BLASTX nr result
ID: Mentha25_contig00056626
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00056626
(527 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera] 94 2e-17
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 87 3e-15
gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc... 86 5e-15
emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera] 86 7e-15
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 85 9e-15
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 85 9e-15
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 84 2e-14
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 82 1e-13
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 81 2e-13
emb|CAN78864.1| hypothetical protein VITISV_007439 [Vitis vinifera] 80 2e-13
emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera] 79 5e-13
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 79 7e-13
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera] 79 7e-13
gb|AAT47103.1| hypothetical protein [Oryza sativa Japonica Group] 79 7e-13
gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group] 78 1e-12
gb|ABF94964.1| retrotransposon protein, putative, Ty1-copia subc... 77 2e-12
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera] 77 3e-12
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera] 77 3e-12
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 76 4e-12
emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera] 76 4e-12
>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
Length = 2203
Score = 94.4 bits (233), Expect = 2e-17
Identities = 49/130 (37%), Positives = 73/130 (56%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
A GKP+ D++LI++++ G GPE+E +VVN R +A +QE+ Q++E+RL Q A
Sbjct: 63 ASGKPVPDEDLILYILGGLGPEFETIVVNITSRSEAISLQEVHYLLQSHEIRLEQLSAAS 122
Query: 181 FEHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNFGRGSRPNANRNMVCQLCGRTGHVAL 360
A+ G + + G S+S P +R +VCQLCG+ GH A+
Sbjct: 123 VIDVPPAAHITIGGVQNSNTNDGQFKSSSSKNFRPRNVCNPQTSR-IVCQLCGKMGHTAM 181
Query: 361 KCFKRFDVHF 390
KCF RFDV+F
Sbjct: 182 KCFHRFDVYF 191
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 86.7 bits (213), Expect = 3e-15
Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHT-- 174
AIG+P+ + + IM+L+ G G +Y A+V R+D ++ + A+E RL QQ +
Sbjct: 166 AIGEPVSEQDQIMNLLGGLGSDYNAVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIE 225
Query: 175 ALFEHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNF---GRGSR--------PNANRNM 321
L SA A G +++ G P + NF GRG R +++
Sbjct: 226 QLPAMSANYASSSNNRGGGRKYNGGRGPNFMMTNSNFRGRGRGGRYGQSGRQNSSSSERP 285
Query: 322 VCQLCGRTGHVALKCFKRFDVHF--TGNETTNGSNAA-SNGSPKAFLSDFSAGDDAGQGA 492
CQLCG+ GH C+ RFD+ F T N TT SN+ SN P S + DD
Sbjct: 286 QCQLCGKFGHTVQVCYHRFDITFQSTQNNTTGVSNSGNSNSMPAMVASSNNLADD----- 340
Query: 493 ELEGGSWYVDS 525
+WY+DS
Sbjct: 341 -----NWYLDS 346
>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 358
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/158 (31%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Frame = +1
Query: 7 GKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFE 186
GKP+DD+EL+ +++AG +Y ++V + +R + + E+ +E R+ A +
Sbjct: 116 GKPMDDEELVTYILAGLDFDYNSVVSSVANRAEPISVSELHAQLTGFESRMELLQGAA-Q 174
Query: 187 HSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNFGRGS--RPNANRNMVCQLCGRTGHVAL 360
