BLASTX nr result

ID: Mentha25_contig00054778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00054778
         (373 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890103.1| aspartate-glutamate racemase family [Arabido...    56   4e-06
ref|XP_002517598.1| racemase and epimerase, acting on amino acid...    56   4e-06
ref|NP_172993.1| aspartate-glutamate racemase-like protein [Arab...    55   8e-06
dbj|BAF01976.1| hypothetical protein [Arabidopsis thaliana]            55   8e-06

>ref|XP_002890103.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp.
           lyrata] gi|297335945|gb|EFH66362.1| aspartate-glutamate
           racemase family [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
 Frame = -1

Query: 241 EGLHTPTNVIGILGG---ESSLIFAKKLIDHDSE-----LPFILCMDPELSNEILPLQKG 86
           + L    N +GI+GG   +S+L F KKL+D  S+     LPF+LC DP L+ E+L  ++ 
Sbjct: 72  DSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSKDGKSSLPFVLCSDPALNKELLLYEEN 131

Query: 85  LL-----RTKKVHIDYSLTVKRLRCKRVILEKC 2
                  R +   +D  L V  LR KR  LEKC
Sbjct: 132 SYPSLYHRAESTPVDPKLIVGNLRNKRRYLEKC 164


>ref|XP_002517598.1| racemase and epimerase, acting on amino acids and derivatives,
           putative [Ricinus communis] gi|223543230|gb|EEF44762.1|
           racemase and epimerase, acting on amino acids and
           derivatives, putative [Ricinus communis]
          Length = 330

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 13/108 (12%)
 Frame = -1

Query: 289 RNRATVKLTASTIYQDEGLHTPTNVIGILGGES---SLIFAKKLIDHDSE-----LPFIL 134
           R R + K + ST    + L    N +GI+GG S   +L F KKL+   SE     LPF+L
Sbjct: 54  RFRGSKKSSGSTSDSSDLLLNQANTVGIIGGTSVNCALNFLKKLVQWSSEDGKDSLPFVL 113

Query: 133 CMDPELSNEILPLQKGLL----RTKKV-HIDYSLTVKRLRCKRVILEK 5
           C DP L+ E+L  ++       R K+   +D++  V+ LR KRV LE+
Sbjct: 114 CSDPVLNKELLSHERDFFPSIGRQKEYSKLDHAQIVENLRSKRVFLER 161


>ref|NP_172993.1| aspartate-glutamate racemase-like protein [Arabidopsis thaliana]
           gi|5103839|gb|AAD39669.1|AC007591_34 Is a member of the
           PF|01177 Aspartate-glutamate racemase family. EST
           gb|T43554 comes from this gene [Arabidopsis thaliana]
           gi|26983862|gb|AAN86183.1| unknown protein [Arabidopsis
           thaliana] gi|332191198|gb|AEE29319.1|
           aspartate-glutamate racemase-like protein [Arabidopsis
           thaliana]
          Length = 330

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
 Frame = -1

Query: 241 EGLHTPTNVIGILGG---ESSLIFAKKLIDHDSE-----LPFILCMDPELSNEILPLQKG 86
           + L    N +GI+GG   +S+L F KKL+D  S      LPF+LC DP L+ E+L  ++ 
Sbjct: 72  DSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEEN 131

Query: 85  LL-----RTKKVHIDYSLTVKRLRCKRVILEKC 2
                  R +   +D  L V+ LR KR  LE+C
Sbjct: 132 SYPSLYHREESTPVDPKLIVENLRNKRRYLERC 164


>dbj|BAF01976.1| hypothetical protein [Arabidopsis thaliana]
          Length = 330

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
 Frame = -1

Query: 241 EGLHTPTNVIGILGG---ESSLIFAKKLIDHDSE-----LPFILCMDPELSNEILPLQKG 86
           + L    N +GI+GG   +S+L F KKL+D  S      LPF+LC DP L+ E+L  ++ 
Sbjct: 72  DSLLRQANTVGIIGGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEEN 131

Query: 85  LL-----RTKKVHIDYSLTVKRLRCKRVILEKC 2
                  R +   +D  L V+ LR KR  LE+C
Sbjct: 132 SYPSLYHREESTPVDPKLIVENLRNKRRYLERC 164


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