BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00016482
         (1672 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III s...   494   e-137
ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III s...   488   e-135
emb|CBI22720.3| unnamed protein product [Vitis vinifera]              430   e-118
ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...   427   e-117
ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citr...   403   e-109
gb|EYU39326.1| hypothetical protein MIMGU_mgv1a008161mg [Mimulus...   394   e-107
ref|XP_007038704.1| RNA polymerase III subunit RPC82 family prot...   394   e-107
ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III s...   387   e-105
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s...   377   e-102
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...   377   e-102
gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Mor...   368   5e-99
ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protei...   362   3e-97
emb|CBI26210.3| unnamed protein product [Vitis vinifera]              355   3e-95
ref|XP_002872419.1| RNA polymerase III subunit RPC82 family prot...   353   2e-94
ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prun...   350   8e-94
ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III s...   348   4e-93
ref|XP_002875937.1| RNA polymerase III subunit RPC82 family prot...   346   2e-92
ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phas...   345   3e-92
ref|NP_566914.1| RNA polymerase III subunit RPC82 family protein...   345   3e-92
gb|AAM62793.1| RNA polymerase III subunit-like protein [Arabidop...   345   3e-92

>ref|XP_006363319.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            tuberosum]
          Length = 525

 Score =  494 bits (1271), Expect = e-137
 Identities = 275/528 (52%), Positives = 351/528 (66%), Gaps = 35/528 (6%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            MVS HG  LA +++SS++GDL  KVC+CLLRRGT +L QV+  TEL+R NV NCL VLIH
Sbjct: 1    MVSPHGIKLAVYLISSYFGDLNAKVCDCLLRRGTQTLYQVVSSTELTRTNVKNCLLVLIH 60

Query: 369  QNCVQAFTIEH----------------------------EXXXXXXXXXXXXCRGILYGL 464
             NCVQAF ++                             +            C  I  GL
Sbjct: 61   HNCVQAFALQQPGGFGEEPKVITQYMALFDNIIHKLRFPKFIEIVSEEMGKECEEIFEGL 120

Query: 465  IQHGRLSFDQIIDR--ERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEP 638
            +QHGRL+  +II+R  E  K G+      RD F  L++AR+VERCPAP P L P AAEE 
Sbjct: 121  LQHGRLTLTEIIERYKEASKQGDSSADAARDSFNSLVNARFVERCPAPDPLLEPPAAEET 180

Query: 639  PAKKRGTNSAKIVEQKTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPI---LGR 809
             AKKRG  SAKI  Q T+EQ+ALAAAAPMES+RFL+E  DI                 G 
Sbjct: 181  AAKKRGAKSAKIQAQ-TMEQQALAAAAPMESMRFLVE--DIWNDSVERADKRTTDVKCGM 237

Query: 810  KRKKDALDSD-EDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLD 986
            KRK+  L+S+ +D    K EVLWR NFEEF+RRL HKAC++ VK  +NN+A++VL+A L+
Sbjct: 238  KRKQGDLESNTKDSATGKKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAVVLAATLE 297

Query: 987  LSGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDIDESY 1166
            LS  SET+L  + S   S+N IYDEVIK++GG+GMDLER++ SL  LGC+    +IDE+Y
Sbjct: 298  LSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLMEIDETY 357

Query: 1167 SIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAK 1346
            S+D+K+II++A+ EEVES++LKRYG EAYR+FR LSKA R VETDKIS+ TFVEKK   K
Sbjct: 358  SVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFVEKKDAVK 417

Query: 1347 ILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQD 1526
            ILF+LWKD+YL M+  +  A +   F +WK+++Q   E  LDEMYHA LNLRLRITHE++
Sbjct: 418  ILFKLWKDDYLEMKKVIARAAKQSEFILWKINKQSLWEHILDEMYHAALNLRLRITHEKE 477

Query: 1527 QRKEVLQLPKDKL-EPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
            Q KE+LQ+PKDKL   L +K    R V   LE SLM+LDD+++LFH F
Sbjct: 478  QEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525


>ref|XP_004240730.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc3-like [Solanum
            lycopersicum]
          Length = 525

 Score =  488 bits (1257), Expect = e-135
 Identities = 274/528 (51%), Positives = 351/528 (66%), Gaps = 35/528 (6%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            MVS HG  LA +++SS++G+L  KVC+CLLRRGT +L QV+  TELSR+NV NCL VLIH
Sbjct: 1    MVSPHGIKLAVYLISSYFGELNAKVCDCLLRRGTQTLHQVVSSTELSRKNVKNCLLVLIH 60

Query: 369  QNCVQAFTIEH----------------------------EXXXXXXXXXXXXCRGILYGL 464
             NCVQAF I                              +            C  IL  L
Sbjct: 61   HNCVQAFAIRQPGGFGEEAKIITQYMALFDNIIHKLRFPKFIEIVSEELGKECEEILEWL 120

Query: 465  IQHGRLSFDQIIDRERQ--KTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEP 638
            +QHGRLS  QII + +Q  K G+      +D F RL++AR+VERCPAP P L P A EE 
Sbjct: 121  LQHGRLSLSQIIVKYKQASKQGDSSADAAQDSFNRLVNARFVERCPAPDPLLEPPAEEET 180

Query: 639  PAKKRGTNSAKIVEQKTIEQRALAAAAPMESVRFLMEM---DDIXXXXXXXXXXXPILGR 809
             AKKRG  SAKI  Q T+EQ+ALAAAAPMES+RFL+E    D +              G 
Sbjct: 181  AAKKRGAKSAKIQAQ-TMEQQALAAAAPMESMRFLVENIWNDSVEKADKRTTDVK--CGM 237

Query: 810  KRKKDALDSD-EDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLD 986
            KRK++ L+S+ +D    + EVLWR NFEEF+RRL HKAC++ VK  +NN+A+IVL+A L+
Sbjct: 238  KRKQEDLESNTKDPATGEKEVLWRANFEEFIRRLRHKACVANVKVRVNNDAAIVLAATLE 297

Query: 987  LSGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDIDESY 1166
            LS  SET+L  + S   S+N IYDEVIK++GG+GMDLER++ SL  LGC+    +IDE+Y
Sbjct: 298  LSRHSETKLRIDNSVPQSINAIYDEVIKREGGLGMDLERIRASLDDLGCEAPLMEIDETY 357

Query: 1167 SIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAK 1346
            S+D+K+II++A+ EEVES++LKRYG EAYR+FR LSKA R VETDKIS+ TFVEKK   K
Sbjct: 358  SVDLKNIIEQARIEEVESIVLKRYGREAYRMFRLLSKADRLVETDKISDTTFVEKKDAVK 417

Query: 1347 ILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQD 1526
            ILF+LWKD+YL M+  +  A +   F +WK+++Q   E  LDEMYHA LNLRLR THE++
Sbjct: 418  ILFKLWKDDYLEMKKVIARAPKQSEFILWKINKQSLWEHILDEMYHAALNLRLRTTHEKE 477

Query: 1527 QRKEVLQLPKDKL-EPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
            Q KE+LQ+PKDKL   L +K    R V   LE SLM+LDD+++LFH F
Sbjct: 478  QEKEILQMPKDKLVGELGNKYMRLRKVCIVLESSLMNLDDSLMLFHDF 525


>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  430 bits (1106), Expect = e-118
 Identities = 246/527 (46%), Positives = 336/527 (63%), Gaps = 34/527 (6%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            M + +G  LA H++SS +G+L  KVC+CLLR+GTL+L  VIRFTEL  + V +C+ VLI 
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 369  QNCVQAFTIEHE----------------------------XXXXXXXXXXXXCRGILYGL 464
             NCVQAF I+ E                                        C  IL GL
Sbjct: 61   HNCVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGL 120

