BLASTX nr result

ID: Mentha25_contig00055794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00055794
         (382 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360766.1| PREDICTED: proteasome subunit beta type-2-A-...    49   9e-06
ref|XP_004247579.1| PREDICTED: proteasome subunit beta type-2-A-...    49   9e-06

>ref|XP_006360766.1| PREDICTED: proteasome subunit beta type-2-A-like [Solanum
           tuberosum]
          Length = 204

 Score = 48.5 bits (114), Expect(2) = 9e-06
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -2

Query: 165 AQFTEYVQKNVALYQFRNGIPILRQQTS 82
           AQFTEYVQKNVALYQFRNGIP+    T+
Sbjct: 54  AQFTEYVQKNVALYQFRNGIPLTTAATA 81



 Score = 26.6 bits (57), Expect(2) = 9e-06
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1

Query: 94  TTNFTREELATALQK 50
           T NFTR ELATAL+K
Sbjct: 80  TANFTRGELATALRK 94


>ref|XP_004247579.1| PREDICTED: proteasome subunit beta type-2-A-like [Solanum
           lycopersicum]
          Length = 204

 Score = 48.5 bits (114), Expect(2) = 9e-06
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -2

Query: 165 AQFTEYVQKNVALYQFRNGIPILRQQTS 82
           AQFTEYVQKNVALYQFRNGIP+    T+
Sbjct: 54  AQFTEYVQKNVALYQFRNGIPLTTAATA 81



 Score = 26.6 bits (57), Expect(2) = 9e-06
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1

Query: 94  TTNFTREELATALQK 50
           T NFTR ELATAL+K
Sbjct: 80  TANFTRGELATALRK 94


Top