BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha26_contig00030728
         (806 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU32928.1| hypothetical protein MIMGU_mgv1a007574mg [Mimulus...   237   3e-60
gb|EPS59797.1| hypothetical protein M569_15007 [Genlisea aurea]       229   9e-58
ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249...   223   5e-56
ref|XP_004236702.1| PREDICTED: mediator of RNA polymerase II tra...   222   1e-55
ref|XP_004236703.1| PREDICTED: mediator of RNA polymerase II tra...   220   4e-55
ref|XP_006480577.1| PREDICTED: mediator of RNA polymerase II tra...   210   6e-52
ref|XP_006338527.1| PREDICTED: mediator of RNA polymerase II tra...   210   6e-52
ref|XP_006428900.1| hypothetical protein CICLE_v10011831mg [Citr...   210   6e-52
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   206   8e-51
ref|XP_007156133.1| hypothetical protein PHAVU_003G261400g [Phas...   206   1e-50
ref|XP_003543839.1| PREDICTED: mediator of RNA polymerase II tra...   196   6e-48
ref|XP_007218109.1| hypothetical protein PRUPE_ppa006763mg [Prun...   192   2e-46
ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II tra...   191   3e-46
ref|XP_002322847.1| hydroxyproline-rich glycoprotein [Populus tr...   189   8e-46
gb|AAP40461.1| unknown protein [Arabidopsis thaliana]                 188   2e-45
ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein...   188   2e-45
ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arab...   186   1e-44
ref|XP_003530648.1| PREDICTED: mediator of RNA polymerase II tra...   184   4e-44
ref|XP_006398742.1| hypothetical protein EUTSA_v10013588mg [Eutr...   183   6e-44
ref|XP_007027217.1| Hydroxyproline-rich glycoprotein family prot...   180   5e-43

>gb|EYU32928.1| hypothetical protein MIMGU_mgv1a007574mg [Mimulus guttatus]
          Length = 403

 Score =  237 bits (605), Expect = 3e-60
 Identities = 144/250 (57%), Positives = 155/250 (62%), Gaps = 28/250 (11%)
 Frame = +1

Query: 139 MLQSIPHQIVQSPARLGLPNPNSPSLQNTNPPKFXXXXXXXXXXXXXXXX---LTTPGVS 309
           MLQ+IPHQ+VQSPARLGLPNPNSPSLQNTN PKF                   LTTP VS
Sbjct: 1   MLQNIPHQVVQSPARLGLPNPNSPSLQNTNLPKFTSQTPQNHQQQQQQQQSNQLTTPAVS 60

Query: 310 STXXXXXXXXXRAQSX--------------------WIXXXXXXXXXXXXXXXXXXXXXX 429
           ST         RAQS                     WI                      
Sbjct: 61  STLLPLLPPLPRAQSLLIQMASLSSKLFEVSPNRPHWIGAFRGQLPSFLSSQPQPVGAAP 120

Query: 430 XX-----AKEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKL 594
                  AKEII+QF  LQTQLFEAVAELQ+ILDLQDAKQKL REI+SKDSALLAFANKL
Sbjct: 121 QDSSPSSAKEIISQFAALQTQLFEAVAELQQILDLQDAKQKLAREIRSKDSALLAFANKL 180

Query: 595 KETEHVLDILVDDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYT 774
           KETE VLDILVDDYSDY R KRTKS ++D      SS TT+ETQ+KL+DILSYAHKISYT
Sbjct: 181 KETERVLDILVDDYSDYHRQKRTKSSEED------SSTTTIETQIKLTDILSYAHKISYT 234

Query: 775 TFAPPEFGSG 804
           TFAPP FG+G
Sbjct: 235 TFAPPVFGAG 244


>gb|EPS59797.1| hypothetical protein M569_15007 [Genlisea aurea]
          Length = 402

 Score =  229 bits (584), Expect = 9e-58
 Identities = 134/248 (54%), Positives = 155/248 (62%), Gaps = 26/248 (10%)
 Frame = +1

Query: 139 MLQSIPHQIVQSPARLGLPNPNSPSLQNTNPPKFXXXXXXXXXXXXXXXXLTTPGVSSTX 318
           MLQS+ HQI+QSPARLGLPNPNSPSLQ+TN  KF                L TP VSST 
Sbjct: 1   MLQSVSHQILQSPARLGLPNPNSPSLQSTNLSKFSAQNPQTLQPNPPINPLPTPSVSSTL 60