Query: 465  IQHGRLSFDQIIDRER--QKTGNIDVQ-VVRDWFKRLLSARYVERCPAPVPSLSPHAAEE 635
            +QHGRL+ +QI+DR +  Q  G   VQ  +R+ F +L+ A +VERCPA  P L+P + EE
Sbjct: 121  LQHGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEE 180

Query: 636  PPAKKRGTNSAKIVEQ-KTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPILGRK 812
             PA+KRG  SAK+VE+ +TIEQRA+AAAAPM++ RF +    I              G K
Sbjct: 181  TPARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSV---IINTGTDVDDSPNVTAGEK 237

Query: 813  RKKDALDSDEDV-LDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDL 989
            RK+DAL+ D++     + +VLWR NFEEF+R L HKACI+ VKT +++ A+IVLSA+L+ 
Sbjct: 238  RKQDALELDKETGASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEA 297

Query: 990  SGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDIDESYS 1169
            +   E ++  E S  LS++ I++ V+K + G  M LERV+ SL QLGC        ESYS
Sbjct: 298  TRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAESYS 357

Query: 1170 IDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAKI 1349
            +D+K+II+ AQN+EVES+ LKRYG +AYRIFR LSK+ R +ETDKIS+ TFVEKK TAKI
Sbjct: 358  VDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTAKI 417

Query: 1350 LFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQ 1529
            L+QLWKDEYL M+    + +R   F +WKV +       L+EMYH+ LNL LR+ +E +Q
Sbjct: 418  LYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELEQ 477

Query: 1530 RKEVLQLPKDK-LEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
             +E++QLP++K +  L ++ +  R VR  LE SLM LDDA++LF+ F
Sbjct: 478  EQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524


>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
            vinifera]
          Length = 511

 Score =  427 bits (1098), Expect = e-117
 Identities = 243/526 (46%), Positives = 335/526 (63%), Gaps = 33/526 (6%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            M + +G  LA H++SS +G+L  KVC+CLLR+GTL+L  VIRFTEL  + V +C+ VLI 
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 369  QNCVQAFTIEHEXXXXXXXXXXXX-----------------------CRGILYGLIQHGR 479
             NCVQAF I+ E                                   C  IL GL+QHGR
Sbjct: 61   HNCVQAFAIQQEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQHGR 120

Query: 480  LSFDQIIDRERQKTGNIDVQ-VVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAKKRG 656
            L+ +QI+DR +       VQ  +R+ F +L+ A +VERCPA  P L+P + EE PA+KRG
Sbjct: 121  LTLEQILDRAKSNQREPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEETPARKRG 180

Query: 657  TNSAKIVEQ-KTIEQRALAAAAPMESVRFLM------EMDDIXXXXXXXXXXXPILGRKR 815
              SAK+VE+ +TIEQRA+AAAAPM++ RF +      ++DD                  R
Sbjct: 181  AKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDD---------------SPNR 225

Query: 816  KKDALDSDEDV-LDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLS 992
            K+DAL+ D++     + +VLWR NFEEF+R L HKACI+ VKT +++ A+IVLSA+L+ +
Sbjct: 226  KQDALELDKETGASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAMLEAT 285

Query: 993  GRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDIDESYSI 1172
               E ++  E S  LS++ I++ V+K + G  M LERV+ SL QLGC        ESYS+
Sbjct: 286  RSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAAESYSV 345

Query: 1173 DIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAKIL 1352
            D+K+II+ AQN+EVES+ LKRYG +AYRIFR LSK+ R +ETDKIS+ TFVEKK TAKIL
Sbjct: 346  DLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDTAKIL 405

Query: 1353 FQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQR 1532
            +QLWKDEYL M+    + +R   F +WKV +       L+EMYH+ LNL LR+ +E +Q 
Sbjct: 406  YQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYELEQE 465

Query: 1533 KEVLQLPKDK-LEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
            +E++QLP++K +  L ++ +  R VR  LE SLM LDDA++LF+ F
Sbjct: 466  QEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 511


>ref|XP_006421933.1| hypothetical protein CICLE_v10004721mg [Citrus clementina]
            gi|568874593|ref|XP_006490399.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC3-like isoform X1 [Citrus
            sinensis] gi|557523806|gb|ESR35173.1| hypothetical
            protein CICLE_v10004721mg [Citrus clementina]
          Length = 527

 Score =  403 bits (1036), Expect = e-109
 Identities = 234/529 (44%), Positives = 324/529 (61%), Gaps = 36/529 (6%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            M++ +G   A HV+++ +GDL  KVCECLLR+G L+   V R+TELS E V N L VLI 
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 369  QNCVQAFTIEH----------------------------EXXXXXXXXXXXXCRGILYGL 464
            QNCVQAFT E                             +            C  ++ GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 465  IQHGRLSFDQIIDRER--QKTGN-IDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEE 635
            ++HGRL+  Q+ DR +  +K GN +D+  +R+   +L++A YVERCPA  P L P + EE
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 636  PPAKKRGTNSAK-IVEQKTIEQRALAAAAPMESVRFLMEMD---DIXXXXXXXXXXXPIL 803
             PA+K+G+ SAK I E +TIEQ+ + AA PME++RF +  +   D+           P  
Sbjct: 181  GPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP-- 238

Query: 804  GRKRKKDALDSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVL 983
            G KRK D L+ DE  +  +  V++R NFE F+RRL HK CI +V+  +++ A+ VLSA+L
Sbjct: 239  GEKRKHDVLELDECGVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAML 298

Query: 984  DLSGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDIDES 1163
              +  +E ++  + S  LS++ IY+EVIK + G  M L+ V+ SL QLG  +      +S
Sbjct: 299  QATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDASSDS 358

Query: 1164 YSIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTA 1343
            YSID + II+ AQNEEVES++ KRYG +AYRIFR LSK+GR +ETDKIS+ TFVEKK   
Sbjct: 359  YSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKDAP 418

Query: 1344 KILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQ 1523
            KIL++LWKD YL M+  +    R   F +WKV++Q   +  LDEM+HA LNL LR+++E 
Sbjct: 419  KILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVSYEL 478

Query: 1524 DQRKEVLQLPKDK-LEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
            D+ KE+L LP DK   PL+D+    R VR  LE S M LDDA++LFH F
Sbjct: 479  DREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 527


>gb|EYU39326.1| hypothetical protein MIMGU_mgv1a008161mg [Mimulus guttatus]
          Length = 383

 Score =  394 bits (1013), Expect = e-107
 Identities = 208/377 (55%), Positives = 274/377 (72%), Gaps = 1/377 (0%)
 Frame = +3

Query: 540  VVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAKKRGTNSAKIVEQKTIEQRALAAAA 719
            V R+ F +L++AR+VE CPAP P L P   +E   KK+       VE+  ++QR LAAAA
Sbjct: 15   VGRESFTKLVNARFVEHCPAPDPHLEPPVVDEKGKKKKTQ-----VEEPPLDQRVLAAAA 69

Query: 720  PMESVRFLMEMDDIXXXXXXXXXXXPILGRKRKKDALDSDEDVLDRKIEVLWRVNFEEFL 899
            PMES+RF +EMDD               G+KRK+D  + D D   +K EVLWRVN EEFL
Sbjct: 70   PMESMRFFLEMDDHSEEKGNETTTSVRSGQKRKQDEGELDAD---KKKEVLWRVNVEEFL 126

