BLASTX nr result

ID: Mentha25_contig00056685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00056685
         (429 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCU75419.1| PAB-dependent poly(A)-specific ribonuclease subu...    73   4e-11
gb|EPQ61625.1| subunit of the Pan2p-Pan3p polyA-ribonuclease com...    73   4e-11
ref|XP_007295112.1| PAB-dependent poly(A)-specific ribonuclease ...    57   3e-06

>emb|CCU75419.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3 [Blumeria
           graminis f. sp. hordei DH14]
          Length = 627

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   SAQQVKLVSRDNQDCMFVSYKELKKQVETAFKDLSGWGGKCY 128
           SAQQ+KLVSRD+QDCMFVSYKELKKQV++AFK+LSG  GK Y
Sbjct: 581 SAQQIKLVSRDDQDCMFVSYKELKKQVDSAFKELSGQSGKSY 622


>gb|EPQ61625.1| subunit of the Pan2p-Pan3p polyA-ribonuclease complex [Blumeria
           graminis f. sp. tritici 96224]
          Length = 627

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +3

Query: 3   SAQQVKLVSRDNQDCMFVSYKELKKQVETAFKDLSGWGGKCY 128
           SAQQ+KLVSRD+QDCMFVSYKELKKQV++AFK+LSG  GK Y
Sbjct: 581 SAQQIKLVSRDDQDCMFVSYKELKKQVDSAFKELSGQSGKSY 622


>ref|XP_007295112.1| PAB-dependent poly(A)-specific ribonuclease subunit PAN3
           [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
           gi|406861448|gb|EKD14502.1| PAB-dependent
           poly(A)-specific ribonuclease subunit PAN3 [Marssonina
           brunnea f. sp. 'multigermtubi' MB_m1]
          Length = 813

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = +3

Query: 3   SAQQVKLVSRDNQDCMFVSYKELKKQVETAFKDLSGWGGKCY 128
           SA+++KLVSRD+QDCM V YKELKKQV+ AF +L    GK Y
Sbjct: 772 SAEKIKLVSRDDQDCMIVGYKELKKQVDAAFGELLKPSGKRY 813


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