Query: 319 XXXXXXXXRAQSX--------------------WIXXXXXXXXXXXXXXXXXXXXXXXX- 435
                   RAQS                     WI                         
Sbjct: 61  LPLLPPLPRAQSLLLQMASLASKLFEVSPNRAHWISAFRGSLPSFLSSQMQPPSASASIE 120

Query: 436 -----AKEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKE 600
                A++I++QF  LQTQLFEAVAELQEILDLQDAKQK+ REI+++DSALL FAN+L+E
Sbjct: 121 SYPSSARDIVSQFKTLQTQLFEAVAELQEILDLQDAKQKVAREIRNRDSALLLFANRLRE 180

Query: 601 TEHVLDILVDDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTF 780
            E+VLD LVDDYSDYRRPKRTKS +D D+  +S++ TTV TQLKLSDI+SYAHKISYTTF
Sbjct: 181 AENVLDTLVDDYSDYRRPKRTKSENDGDD--SSTATTTVATQLKLSDIMSYAHKISYTTF 238

Query: 781 APPEFGSG 804
           APPEFG+G
Sbjct: 239 APPEFGAG 246


>ref|XP_002273310.1| PREDICTED: uncharacterized protein LOC100249946 [Vitis vinifera]
          Length = 414

 Score =  223 bits (569), Expect = 5e-56
 Identities = 134/247 (54%), Positives = 152/247 (61%), Gaps = 25/247 (10%)
 Frame = +1

Query: 139 MLQSIPHQIVQSPARLGLPNPNSPSLQNTNPPKFXXXXXXXXXXXXXXXXLTTPGVSSTX 318
           MLQS+ HQIVQSPARLGLPNPNSPSLQN+  PK                 L+T   SST 
Sbjct: 1   MLQSVQHQIVQSPARLGLPNPNSPSLQNSTAPKLSSQIPQSQQPHQQSN-LSTTTTSSTL 59

Query: 319 XXXXXXXXRAQSX--------------------WIXXXXXXXXXXXXXXXXXXXXXXXX- 435
                   RAQS                     W+                         
Sbjct: 60  LSLLPPLSRAQSLLLQMASLASRLFEVSPNRSLWLTSFRGTLPTFLSSQSIPPTPTPLEH 119

Query: 436 ----AKEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKET 603
                KEI++ FT+LQTQLFEAVAELQEILDLQDAKQK+TREI+SKDSA+LAFANKLKE 
Sbjct: 120 SPSSTKEILSLFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEA 179

Query: 604 EHVLDILVDDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFA 783
           E VLDILVDDYSDYRRPKR+ + DD ++  +SS  TTV +QL LSDILSYAH+ISYTTFA
Sbjct: 180 EAVLDILVDDYSDYRRPKRSNTADDSED--SSSCTTTVASQLNLSDILSYAHRISYTTFA 237

Query: 784 PPEFGSG 804
           PPEFG+G
Sbjct: 238 PPEFGAG 244


>ref|XP_004236702.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like isoform 1 [Solanum lycopersicum]
          Length = 413

 Score =  222 bits (566), Expect = 1e-55
 Identities = 133/245 (54%), Positives = 151/245 (61%), Gaps = 22/245 (8%)
 Frame = +1

Query: 136 KMLQSIPHQIVQSPARLGLPNPNSPSLQNTNP-PKFXXXXXXXXXXXXXXXXLTTPGVSS 312
           KMLQ++PHQ +QSPARLGLP P+SPSLQN N  PKF                LTT   SS
Sbjct: 12  KMLQNVPHQPLQSPARLGLPTPSSPSLQNPNTAPKFSSQVSQPHQPHQQANILTTTTTSS 71

Query: 313 TXXXXXXXXXRAQSXWIXXXXXXXXXXXXXXXXXXXXXXXX------------------- 435
           T         RAQS  I                                           
Sbjct: 72  TLLPLLPPLSRAQSLLIQMASLASRLFEVSPNRSHWLSAFRGSLPSFLPSVAPVPQDSCP 131

Query: 436 --AKEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEH 609
             +KEI++ FT+LQTQLFEAVAELQEILDLQD KQKLTRE++SKDS++LAFANKLKE E 
Sbjct: 132 SSSKEILSVFTSLQTQLFEAVAELQEILDLQDEKQKLTREVRSKDSSILAFANKLKEAER 191

Query: 610 VLDILVDDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPP 789
           VLD+LVDDYSDYRRPK+ K  +D +E    SS TTV TQLKLSDILSYAH+ISYTTFAPP
Sbjct: 192 VLDMLVDDYSDYRRPKQAKLENDTEE----SSVTTVATQLKLSDILSYAHRISYTTFAPP 247

