BLASTX nr result

ID: Mentha27_contig00050254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00050254
         (397 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS72698.1| hypothetical protein M569_02058, partial [Genlise...    62   1e-07
dbj|BAO49705.1| nuclear pore complex protein Nup136a [Nicotiana ...    57   3e-06
dbj|BAO49707.1| nuclear pore complex protein Nup136c [Nicotiana ...    55   8e-06
ref|XP_006345882.1| PREDICTED: uncharacterized protein YMR317W-l...    55   8e-06

>gb|EPS72698.1| hypothetical protein M569_02058, partial [Genlisea aurea]
          Length = 97

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/45 (64%), Positives = 32/45 (71%)
 Frame = +2

Query: 230 DRPAISLRGNGGGSSSWLPKLVVDPASKLISYGARRFFESIFRKR 364
           DRP   LRGN      WL KL+VDPA KLISYGA R F+S+FRKR
Sbjct: 27  DRPPAGLRGNSHKPEGWLKKLLVDPAYKLISYGADRLFDSVFRKR 71


>dbj|BAO49705.1| nuclear pore complex protein Nup136a [Nicotiana benthamiana]
          Length = 1308

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/45 (66%), Positives = 35/45 (77%)
 Frame = +2

Query: 230 DRPAISLRGNGGGSSSWLPKLVVDPASKLISYGARRFFESIFRKR 364
           DRP  +LR     +SSWL KLVVDPASKLI+ GA+RFF SIF+KR
Sbjct: 39  DRPPTTLR-----NSSWLSKLVVDPASKLITSGAQRFFSSIFQKR 78


>dbj|BAO49707.1| nuclear pore complex protein Nup136c [Nicotiana benthamiana]
          Length = 1470

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/47 (61%), Positives = 35/47 (74%)
 Frame = +2

Query: 230 DRPAISLRGNGGGSSSWLPKLVVDPASKLISYGARRFFESIFRKRRL 370
           DRP  +LR     + SWL KLVVDPA+KLI+ GA+RFF S+FRKR L
Sbjct: 40  DRPPTALR-----NPSWLTKLVVDPATKLITSGAQRFFSSLFRKRLL 81


>ref|XP_006345882.1| PREDICTED: uncharacterized protein YMR317W-like [Solanum tuberosum]
          Length = 1347

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = +2

Query: 230 DRPAISLRGNGGGSSSWLPKLVVDPASKLISYGARRFFESIFRKR 364
           DRP  +LR     + SWL KLVVDPA+KLI+ GARRFF SIF+KR
Sbjct: 38  DRPPTALR-----NPSWLTKLVVDPATKLITSGARRFFSSIFQKR 77


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