BLASTX nr result
ID: Mentha27_contig00005142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha27_contig00005142
(882 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU44999.1| hypothetical protein MIMGU_mgv1a013841mg [Mimulus... 253 5e-65
gb|EYU44998.1| hypothetical protein MIMGU_mgv1a014911mg [Mimulus... 224 3e-56
ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 224 4e-56
ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 222 2e-55
ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 221 3e-55
ref|XP_002518855.1| structural constituent of ribosome, putative... 220 6e-55
ref|XP_007040587.1| Translation elongation factor EF1B/ribosomal... 219 1e-54
ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 219 1e-54
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin... 217 5e-54
ref|XP_004166401.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 216 1e-53
ref|XP_004143860.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 216 1e-53
ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin... 216 1e-53
gb|EXC14469.1| 30S ribosomal protein S6 alpha [Morus notabilis] 215 2e-53
ref|XP_007160190.1| hypothetical protein PHAVU_002G300600g [Phas... 215 2e-53
gb|AFK44002.1| unknown [Lotus japonicus] 214 3e-53
ref|XP_002297965.2| hypothetical protein POPTR_0001s10930g [Popu... 214 4e-53
ref|XP_006476347.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 211 3e-52
ref|XP_006439300.1| hypothetical protein CICLE_v10022161mg [Citr... 211 3e-52
sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alp... 210 5e-52
ref|XP_004300500.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 210 7e-52
>gb|EYU44999.1| hypothetical protein MIMGU_mgv1a013841mg [Mimulus guttatus]
Length = 209
Score = 253 bits (647), Expect = 5e-65
Identities = 129/168 (76%), Positives = 141/168 (83%), Gaps = 4/168 (2%)
Frame = +1
Query: 208 PIKIRTSEPRARSRTV--TAVKAEFDLAFFERDLEGGDAPP--EIPGAGFPEAEEKEEPQ 375
PIKI RA T KA+FD+AFFERDL G D+PP IP AGFPE E+KEEPQ
Sbjct: 38 PIKIPQMGRRANPARAAFTPAKAQFDIAFFERDLGGSDSPPMPTIPEAGFPEMEDKEEPQ 97
Query: 376 CPPGLRKYETMVVLRPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKN 555
CPPGLRKYE+MVVLRPDMSEDERL FTQKYEELLVAGGGMYVEVFNRGVIPLAY I+KKN
Sbjct: 98 CPPGLRKYESMVVLRPDMSEDERLAFTQKYEELLVAGGGMYVEVFNRGVIPLAYGIRKKN 157
Query: 556 KAGETNTYMDGIFLLFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
KAGE+NTY+DGI+LLFTYFT P SI +L +TLLADDEVIRSS+FKIRK
Sbjct: 158 KAGESNTYLDGIYLLFTYFTKPDSITVLEDTLLADDEVIRSSTFKIRK 205
>gb|EYU44998.1| hypothetical protein MIMGU_mgv1a014911mg [Mimulus guttatus]
Length = 174
Score = 224 bits (571), Expect = 3e-56
Identities = 111/146 (76%), Positives = 124/146 (84%), Gaps = 2/146 (1%)
Frame = +1
Query: 268 AEFDLAFFERDLEGGDAPP--EIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMSEDE 441
A FD++FFER+L GG APP EIP GFPE +K EPQCPPGLR YETMVVLRPDMSEDE
Sbjct: 22 ALFDISFFERELGGGAAPPTPEIPETGFPEMGDKVEPQCPPGLRTYETMVVLRPDMSEDE 81
Query: 442 RLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYFTNP 621
RL FT KY +LLVAGGG V VFN+GVIPLAY I+KKN+AGE+NTY+DGI+LLFTYFT P