Query: 790 EFGSG 804
           EFG+G
Sbjct: 248 EFGAG 252


>ref|XP_004236703.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like isoform 2 [Solanum lycopersicum]
          Length = 401

 Score =  220 bits (561), Expect = 4e-55
 Identities = 132/244 (54%), Positives = 150/244 (61%), Gaps = 22/244 (9%)
 Frame = +1

Query: 139 MLQSIPHQIVQSPARLGLPNPNSPSLQNTNP-PKFXXXXXXXXXXXXXXXXLTTPGVSST 315
           MLQ++PHQ +QSPARLGLP P+SPSLQN N  PKF                LTT   SST
Sbjct: 1   MLQNVPHQPLQSPARLGLPTPSSPSLQNPNTAPKFSSQVSQPHQPHQQANILTTTTTSST 60

Query: 316 XXXXXXXXXRAQSXWIXXXXXXXXXXXXXXXXXXXXXXXX-------------------- 435
                    RAQS  I                                            
Sbjct: 61  LLPLLPPLSRAQSLLIQMASLASRLFEVSPNRSHWLSAFRGSLPSFLPSVAPVPQDSCPS 120

Query: 436 -AKEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHV 612
            +KEI++ FT+LQTQLFEAVAELQEILDLQD KQKLTRE++SKDS++LAFANKLKE E V
Sbjct: 121 SSKEILSVFTSLQTQLFEAVAELQEILDLQDEKQKLTREVRSKDSSILAFANKLKEAERV 180

Query: 613 LDILVDDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPE 792
           LD+LVDDYSDYRRPK+ K  +D +E    SS TTV TQLKLSDILSYAH+ISYTTFAPPE
Sbjct: 181 LDMLVDDYSDYRRPKQAKLENDTEE----SSVTTVATQLKLSDILSYAHRISYTTFAPPE 236

Query: 793 FGSG 804
           FG+G
Sbjct: 237 FGAG 240


>ref|XP_006480577.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like isoform X1 [Citrus sinensis]
           gi|568853906|ref|XP_006480578.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like isoform
           X2 [Citrus sinensis]
          Length = 420

 Score =  210 bits (534), Expect = 6e-52
 Identities = 136/256 (53%), Positives = 148/256 (57%), Gaps = 38/256 (14%)
 Frame = +1

Query: 151 IPHQIVQSPARLGLPNPNSPSLQNTN----PPKFXXXXXXXXXXXXXXXXL-----TTPG 303
           + HQIVQSPARLGL NPNSPSLQN N    P KF                      TT  
Sbjct: 2   LQHQIVQSPARLGLTNPNSPSLQNPNPNPSPTKFPTSATHHHLRSATPPTAPITTGTTAC 61

Query: 304 VSSTXXXXXXXXXRAQ--------------------SXWIXXXXXXXXXXXXXXXXXXXX 423
            SST         RAQ                    S WI                    
Sbjct: 62  TSSTLLSLLPPLPRAQALLLQMASLASKLFEVSPNRSLWISAFRGSLPTFLSSQAQSQPP 121

Query: 424 XXXXA-----KEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFAN 588
               +     KEIIA FT+LQTQLFEAVAELQEILDLQDAKQK+ REIK+KDSA+LAFAN
Sbjct: 122 PPIDSSPSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFAN 181

Query: 589 KLKETEHVLDILVDDYSDYRRPKRTKSV----DDDDEGNASSSKTTVETQLKLSDILSYA 756
           K+KE E VLDILVDDYSDYRRPKR KS     +DDD G+ S   TTVE+QL LSDILSYA
Sbjct: 182 KIKEAERVLDILVDDYSDYRRPKRVKSEGGDGNDDDSGSCS---TTVESQLNLSDILSYA 238

Query: 757 HKISYTTFAPPEFGSG 804
           H+ISYTTFAPPEFG+G
Sbjct: 239 HRISYTTFAPPEFGAG 254


>ref|XP_006338527.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like [Solanum tuberosum]
          Length = 398

 Score =  210 bits (534), Expect = 6e-52
 Identities = 130/244 (53%), Positives = 147/244 (60%), Gaps = 22/244 (9%)
 Frame = +1