Query: 900  RRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETRLVAEKSPYLSVNDIYDEVIKQDG 1079
            RRL HKACI++VK+ IN EA+IVLSA+L+LS +SE+ L AEKS YLS+N IYDEVIK++G
Sbjct: 127  RRLRHKACIAHVKSKINEEAAIVLSAMLELSKQSESGLKAEKSEYLSINAIYDEVIKKEG 186

Query: 1080 GVGMDLERVKTSLYQLGCQTLSTDIDESYSIDIKSIIQKAQNEEVESMILKRYGEEAYRI 1259
            G+GMD ERV++ L QLGC+TLST +DESY IDIK II+ +QNEEVES++++RYG EAYRI
Sbjct: 187  GLGMDFERVRSLLDQLGCETLSTGMDESYCIDIKEIIELSQNEEVESLVMRRYGPEAYRI 246

Query: 1260 FRRLSKAGRYVETDKISEATFVEKKGTAKILFQLWKDEYLHMQGFMPNANRPPAFYVWKV 1439
            +R LSKAGR +ET+KIS++TFVEKK T  IL++LWKD++L M+    +  +   F +W +
Sbjct: 247  YRLLSKAGRLMETEKISDSTFVEKKATIAILYKLWKDDFLQMEHVKTSTAKQSDFRLWTI 306

Query: 1440 DQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDKL-EPLRDKLKVYRIVRTTL 1616
            +++  +++ L+EMYHA LNL+LRI HE+DQ KEV++LPKDKL      K   +  V   L
Sbjct: 307  NKEQLQKQVLNEMYHAALNLKLRIAHEKDQAKEVIKLPKDKLVGESNTKYVRWANVTRIL 366

Query: 1617 ERSLMDLDDAVVLFHHF 1667
            E  LMDLDDA++LFHHF
Sbjct: 367  ESCLMDLDDAIMLFHHF 383


>ref|XP_007038704.1| RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao] gi|508775949|gb|EOY23205.1| RNA
            polymerase III subunit RPC82 family protein, putative
            isoform 1 [Theobroma cacao]
          Length = 523

 Score =  394 bits (1013), Expect = e-107
 Identities = 229/530 (43%), Positives = 312/530 (58%), Gaps = 37/530 (6%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            MV+ HG   A  ++++ +GDL  KVCECLLR+G L+L  ++RFTEL+   V N L VLI 
Sbjct: 1    MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 369  QNCVQAFTIEH----------------------------EXXXXXXXXXXXXCRGILYGL 464
             NCVQAF +E                             +            C  ++  L
Sbjct: 61   HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 465  IQHGRLSFDQIIDRERQKTGNID---VQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEE 635
            + HGRL+  Q+ DR +      D   +  VR+ F +LL+A +VERCPA  P L+    EE
Sbjct: 121  LLHGRLTLKQMSDRAKSAQNEGDDVILDAVREAFIKLLNAHFVERCPAAEPVLTKPTEEE 180

Query: 636  PPAKKRGTNSAKIVEQK-TIEQRALAAAAPMESVRFLMEMDD---IXXXXXXXXXXXPIL 803
              A+KR   SAKI+E K T+EQR L AA P E++RFL+                     +
Sbjct: 181  TSARKRVPKSAKILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNSSSMTV 240

Query: 804  GRKRKKDALDSDED--VLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSA 977
            G+KRK DAL+S+ +    D ++ VLWR NFEEF+RRL HKA I  V+  +++ A IV+SA
Sbjct: 241  GKKRKLDALESETEGEATDEQV-VLWRANFEEFIRRLRHKAFIENVRACLDDGAVIVISA 299

Query: 978  VLDLSGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDID 1157
            +L+ +  +E ++  E S  LS+N IY+EVIK + G  +  +RV+ SL QL C      ++
Sbjct: 300  MLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPFVKAVN 359

Query: 1158 ESYSIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKG 1337
            ESYSID K II+ AQN+EVES++LKRYG +AYR+FR LS   R +ETDKI++  FVEKK 
Sbjct: 360  ESYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDKIADTAFVEKKD 419

Query: 1338 TAKILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITH 1517
            T KIL++LWKD+YLHM+       R   F +WKV++    E  LDEM+HA LNL LR+ H
Sbjct: 420  TTKILYKLWKDDYLHMEKLQLTGARQSQFLLWKVNKNTLWEHVLDEMFHAALNLSLRVAH 479

Query: 1518 EQDQRKEVLQLPKDKLEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
            E +Q KE+L LP+DK      ++   R VR  LE S M LDDA++LFH F
Sbjct: 480  ELEQEKELLNLPQDK------RVNRLRKVRLLLESSQMKLDDAIMLFHDF 523


>ref|XP_006490400.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X2 [Citrus sinensis]
          Length = 512

 Score =  387 bits (995), Expect = e-105
 Identities = 229/529 (43%), Positives = 317/529 (59%), Gaps = 36/529 (6%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            M++ +G   A HV+++ +GDL  KVCECLLR+G L+   V R+TELS E V N L VLI 
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 369  QNCVQAFTIEH----------------------------EXXXXXXXXXXXXCRGILYGL 464
            QNCVQAFT E                             +            C  ++ GL
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 465  IQHGRLSFDQIIDRER--QKTGN-IDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEE 635
            ++HGRL+  Q+ DR +  +K GN +D+  +R+   +L++A YVERCPA  P L P + EE
Sbjct: 121  LEHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEE 180

Query: 636  PPAKKRGTNSAK-IVEQKTIEQRALAAAAPMESVRFLMEMD---DIXXXXXXXXXXXPIL 803
             PA+K+G+ SAK I E +TIEQ+ + AA PME++RF +  +   D+           P  
Sbjct: 181  GPARKKGSKSAKKIGEPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNVTP-- 238

Query: 804  GRKRKKDALDSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVL 983
            G KRK D L+ DE  +  +  V++R NFE F+RRL HK CI +V+  +++ A+ VLSA+L
Sbjct: 239  GEKRKHDVLELDECGVADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSAML 298

Query: 984  DLSGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDIDES 1163
              +  +E ++  + S  LS++ IY+EVIK + G  M L+ V+ SL QL            
Sbjct: 299  QATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL------------ 346

Query: 1164 YSIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTA 1343
               D + II+ AQNEEVES++ KRYG +AYRIFR LSK+GR +ETDKIS+ TFVEKK   
Sbjct: 347  ---DFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKDAP 403

Query: 1344 KILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQ 1523
            KIL++LWKD YL M+  +    R   F +WKV++Q   +  LDEM+HA LNL LR+++E 
Sbjct: 404  KILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVSYEL 463

Query: 1524 DQRKEVLQLPKDK-LEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
            D+ KE+L LP DK   PL+D+    R VR  LE S M LDDA++LFH F
Sbjct: 464  DREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 512


>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  377 bits (968), Expect = e-102
 Identities = 221/522 (42%), Positives = 316/522 (60%), Gaps = 28/522 (5%)
 Frame = +3

Query: 186  VMVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLI 365
            ++++ +G   A H++++ +G+L  KVCE LLR+G L+L  +IRFTEL+   V N L +LI
Sbjct: 1    MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 366  HQNCVQAFT------------------IEHEXXXXXXXXXXXX-------CRGILYGLIQ 470
              NCVQAFT                  I H                    C+ +L GL+Q
Sbjct: 61   QHNCVQAFTDFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEGLLQ 120

Query: 471  HGRLSFDQIIDRERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAKK 650
            +GRLS +Q+++R   +   I   VV D   +LL+A +VERCPAP P+LSP   EEPP +K
Sbjct: 121  NGRLSMEQLVERAESRNHPIS-DVVHDSLFKLLNAHFVERCPAPEPTLSPKV-EEPPPRK 178