Sbjct: 82 RLNFTHKYNQLLVAGGGTNVTVFNKGVIPLAYGIRKKNRAGESNTYLDGIYLLFTYFTKP 141
Query: 622 QSIELLSETLLADDEVIRSSSFKIRK 699
SI +L ETLLADDEVIRSS+FKIRK
Sbjct: 142 DSITVLEETLLADDEVIRSSTFKIRK 167
>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
vinifera]
Length = 199
Score = 224 bits (570), Expect = 4e-56
Identities = 110/155 (70%), Positives = 125/155 (80%)
Frame = +1
Query: 235 RARSRTVTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVV 414
RA ++ A+ +F +FFE D P PG G E+K+EPQCPPGLR+YETM V
Sbjct: 42 RAPGLSIRALTLDFSGSFFEGGFGSDDDPNSPPGPGIAAVEDKDEPQCPPGLRQYETMAV 101
Query: 415 LRPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIF 594
LRPDMSEDERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGE+NTY+DGI+
Sbjct: 102 LRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIY 161
Query: 595 LLFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
LLFTYFT P+S+E+L TL ADD+VIRSSSFKIRK
Sbjct: 162 LLFTYFTKPESMEVLEATLTADDDVIRSSSFKIRK 196
>ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cicer arietinum]
Length = 196
Score = 222 bits (565), Expect = 2e-55
Identities = 111/150 (74%), Positives = 122/150 (81%)
Frame = +1
Query: 250 TVTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDM 429
+V A +F +FFE + GD P PG GF EEKEEPQCPPGLR+YETM VLRPDM
Sbjct: 45 SVNAQTLDFTGSFFEGGIGSGD-DPITPGTGFAAVEEKEEPQCPPGLRQYETMAVLRPDM 103
Query: 430 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 609
SEDERL FTQKYEELLVAGGGMY+EVFNRGVIPLAYSIKKKNK GE+NTYMDGI+LLFTY
Sbjct: 104 SEDERLAFTQKYEELLVAGGGMYIEVFNRGVIPLAYSIKKKNKEGESNTYMDGIYLLFTY 163
Query: 610 FTNPQSIELLSETLLADDEVIRSSSFKIRK 699
FT P+SI L TLLADD V+RS+S KIRK
Sbjct: 164 FTKPESITALEATLLADDNVVRSTSVKIRK 193
>ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum lycopersicum]
Length = 196
Score = 221 bits (563), Expect = 3e-55
Identities = 110/145 (75%), Positives = 122/145 (84%), Gaps = 2/145 (1%)
Frame = +1
Query: 271 EFDLAFFERDLEGGDA--PPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMSEDER 444
EF +FFE GG+A PP P +G E+KEEPQCPPGLR YETMVVLRPDMSEDER
Sbjct: 49 EFSGSFFEGGFGGGNADEPPTTPWSGISAVEDKEEPQCPPGLRPYETMVVLRPDMSEDER 108
Query: 445 LTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYFTNPQ 624
L TQKYEELLVAGGGMYVEVFNRGVIPLAYSI++KNKAGETNTY+DGI+LLFTYFT P+
Sbjct: 109 LALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPE 168
Query: 625 SIELLSETLLADDEVIRSSSFKIRK 699
SI L TL+ADD+VIRSS+FKIRK
Sbjct: 169 SIVALEATLVADDDVIRSSTFKIRK 193
>ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541842|gb|EEF43388.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 205
Score = 220 bits (560), Expect = 6e-55
Identities = 109/154 (70%), Positives = 125/154 (81%), Gaps = 1/154 (0%)
Frame = +1
Query: 241 RSRTVTAVKAEFDLAFFERDLEGGDA-PPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVL 417
RS T+ + +F +F+E G + PP + G+G E+KE PQCPPGLR+YETM VL
Sbjct: 49 RSLTIKSQALDFSGSFYEGSGFGSEEDPPTLTGSGMTAVEDKEPPQCPPGLRQYETMAVL 108
Query: 418 RPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFL 597
RPDMSEDERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTY+DGI+L
Sbjct: 109 RPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYL 168
Query: 598 LFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
LFTYFT P+SIE+L TL DD++IRSSSFKIRK
Sbjct: 169 LFTYFTKPESIEMLEATLNTDDDIIRSSSFKIRK 202
>ref|XP_007040587.1| Translation elongation factor EF1B/ribosomal protein S6 family
protein [Theobroma cacao] gi|508777832|gb|EOY25088.1|
Translation elongation factor EF1B/ribosomal protein S6
family protein [Theobroma cacao]
Length = 337
Score = 219 bits (558), Expect = 1e-54
Identities = 114/165 (69%), Positives = 127/165 (76%), Gaps = 3/165 (1%)
Frame = +1
Query: 214 KIRTSEPRARSRTVTAVKA---EFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPP 384
K TS R TVT VKA +F +FFE D PP PG+G E+KEEPQCPP
Sbjct: 171 KSLTSLKRGNFTTVT-VKARTLDFSGSFFEGGFGSDDDPPSQPGSGITALEDKEEPQCPP 229
Query: 385 GLRKYETMVVLRPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAG 564
GLR+YETM+VLRPDMSEDERL TQKYEELLVAGGGMYVEVFNRGV+PLAYSIKKKNKAG
Sbjct: 230 GLRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVVPLAYSIKKKNKAG 289
Query: 565 ETNTYMDGIFLLFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
ETNTY+DGI+LLFTYF P+S+ L L DD+VIRSSSFK+RK
Sbjct: 290 ETNTYLDGIYLLFTYFMKPESMATLEVALNTDDDVIRSSSFKVRK 334
>ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum tuberosum]
Length = 196
Score = 219 bits (557), Expect = 1e-54
Identities = 109/145 (75%), Positives = 121/145 (83%), Gaps = 2/145 (1%)
Frame = +1
Query: 271 EFDLAFFERDLEGGDA--PPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDMSEDER 444
EF +FFE GG+A PP P +G E+KEEPQCPPGLR YETMVVLRPDMSEDER
Sbjct: 49 EFSGSFFEGGFGGGNADEPPTTPWSGISAVEDKEEPQCPPGLRPYETMVVLRPDMSEDER 108
Query: 445 LTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTYFTNPQ 624
L TQKYEELLVAGGGMYVEVFNRGVIPLAYSI++KNKAGETNTY+DGI+LLFTYFT P+
Sbjct: 109 LALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPE 168
Query: 625 SIELLSETLLADDEVIRSSSFKIRK 699
SI L TL+ DD+VIRSS+FKIRK
Sbjct: 169 SIVPLEATLVTDDDVIRSSTFKIRK 193
>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
gi|255628961|gb|ACU14825.1| unknown [Glycine max]
Length = 214
Score = 217 bits (552), Expect = 5e-54
Identities = 108/150 (72%), Positives = 119/150 (79%)
Frame = +1
Query: 250 TVTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDM 429
++ A +F +FFE D P G GF EEKEEPQCPPGLR+YETM+VLRPDM
Sbjct: 62 SIRAQTLDFSDSFFEGGFGSEDVPSSPGGPGFTAVEEKEEPQCPPGLRQYETMMVLRPDM 121
Query: 430 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 609
SEDERL TQKYEE+LVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTY+DGI+LLFTY
Sbjct: 122 SEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTY 181
Query: 610 FTNPQSIELLSETLLADDEVIRSSSFKIRK 699
FT P+SI L ET+L DD VIRS S KIRK
Sbjct: 182 FTKPESITPLEETMLTDDNVIRSMSSKIRK 211
>ref|XP_004166401.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cucumis sativus]
Length = 222
Score = 216 bits (549), Expect = 1e-53
Identities = 109/148 (73%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Frame = +1