Query: 139 MLQSIPHQIVQSPARLGLPNPNSPSLQNTNPP-KFXXXXXXXXXXXXXXXXLTTPGVSST 315
           MLQ++ HQ++QSPARLGLP P+SPSLQNT PP KF                LTT   SST
Sbjct: 1   MLQNVQHQLLQSPARLGLPTPSSPSLQNTAPPPKFSSQVSQPNQQANI---LTTTTTSST 57

Query: 316 XXXXXXXXXRAQSXWIXXXXXXXXXXXXXXXXXXXXXXXX-------------------- 435
                    RAQS  I                                            
Sbjct: 58  LLPLLPPLSRAQSLLIQMASLGSRLFEVSTNRSHWLSAFRGSFPSFLPSTSPIPQDSSPS 117

Query: 436 -AKEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHV 612
            +KEI++ FT+LQTQLFEAVAELQEILDLQD KQK+TREI+S DSA+LAFANKLK  E V
Sbjct: 118 SSKEILSVFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRSNDSAILAFANKLKGAERV 177

Query: 613 LDILVDDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPE 792
           LD LVDDY+DYRRPKR K  +D +E    SS T+V TQLKLSDILSYAH+ISYTTFAPPE
Sbjct: 178 LDNLVDDYADYRRPKRAKLENDTEE----SSVTSVATQLKLSDILSYAHRISYTTFAPPE 233

Query: 793 FGSG 804
           FG G
Sbjct: 234 FGGG 237


>ref|XP_006428900.1| hypothetical protein CICLE_v10011831mg [Citrus clementina]
           gi|557530957|gb|ESR42140.1| hypothetical protein
           CICLE_v10011831mg [Citrus clementina]
          Length = 420

 Score =  210 bits (534), Expect = 6e-52
 Identities = 136/256 (53%), Positives = 148/256 (57%), Gaps = 38/256 (14%)
 Frame = +1

Query: 151 IPHQIVQSPARLGLPNPNSPSLQNTN----PPKFXXXXXXXXXXXXXXXXL-----TTPG 303
           + HQIVQSPARLGL NPNSPSLQN N    P KF                      TT  
Sbjct: 2   LQHQIVQSPARLGLTNPNSPSLQNPNPNPSPTKFPTSATHHHLRSATPPTAPITTGTTAC 61

Query: 304 VSSTXXXXXXXXXRAQ--------------------SXWIXXXXXXXXXXXXXXXXXXXX 423
            SST         RAQ                    S WI                    
Sbjct: 62  TSSTLLSLLPPLPRAQALLLQMASLASKLFEVSPNRSLWISAFRGSLPTFLSSQAQSQPP 121

Query: 424 XXXXA-----KEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFAN 588
               +     KEIIA FT+LQTQLFEAVAELQEILDLQDAKQK+ REIK+KDSA+LAFAN
Sbjct: 122 PPIDSSPSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFAN 181

Query: 589 KLKETEHVLDILVDDYSDYRRPKRTKSV----DDDDEGNASSSKTTVETQLKLSDILSYA 756
           K+KE E VLDILVDDYSDYRRPKR KS     +DDD G+ S   TTVE+QL LSDILSYA
Sbjct: 182 KIKEAERVLDILVDDYSDYRRPKRVKSEGADGNDDDSGSCS---TTVESQLNLSDILSYA 238

Query: 757 HKISYTTFAPPEFGSG 804
           H+ISYTTFAPPEFG+G
Sbjct: 239 HRISYTTFAPPEFGAG 254


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  206 bits (524), Expect = 8e-51
 Identities = 125/237 (52%), Positives = 143/237 (60%), Gaps = 25/237 (10%)
 Frame = +1

Query: 169  QSPARLGLPNPNSPSLQNTNPPKFXXXXXXXXXXXXXXXXLTTPGVSSTXXXXXXXXXRA 348
            +SPARLGLPNPNSPSLQN+  PK                 L+T   SST         RA
Sbjct: 1045 KSPARLGLPNPNSPSLQNSTAPKLSSQIPQSQQPHQQSN-LSTTTTSSTLLSLLPPLSRA 1103

Query: 349  QSX--------------------WIXXXXXXXXXXXXXXXXXXXXXXXX-----AKEIIA 453
            QS                     W+                              KEI++
Sbjct: 1104 QSLLLQMASLASRLFEVSPNRSLWLTSFRGTLPTFLSSQSIPPTPTPLEHSPSSTKEILS 1163

Query: 454  QFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLDILVDD 633
             FT+LQTQLFEAVAELQEILDLQDAKQK+TREI+SKDSA+LAFANKLKE E VLDILVDD
Sbjct: 1164 LFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEAEAVLDILVDD 1223

