KKGRAGLIILHDCSKTLDGSTEELKEALSHKKEKLSFSAVHMLDPATVLSLFKRMTDEDC 232

Query: 1034 ELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEMA 1213
            ELL L DRPEKL+VT I VPP  IRPSVFV GG  SNE+ IT  LK I   N+ L+  + 
Sbjct: 233  ELLNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENL- 291

Query: 1214 ETESQ--RFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNL 1387
            +T  Q  +    W+ L+ +V +YINS+A  L  +         G +QRLKGK GRFRGNL
Sbjct: 292  QTGGQFMKCFDCWQHLQLQVVEYINSDAPSLPESQHR------GLVQRLKGKTGRFRGNL 345

Query: 1388 SGKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYP 1567
            SGKR E+TGRTVISPDPNL+ITEVA+PILMAR+LTYPERVS++NIEKLRQ +RNGP K+P
Sbjct: 346  SGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHP 405

Query: 1568 GAKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHR 1747
            GA FI   DG ++ L Y  R+  A  L+YGC+V RHLEDGD+VLFNRQPSLHRMSIMSHR
Sbjct: 406  GANFIIQTDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHR 465

Query: 1748 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEI 1927
            ARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEI
Sbjct: 466  ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEI 525

Query: 1928 LVASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQL 2107
            LVASTQDFLTSSFL+TRKD FYDRS+F+L+CSYLGDAM++IDLPTPALVKP+ELWTGKQL
Sbjct: 526  LVASTQDFLTSSFLVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQL 585

Query: 2108 FSVLLRPHAKMRVYLNLTVAEKSYMKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNK 2287
            FSVL+RP+A  +V+LNLTV EK Y KS+ETMCP DGFVY RNSEL+SGQ+GK TLGNGNK
Sbjct: 586  FSVLVRPNACTKVFLNLTVKEKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGNGNK 645

Query: 2288 DGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDTLNKEKKVTIDME 2467
            DG++S+L+RDY  HAAA+CMNRLAK SAR+IGNHGFSIG++DV+PG+ L+++KK  ID  
Sbjct: 646  DGMFSILVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEG 705

Query: 2468 YGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCMKNLNWRNSPLIM 2647
            Y  C D I  ++ G+L L PGC++A+TLE KI+  LN IREA  N+CM  L+WRNSPLIM
Sbjct: 706  YKECHDLITSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIM 765

Query: 2648 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDPDAKGFVQNSFYT 2827
            SQCGSKGSPINI QM+ CVGQQSVGG RAPNGFIDRTLPHF   +K P AKGFV NSFY 
Sbjct: 766  SQCGSKGSPINISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYN 825

Query: 2828 GLS-----------------ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLS 2956
            GL+                 ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS
Sbjct: 826  GLTATEFFFHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLS 885

Query: 2957 IFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTT 3136
            +FYD TVRNAS  IVQF+YG D MDPA+ME + G PLN ++LFMK  ATCP   Q  L+ 
Sbjct: 886  VFYDQTVRNASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSP 945

Query: 3137 DEIKEIVTETIESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEK--KCP 3310
             EI +I+ + +                      DA S +GC + F   LKDF+E   K  
Sbjct: 946  GEILQILNDKLSEH-------------------DASSDDGCSEKFKQLLKDFLEDRIKLL 986

Query: 3311 SSNLRLKLTKEEHSEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXX 3490
             S  R     E H  +D    E++A+NISGI+  QL VFL TC+SRY SKK         
Sbjct: 987  KSTRRALCLDENHVGKDSSIEESIAANISGISAKQLQVFLDTCLSRYHSKKIEAGASIGA 1046

Query: 3491 XXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXX 3670
                   EPGTQMTLKTFHFAGVASMNVTLGVPR            TP+ITA L      
Sbjct: 1047 IGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAEL------ 1100

Query: 3671 XXXXXXXXXXVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIK 3850
                      ++AR+VKG +E+ +L +VA+ IK    S   +++V LD  RI+   + I 
Sbjct: 1101 ----LSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPNLVVKLDMQRIEDLHMGIS 1156

