BLASTX nr result

ID: Mentha25_contig00054540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00054540
         (413 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA28216.1| hypothetical protein ALNC14_143600 [Albugo laiba...    49   7e-17
emb|CCA28305.1| hypothetical protein ALNC14_144490 [Albugo laiba...    47   9e-15
emb|CCA28070.1| hypothetical protein ALNC14_142140 [Albugo laiba...    47   3e-06

>emb|CCA28216.1| hypothetical protein ALNC14_143600 [Albugo laibachii Nc14]
          Length = 292

 Score = 48.9 bits (115), Expect(3) = 7e-17
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = -2

Query: 127 GDNQDIVRDRYHFDCLTRKRSNLPSLTLHGMIHDGKKAIGTF 2
           GD  DIV DR+  +CLTRK +   +   HG+I+ GKKA GTF
Sbjct: 109 GDRNDIVFDRHRPECLTRKTARTTAWMFHGVIYGGKKAFGTF 150



 Score = 47.8 bits (112), Expect(3) = 7e-17
 Identities = 25/55 (45%), Positives = 32/55 (58%)
 Frame = -3

Query: 294 QKKVMSSTDNHMTTQLNFACWGFTWSQERLYIQSFSDEFWASGEADRRSFVTVLV 130
           ++K  S  +NH   +L FA     W +ERL  Q FSDE WA   A+ R+FVTV V
Sbjct: 53  KRKGFSCLENHKEQRLRFALSARDWDRERLNSQIFSDEVWAYWGANARNFVTVQV 107



 Score = 35.8 bits (81), Expect(3) = 7e-17
 Identities = 17/42 (40%), Positives = 27/42 (64%)
 Frame = -1

Query: 410 RYVKSSEIPTIAQQRNLGNVGLKAVRSALRRIGYERRVAKKR 285
           R V    IP +A +  L   G+KA+R+AL+  G+ RRV+K++
Sbjct: 14  RRVPFQSIPDLAPELELKGHGMKAIRTALKSQGFGRRVSKRK 55


>emb|CCA28305.1| hypothetical protein ALNC14_144490 [Albugo laibachii Nc14]
          Length = 299

 Score = 46.6 bits (109), Expect(3) = 9e-15
 Identities = 25/55 (45%), Positives = 32/55 (58%)
 Frame = -3

Query: 294 QKKVMSSTDNHMTTQLNFACWGFTWSQERLYIQSFSDEFWASGEADRRSFVTVLV 130
           ++K  S+ D H   +L FA     W +ERL  Q FSDE WA   A+ R+FVTV V
Sbjct: 60  KRKGFSNQDVHREQRLRFALRAREWDRERLNSQIFSDEVWAYWGANTRNFVTVQV 114



 Score = 43.9 bits (102), Expect(3) = 9e-15
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = -2

Query: 127 GDNQDIVRDRYHFDCLTRKRSNLPSLTLHGMIHDGKKAIGTF 2
           GD  +IV DR+  +CLTRK +   +   HG+I+ GKKA  TF
Sbjct: 116 GDRNEIVFDRHRPECLTRKSARSTAWMFHGVIYGGKKAFRTF 157



 Score = 34.7 bits (78), Expect(3) = 9e-15
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = -1

Query: 410 RYVKSSEIPTIAQQRNLGNVGLKAVRSALRRIGYERRVAKKR 285
           R V    IP +A +  L   G KA+R+AL+  G+ RRV+K++
Sbjct: 21  RRVPYQSIPDLAPELELQGHGKKAIRTALKSQGFARRVSKRK 62


>emb|CCA28070.1| hypothetical protein ALNC14_142140 [Albugo laibachii Nc14]
          Length = 207

 Score = 47.4 bits (111), Expect(2) = 3e-06
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = -2

Query: 127 GDNQDIVRDRYHFDCLTRKRSNLPSLTLHGMIHDGKKAIGTF 2
           GD  D++ DR+  +CLTRK +   +   HG+I+ GKKA GTF
Sbjct: 24  GDRDDVIFDRHRPECLTRKTAGSVAWMFHGVIYGGKKAFGTF 65



 Score = 29.3 bits (64), Expect(2) = 3e-06
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -3

Query: 192 FSDEFWASGEADRRSFVTVLV 130
           FSDE WA+  A+ R+FVTV V
Sbjct: 2   FSDEVWANWGANNRNFVTVQV 22


Top