Query: 250 TVTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEA-EEKEEPQCPPGLRKYETMVVLRPD 426
+V A EF +FFE L D PP PG GF A EEKEEPQCPPGLRKYE+MVVLRPD
Sbjct: 57 SVKAQTLEFSGSFFEGGLGSQDEPPAPPGTGFATALEEKEEPQCPPGLRKYESMVVLRPD 116
Query: 427 MSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFT 606
MSEDERL FT+KYEELLVAGG MYVEVFN+G+IPLAYSIKKKNKAGETNTY+DGI LLFT
Sbjct: 117 MSEDERLAFTEKYEELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFT 176
Query: 607 YFTNPQSIELLSETLLADDEVIRSSSFK 690
YFT P+S+ +L TL ADD+V+RS SFK
Sbjct: 177 YFTKPESMAVLEATLQADDDVVRSMSFK 204
>ref|XP_004143860.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cucumis sativus]
Length = 222
Score = 216 bits (549), Expect = 1e-53
Identities = 109/148 (73%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Frame = +1
Query: 250 TVTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEA-EEKEEPQCPPGLRKYETMVVLRPD 426
+V A EF +FFE L D PP PG GF A EEKEEPQCPPGLRKYE+MVVLRPD
Sbjct: 57 SVKAQTLEFSGSFFEGGLGSQDEPPAPPGTGFATALEEKEEPQCPPGLRKYESMVVLRPD 116
Query: 427 MSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFT 606
MSEDERL FT+KYEELLVAGG MYVEVFN+G+IPLAYSIKKKNKAGETNTY+DGI LLFT
Sbjct: 117 MSEDERLAFTEKYEELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFT 176
Query: 607 YFTNPQSIELLSETLLADDEVIRSSSFK 690
YFT P+S+ +L TL ADD+V+RS SFK
Sbjct: 177 YFTKPESMAVLEATLQADDDVVRSMSFK 204
>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
gi|255625673|gb|ACU13181.1| unknown [Glycine max]
Length = 214
Score = 216 bits (549), Expect = 1e-53
Identities = 108/150 (72%), Positives = 119/150 (79%)
Frame = +1
Query: 250 TVTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDM 429
++ A +F +FFE D P G GF EEKEEPQCPPGLR+YETM+VLRPDM
Sbjct: 62 SIRAQTLDFSDSFFEGGFGSEDDPSSPGGPGFTGVEEKEEPQCPPGLRQYETMMVLRPDM 121
Query: 430 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 609
SEDERL TQKYEE+LVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTY+DGI+LLFTY
Sbjct: 122 SEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFTY 181
Query: 610 FTNPQSIELLSETLLADDEVIRSSSFKIRK 699
FT P+SI L ET+L DD VIRS S KIRK
Sbjct: 182 FTKPESITPLEETMLTDDNVIRSMSSKIRK 211
>gb|EXC14469.1| 30S ribosomal protein S6 alpha [Morus notabilis]
Length = 209
Score = 215 bits (548), Expect = 2e-53
Identities = 107/159 (67%), Positives = 124/159 (77%)
Frame = +1
Query: 223 TSEPRARSRTVTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYE 402
+++ R V A +F +FFE + + PP PG G E+KEEP+CPPGLR++E
Sbjct: 48 SNKTRTGLSVVKAQTLDFSGSFFEGGIVSDEDPPSPPGPGLAAVEDKEEPECPPGLRQFE 107
Query: 403 TMVVLRPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYM 582
TMVVLRPDMSE+ERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKN+AGETNTY+
Sbjct: 108 TMVVLRPDMSEEERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNRAGETNTYL 167
Query: 583 DGIFLLFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
DGI+LLFTYFT P+SI L E L ADD+VIRS S KIRK
Sbjct: 168 DGIYLLFTYFTKPESIGPLEEMLKADDDVIRSMSLKIRK 206
>ref|XP_007160190.1| hypothetical protein PHAVU_002G300600g [Phaseolus vulgaris]
gi|561033605|gb|ESW32184.1| hypothetical protein