Query: 3851 ASSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKV 4030
            A SV+ SIL  P++KL+++H+ ++D  KL V+    DK SK ++E    LH LKS L KV
Sbjct: 1157 ADSVQLSILNHPRIKLKSEHVRVIDKAKLRVYPTAIDK-SKLLYE----LHNLKSMLPKV 1211

Query: 4031 VVKGINTIERVIIINEAKKEDPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQ 4210
            +VKGI T+ER +I             K  LLVEGT LLAVMGT GVD   T SNHI+EV 
Sbjct: 1212 IVKGIPTVERAVISQTG--------DKYSLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVN 1263

Query: 4211 QCLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSV 4390
            + LGIEAAR+ IIDEIQYTM+SHGM ID RHMMLLADLMT+KGE+LGITRYG+ +M+ SV
Sbjct: 1264 RTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSV 1323

Query: 4391 LMLASFEKTADHLFNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPV-KLTYG 4567
            LMLASFEKTA+HLFNA+ +GR D+IEGVSECIIMGIPMQLGTG+LKVRQ +  + +  Y 
Sbjct: 1324 LMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQ 1383

Query: 4568 PDPII 4582
            PDPI+
Sbjct: 1384 PDPIL 1388


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score = 1619 bits (4193), Expect = 0.0
 Identities = 854/1444 (59%), Positives = 1041/1444 (72%), Gaps = 25/1444 (1%)
 Frame = +2

Query: 326  MRRDQGSMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 505
            M + +  ++ TK+P+IEDVG R+I+SI+FS LSG++I+K +EVQV+  + Y    KPV  
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYGHDMKPVPN 60

Query: 506  GLLDPHMGPPNKSGKCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICKKCS 685
            GLLDP MG PNK  KC TC   F++CPGH G+L LALPVFNVG+   I+ ++KCICK CS
Sbjct: 61   GLLDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS 120

Query: 686  RILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVNGKV 865
            R+LL EKDR++FL++MRNP+ + L+K+  +K +  KC        K   C RC Y NG V
Sbjct: 121  RVLLFEKDRREFLKKMRNPRADALQKSATMKKVRDKC--------KLSCCPRCDYRNGVV 172

Query: 866  K--RQQLKIIHERKDIADNGLDEFRSALSHTQANVSLPST--IDAKMVYELLKNMRDEDC 1033
            K  R  L ++H+   + D   +E ++AL + +  VS  S   +D   V  L + M DEDC
Sbjct: 173  KKGRAGLIVVHDCSKVLDGHTEELKNALQNKKEKVSANSVRVLDPATVLSLFRRMTDEDC 232

Query: 1034 ELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRSEM- 1210
            ELL L DRPEKL+V+ I VPP  IRPSV V     SNE+ IT  LK I+  N+ L+  + 
Sbjct: 233  ELLNLGDRPEKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLH 292

Query: 1211 AETESQRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFRGNLS 1390
                  +    W+ L+ +V +Y+NS+A  L ++         G +QRLKGK GRFRGNLS
Sbjct: 293  TGGPFTKCFDCWQYLQLQVVEYVNSDAPCLPDSQHR------GLVQRLKGKTGRFRGNLS 346

Query: 1391 GKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQKYPG 1570
            GKR E+TGRTVISPDPNLKITEVA+P+LMAR+LTYPERVS++NIEKLRQ +RNGP KYPG
Sbjct: 347  GKRTEYTGRTVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPG 406

Query: 1571 AKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIMSHRA 1750
            A F+  PDG + SL Y  R+  A  L+ GCIV RHLEDGDVVLFNRQPSLHRMSIMSHRA
Sbjct: 407  ANFVTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRA 466

Query: 1751 RIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 1930
            RIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKNGEIL
Sbjct: 467  RIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 526

Query: 1931 VASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTGKQLF 2110
            VASTQDFLTSSFL+TRKDTFYDRS+F+L+CSYLGDAM++IDLPTPAL+KP+ELWTGKQLF
Sbjct: 527  VASTQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLF 586

