BLASTX nr result

ID: Mentha27_contig00002563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha27_contig00002563
         (302 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001152559.1| membrane protein [Zea mays] gi|195657471|gb|...    59   9e-07
ref|XP_004239222.1| PREDICTED: stress-associated endoplasmic ret...    58   1e-06
ref|XP_004239220.1| PREDICTED: stress-associated endoplasmic ret...    58   1e-06
ref|XP_007223936.1| hypothetical protein PRUPE_ppa014280mg [Prun...    58   2e-06
gb|ABA99116.2| Ribosome associated membrane protein RAMP4 contai...    57   3e-06
gb|AAW23953.1| predicted membrane protein 3 [Brassica juncea]          56   5e-06
gb|AAT08724.1| unknown [Hyacinthus orientalis]                         55   8e-06

>ref|NP_001152559.1| membrane protein [Zea mays] gi|195657471|gb|ACG48203.1| membrane
           protein [Zea mays] gi|413941997|gb|AFW74646.1| membrane
           protein [Zea mays]
          Length = 67

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/31 (80%), Positives = 29/31 (93%)
 Frame = +1

Query: 1   PETTAKKANNYPVGPILLGFFIFVVIGSCNN 93
           PETT KK+N+YPVGPI+LGFFIFVVIGSC +
Sbjct: 26  PETTVKKSNDYPVGPIVLGFFIFVVIGSCKH 56


>ref|XP_004239222.1| PREDICTED: stress-associated endoplasmic reticulum protein 2-like
           isoform 3 [Solanum lycopersicum]
          Length = 73

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +1

Query: 1   PETTAKKANNYPVGPILLGFFIFVVIGSCNNYFSSHLISSH 123
           PETTAKK + YPVGPILLGFF+FVVIGSC  +   HL  S+
Sbjct: 26  PETTAKKGSQYPVGPILLGFFVFVVIGSCKIFV--HLFVSN 64


>ref|XP_004239220.1| PREDICTED: stress-associated endoplasmic reticulum protein 2-like
           isoform 1 [Solanum lycopersicum]
          Length = 93

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +1

Query: 1   PETTAKKANNYPVGPILLGFFIFVVIGSCNNYFSSHLISSH 123
           PETTAKK + YPVGPILLGFF+FVVIGSC  +   HL  S+
Sbjct: 46  PETTAKKGSQYPVGPILLGFFVFVVIGSCKIFV--HLFVSN 84


>ref|XP_007223936.1| hypothetical protein PRUPE_ppa014280mg [Prunus persica]
           gi|462420872|gb|EMJ25135.1| hypothetical protein
           PRUPE_ppa014280mg [Prunus persica]
          Length = 76

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   PETTAKKANNYPVGPILLGFFIFVVIGSC 87
           PETTAKK  +YPVGPILLGFF+FVVIGSC
Sbjct: 26  PETTAKKGKDYPVGPILLGFFVFVVIGSC 54


>gb|ABA99116.2| Ribosome associated membrane protein RAMP4 containing protein,
           expressed [Oryza sativa Japonica Group]
          Length = 66

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   PETTAKKANNYPVGPILLGFFIFVVIGSC 87
           PETT KK N+YPVGP++LGFFIFVVIGSC
Sbjct: 26  PETTVKKGNDYPVGPMVLGFFIFVVIGSC 54


>gb|AAW23953.1| predicted membrane protein 3 [Brassica juncea]
          Length = 51

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = +1

Query: 1   PETTAKKANNYPVGPILLGFFIFVVIGSC 87
           PETT KK  +YPVGPILLGFF+FVVIGSC
Sbjct: 20  PETTTKKGKDYPVGPILLGFFVFVVIGSC 48


>gb|AAT08724.1| unknown [Hyacinthus orientalis]
          Length = 85

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/28 (89%), Positives = 26/28 (92%)
 Frame = +1

Query: 1   PETTAKKANNYPVGPILLGFFIFVVIGS 84
           PETT KK N+YPVGPILLGFFIFVVIGS
Sbjct: 43  PETTVKKGNDYPVGPILLGFFIFVVIGS 70


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