BLASTX nr result

ID: Mentha27_contig00021093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00021093
         (895 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531081.1| DNA binding protein, putative [Ricinus commu...    62   4e-07

>ref|XP_002531081.1| DNA binding protein, putative [Ricinus communis]
           gi|223529327|gb|EEF31295.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 496

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 18/159 (11%)
 Frame = -3

Query: 812 GSSGEKRSVGSLENQNGQKLVLDSKPTDGVEEKRTVVELGNRIK-SDGATSIQMVQKINI 636
           G+S EK+  G     NG+K   +S+    V +   V EL  RIK  D A+  QMVQK++ 
Sbjct: 80  GTSDEKKVEGQSGYHNGEKFGSNSQQNSVVRDSACVEELARRIKDEDRASGSQMVQKVDA 139

Query: 635 VEKEKANFLGRVQENGSGMLAVNGKRDRSFMANGQNLQVDSRNLGN--GRNPFGENQIKV 462
            +++++   G +         +  K +     NGQ    D+R L    G+  FG +Q +V
Sbjct: 140 TDQKRSEVRGSISIQSQEKEKIKNKNEDQRKINGQKNHFDTRVLEKAFGQTSFGMDQERV 199

Query: 461 D---------------EGKSRNGYKNIVGEGDGSKNEDQ 390
           +               EGK +N  K   G+GD  K +D+
Sbjct: 200 EGIVRLVEKKDTEKQMEGKEKNKQKENDGKGDKHKVKDR 238


Top