Query: 2111 SVLLRPHAKMRVYLNLTVAEKSYMKSK-------------ETMCPKDGFVYIRNSELISG 2251
            SVL+RP+A  RV+LNL V EK Y K K             ETMCP DG+VY RNSEL+SG
Sbjct: 587  SVLVRPNAHTRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSG 646

Query: 2252 QLGKATLGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGDT 2431
            Q+GKATLGNGNKDG+YSVLLRDY  HAAA+CMNRLAK SAR+IGNHGFSIG++DVQPG+ 
Sbjct: 647  QVGKATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEH 706

Query: 2432 LNKEKKVTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIREATANVCM 2611
            LN++KK  ID  Y  C D I  +  G+L L PGC++A+TLE  I+  LN IR    NVCM
Sbjct: 707  LNRQKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCM 766

Query: 2612 KNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHFEKGAKDP 2791
              L+WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAP+GF++RTLPHF   +K P
Sbjct: 767  DTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTP 826

Query: 2792 DAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIFYDN 2971
             AKGFV NSFYTGL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+FYD 
Sbjct: 827  AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQ 886

Query: 2972 TVRNASACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFLTTDEIKE 3151
            TVRNAS  IVQF+YG D MDPA+ME K G+PLN ++LFMK  ATCP      L+ + IK+
Sbjct: 887  TVRNASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQ 946

Query: 3152 IVTETIESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEK-----KCPSS 3316
            +    +E KL +   + +G               GC + F  +L +F++K     KC   
Sbjct: 947  M----LEDKLLQHDTSSDG---------------GCSEEFKKNLTEFLDKRIELMKCTRR 987

Query: 3317 NLRLKLTKEEHSE-EDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXXXXXXXXX 3493
             L L    E+H E +D    E+VA+ ISGI+  QL VFL TC+SRYQSKK          
Sbjct: 988  ALHL---HEDHVEKKDSCVEESVAAIISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAI 1044

Query: 3494 XXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVLXXXXXXX 3673
                  EPGTQMTLKTFHFAGVASMNVTLGVPR            TP+ITA L       
Sbjct: 1045 GAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAARKISTPIITAQL------- 1097

Query: 3674 XXXXXXXXXVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDGAQLSIKA 3853
                     ++AR+VKG +E+ +L +VA +I+    S   +++V LD   I+   + I A
Sbjct: 1098 ---LSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLIVKLDMQLIESLHMGISA 1154

Query: 3854 SSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLKSRLSKVV 4033
             SV+ SIL  PK+KL+++H+ ++D  KL ++    DKR     + Q  LH LKS L KV+
Sbjct: 1155 DSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKR-----KLQLELHNLKSILPKVI 1209

Query: 4034 VKGINTIERVIIINEAKKEDPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSNHILEVQQ 4213
            VKGI T+ERV +I+E K ++  + ++ +LLVEGT LLAVMGT GVD   T SNHI+E  Q
Sbjct: 1210 VKGIPTVERV-VIDEVKVKN--ETERYQLLVEGTNLLAVMGTPGVDATKTKSNHIMETNQ 1266

Query: 4214 CLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQRMRDSVL 4393
             LGIEAAR+ IIDEIQYTM SHGM ID RHMMLLADLMT+KGE+LGITRYG+ +M+ SVL
Sbjct: 1267 TLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILGITRYGIAKMKSSVL 1326

Query: 4394 MLASFEKTADHLFNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPV-KLTYGP 4570
            MLASFEKT++HLFNA+ +GR D+IEGVSECIIMGIPMQLGTG+LKVRQ +  V +  Y P
Sbjct: 1327 MLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHVPEFKYQP 1386

Query: 4571 DPII 4582
            DPI+
Sbjct: 1387 DPIL 1390


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score = 1613 bits (4178), Expect = 0.0
 Identities = 857/1451 (59%), Positives = 1040/1451 (71%), Gaps = 32/1451 (2%)
 Frame = +2