SA A RG G G G FGRG R + +CQLCG+ GH +
Sbjct: 175 SSANSASRGGRGGGGGGGGHGGPNSGNRGRGGFGRGGGGRGDGKLKPICQLCGKIGHTVV 234
Query: 361 KCFKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGD 474
KC+KRFD ++G E + + S G + D A D
Sbjct: 235 KCWKRFDTSYSGEEKSVAAATNSYGVDTNWYIDTGATD 272
>emb|CAN77775.1| hypothetical protein VITISV_021887 [Vitis vinifera]
Length = 735
Score = 85.5 bits (210), Expect = 7e-15
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 5/133 (3%)
Frame = +1
Query: 7 GKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFE 186
GKP+ ++LI++++ G GPE+E +VVN R +A +QE+ Q++E+RL Q A
Sbjct: 164 GKPVPYEDLILYILGGLGPEFETIVVNITSRSEAISLQEVHYLLQSHEIRLEQLSVASVI 223
Query: 187 HSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNFGRGSRPNANRN-----MVCQLCGRTGH 351
A+ G + + G GS++ R RP RN +V QLCG+ GH
Sbjct: 224 DVPPAAHTITGGVQNSNTNDGQFRGSSN------RNFRPRNVRNPQTSRIVYQLCGKMGH 277
Query: 352 VALKCFKRFDVHF 390
A+KCF FDV+F
Sbjct: 278 TAMKCFHHFDVYF 290
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 85.1 bits (209), Expect = 9e-15
Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 13/188 (6%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
AIG+P+ + + +M+L+ G G +Y +V R D ++ I A+E RL QQ +++
Sbjct: 19 AIGEPVLEQDWVMNLLGGLGSDYNVVVTAINIRDDKISLEAIHSMLLAFEHRLEQQ-SSI 77
Query: 181 FEHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNF-----------GRGSRPNAN--RNM 321
+ SA A G +F+ G G A + N+ G+G R N++
Sbjct: 78 EQMSANYASSSNNRGGGRKFNGGCGQGYAPNNNNYTYXSHGXGGRNGQGRRQNSSPSEKP 137
Query: 322 VCQLCGRTGHVALKCFKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGDDAGQGAELE 501
CQLCG+ GH A C+ RFD+ F G TT S + +NG+ L+ ++ ++
Sbjct: 138 QCQLCGKFGHTAQICYHRFDISFQGGXTTT-SPSLNNGNQNNILAMVASFSNSSADE--- 193
Query: 502 GGSWYVDS 525
SWY+DS
Sbjct: 194 --SWYLDS 199
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 85.1 bits (209), Expect = 9e-15
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 13/188 (6%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
AIG+P+ + + +M+L+ G G +Y A+V R D ++ I A+E RL QQ +++
Sbjct: 169 AIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISLEAIHSMLLAFEHRLEQQ-SSI 227
Query: 181 FEHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNF-----------GRGSRPNAN--RNM 321
+ SA A G +F+ G G + + N+ G+G R N++
Sbjct: 228 EQMSANYASSSNNRGGGRKFNGGRGQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPSEKP 287
Query: 322 VCQLCGRTGHVALKCFKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGDDAGQGAELE 501
CQLCG+ GH A C+ RFD+ F G +TT S++ +NG+ + ++ +
Sbjct: 288 QCQLCGKFGHTAQICYHRFDISFQGGQTTI-SHSLNNGNQNNIPAMVASASN-----NPA 341
Query: 502 GGSWYVDS 525
SWY+DS
Sbjct: 342 DESWYLDS 349
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 84.0 bits (206), Expect = 2e-14
Identities = 60/191 (31%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHT-- 174
AIG+P+ + + IM+L+ G G +Y A+V R+D ++ + A+E RL QQ +
Sbjct: 166 AIGEPVSEQDQIMNLLGGLGSDYNAVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIE 225
Query: 175 ALFEHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNF---GRGSR--------PNANRNM 321
L SA A G +++ G P + NF GRG R +++
Sbjct: 226 QLPAMSANYASXSNNRGGGRKYNGGRGPNFMMTNSNFRGRGRGXRYGQSGRQNSSSSERP 285
Query: 322 VCQLCGRTGHVALKCFKRFDVHF--TGNETTNGSNAA-SNGSPKAFLSDFSAGDDAGQGA 492
CQLCG+ GH C+ RFD+ F T N TT SN+ SN P + DD
Sbjct: 286 QCQLCGKFGHTVQVCYHRFDITFQSTQNNTTGVSNSGNSNXMPAMVAXSNNXADD----- 340