Query: 651  RGTNSAKIVE-QKTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPILGRKRKKDA 827
            RG  +AKI E  +T+EQR + AA P+E +RF   M D             I G+KRK D 
Sbjct: 179  RGAKAAKISEVPETLEQRLIEAARPVEVLRF--SMGDTNPEAEKSEHHSQISGQKRKHDD 236

Query: 828  LDSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSET 1007
            L+  +D  D    +LWR N++EF+R L HKACI +V++  ++    VLSA+L+ +  SE 
Sbjct: 237  LEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEK 296

Query: 1008 RLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLST-DIDESYSIDIKS 1184
             +  E +  LS+++IY+EV+K + G  M L+RV+ SL  LGC  +    I    ++D   
Sbjct: 297  IVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISMFTTVDFSM 356

Query: 1185 IIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAKILFQLW 1364
            II++AQ +EVES++LKRYG +AYR+FR LSK G  VET+KIS+++FV+K    KIL++LW
Sbjct: 357  IIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLW 416

Query: 1365 KDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVL 1544
            KDEYL+M+       R     +W+VD+ +  E  LDEMYHA LNL+LR+ HE ++ KE+L
Sbjct: 417  KDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL 476

Query: 1545 QLPKD-KLEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
             LPKD   +PL  K+  +  VR  L  SL+ LDDA++LFH F
Sbjct: 477  SLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 518


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like [Cucumis
            sativus]
          Length = 518

 Score =  377 bits (968), Expect = e-102
 Identities = 221/522 (42%), Positives = 316/522 (60%), Gaps = 28/522 (5%)
 Frame = +3

Query: 186  VMVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLI 365
            ++++ +G   A H++++ +G+L  KVCE LLR+G L+L  +IRFTEL+   V N L +LI
Sbjct: 1    MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 366  HQNCVQAFT------------------IEHEXXXXXXXXXXXX-------CRGILYGLIQ 470
              NCVQAFT                  I H                    C+ +L GL+Q
Sbjct: 61   QHNCVQAFTDFGDAPKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEGLLQ 120

Query: 471  HGRLSFDQIIDRERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAKK 650
            +GRLS +Q+++R   +   I   VV D   +LL+A +VERCPAP P+LSP   EEPP +K
Sbjct: 121  NGRLSMEQLVERAESRNHPIS-DVVHDSLFKLLNAHFVERCPAPEPTLSPKV-EEPPPRK 178

Query: 651  RGTNSAKIVE-QKTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPILGRKRKKDA 827
            RG  +AKI E  +T+EQR + AA P+E +RF   M D             I G+KRK D 
Sbjct: 179  RGAKAAKISEVPETLEQRLIEAARPVEVLRF--SMGDTNPEAEKSEHHSQISGQKRKHDD 236

Query: 828  LDSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSET 1007
            L+  +D  D    +LWR N++EF+R L HKACI +V++  ++    VLSA+L+ +  SE 
Sbjct: 237  LEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEK 296

Query: 1008 RLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLST-DIDESYSIDIKS 1184
             +  E +  LS+++IY+EV+K + G  M L+RV+ SL  LGC  +    I    ++D   
Sbjct: 297  IVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKISMFTTVDFSM 356

Query: 1185 IIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAKILFQLW 1364
            II++AQ +EVES++LKRYG +AYR+FR LSK G  VET+KIS+++FV+K    KIL++LW
Sbjct: 357  IIEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKISDSSFVDKNEAPKILYRLW 416

Query: 1365 KDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVL 1544
            KDEYL+M+       R     +W+VD+ +  E  LDEMYHA LNL+LR+ HE ++ KE+L
Sbjct: 417  KDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL 476

Query: 1545 QLPKD-KLEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
             LPKD   +PL  K+  +  VR  L  SL+ LDDA++LFH F
Sbjct: 477  SLPKDNNNKPLVKKMHHFENVRNLLRSSLVKLDDALMLFHDF 518


>gb|EXC19135.1| DNA-directed RNA polymerase III subunit RPC3 [Morus notabilis]
          Length = 564

 Score =  368 bits (944), Expect = 5e-99
 Identities = 232/573 (40%), Positives = 319/573 (55%), Gaps = 80/573 (13%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            M + +G   A H+++S +G+L   VCE LLR+G L+L Q+IRFTEL+   + N L +LI 
Sbjct: 1    MATPYGIKFAVHLITSHFGNLVANVCENLLRKGPLTLQQLIRFTELTPLQIKNSLLILIQ 60

Query: 369  QNCVQAFTIEH---------------------------EXXXXXXXXXXXXCRGILYGLI 467
             NCVQ F+ E                            +            C  IL GL+
Sbjct: 61   HNCVQPFSSEQIGAGGNEVKVTQYLVLFDNILHRLRFPKFLEIVSEELDKNCGEILEGLL 120

Query: 468  QHGRLSFDQIIDRERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAK 647
            QHGRL+ +QI +R R    N     VR+ F++LL++R+VERCPAP P + P   +   + 
Sbjct: 121  QHGRLTLEQIYERARD---NAVQDAVRESFQKLLNSRFVERCPAPEPFVEPSTIKS--SN 175

Query: 648  KRGTNSAKIVE-QKTIEQRALAAAAPMESVRFLM------EMDDIXXXXXXXXXXXPILG 806
            KRG  SAK+ E  +T EQR LAAAA ++++RF +      E D+              +G
Sbjct: 176  KRGAKSAKLDEVSETEEQRVLAAAASLDTLRFSILTPSGTEFDEDKKDGDSSSSMG--VG 233

Query: 807  RKRKKDALDSDEDVLDRKIEV-LWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVL 983
             KRK  A DSD+     + EV LWR NFEEF R L HKACI  V+  ++  A+ VL A+L
Sbjct: 234  EKRKHGAADSDDAFGSNENEVILWRANFEEFTRYLRHKACIENVRARLDVGAATVLKAML 293

Query: 984  DLSGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDIDES 1163
            D +  +E ++  E S  LS++ I++EV+K + G  + L+RV+ SL QLGC +  TD  ++
Sbjct: 294  DATRSAEKKVKTENSVSLSMDTIFEEVMKSEAGRSLTLDRVRASLVQLGCSSSGTD--DT 351

Query: 1164 YSIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTA 1343
            YSID+K II+ AQ EEVES++L+RYG +AYR+FR LSKAG   ETDKI++ TFVEKK   
Sbjct: 352  YSIDLKQIIELAQKEEVESIVLRRYGRDAYRMFRLLSKAGLLQETDKIADMTFVEKKEAP 411

Query: 1344 KILFQLWKDEYLHMQ--------GFMPNAN------------------------------ 1409
            KIL +LWKDEYLHM+         F  ++N                              
Sbjct: 412  KILGKLWKDEYLHMEVEYFNLLIKFTLSSNMAICDVVDKPRLTLSGMSDLVLMDQNKEIV 471

Query: 1410 ------RPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRKEVLQLPKDK-LE 1568
                  R   FY+WKV++    +  LDEMYHA LNL LR+ HE DQ+KE+L +P +K   
Sbjct: 472  NKFVVDRNTTFYLWKVNKPILWQHVLDEMYHAALNLSLRVIHELDQKKELLTIPPEKRTG 531

Query: 1569 PLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
            PL  + K  +  +  LE SLM LDDA++LF HF
Sbjct: 532  PLEKEFKRLKNAKFFLESSLMKLDDALMLFRHF 564