Query: 326  MRRDQGSMQFTKQPYIEDVGPRKIESIQFSTLSGTDIQKLSEVQVYQGKYYDERRKPVGG 505
            M + +  ++ TK+P+IEDVG R+I+SI+FS LSG++I+K +EVQV+  + Y+   KPV  
Sbjct: 1    MAKPEEKLRCTKEPFIEDVGARRIKSIRFSVLSGSEIRKSAEVQVWNSRIYEHDMKPVPN 60

Query: 506  GLLDPHMGPPNKSG---KCETCAANFTNCPGHCGHLTLALPVFNVGYIGTIVVIMKCICK 676
            GLLD  MG  +K     KC TC   F  CPGH G+L LALPVFNVG+   I+ ++KCICK
Sbjct: 61   GLLDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICK 120

Query: 677  KCSRILLKEKDRQDFLRRMRNPKLEHLKKNDILKAIVTKCNSMVGGNQKAVECSRCGYVN 856
             CSR+LL EKDR++FL++MRNP+ + L+K+ I+K +  KC        K   C RC Y N
Sbjct: 121  GCSRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKC--------KLTCCPRCEYKN 172

Query: 857  GKVKRQQ--LKIIHERKDIADNGLDEFRSALSHTQANVSLPST--IDAKMVYELLKNMRD 1024
            G VK+ +  L +IH+   I D   +E ++AL H +  VS  S   +D      L + M D
Sbjct: 173  GVVKKGRVGLIVIHDCSKILDGHTEELKNALQHKKEKVSTSSVRMLDPATALSLFRRMVD 232

Query: 1025 EDCELLYLNDRPEKLMVTSILVPPTAIRPSVFVDGGDQSNENDITERLKFIIQANACLRS 1204
            EDCELL L DRPEKL+VT I VPP  IRPSV V     SNE+ IT  LK I+  N+ L+ 
Sbjct: 233  EDCELLNLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILK- 291

Query: 1205 EMAETES--QRFLSNWELLRDEVAQYINSEARGLSNNSQSNSRPLSGFIQRLKGKQGRFR 1378
            E  +T     +    W+ L+ +V +++NS+A  L  +         G +QRLKGK GRFR
Sbjct: 292  ETLQTGGLFSKCFDCWQQLQLQVVEFVNSDAPCLPESQHR------GLVQRLKGKTGRFR 345

Query: 1379 GNLSGKRVEFTGRTVISPDPNLKITEVAVPILMARILTYPERVSHHNIEKLRQYVRNGPQ 1558
            GNLSGKR E+TGRTVISPDPNL+ITEVA+P+LMAR+LTYPERVS++N+EKLRQ +RNGP 
Sbjct: 346  GNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPY 405

Query: 1559 KYPGAKFIKTPDGHEISLVYEARKHHADQLRYGCIVHRHLEDGDVVLFNRQPSLHRMSIM 1738
            K+PGA FI TPDG ++SL Y  R+ HA  L+ G  V RHLEDGDVVLFNRQPSLHRMSIM
Sbjct: 406  KHPGANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIM 465

Query: 1739 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 1918
            SHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKN
Sbjct: 466  SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 525

Query: 1919 GEILVASTQDFLTSSFLITRKDTFYDRSAFSLMCSYLGDAMDSIDLPTPALVKPVELWTG 2098
            GEILVASTQDFLTSSFL+TRKD FYDRS+F+L+CSY+GDAM++IDLPTPAL+KP+ELWTG
Sbjct: 526  GEILVASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTG 585

Query: 2099 KQLFSVLLRPHAKMRVYLNLTVAEKSYMKSKE----------------TMCPKDGFVYIR 2230
            KQLFSVL+RP+A+ +V+LNL V EK Y K KE                TMCP DG+VY R
Sbjct: 586  KQLFSVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFR 645

Query: 2231 NSELISGQLGKATLGNGNKDGIYSVLLRDYGPHAAATCMNRLAKLSARWIGNHGFSIGIN 2410
            NSEL+SGQ+GKATLGNGNKDGIYSVLLRDY  HAAA+CMNRLAK SAR+IGNHGFSIG++
Sbjct: 646  NSELLSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVD 705