Query: 493 ELEGGSWYVDS 525
+WY+DS
Sbjct: 341 -----NWYLDS 346
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 81.6 bits (200), Expect = 1e-13
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 13/169 (7%)
Frame = +1
Query: 7 GKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFE 186
GKPLDD+ELI +++AG +YE +V + + + + + E +++ R +H A +
Sbjct: 159 GKPLDDEELISYVLAGLDDDYEPVVSSLVGKSEVVSLAECYSQLLSFKSRQKLRHAAAHQ 218
Query: 187 HSAQLAYR---GRGAGYPAQFDRGSAPGSAS----STGNFGRGSRPNANRNM------VC 327
S+ A R G+G GY F+RG G + S GRG R N N + VC
Sbjct: 219 ASSVNAARRGGGKGGGY-TPFNRGGRSGGNNNGRRSNNGGGRGGRGNNNGDRGGKPHPVC 277
Query: 328 QLCGRTGHVALKCFKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGD 474
LCG+TGHV C+ R+D +F + AAS G + D A D
Sbjct: 278 HLCGKTGHVVADCWYRYDENFVPENKI--AAAASYGVDTNWYVDTGATD 324
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 80.9 bits (198), Expect = 2e-13
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 15/173 (8%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQ--HT 174
A GKPLDD+E + L+ G ++ LV + R D ++ +YE R+ Q +
Sbjct: 159 AAGKPLDDEEFVSFLLTGLDEDFNPLVTAVVARSDPITPGDLYTQLLSYENRMHLQTGSS 218
Query: 175 ALFEHSAQLAYRGRGAGYPAQ----FDRGSAPGSASSTG---NFGRGSR------PNANR 315
+L + SA GRG + F RG G S G +FGRG+ + +
Sbjct: 219 SLMQSSANARSPGRGMSWGRSGGRGFSRGRGRGRGPSRGGFQSFGRGNNYSGATDADTSS 278
Query: 316 NMVCQLCGRTGHVALKCFKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGD 474
CQ+C R GH AL C+ RFD ++ ++ + S A NGS + +D A D
Sbjct: 279 RPRCQVCSRVGHTALNCWYRFDENYVPDQRSANSAAHQNGSNVPWYTDTGATD 331
>emb|CAN78864.1| hypothetical protein VITISV_007439 [Vitis vinifera]
Length = 1014
Score = 80.5 bits (197), Expect = 2e-13
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 16/191 (8%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
AIG+P+ + + +M+L+ GFG +Y +V R D + I A+E L QQ + +
Sbjct: 33 AIGEPISEQDQVMNLLGGFGSDYNPVVTAINIRDDKISLAAIHSMLLAFEHCLEQQ-SLI 91
Query: 181 FEHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNF-----------GRGSRPNAN--RNM 321
+ A G +F+ G G A + N+ G+G R N+N
Sbjct: 92 EQMFANYVSSSNNRGGGRKFNGGRGQGYAPNNNNYTYRGRGRGGRNGQGGRQNSNPSEKP 151
Query: 322 VCQLCGRTGHVALKCFKRFDVHFTGNETTNG---SNAASNGSPKAFLSDFSAGDDAGQGA 492
CQLCG+ GH A C+ +FD+ F G + T +N N P S ++ D
Sbjct: 152 QCQLCGKFGHTAQICYHKFDISFQGGQITTSPSLNNGNQNNIPTVVASSSNSPTDE---- 207
Query: 493 ELEGGSWYVDS 525
SWY+DS
Sbjct: 208 -----SWYLDS 213
>emb|CAN71996.1| hypothetical protein VITISV_023485 [Vitis vinifera]
Length = 1087
Score = 79.3 bits (194), Expect = 5e-13
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 13/187 (6%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
AIG+P+ + +M+L+ G G +Y A+V R D ++ I A+E L QQ +++
Sbjct: 19 AIGEPVSKQDQVMNLLGGLGFDYNAVVTAINIRDDNISLEAIHSILLAFEHHLEQQ-SSI 77
Query: 181 FEHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNF-----------GRGSRPNAN--RNM 321
+ SA A G +F+ G G A + N+ G+G R N+N
Sbjct: 78 EQMSANYASSSNNRGGGRKFNGGRGQGYAPNNNNYTYRGHGRGGRNGQGGRQNSNPSEKP 137
Query: 322 VCQLCGRTGHVALKCFKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGDDAGQGAELE 501
CQLCG+ GH A C+ FD+ F G +T S + +NG+ + ++ ++
Sbjct: 138 QCQLCGKFGHTAQICYHXFDISFQGGQTIT-SPSLNNGNQNNIXAMVASSSNSPADE--- 193
Query: 502 GGSWYVD 522
SWY+D
Sbjct: 194 --SWYLD 198
>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
gi|31430072|gb|AAP52036.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1058