Query: 634  YSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPEFGSG 804
            YSDYRRPKR+ + DD ++  +SS  TTV +QL LSDILSYAH+ISYTTFAPPEFG+G
Sbjct: 1224 YSDYRRPKRSNTADDSED--SSSCTTTVASQLNLSDILSYAHRISYTTFAPPEFGAG 1278


>ref|XP_007156133.1| hypothetical protein PHAVU_003G261400g [Phaseolus vulgaris]
           gi|593786187|ref|XP_007156134.1| hypothetical protein
           PHAVU_003G261400g [Phaseolus vulgaris]
           gi|561029487|gb|ESW28127.1| hypothetical protein
           PHAVU_003G261400g [Phaseolus vulgaris]
           gi|561029488|gb|ESW28128.1| hypothetical protein
           PHAVU_003G261400g [Phaseolus vulgaris]
          Length = 384

 Score =  206 bits (523), Expect = 1e-50
 Identities = 127/238 (53%), Positives = 141/238 (59%), Gaps = 20/238 (8%)
 Frame = +1

Query: 151 IPHQIVQSPARLGLPNPNSPSLQNTNPPKFXXXXXXXXXXXXXXXXLTTPGVSSTXXXXX 330
           + HQIVQSPARLGL NPNSPS+ N  PPK                  +TP  SS      
Sbjct: 2   LQHQIVQSPARLGLANPNSPSIPNPTPPKLPPTQTQQPQDRNS----STP--SSALLSLL 55

Query: 331 XXXXRAQ--------------------SXWIXXXXXXXXXXXXXXXXXXXXXXXXAKEII 450
               RAQ                    S W+                        AKEII
Sbjct: 56  PPLTRAQALLHQMASLASKLFEVSPNRSLWVTAFRGSPTFLSSQSSTPLDSSPSTAKEII 115

Query: 451 AQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLDILVD 630
           + FT LQTQ+FEAVAELQEILDLQDAKQK+ REI+S+DS LLAFANKLKE E  LDILVD
Sbjct: 116 SLFTVLQTQIFEAVAELQEILDLQDAKQKMDREIRSQDSMLLAFANKLKEAECCLDILVD 175

Query: 631 DYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPEFGSG 804
           DYSDYRR KR+KS DDD     S + +TV +QLKLSDILSYAHKISYTTFAPPEFG+G
Sbjct: 176 DYSDYRRSKRSKSGDDD-----SMTSSTVSSQLKLSDILSYAHKISYTTFAPPEFGAG 228


>ref|XP_003543839.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like isoform X1 [Glycine max]
           gi|571496579|ref|XP_006593648.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like isoform
           X2 [Glycine max] gi|571496582|ref|XP_006593649.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 4-like isoform X3 [Glycine max]
           gi|571496584|ref|XP_006593650.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like isoform
           X4 [Glycine max] gi|571496586|ref|XP_006593651.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 4-like isoform X5 [Glycine max]
           gi|571496588|ref|XP_006593652.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like isoform
           X6 [Glycine max] gi|571496590|ref|XP_006593653.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 4-like isoform X7 [Glycine max]
           gi|571496592|ref|XP_006593654.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like isoform
           X8 [Glycine max] gi|571496594|ref|XP_006593655.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 4-like isoform X9 [Glycine max]
           gi|571496596|ref|XP_006593656.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like isoform
           X10 [Glycine max] gi|571496598|ref|XP_006593657.1|
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 4-like isoform X11 [Glycine max]
           gi|571496600|ref|XP_006593658.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like isoform
           X12 [Glycine max]
          Length = 384

 Score =  196 bits (499), Expect = 6e-48
 Identities = 122/238 (51%), Positives = 137/238 (57%), Gaps = 20/238 (8%)
 Frame = +1

Query: 151 IPHQIVQSPARLGLPNPNSPSLQNTNPPKFXXXXXXXXXXXXXXXXLTTPGVSSTXXXXX 330
           + HQIV SPARLGL NPNSPS+ N  PPK                  +TP  SS      
Sbjct: 2   LQHQIVLSPARLGLANPNSPSIPNPTPPKLPPTHTQDRNS-------STP--SSALLSLL 52

Query: 331 XXXXRAQ--------------------SXWIXXXXXXXXXXXXXXXXXXXXXXXXAKEII 450
               RAQ                    S W+                        AKEII
Sbjct: 53  PPLPRAQALLVQLASLASKLFEVSPNRSLWVTAFRGSLPTFLSSHSSTPLCASSNAKEII 112