>ref|XP_002321920.2| RNA polymerase 3 subunit RPC82 family protein [Populus trichocarpa]
            gi|550322612|gb|EEF06047.2| RNA polymerase 3 subunit
            RPC82 family protein [Populus trichocarpa]
          Length = 520

 Score =  362 bits (929), Expect = 3e-97
 Identities = 216/528 (40%), Positives = 309/528 (58%), Gaps = 35/528 (6%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            MVS +G   A H++++ +G L  KVC+CLL++G L L +++R+TELS   V NCL VLI 
Sbjct: 1    MVSQYGIKYAVHIITNHFGPLVAKVCDCLLKKGPLPLREIVRYTELSETLVRNCLLVLIQ 60

Query: 369  QNCVQAFTIEHE----------------------------XXXXXXXXXXXXCRGILYGL 464
             NC+Q F +E E                                        C  ++  L
Sbjct: 61   HNCLQPFLLEEEGGFGEVNKVSSLYMVLFDNVLHRVRFSKFMAIVSQEFDKLCVDLIETL 120

Query: 465  IQHGRLSFDQIIDRERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLS-PHAAEEPP 641
            +QHGRLS +QI D  R ++ +  ++ +++   +L+ ARYVERCP   P L+ P   E  P
Sbjct: 121  LQHGRLSSEQIFDGFRDRSSSGGMEALQENMHKLVMARYVERCPISEPFLALPSEEEAAP 180

Query: 642  AKKRGTNSAK-IVEQKTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPI--LGRK 812
             ++RG  SAK  +E +T+EQR L AA P E +RF  E++                 +G K
Sbjct: 181  VRRRGAKSAKAFLEPETLEQRVLVAAVPPEGMRFSFELNPEIGADRDKVENNSSSNIGDK 240

Query: 813  RKKDALDSDED--VLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLD 986
            RK DAL+SD D  V D+++  LWRVNFEEF+RRL HK CI  V+T +++EA+ V +A+LD
Sbjct: 241  RKLDALESDIDGGVADKQV-ALWRVNFEEFIRRLRHKICIETVRTRLDDEAATVFTAMLD 299

Query: 987  LSGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQ-TLSTDIDES 1163
             S   E ++    S  LS N IY EVIK + G  M L+ V + L  L         +D S
Sbjct: 300  ASRSEEKKIKTASSVPLSENSIYAEVIKSEKGRNMTLDYVISVLVGLSSSPPFVRVVDNS 359

Query: 1164 YSIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTA 1343
            YSID K  I+ AQ +  ES++ K+YG++AYR+FR LSKAG  +ETDKIS++ F+EKK TA
Sbjct: 360  YSIDFKHTIEVAQTD--ESIVYKKYGKDAYRMFRLLSKAGCLLETDKISDSIFLEKKETA 417

Query: 1344 KILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQ 1523
             IL ++W+ +YL M+  +     P  F +WKV+  + RER LD+M+HA LNL LR+ +E 
Sbjct: 418  NILSKMWQGDYLQMEKLIAG---PTQFLLWKVNMINLRERVLDDMFHAALNLSLRVAYEL 474

Query: 1524 DQRKEVLQLPKDKLEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
            +Q+KE+L L  D   P+++K +  + VR  LE S M LDDA+++FH F
Sbjct: 475  EQQKEILHLGVD--GPMKEKYEKLKKVRFLLESSRMKLDDAIMIFHDF 520


>emb|CBI26210.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  355 bits (911), Expect = 3e-95
 Identities = 216/530 (40%), Positives = 304/530 (57%), Gaps = 37/530 (6%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            M   +G  LA H++S+ +GD   KVC+CLLR+GTL+L  ++R  +LS + V   L+VLI 
Sbjct: 1    MTPEYGIKLAVHLISTDFGDHAAKVCDCLLRKGTLALDDIVRTAKLSPQQVKTYLKVLIQ 60

Query: 369  QNCVQAFTIEHEXXXXXXXXXXXX----------------------------CRGILYGL 464
             NCVQAF +EHE                                        C  +    
Sbjct: 61   HNCVQAFAMEHEGGCGEGPVVVTQYMLLFDNILHRMRFPKLLAIVSKELDKECEELFEAF 120

Query: 465  IQHGRLSFDQIIDR--ERQKTGNIDVQ-VVRDWFKRLLSARYVERCPAPVPSLSPHAAEE 635
            ++HG L+  QI+DR    Q  GN  VQ  +R  F +L++A YVERCPAP P L P   E+
Sbjct: 121  LKHGWLTLQQILDRVPSNQNEGNCTVQDALRGSFTKLVNAHYVERCPAPDPFLVPPDEEK 180

Query: 636  PPAKKRGTNSAKIVEQKTI-EQRALAAAAPMESVRFLMEMD---DIXXXXXXXXXXXPIL 803
             PA+K   NSAK VE+  I EQ  +A A P ++  F +  D   DI            ++
Sbjct: 181  TPARKHDANSAKAVEELEIGEQCDIAKATPSKAKGFPVITDTCGDINGDKSIGNPPGVVI 240

Query: 804  GRKRKKDALDSD-EDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAV 980
            G+KRK+DAL  D E     + +V WR N++E +  L HKACI  V+  +++ A+IVLSA+
Sbjct: 241  GKKRKQDALKLDTESGAASEKDVPWRANYKELVCHLRHKACIENVRARLDSGAAIVLSAM 300

Query: 981  LDLSGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTDIDE 1160
            L+ +  +E  +  E S  LS++ I + V++ + G  M LER++ SL QLGC       D 
Sbjct: 301  LEATQSAEKNVKEEISVLLSISTITEAVMQSEAGCSMTLERIRASLVQLGCHPNGVGADR 360

Query: 1161 SYSIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGT 1340
            +Y+ID+K II+ AQN+EVESM+LKRYG EA+RIFR LSK+   +ET KIS+ TF+EKK  
Sbjct: 361  TYNIDLKKIIELAQNDEVESMVLKRYGREAHRIFRLLSKSCCPLETTKISDTTFIEKKEA 420

Query: 1341 AKILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHE 1520
            AKIL++LWKDE LHM+  + N +R   F +WKV +  F    LDEMYHA LNL +     
Sbjct: 421  AKILYKLWKDECLHMEKIVLNESRQSQFMLWKVKKDTFWRHILDEMYHAALNLSI----- 475

Query: 1521 QDQRKEVLQLPKDK-LEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
                 ++++L +DK +  LR++     I+   L+ SLM LDDA++LFH F
Sbjct: 476  -----QIIELRRDKHVGALRERDVRLAIL---LQASLMKLDDALMLFHDF 517


>ref|XP_002872419.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297318256|gb|EFH48678.1| RNA polymerase
            III subunit RPC82 family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 521

 Score =  353 bits (905), Expect = 2e-94
 Identities = 201/527 (38%), Positives = 305/527 (57%), Gaps = 35/527 (6%)
 Frame = +3

Query: 192  VSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTE--LSRENVVNCLRVLI 365
            +S  G   A H+++  +G +  KVCECLLR+G LS   + R  E  ++   V + L +LI
Sbjct: 3    MSEFGIVYAVHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNQVKDILYLLI 62

Query: 366  HQNCVQAFTIE--------------------------HEXXXXXXXXXXXXCRGILYGLI 467
              NCVQAF+IE                          ++            C  +L GL+
Sbjct: 63   QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEELGSECGAVLDGLL 122

Query: 468  QHGRLSFDQIIDRERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAK 647
             +GRL+  Q+I+R+R     I  + +RD  ++L++AR+VER P+P P L     ++ PAK
Sbjct: 123  SNGRLTLGQLIERDRDSGKTIGSEAIRDSLQKLVAARFVERIPSPEPVLGNK--DQEPAK 180