Score = 79.0 bits (193), Expect = 7e-13
Identities = 54/173 (31%), Positives = 78/173 (45%)
Frame = +1
Query: 7 GKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTALFE 186
GK LDD+EL+ +++AG +Y ++V R D + E+ +E RL AL
Sbjct: 124 GKALDDEELVSYILAGLDFDYNSVVTTVTGRTDPISVNELYGLLVGFESRLELLQNALQA 183
Query: 187 HSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNFGRGSRPNANRNMVCQLCGRTGHVALKC 366
+ ++ G G G+ G+ + G GRG R + CQLCG+ GH KC
Sbjct: 184 SANAMSRGGCGGGH-------GQGGNNNRGGGSGRG-RGDGKPKPTCQLCGKVGHTVAKC 235
Query: 367 FKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGDDAGQGAELEGGSWYVDS 525
+KRFD FT E + + A S+ S G D +WYVDS
Sbjct: 236 WKRFDPSFTREEKSANTAATSS----------SYGIDT---------NWYVDS 269
>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
Length = 2220
Score = 79.0 bits (193), Expect = 7e-13
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHT-- 174
AIG+P+ + + +M+L+ G G +Y A+V R D I+ + A+E RL QQ +
Sbjct: 1011 AIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISIEAVHSMLLAFEHRLEQQSSIK 1070
Query: 175 ----ALFEHSAQLAYRGRGAGYPAQFDRGSAPGSASST-------GNFGRGSRPNAN--R 315
+++ RG G Y + P ++ T G +G+ R N+N
Sbjct: 1071 QFSPISANYASSSNNRGGGRRYNGGRGQNHTPNISNYTYRGCGRGGRYGQNGRHNSNSSE 1130
Query: 316 NMVCQLCGRTGHVALKCFKRFDVHFTGNETTN--GSNAAS-NGSPKAFLSDFSAGDDAGQ 486
CQLCG+ GH C+ RFD+ + ++++N SNA + N P S + DD
Sbjct: 1131 KPQCQLCGKFGHTVQICYHRFDISYQSSQSSNTSPSNAGNPNSIPAMVASSNNLADD--- 1187
Query: 487 GAELEGGSWYVDS 525
+WY+DS
Sbjct: 1188 -------TWYLDS 1193
>gb|AAT47103.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 307
Score = 79.0 bits (193), Expect = 7e-13
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Frame = +1
Query: 10 KPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLA--QQHTALF 183
KPLDD+EL+ ++ AG +Y ++V + R D+ + E +E RL Q ++
Sbjct: 121 KPLDDEELVSYIFAGLDFDYNSVVSSIAGRADSITMSEAYALLVGFESRLELLQGSSSAL 180
Query: 184 EHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNFGRGSRPNANRNMVCQLCGRTGHVALK 363
+S RG G G +G PG G FGRG R + CQLCG+ GH +K
Sbjct: 181 ANSVSRGGRGGGRG------QGGNPGR----GGFGRG-RGDGKPRPTCQLCGKIGHTVIK 229
Query: 364 CFKRFDVHFTGNETTNGSNAASN 432
C+K FD FTG E N + AAS+
Sbjct: 230 CWKCFDHSFTGEE-KNANVAASS 251
>gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 760
Score = 78.2 bits (191), Expect = 1e-12
Identities = 55/164 (33%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
A GK LDD++L+ +++AG +Y +V + I E+ ++E RL +
Sbjct: 93 AAGKKLDDEDLVSYILAGLDFDYYPVVSAVAACVEPITISELITQLISFEQRLELRQGMA 152
Query: 181 FEHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNFGR----GSRPNANRNM--VCQLCGR 342
A A RGRG G RG G + G GR G R AN CQLCG+
Sbjct: 153 ---QANAAMRGRGGGGG---QRGRGRGGGNPGGGGGRDAPQGGRGGANNQEWPKCQLCGK 206
Query: 343 TGHVALKCFKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGD 474
GH +KC+KRFD FTG E + S G + D A D
Sbjct: 207 LGHTVIKCYKRFDTSFTGEEKAANTATTSYGIDTNWYVDTGATD 250
>gb|ABF94964.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 846
Score = 77.0 bits (188), Expect = 2e-12
Identities = 58/170 (34%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
A GK +DDD+L+++++AG YE V++T+ KD + E ++E RLA +H
Sbjct: 108 AAGKVVDDDDLVLYIIAGLDDTYEP-VISTIVGKDFMTLGEAYSQLLSFEQRLALRHGG- 165
Query: 181 FEHSAQLAYRGRGAGYPAQ----FDRGSAPGSASSTGNFGRG------SRPNANRNMV-- 324
+ SA LA RGRG G Q G G+ ++ N GRG +RP + +