Query: 451 AQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLDILVD 630
           + FT LQTQ+FEAVAELQEILDLQDAKQK+ REI S+DS LL+FANKLK+ E  LDILVD
Sbjct: 113 SLFTVLQTQIFEAVAELQEILDLQDAKQKIDREIHSQDSTLLSFANKLKDAESCLDILVD 172

Query: 631 DYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPEFGSG 804
           DYSDYRR KR K  DDD     S + +TV +QLKLSDILSYAH+ISYTTFAPPEFG+G
Sbjct: 173 DYSDYRRSKRLKFGDDD-----SMTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAG 225


>ref|XP_007218109.1| hypothetical protein PRUPE_ppa006763mg [Prunus persica]
           gi|462414571|gb|EMJ19308.1| hypothetical protein
           PRUPE_ppa006763mg [Prunus persica]
          Length = 396

 Score =  192 bits (487), Expect = 2e-46
 Identities = 118/240 (49%), Positives = 138/240 (57%), Gaps = 25/240 (10%)
 Frame = +1

Query: 160 QIVQSPARLGLPNPNSPSLQNTNPPKFXXXXXXXXXXXXXXXXLTTPGVSSTXXXXXXXX 339
           QIVQSPARLGL NP SPSLQN  PPK                    P +S T        
Sbjct: 5   QIVQSPARLGLTNPTSPSLQNPTPPKLPSQQ---------------PSLSPTLLSLLAPL 49

Query: 340 XRAQSX--------------------WIXXXXXXXXXXXXXXXXXXXXXXXXA-----KE 444
            RAQS                     W+                        +     KE
Sbjct: 50  PRAQSLLIQMASLASKLFEVSPNRSLWLNAFRGNFPTFLSSQSQSLPSTAPDSSPSSTKE 109

Query: 445 IIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLDIL 624
           I++QFT LQTQLFEAVAELQEILDLQDAK K+ RE++SKD+ALL+F+ KLK+ E VLD L
Sbjct: 110 ILSQFTALQTQLFEAVAELQEILDLQDAKLKIAREVRSKDAALLSFSKKLKDVEQVLDNL 169

Query: 625 VDDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPEFGSG 804
           VDDYSD+ RPKRTK  +D  E ++S + TTV +QL LSDILSYAH+ISYTTFAPPEFG+G
Sbjct: 170 VDDYSDFSRPKRTKQ-EDGAEDDSSCTTTTVASQLNLSDILSYAHRISYTTFAPPEFGAG 228


>ref|XP_004142109.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like [Cucumis sativus]
           gi|449520010|ref|XP_004167027.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 4-like [Cucumis
           sativus]
          Length = 404

 Score =  191 bits (485), Expect = 3e-46
 Identities = 117/243 (48%), Positives = 140/243 (57%), Gaps = 25/243 (10%)
 Frame = +1

Query: 151 IPHQIVQSPARLGLPNPNSPSLQNTNPPKFXXXXXXXXXXXXXXXXLTTPGVSSTXXXXX 330
           + HQIVQSPARLGL NPNSPS+QN  PPK                 L++   SST     
Sbjct: 2   LQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSN---LSSSTPSSTLLPLL 58

Query: 331 XXXXRAQ--------------------SXWIXXXXXXXXXXXXXXXXXXXXXXXXA---- 438
               RAQ                    S W+                        +    
Sbjct: 59  PPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPSS 118

Query: 439 -KEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVL 615
            KEI++ F  LQTQLFEAVAELQEILDLQD+KQK+  EI++KD+AL AFANKLKE E VL
Sbjct: 119 SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVL 178

Query: 616 DILVDDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPEF 795
           D+L DDY+DY+RP+R K+  + D  N S   TTV +QL+LSDILSYAH+ISYTTFAPPEF
Sbjct: 179 DVLFDDYADYQRPRRDKT--EGDAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEF 236

Query: 796 GSG 804
           G+G
Sbjct: 237 GAG 239


>ref|XP_002322847.1| hydroxyproline-rich glycoprotein [Populus trichocarpa]
           gi|222867477|gb|EEF04608.1| hydroxyproline-rich
           glycoprotein [Populus trichocarpa]
          Length = 397

 Score =  189 bits (481), Expect = 8e-46
 Identities = 121/239 (50%), Positives = 141/239 (58%), Gaps = 23/239 (9%)
 Frame = +1

