BLASTX nr result

ID: Mentha27_contig00019689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00019689
         (336 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    59   9e-07
ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    59   9e-07
gb|AFK46900.1| unknown [Lotus japonicus]                               56   5e-06
ref|XP_004233969.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    56   6e-06
ref|XP_006346947.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    55   8e-06
ref|XP_004232396.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...    55   8e-06

>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 1   ENGETKGNLFPLKGPGWEVVIPTASGGVLSTLNS 102
           E  +  GNL+PLKGPGWEVVIP ++GGVLSTLNS
Sbjct: 795 EKSKVSGNLYPLKGPGWEVVIPASTGGVLSTLNS 828


>ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 822

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 1   ENGETKGNLFPLKGPGWEVVIPTASGGVLSTLNS 102
           E  +  GNL+PLKGPGWEVVIP ++GGVLSTLNS
Sbjct: 789 EKSKVSGNLYPLKGPGWEVVIPASTGGVLSTLNS 822


>gb|AFK46900.1| unknown [Lotus japonicus]
          Length = 146

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +1

Query: 1   ENGETKGNLFPLKGPGWEVVIPTASGGVLSTLN 99
           EN +  G  FPLKGPGWEVVIPTASGG+LSTLN
Sbjct: 113 ENFKAPGISFPLKGPGWEVVIPTASGGMLSTLN 145


>ref|XP_004233969.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Solanum
           lycopersicum]
          Length = 771

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = +1

Query: 10  ETKGNLFPLKGPGWEVVIPTASGGVLSTLNS 102
           E+K N+ PLKGPGW+VV+PTASGG+LSTLNS
Sbjct: 741 ESKVNVVPLKGPGWDVVVPTASGGMLSTLNS 771


>ref|XP_006346947.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Solanum
           tuberosum] gi|565360381|ref|XP_006346948.1| PREDICTED:
           ATP-dependent DNA helicase DDM1-like isoform X2 [Solanum
           tuberosum]
          Length = 754

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/31 (77%), Positives = 29/31 (93%)
 Frame = +1

Query: 10  ETKGNLFPLKGPGWEVVIPTASGGVLSTLNS 102
           E+K N+ PLKGPGW+VV+PTASGG+LSTLNS
Sbjct: 724 ESKVNVAPLKGPGWDVVVPTASGGMLSTLNS 754


>ref|XP_004232396.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Solanum
           lycopersicum]
          Length = 759

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/36 (72%), Positives = 31/36 (86%), Gaps = 2/36 (5%)
 Frame = +1

Query: 1   ENGETKG--NLFPLKGPGWEVVIPTASGGVLSTLNS 102
           E+G T+   N+ PLKGPGWEVVIPTA+GG+LSTLNS
Sbjct: 724 EDGNTESCVNVLPLKGPGWEVVIPTATGGMLSTLNS 759


Top