Sbjct: 166 -DASANLANRGRGGGGGQQRGDNAGNGRGRGNNNNGANRGRGRGNNGGARPPGGVDNIPK 224
Query: 325 CQLCGRTGHVALKCFKRFDVHFTGNETTNGSNAASNGSPKAFLSDFSAGD 474
CQLC + GH + C+ R+D F +E GS A S G + D A D
Sbjct: 225 CQLCYKRGHTVINCWYRYDEDFVPDEKYAGS-ATSYGIDTNWYVDTGATD 273
>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
Length = 1139
Score = 76.6 bits (187), Expect = 3e-12
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 16/191 (8%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
AIG+ + + + +M+L+ G G +Y +V R D ++ I A++ L QQ +++
Sbjct: 140 AIGELISEQDQVMNLLGGLGSDYNVVVTAINIRDDKISLEAIHSMLLAFKHPLEQQ-SSI 198
Query: 181 FEHSAQLAYRGRGAGYPAQFDRGSAPGSASSTGNF-----------GRGSRPNAN--RNM 321
+ SA A G +F+ G G + N+ G+G R N++
Sbjct: 199 EQMSANYASFSNNRGGGRKFNGGHGQGYTLNNNNYTYRGRGRGGRNGQGGRQNSSPSEKP 258
Query: 322 VCQLCGRTGHVALKCFKRFDVHFTGNETTNG---SNAASNGSPKAFLSDFSAGDDAGQGA 492
CQLCG+ GH A C+ RFD+ F G +TT +N N P S ++ D
Sbjct: 259 QCQLCGKFGHTAQICYHRFDISFQGGQTTTSHSLNNGNQNNIPTMVASASNSPADE---- 314
Query: 493 ELEGGSWYVDS 525
SWY+DS
Sbjct: 315 -----SWYLDS 320
>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
Length = 1198
Score = 76.6 bits (187), Expect = 3e-12
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 17/192 (8%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
AIG+P+ + + +M+L+ G G +Y A+V + D I+ + A+E RL QQ +
Sbjct: 62 AIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIKDDKISIEVVHSMLLAFEHRLEQQSSIE 121
Query: 181 FEHSAQLAY------RGRGAGYPAQFDRGSAPGSASST-------GNFGRGSRPNAN--R 315
S Y RG G Y + P ++ T G +G+ R N+N
Sbjct: 122 QFSSISANYASSSNSRGSGRRYNGGRGQNHTPNISNYTYRGRGRGGRYGQNGRHNSNSSE 181
Query: 316 NMVCQLCGRTGHVALKCFKRFDVHFTGNETTN--GSNAASNGSPKAFLSDFSAGDDAGQG 489
CQLCG+ GH C+ +FD+ + ++++N SNA++ S A ++ +
Sbjct: 182 KPQCQLCGKFGHTVQICYHKFDISYQSSQSSNTSPSNASNPNSIPAMVASSN-------- 233
Query: 490 AELEGGSWYVDS 525
L +WY+DS
Sbjct: 234 -NLAEDTWYLDS 244
>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
Length = 646
Score = 76.3 bits (186), Expect = 4e-12
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRL-----AQ 165
AIG+ + D+ +M ++AG G EY +V + R D+ +Q +Q + YE RL +
Sbjct: 188 AIGESVSIDDQVMAVLAGLGSEYNPIVASITSRLDSISVQALQSYLETYEKRLEIQNSVE 247
Query: 166 QHTALFEHSAQL-AYRGRGAGYPAQFDRGSAPGSA--------SSTGNFGRG----SRPN 306
QH L ++A + RG+ Y F P +A SS G F G R N
Sbjct: 248 QHIPLQANAAMYNSNRGKRKPYQQNFHHSQTPVTATHNFNHRNSSQGGFRGGHSNKGRAN 307
Query: 307 ANRNMVCQLCGRTGHVALKCFKRFDVHFTGNETTNGSNAASNGSPKAFLS 456
CQ+C + GHVA +C+ RFD F + + ++S P+A ++
Sbjct: 308 PGSRPQCQICCKIGHVATECWHRFDNQFQPKASHSNQFSSSAQDPQALMA 357
>emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]
Length = 1083
Score = 76.3 bits (186), Expect = 4e-12
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Frame = +1
Query: 1 AIGKPLDDDELIMHLMAGFGPEYEALVVNTMHRKDAPDIQEIQLAFQAYEVRLAQQHTAL 180
AIG+P+ + + +M+L+ G G +Y +V R D I+ + A+E RL QQ +
Sbjct: 62 AIGEPVSEQDQVMNLLXGLGSDYNXVVTXINIRDDKISIEAVHSMLLAFEHRLEQQSSIE 121
Query: 181 FEHSAQLAY------RGRGAGYPAQFDRGSAPGSASST-------GNFGRGSRPNANRNM 321
Y RG G Y + P ++ T G +G+ R N+N +
Sbjct: 122 QFSPISANYXSSSNSRGGGRXYNGGRXQNHTPNISNYTYRGXGRXGRYGQNRRHNSNSSE 181
Query: 322 V--CQLCGRTGHVALKCFKRFDVHFTGNE--TTNGSNAAS-NGSPKAFLSDFSAGDDAGQ 486
CQLCG+ GH+ C+ RFD+ + ++ T+ SNA + N P S + DD
Sbjct: 182 KPQCQLCGKFGHIVQICYXRFDISYQSSQXSNTSPSNAGNPNXIPAMVASSNNLADD--- 238
Query: 487 GAELEGGSWYVDS 525
+WY+DS
Sbjct: 239 -------TWYLDS 244