Query: 157 HQIVQSPARLGLPNPNSPSL--QNTNPPKFXXXXXXXXXXXXXXXXLTTPGVSSTXXXXX 330
           HQIVQSPARLGL NP SPSL  Q  NPP                   TT   SS      
Sbjct: 4   HQIVQSPARLGLTNPTSPSLPVQTPNPPPPKFPNPQPPQHHHPSTTTTTTTTSSALLSLL 63

Query: 331 XXXXRAQSX--------------------WIXXXXXXXXXXXXXXXXXXXXXXXXA-KEI 447
               RAQS                     W+                        + KEI
Sbjct: 64  PPLPRAQSLLLQMASLATKLFELSPNRPHWLSAYRGTLPTFLPSQSQSLDEPTPTSTKEI 123

Query: 448 IAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLDILV 627
           I+ FT+LQTQLFE+VAELQEILDLQD+KQ++++EIKSKDSALL FANKLKE E VLDILV
Sbjct: 124 ISLFTSLQTQLFESVAELQEILDLQDSKQRISQEIKSKDSALLNFANKLKEAERVLDILV 183

Query: 628 DDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPEFGSG 804
           DDY+DYRR  R     +++E NA+++ TTV +QLKLSDILSYAH+ISYTTFAPPEFG+G
Sbjct: 184 DDYADYRR--RRPIPPNEEEENATNT-TTVASQLKLSDILSYAHRISYTTFAPPEFGAG 239


>gb|AAP40461.1| unknown protein [Arabidopsis thaliana]
          Length = 426

 Score =  188 bits (477), Expect = 2e-45
 Identities = 96/125 (76%), Positives = 112/125 (89%), Gaps = 3/125 (2%)
 Frame = +1

Query: 439 KEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLD 618
           KEI++QF +LQTQLFEAV ELQEILDLQDAKQK+ REIKSKDS+LLAFANKLK+ E VLD
Sbjct: 142 KEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLD 201

Query: 619 ILVDDYSDYRRPKRTKSVDDDDEGN---ASSSKTTVETQLKLSDILSYAHKISYTTFAPP 789
           +LVDDYSDYR+PKR+K +++DDE N   +SSS TTV +QLKL DIL+YAHKISYTTFAPP
Sbjct: 202 MLVDDYSDYRKPKRSK-IEEDDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPP 260

Query: 790 EFGSG 804
           EFG+G
Sbjct: 261 EFGAG 265


>ref|NP_195905.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|75181168|sp|Q9LZ00.1|MED4_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           4 gi|7413560|emb|CAB86039.1| putative protein
           [Arabidopsis thaliana] gi|332003144|gb|AED90527.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
          Length = 426

 Score =  188 bits (477), Expect = 2e-45
 Identities = 96/125 (76%), Positives = 112/125 (89%), Gaps = 3/125 (2%)
 Frame = +1

Query: 439 KEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLD 618
           KEI++QF +LQTQLFEAV ELQEILDLQDAKQK+ REIKSKDS+LLAFANKLK+ E VLD
Sbjct: 142 KEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLD 201

Query: 619 ILVDDYSDYRRPKRTKSVDDDDEGN---ASSSKTTVETQLKLSDILSYAHKISYTTFAPP 789
           +LVDDYSDYR+PKR+K +++DDE N   +SSS TTV +QLKL DIL+YAHKISYTTFAPP
Sbjct: 202 MLVDDYSDYRKPKRSK-IEEDDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPP 260

Query: 790 EFGSG 804
           EFG+G
Sbjct: 261 EFGAG 265


>ref|XP_002870993.1| hypothetical protein ARALYDRAFT_487063 [Arabidopsis lyrata subsp.
           lyrata] gi|297316830|gb|EFH47252.1| hypothetical protein
           ARALYDRAFT_487063 [Arabidopsis lyrata subsp. lyrata]
          Length = 428

 Score =  186 bits (471), Expect = 1e-44
 Identities = 93/125 (74%), Positives = 111/125 (88%), Gaps = 3/125 (2%)
 Frame = +1

Query: 439 KEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLD 618
           KEI++QF +LQTQLFEAV ELQEILDLQDAKQK+ REIKS+DS+LLAFANKLK+ E VLD
Sbjct: 142 KEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSRDSSLLAFANKLKDAERVLD 201

Query: 619 ILVDDYSDYRRPKRTKSVDDDDEGN---ASSSKTTVETQLKLSDILSYAHKISYTTFAPP 789
           +LV+DYSDYR+PKR+K V +++E N   +SSS TTV +QLKL DIL+YAHKISYTTFAPP
Sbjct: 202 MLVEDYSDYRKPKRSKIVSEEEEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPP 261