Query: 648  KRGTNSAKIV-EQKTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPILGRKRKKD 824
            KRG  +AKI+ E +T+E+R + AA P++++RF +  ++               G+++++D
Sbjct: 181  KRGAKAAKILKEPETLEERVVEAATPVDAIRFPLIFEEDFNSSLADDDSNITEGKRKQRD 240

Query: 825  ALDSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSE 1004
                  D  D    V+WR NFEEF+ RL HKAC+  VK   +   +IVL A+L++    E
Sbjct: 241  V-----DSSDPSSRVIWRPNFEEFIHRLRHKACVEIVKERRDEGCAIVLRAMLEVGRPQE 295

Query: 1005 TRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQT-----LSTDIDESYS 1169
             ++  + S  +SV  IY+EVIK + G  M  ERV+  L QL   +       T++++SY 
Sbjct: 296  KKVKTDNSAPMSVGSIYEEVIKTEAGRTMLQERVEACLDQLSATSSYLPAFVTEMNDSYI 355

Query: 1170 IDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAKI 1349
            +D KSII  AQ +E+E+++++RYG+EA+R+FR LS+ GR+V+TDKI++A   EKK T +I
Sbjct: 356  VDFKSIISVAQKDEIEAVVMRRYGKEAFRMFRYLSQEGRFVDTDKIADAALTEKKDTPQI 415

Query: 1350 LFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQ 1529
            L ++WKD YLHMQ         P F +WKV++     + LDEMYHA LNL LR+ HE + 
Sbjct: 416  LLKMWKDGYLHMQKLAITGTYVP-FLLWKVNKLIVTRQMLDEMYHASLNLNLRLAHELES 474

Query: 1530 RKEVLQLPKDKLE-PLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
             KE+L LP DKLE PL++++K  R  R  L  ++  LDDA++LFH F
Sbjct: 475  EKELLMLPSDKLEGPLKERVKKVRAKRLLLSSTMFKLDDAIMLFHDF 521


>ref|XP_007219003.1| hypothetical protein PRUPE_ppa004195mg [Prunus persica]
            gi|462415465|gb|EMJ20202.1| hypothetical protein
            PRUPE_ppa004195mg [Prunus persica]
          Length = 524

 Score =  350 bits (899), Expect = 8e-94
 Identities = 215/525 (40%), Positives = 307/525 (58%), Gaps = 33/525 (6%)
 Frame = +3

Query: 192  VSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIHQ 371
            ++ +G   A H+++S +G+L  KVCE LLRRG LSL Q+I FTEL+ + V N L +LI  
Sbjct: 3    LTQYGIKYAVHIITSNFGNLVAKVCEILLRRGHLSLKQLIGFTELTPQQVKNSLLILIQH 62

Query: 372  NCVQAFTIEH----EXXXXXXXXXXXXCRG-------------------ILYGLIQHGRL 482
            NCVQ F+ +     +             RG                   IL  L+++GRL
Sbjct: 63   NCVQPFSFDQSEGPKVTQYIALFDNIIHRGRFAKFLAVVSQELDTDRELILKDLLENGRL 122

Query: 483  SFDQIID---RERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAKKR 653
            +  QII+     + +  + D   V++ F +L++A +VERCPAP P L     +E PAKKR
Sbjct: 123  TLKQIIEGAESSKSQGDSADKDSVQESFLKLVNAHFVERCPAPEPVLGQATKQEGPAKKR 182

Query: 654  GTNSAKIVE-QKTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPILGRKRKKDAL 830
            G  SAK+VE  +TIEQR +AAAAP E++RF + +D              + G K     +
Sbjct: 183  GAKSAKMVEVPETIEQRVIAAAAPPEAIRFSIMIDSEADAPGGKSDNMSV-GEKVGIGIV 241

Query: 831  DSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSETR 1010
             S     D    VLWR NFEEF+R L HKAC+  V+  +++EA++VL A+L  +  +E +
Sbjct: 242  ISIYQGYDEV--VLWRANFEEFIRCLRHKACVENVRARLDDEAAVVLRAMLKATRTAEKK 299

Query: 1011 LVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQL--GCQTLSTDIDESYSIDIKS 1184
            +  E S  LS+N IY+EVI  + G  + + RV+ SL  L    Q    D DESYS D+K 
Sbjct: 300  VKTENSVPLSLNTIYEEVINSEAGRSLTMGRVRDSLSGLCDSSQERDVDEDESYSADLKK 359

Query: 1185 IIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKI---SEATFVEKKGTAKILF 1355
            I++ AQ++EVE ++LKRYG++AY +FR LS AGR +ETDKI   S+ + VEK  T KIL+
Sbjct: 360  ILELAQDDEVELIVLKRYGKDAYTMFRILSLAGRPIETDKISDMSQLSLVEKNETPKILY 419

Query: 1356 QLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQRK 1535
             LWKD+YLHM+  +    R   F VW+VD+    +  LDEM+H  LNL LR+  E+++ K
Sbjct: 420  NLWKDDYLHMERLVVTGARQSQFLVWRVDKPIIWKHVLDEMFHTALNLSLRLACEEERFK 479

Query: 1536 EVLQLPKDK-LEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
            E+  LP  K L  +  + ++YR V   L+ SL+ LDDA++LFH F
Sbjct: 480  EITDLPAHKLLGEMAKQWQLYRNVILVLQASLLKLDDALMLFHDF 524


>ref|XP_004308082.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
            [Fragaria vesca subsp. vesca]
          Length = 534

 Score =  348 bits (893), Expect = 4e-93
 Identities = 213/533 (39%), Positives = 301/533 (56%), Gaps = 41/533 (7%)
 Frame = +3

Query: 192  VSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIHQ 371
            V+  G   A  +++  +G+L  KVCE LL+ G L+L  +IR T L+ + V N L +L+  
Sbjct: 3    VTNSGIQYAVQIITKHFGNLVAKVCETLLKSGPLNLGALIRSTALTPQQVKNSLLILVQH 62

Query: 372  NCVQAFTIEHEXXXXXXXXXXXX----------------------CRGILYGLIQHGRLS 485
            NCVQ FT E +                                  C+ ++ GL++HGRL+
Sbjct: 63   NCVQPFTQESKAGLKVQYIAVYDNILHRLRFAKFLAVVAQELGDECKQLVAGLLEHGRLT 122

Query: 486  FDQIIDRERQKTGNI-----DVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAKK 650
              Q++DR  QK+ +      DV   ++ F RL++AR+VERCPAP P L     +E P K 
Sbjct: 123  QQQLMDRADQKSKSDSTEVQDVSAAQENFVRLVNARFVERCPAPEPLLEEPPEQEGPKKP 182

Query: 651  RGTNSAKIVEQKTIEQRALAAAAPMESVRFLM----EMDDIXXXXXXXXXXXPILGRKRK 818
            RG ++  +   +TIEQR LAAA PME++RFL+    E DD             + G KRK
Sbjct: 183  RGKSAKMVQVPETIEQRVLAAARPMEAIRFLITTESETDDPLQKSENNFSSMGV-GEKRK 241

Query: 819  KDALDSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGR 998
             D LDS+E   + K  +LWR NFE+F+R L HKACI  V+   ++ A++VL AVL  +  
Sbjct: 242  FDDLDSEEHGSNDKGVILWRANFEQFIRCLRHKACIESVRARHDDGAAVVLRAVLKATRN 301