PHAVU_002G300600g [Phaseolus vulgaris]
Length = 214
Score = 215 bits (547), Expect = 2e-53
Identities = 104/150 (69%), Positives = 120/150 (80%)
Frame = +1
Query: 250 TVTAVKAEFDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDM 429
++TA +F +FFE D P G GF EEKEEP CPPGLR+YETM+VLRPDM
Sbjct: 62 SITAQTLDFSDSFFEGGFGSEDDPNSPGGTGFTAVEEKEEPPCPPGLRQYETMMVLRPDM 121
Query: 430 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 609
+EDERL TQKYEE+LVAGGGMYVEVFNRGVIPLAY+IKKKNKAGETNTY+DGI+LLFTY
Sbjct: 122 TEDERLALTQKYEEILVAGGGMYVEVFNRGVIPLAYAIKKKNKAGETNTYLDGIYLLFTY 181
Query: 610 FTNPQSIELLSETLLADDEVIRSSSFKIRK 699
FT P+S++ L ET+L DD V RS SFK+RK
Sbjct: 182 FTKPESVKPLEETVLTDDNVFRSISFKVRK 211
>gb|AFK44002.1| unknown [Lotus japonicus]
Length = 209
Score = 214 bits (546), Expect = 3e-53
Identities = 110/156 (70%), Positives = 127/156 (81%), Gaps = 3/156 (1%)
Frame = +1
Query: 241 RSRTVTAVKAE---FDLAFFERDLEGGDAPPEIPGAGFPEAEEKEEPQCPPGLRKYETMV 411
++ +V +VKA+ F +FFE L G + G G EEKEEPQCPPGLR+YETM
Sbjct: 52 KNDSVLSVKAQTLDFTDSFFEGGL-GSEDDLNSSGTGLTATEEKEEPQCPPGLRQYETMA 110
Query: 412 VLRPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGI 591
VLRPDMSEDERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTY+DGI
Sbjct: 111 VLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGI 170
Query: 592 FLLFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
+LL+TYFT P+SI L ETLLADD+V+RS++FKI+K
Sbjct: 171 YLLYTYFTKPESIVALEETLLADDDVLRSTTFKIKK 206
>ref|XP_002297965.2| hypothetical protein POPTR_0001s10930g [Populus trichocarpa]
gi|550346990|gb|EEE82770.2| hypothetical protein
POPTR_0001s10930g [Populus trichocarpa]
Length = 240
Score = 214 bits (545), Expect = 4e-53
Identities = 111/159 (69%), Positives = 126/159 (79%), Gaps = 4/159 (2%)
Frame = +1
Query: 235 RARSRTVTAVKAE---FDLAFFERDLEGGDAPPEIPGAGFPEA-EEKEEPQCPPGLRKYE 402
RA S TAVKA+ F +F+E + D P G+G A EEKE P CPPGLR+YE
Sbjct: 79 RAHSNPTTAVKAQTVDFAGSFYEGGIGSDDEPDSPIGSGTMTAVEEKETPPCPPGLRQYE 138
Query: 403 TMVVLRPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYM 582
TM VLRPDMSEDERL TQKYEELLVAGGGMYVEVFNRGV+PLAYSIKKKNKAGE+NTY+
Sbjct: 139 TMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVVPLAYSIKKKNKAGESNTYL 198
Query: 583 DGIFLLFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
DGI+LLFTYFT P+SI +L +TL DD+VIRSSSFK+RK
Sbjct: 199 DGIYLLFTYFTKPESIGILEQTLNTDDDVIRSSSFKVRK 237
>ref|XP_006476347.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Citrus sinensis]
Length = 219
Score = 211 bits (537), Expect = 3e-52
Identities = 109/156 (69%), Positives = 124/156 (79%), Gaps = 4/156 (2%)
Frame = +1
Query: 244 SRTVTAVKAEFDLAFFERDLEGGDAPP-EIPGAGFPEA---EEKEEPQCPPGLRKYETMV 411
S TV A +F +FFE G D P +P A E+KEEPQCPPGLR+YETM+
Sbjct: 59 SLTVKAQTLDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMM 118
Query: 412 VLRPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGI 591
VLRPDMSEDERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSI+K+NKAGE+NTY+DGI
Sbjct: 119 VLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGESNTYLDGI 178
