BLASTX nr result

ID: Mentha27_contig00006667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00006667
         (587 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD83317.1| Fgenesh protein 73 [Beta vulgaris]                      66   6e-09
ref|NP_190352.1| DNA binding protein [Arabidopsis thaliana] gi|4...    56   6e-06

>gb|ABD83317.1| Fgenesh protein 73 [Beta vulgaris]
          Length = 412

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
 Frame = +3

Query: 258 KTSWHVSEDEALMSAWCFVSENKARGKNQKGLAMWNKIEKLYDAAQAENNEEIGERNQDQ 437
           K  W   EDE L+SA+   S +K  G  QK    W K+ + ++  +  N  E   RN D 
Sbjct: 157 KRVWDQVEDELLVSAFMNTSLDKVSGTYQKKNIFWGKVWEAFEEGRIANPTETAPRNVDM 216

Query: 438 MKGRWKRLFENGSKWVAACREAIRGKRSG--------STFSILDRKNCKFVILH 575
           +KGRW RL     +W A   EA+  K+SG           ++  RKN +F++ H
Sbjct: 217 VKGRWSRLAPRVLRWAAFYDEALARKKSGQNDDDVLREAHALHRRKNGRFILEH 270


>ref|NP_190352.1| DNA binding protein [Arabidopsis thaliana]
           gi|4741185|emb|CAB41851.1| hypothetical protein
           [Arabidopsis thaliana] gi|189303599|gb|ACD85799.1|
           At3g47680 [Arabidopsis thaliana]
           gi|332644797|gb|AEE78318.1| DNA binding protein
           [Arabidopsis thaliana]
          Length = 302

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 30/89 (33%), Positives = 44/89 (49%)
 Frame = +3

Query: 258 KTSWHVSEDEALMSAWCFVSENKARGKNQKGLAMWNKIEKLYDAAQAENNEEIGERNQDQ 437
           +  W   ED  L+SAW   S++   G  QKG A W++I   Y A+   N  E  +R    
Sbjct: 47  RRKWSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAYYGASPKLNGVE--KRETGH 104

Query: 438 MKGRWKRLFENGSKWVAACREAIRGKRSG 524
           +K RW ++ E   K+V +   A + K SG
Sbjct: 105 IKQRWTKINEGVGKFVGSYEAATKQKSSG 133


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