Query: 999  SETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLST------DIDE 1160
             ET++  + S  L ++ IY+EV+  +    ++ E V+  L  L    L T      + D 
Sbjct: 302  QETKVKTDYSGPLKMDAIYEEVMDSEACPSLEQECVRAHLRLLCGAPLVTGEYEDENEDV 361

Query: 1161 SYSIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRL---SKAGRYVETDKISEATFVEK 1331
             YS+D+K II+  QN+EVES++LKRYG++AYRIFR L   S AGR+ ETDKISE   V+K
Sbjct: 362  LYSVDLKKIIELLQNDEVESIVLKRYGKDAYRIFRLLTSQSNAGRFFETDKISEMALVDK 421

Query: 1332 KGTAKILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRI 1511
            K T KIL++LWKD+Y+HM+     A +     VWKV +    E  LDEMYHA  NL  R 
Sbjct: 422  KETPKILYKLWKDDYVHMEKLSLTAAKQSQVMVWKVHKSIVWEHVLDEMYHAAYNLVKRY 481

Query: 1512 THEQDQRKEVLQLPKDK-LEPLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
             HE+++ KEV   PK+K +  L  K   +  VR  +  SL+ LDDA++LFH F
Sbjct: 482  DHEREENKEVTNTPKEKRIGELEKKANRFLAVRKIMASSLLKLDDALMLFHDF 534


>ref|XP_002875937.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297321775|gb|EFH52196.1| RNA polymerase
            III subunit RPC82 family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 521

 Score =  346 bits (887), Expect = 2e-92
 Identities = 198/527 (37%), Positives = 302/527 (57%), Gaps = 35/527 (6%)
 Frame = +3

Query: 192  VSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTE--LSRENVVNCLRVLI 365
            +S  G   A H+++  +G +  KVCECLLR+G LS   + R  E  ++   V + L +LI
Sbjct: 3    MSEFGIVYAVHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNQVKDILYLLI 62

Query: 366  HQNCVQAFTIE--------------------------HEXXXXXXXXXXXXCRGILYGLI 467
              NCVQAF+IE                          ++            C  +L GL+
Sbjct: 63   QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRLVNEELGSECGAVLDGLL 122

Query: 468  QHGRLSFDQIIDRERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAK 647
             +GRL+  Q+I+R+R     I  + +RD  ++L++AR+VER P+P P L     E+ PAK
Sbjct: 123  SNGRLTLGQLIERDRGSGKTIGSEAIRDSLQKLVAARFVERIPSPEPVLGNK--EQEPAK 180

Query: 648  KRGTNSAKIV-EQKTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPILGRKRKKD 824
            KRG  +AKI+ E +T+E+R + AA P++++RF +  ++               G+++++D
Sbjct: 181  KRGAKAAKILKEPETLEERVVEAATPVDAIRFPLIFEEDAHSSLADDDSNITEGKRKQRD 240

Query: 825  ALDSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSE 1004
                  D  D    V+W  N+EEF+ RL HKAC+  VK   +   +IVL A+L++    E
Sbjct: 241  V-----DSSDPSSGVIWHPNYEEFIHRLRHKACVEIVKERRDEGCAIVLRAMLEVGRSQE 295

Query: 1005 TRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQT-----LSTDIDESYS 1169
             ++  + S  +S+  IY+EVIK + G  M  ERV+  L QL   +       T++++SY 
Sbjct: 296  KKVKTDNSAPMSIGSIYEEVIKTEAGRTMLQERVEACLDQLSATSSYLPAFVTEMNDSYI 355

Query: 1170 IDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAKI 1349
            +D KSII  AQ +E+E+++++RYG+EA+R+FR LS+ GR+VETDKI++A   EKK T + 
Sbjct: 356  VDFKSIISVAQKDEIEAVVMRRYGKEAFRMFRYLSQEGRFVETDKIADAALTEKKDTPQF 415

Query: 1350 LFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQDQ 1529
            L ++WKD YLHMQ         P F +WKV++     + LDEMYHA LNL LR+ HE + 
Sbjct: 416  LLKMWKDGYLHMQKLAITGTYVP-FLLWKVNKLIVTRQMLDEMYHASLNLNLRLAHELES 474

Query: 1530 RKEVLQLPKDKLE-PLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
             KE+L LP DKLE PL++++   R  R  L  ++  LDDA++LFH F
Sbjct: 475  EKELLMLPSDKLEGPLKERVIKVRAKRLLLSSTMFKLDDAIMLFHDF 521


>ref|XP_007143425.1| hypothetical protein PHAVU_007G071300g [Phaseolus vulgaris]
            gi|561016615|gb|ESW15419.1| hypothetical protein
            PHAVU_007G071300g [Phaseolus vulgaris]
          Length = 517

 Score =  345 bits (886), Expect = 3e-92
 Identities = 210/535 (39%), Positives = 306/535 (57%), Gaps = 42/535 (7%)
 Frame = +3

Query: 189  MVSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTELSRENVVNCLRVLIH 368
            MV+  G   A H++++ +G+L  KVCE L   G+L+L Q++R++EL+++ V N L VL+ 
Sbjct: 1    MVTQFGIKFAVHLITNHFGNLVAKVCENLFSHGSLTLDQLVRYSELTKDQVKNSLLVLVQ 60

Query: 369  QNCVQAFTIEHEXXXXXXXXXXXX------------------------------CRGILY 458
             NC QAF    E                                          C  +L 
Sbjct: 61   HNCCQAFISAPEDDDDDADRLRVRTQYLVLFDNIIHRLRFPKFLETVSRKLDEECVELLD 120

Query: 459  GLIQHGRLSFDQIIDRERQ-KTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEE 635
            GL++ GRL+  Q++DR  Q K   +D +VVR+   +LL+AR VERCPAP P +S  + +E
Sbjct: 121  GLLRDGRLTLKQMVDRASQGKENAVDTKVVREILSKLLTARLVERCPAPEPVVST-SFKE 179

Query: 636  PPAKKRGTNSAKIVEQ-KTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPILGRK 812
               +KRG  SAKI E  +T+EQR L AA P  ++RF    D                 R 
Sbjct: 180  TTTRKRGAKSAKIFEAPETLEQRVLEAAVPGNAIRFSFTADM----------------RS 223

Query: 813  RKKDALDSDEDVLD-------RKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVL 971
                  +SD+D +        ++ E+LWR NFEEF+R + HKA I  ++T  ++  + VL
Sbjct: 224  NVDGETNSDDDQITSVEQNDAKEEEILWRANFEEFIRHIRHKALIENIRTQHDDGTATVL 283

Query: 972  SAVLDLSGRSETRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQTLSTD 1151
            SAVL+ +   E ++  E S  LS++ I  EV+K D G  M ++R++ SL QLGC      
Sbjct: 284  SAVLEATKTVEKKVKMENSVPLSLDTITAEVMKTDTGRTMTIDRIRASLSQLGCSQRMI- 342

Query: 1152 IDESYSIDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEK 1331
            +D++YSID+K II++AQNEEVES++LKRYG +AYR+FR LSK   + +TD+I+ +T VEK
Sbjct: 343  VDDAYSIDLKKIIERAQNEEVESIVLKRYGRDAYRMFRLLSKDCCFHDTDQIAASTLVEK 402

Query: 1332 KGTAKILFQLWKDEYLHMQGFMPNANRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRI 1511
            K   K+L++LWKD YL+M+  +    +     +WKV++    E  LDEMYHA LNL LR+
Sbjct: 403  KEAPKLLYRLWKDNYLYMEKVIATGVKQTTILMWKVNKPLVWEHVLDEMYHAALNLSLRM 462