Query: 2411 DVQPGDTLNKEKKVTIDMEYGHCTDYIRRYTSGSLELSPGCDSAETLESKISETLNNIRE 2590
            DVQPG+ LN++KK  ID  Y  C D I  +  G+L L PGC++A+TLE KI+  LN IR 
Sbjct: 706  DVQPGEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRT 765

Query: 2591 ATANVCMKNLNWRNSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFIDRTLPHF 2770
            A  NVCM  L+WRNSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAP+GFIDRTLPHF
Sbjct: 766  AAGNVCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHF 825

Query: 2771 EKGAKDPDAKGFVQNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALED 2950
               +K P AKGFV NSFYTGL+ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LED
Sbjct: 826  PINSKTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLED 885

Query: 2951 LSIFYDNTVRNASACIVQFVYGGDAMDPAQMEEKTGLPLNFERLFMKAKATCPAMDQKFL 3130
            LS+FYD TVRNAS  IVQF+YG D MDPA+ME K G PLN ++LFMK  ATCP      L
Sbjct: 886  LSVFYDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTL 945

Query: 3131 TTDEIKEIVTETIESKLFKSSVTFEGGHPESSTLPDAPSKEGCLQAFAGSLKDFIEK--- 3301
            + D+IK++    +E KL +   + +G               GC + F   LK F+E+   
Sbjct: 946  SPDDIKQM----LEDKLTQHKTSSDG---------------GCSEEFKECLKKFLEERIQ 986

Query: 3302 --KCPSSNLRLKLTKEEH-SEEDRYHLENVASNISGITKGQLMVFLRTCISRYQSKKXXX 3472
              KC    L L    E+H  + D    E +A+NISGI+  QL VFL TC SRY SK    
Sbjct: 987  LLKCTRKALHL---DEKHVGKNDSCIEEIIAANISGISAKQLQVFLDTCFSRYNSKAIEA 1043

Query: 3473 XXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRXXXXXXXXXXXXTPVITAVL 3652
                         EPGTQMTLKTFHFAGVASMNVTLGVPR            TP+IT  L
Sbjct: 1044 GASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITTEL 1103

Query: 3653 XXXXXXXXXXXXXXXXVAARLVKGRIERTLLEQVAKSIKTSQTSRSASILVTLDKDRIDG 3832
                            ++AR+VKG +E+ +L +VA +IK    S   +++V LD   I+ 
Sbjct: 1104 ----------LSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEA 1153

Query: 3833 AQLSIKASSVKESILRTPKMKLQAQHINILDDHKLEVFLNPPDKRSKEVFEPQFALHGLK 4012
              + I A SV+ SIL  PK+KL+++H+ ++D  KL ++    DK      + Q  LH LK
Sbjct: 1154 LHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKS-----KLQLELHNLK 1208

Query: 4013 SRLSKVVVKGINTIERVIIINEAKKEDPGQIKKLKLLVEGTGLLAVMGTEGVDGCNTTSN 4192
            + L KV+VKGI T+ERV +I+E KKE  G+++K  LLVEGT LLAVMGT GVD  NT SN
Sbjct: 1209 AMLPKVIVKGIPTVERV-VIDERKKE--GKLEKYNLLVEGTNLLAVMGTPGVDARNTKSN 1265

Query: 4193 HILEVQQCLGIEAARKKIIDEIQYTMSSHGMTIDIRHMMLLADLMTFKGEVLGITRYGVQ 4372
            HI+E+   LGIEAAR+ IIDEIQYTM SHGM ID+RHMMLLADLMT+KGEVLGITRYG+ 
Sbjct: 1266 HIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEVLGITRYGIA 1325

Query: 4373 RMRDSVLMLASFEKTADHLFNAAVNGRVDKIEGVSECIIMGIPMQLGTGMLKVRQSVPPV 4552
            +M+ SVLMLASFEKT++HLFNA+ +GR D+IEGVSECIIMGIPMQLGTG+LKVRQ +  +
Sbjct: 1326 KMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTGILKVRQRLDHL 1385

Query: 4553 -KLTYGPDPII 4582
             +L Y PDPI+
Sbjct: 1386 PELKYQPDPIL 1396