Query: 790 EFGSG 804
           EFG+G
Sbjct: 262 EFGAG 266


>ref|XP_003530648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           4-like [Glycine max]
          Length = 388

 Score =  184 bits (466), Expect = 4e-44
 Identities = 117/237 (49%), Positives = 136/237 (57%), Gaps = 19/237 (8%)
 Frame = +1

Query: 151 IPHQIVQSPARLGL--------PNPNSPSL----------QNTNPPKFXXXXXXXXXXXX 276
           + HQIVQSPARLGL        PNP  P L          +N++ P              
Sbjct: 2   LQHQIVQSPARLGLANPNSPSIPNPTPPKLPPTQTHHPQDRNSSTPSSALLSLLPPLPRA 61

Query: 277 XXXXLTTPGVSSTXXXXXXXXXRAQSXWIXXXXXXXXXXXXXXXXXXXXXXXX-AKEIIA 453
                    ++S            +S W+                         AKEII+
Sbjct: 62  QALLAQMASLASKLFDVSPN----RSLWVTAFRGSLPTFLSSHSSTPLDTSPSNAKEIIS 117

Query: 454 QFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLDILVDD 633
            FT LQTQ+FEAVAELQEILDLQDAKQK+ REI+S+DS LLAFANKLKE E  LDILVDD
Sbjct: 118 LFTVLQTQIFEAVAELQEILDLQDAKQKIDREIRSQDSTLLAFANKLKEAESCLDILVDD 177

Query: 634 YSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPEFGSG 804
           YSDYRR KR+KS DDD     S + +TV +QLKLSDILSYAH+ISYTTFAPPEFG+G
Sbjct: 178 YSDYRRSKRSKSGDDD-----SMTSSTVSSQLKLSDILSYAHRISYTTFAPPEFGAG 229


>ref|XP_006398742.1| hypothetical protein EUTSA_v10013588mg [Eutrema salsugineum]
           gi|557099832|gb|ESQ40195.1| hypothetical protein
           EUTSA_v10013588mg [Eutrema salsugineum]
          Length = 435

 Score =  183 bits (465), Expect = 6e-44
 Identities = 96/132 (72%), Positives = 112/132 (84%), Gaps = 10/132 (7%)
 Frame = +1

Query: 439 KEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLD 618
           KEI++QF +LQTQLFEAV ELQEILDLQDAKQK+ REIKSKDS+LLAFANKLKE E VLD
Sbjct: 141 KEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKEAERVLD 200

Query: 619 ILVDDYSDYRRPKRTKSV--DDDDEGN--------ASSSKTTVETQLKLSDILSYAHKIS 768
           +LVDDYSDYR+PKR K+V  ++++EGN        +SS  TTV +QLKL DIL+YAHKIS
Sbjct: 201 MLVDDYSDYRKPKRGKTVTEEEEEEGNDNGSSSTSSSSVTTTVSSQLKLKDILAYAHKIS 260

Query: 769 YTTFAPPEFGSG 804
           YTTFAPPEFG+G
Sbjct: 261 YTTFAPPEFGAG 272


>ref|XP_007027217.1| Hydroxyproline-rich glycoprotein family protein [Theobroma cacao]
           gi|508715822|gb|EOY07719.1| Hydroxyproline-rich
           glycoprotein family protein [Theobroma cacao]
          Length = 417

 Score =  180 bits (457), Expect = 5e-43
 Identities = 90/122 (73%), Positives = 104/122 (85%)
 Frame = +1

Query: 439 KEIIAQFTNLQTQLFEAVAELQEILDLQDAKQKLTREIKSKDSALLAFANKLKETEHVLD 618
           KE+++ FT+LQTQLFEAVA+LQEILDLQD KQK+ REI+S D A+LAFANKLKE E VLD
Sbjct: 128 KEVLSLFTSLQTQLFEAVAQLQEILDLQDFKQKIAREIRSNDGAILAFANKLKEAERVLD 187

Query: 619 ILVDDYSDYRRPKRTKSVDDDDEGNASSSKTTVETQLKLSDILSYAHKISYTTFAPPEFG 798
           +LVDDYSDYRRPKR K  +D   G+  SS TTV +QL LSDILSYAH+ISYTTFAPPEFG
Sbjct: 188 MLVDDYSDYRRPKRLKLEEDGGGGDDDSSTTTVASQLNLSDILSYAHRISYTTFAPPEFG 247

Query: 799 SG 804
           +G
Sbjct: 248 AG 249