Query: 1512 THEQDQRKEVLQLPKDKLE---PLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
              EQ++ +E+L +PKDKL+   PL+ K K    V   L  SLM LD+A++LFH F
Sbjct: 463  AFEQEKDEELLNVPKDKLKEPGPLQKKYKRLLNVWLLLGSSLMKLDEALMLFHDF 517


>ref|NP_566914.1| RNA polymerase III subunit RPC82 family protein [Arabidopsis
            thaliana] gi|20466336|gb|AAM20485.1| RNA polymerase III
            subunit-like protein [Arabidopsis thaliana]
            gi|34098883|gb|AAQ56824.1| At3g49000 [Arabidopsis
            thaliana] gi|332644960|gb|AEE78481.1| RNA polymerase III
            subunit RPC82 family protein [Arabidopsis thaliana]
          Length = 523

 Score =  345 bits (885), Expect = 3e-92
 Identities = 199/528 (37%), Positives = 302/528 (57%), Gaps = 36/528 (6%)
 Frame = +3

Query: 192  VSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTE--LSRENVVNCLRVLI 365
            +S  G   A H+++  +G +  KVCECLLR+G LS   + R  E  ++   V + L +LI
Sbjct: 3    MSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYLLI 62

Query: 366  HQNCVQAFTIE--------------------------HEXXXXXXXXXXXXCRGILYGLI 467
              NCVQAF+IE                          ++            C  +L GL+
Sbjct: 63   QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEELDSKCGAVLDGLL 122

Query: 468  QHGRLSFDQIIDRERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAK 647
             +GRL+  Q I+R+R     I  + +RD  ++L++AR+VER P+P P L     E+ PAK
Sbjct: 123  SNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPEPVLGNK--EKEPAK 180

Query: 648  KRGTNSAKIV-EQKTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPILGRKRKKD 824
            +RG  +AKI+ E +T+E++ + AA P++++RF +  ++               G+++++D
Sbjct: 181  RRGAKAAKILKEPETLEEQVVEAATPVDAIRFPLIFEEDSNSSLADDNSNITEGKRKQRD 240

Query: 825  ALDSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSE 1004
                  D  D    V+WR NFEEF+ RL HKAC+  VK   +   +IVL A+L++    E
Sbjct: 241  V-----DTSDSSSGVIWRPNFEEFIHRLRHKACVEIVKERRDEGCAIVLRAMLEVGRSQE 295

Query: 1005 TRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQT-----LSTDIDESYS 1169
             ++  + S  +SV  IY+EVIK + G  M  ERV+  L QL   +        ++++SY 
Sbjct: 296  KKVKTDNSAPMSVGSIYEEVIKTEAGRTMLQERVEACLDQLSATSSYLPAFVNEVNDSYI 355

Query: 1170 IDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAKI 1349
            +D KSII  AQ +E+E+++++RYG+EA+R+FR LS+ GR+VETDKI++A   EKK T + 
Sbjct: 356  VDYKSIISVAQKDEIEAVVMRRYGKEAFRMFRYLSQEGRFVETDKIADAALTEKKDTPQF 415

Query: 1350 LFQLWKDEYLHMQGFMPNA-NRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQD 1526
            L ++WKD YLHMQ     A      F +WKV++     + LDEMYHA LNL LR+ HE +
Sbjct: 416  LLKMWKDGYLHMQKLAVTAPGMYTPFLLWKVNKLIVTTQMLDEMYHASLNLSLRLAHELE 475

Query: 1527 QRKEVLQLPKDKLE-PLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
              KE+L LP DKLE PL+++LK  +  R  L  ++  LDDA++LFH F
Sbjct: 476  AEKELLLLPLDKLEGPLKERLKKVKAKRLLLSSTMFKLDDAIMLFHDF 523


>gb|AAM62793.1| RNA polymerase III subunit-like protein [Arabidopsis thaliana]
          Length = 521

 Score =  345 bits (885), Expect = 3e-92
 Identities = 199/528 (37%), Positives = 302/528 (57%), Gaps = 36/528 (6%)
 Frame = +3

Query: 192  VSAHGAALAAHVVSSFYGDLCCKVCECLLRRGTLSLVQVIRFTE--LSRENVVNCLRVLI 365
            +S  G   A H+++  +G +  KVCECLLR+G LS   + R  E  ++   V + L +LI
Sbjct: 1    MSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYLLI 60

Query: 366  HQNCVQAFTIE--------------------------HEXXXXXXXXXXXXCRGILYGLI 467
              NCVQAF+IE                          ++            C  +L GL+
Sbjct: 61   QHNCVQAFSIEPPDGSESKAIVQYIVLFNNILHRVRYNKFSRIVNEQLDSKCGAVLDGLL 120

Query: 468  QHGRLSFDQIIDRERQKTGNIDVQVVRDWFKRLLSARYVERCPAPVPSLSPHAAEEPPAK 647
             +GRL+  Q I+R+R     I  + +RD  ++L++AR+VER P+P P L     E+ PAK
Sbjct: 121  SNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPEPVLGNK--EKEPAK 178

Query: 648  KRGTNSAKIV-EQKTIEQRALAAAAPMESVRFLMEMDDIXXXXXXXXXXXPILGRKRKKD 824
            +RG  +AKI+ E +T+E++ + AA P++++RF +  ++               G+++++D
Sbjct: 179  RRGAKAAKILKEPETLEEQVVEAATPVDAIRFPLIFEEDSNSSLADDNSNITEGKRKQRD 238

Query: 825  ALDSDEDVLDRKIEVLWRVNFEEFLRRLLHKACISYVKTTINNEASIVLSAVLDLSGRSE 1004
                  D  D    V+WR NFEEF+ RL HKAC+  VK   +   +IVL A+L++    E
Sbjct: 239  V-----DTSDSSSGVIWRPNFEEFIHRLRHKACVEIVKERRDEGCAIVLRAMLEVGRSQE 293

Query: 1005 TRLVAEKSPYLSVNDIYDEVIKQDGGVGMDLERVKTSLYQLGCQT-----LSTDIDESYS 1169
             ++  + S  +SV  IY+EVIK + G  M  ERV+  L QL   +        ++++SY 
Sbjct: 294  KKVKTDNSAPMSVGSIYEEVIKTEAGRTMLQERVEACLDQLSATSSYLPAFVNEVNDSYI 353

Query: 1170 IDIKSIIQKAQNEEVESMILKRYGEEAYRIFRRLSKAGRYVETDKISEATFVEKKGTAKI 1349
            +D KSII  AQ +E+E+++++RYG+EA+R+FR LS+ GR+VETDKI++A   EKK T + 
Sbjct: 354  VDYKSIISVAQKDEIEAVVMRRYGKEAFRMFRYLSQEGRFVETDKIADAALTEKKDTPQF 413

Query: 1350 LFQLWKDEYLHMQGFMPNA-NRPPAFYVWKVDQQHFRERFLDEMYHAVLNLRLRITHEQD 1526
            L ++WKD YLHMQ     A      F +WKV++     + LDEMYHA LNL LR+ HE +
Sbjct: 414  LLKMWKDGYLHMQKLAVTAPGMYTPFLLWKVNKLIVTTQMLDEMYHASLNLSLRLAHELE 473

Query: 1527 QRKEVLQLPKDKLE-PLRDKLKVYRIVRTTLERSLMDLDDAVVLFHHF 1667
              KE+L LP DKLE PL+++LK  +  R  L  ++  LDDA++LFH F
Sbjct: 474  AEKELLLLPLDKLEGPLKERLKKVKAKRLLLSSTMFKLDDAIMLFHDF 521