Query: 592 FLLFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
+LLFTYFT P+SIE L T+ ADD+VIRSSSFK+RK
Sbjct: 179 YLLFTYFTKPESIEALERTMKADDDVIRSSSFKVRK 214
>ref|XP_006439300.1| hypothetical protein CICLE_v10022161mg [Citrus clementina]
gi|557541562|gb|ESR52540.1| hypothetical protein
CICLE_v10022161mg [Citrus clementina]
Length = 219
Score = 211 bits (537), Expect = 3e-52
Identities = 109/156 (69%), Positives = 124/156 (79%), Gaps = 4/156 (2%)
Frame = +1
Query: 244 SRTVTAVKAEFDLAFFERDLEGGDAPP-EIPGAGFPEA---EEKEEPQCPPGLRKYETMV 411
S TV A +F +FFE G D P +P A E+KEEPQCPPGLR+YETM+
Sbjct: 59 SLTVKAQTIDFSGSFFEGGGFGSDDDPTSVPPGSVGTATAIEDKEEPQCPPGLRQYETMM 118
Query: 412 VLRPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGI 591
VLRPDMSEDERL TQKYEELLVAGGGMYVEVFNRGVIPLAYSI+K+NKAGE+NTY+DGI
Sbjct: 119 VLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKRNKAGESNTYLDGI 178
Query: 592 FLLFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
+LLFTYFT P+SIE L T+ ADD+VIRSSSFK+RK
Sbjct: 179 YLLFTYFTKPESIEALERTMKADDDVIRSSSFKVRK 214
>sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6 beta,
chloroplastic; Contains: RecName: Full=30S ribosomal
protein S6 gamma, chloroplastic; Contains: RecName:
Full=30S ribosomal protein S6 delta, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6
epsilon, chloroplastic; Flags: Precursor
gi|188036207|pdb|3BBN|F Chain F, Homology Model For The
Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome.
gi|7582401|gb|AAF64311.1|AF250383_1 plastid ribosomal
protein S6 precursor, partial [Spinacia oleracea]
Length = 168
Score = 210 bits (535), Expect = 5e-52
Identities = 108/150 (72%), Positives = 119/150 (79%), Gaps = 1/150 (0%)
Frame = +1
Query: 253 VTAVKAEFDLAFFERDLEGGDA-PPEIPGAGFPEAEEKEEPQCPPGLRKYETMVVLRPDM 429
V A+ +F +FFE G D PP P AG EEK EPQCPPGLR+YETM VLRPDM
Sbjct: 17 VKAIALDFSGSFFEGGFGGLDEDPPSTPPAGLA-VEEKPEPQCPPGLRQYETMAVLRPDM 75
Query: 430 SEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGIFLLFTY 609
+EDERLT TQKYEELLVAGG MYVEVFNRGVIPLAYSIK+KNKAGETN Y+DGI+LLFTY
Sbjct: 76 TEDERLTLTQKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYLLFTY 135
Query: 610 FTNPQSIELLSETLLADDEVIRSSSFKIRK 699
FT P+SI L L+ DD+VIRSSSFKIRK
Sbjct: 136 FTKPESISPLEAALVTDDDVIRSSSFKIRK 165
>ref|XP_004300500.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 201
Score = 210 bits (534), Expect = 7e-52
Identities = 107/156 (68%), Positives = 118/156 (75%), Gaps = 1/156 (0%)
Frame = +1
Query: 235 RARSRTVTAVKAEFDLAFFERDLEGGDAPPEIP-GAGFPEAEEKEEPQCPPGLRKYETMV 411
R R V EF +FFE D P P G G E+KEEP CPPGLR+YETM
Sbjct: 43 RTRPGRVNVQSLEFSGSFFEGGGFQSDDDPNSPNGPGMTAVEDKEEPPCPPGLRQYETMA 102
Query: 412 VLRPDMSEDERLTFTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYMDGI 591
VLRPDMSEDERL TQKYEELL+AGGGMYVEVFNRGVIPLAYSI+KKNKAGE+NTY+DGI
Sbjct: 103 VLRPDMSEDERLALTQKYEELLIAGGGMYVEVFNRGVIPLAYSIQKKNKAGESNTYLDGI 162
Query: 592 FLLFTYFTNPQSIELLSETLLADDEVIRSSSFKIRK 699
+LLFTYFT P+S+E L + L ADD VIRS SFKIRK
Sbjct: 163 YLLFTYFTKPESLEFLEQNLKADDNVIRSLSFKIRK 198