BLASTX nr result

ID: Mentha25_contig00053985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00053985
         (501 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007015750.1| F-box and associated interaction domains-con...    63   5e-08

>ref|XP_007015750.1| F-box and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|590586605|ref|XP_007015751.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao] gi|508786113|gb|EOY33369.1| F-box
           and associated interaction domains-containing protein,
           putative isoform 1 [Theobroma cacao]
           gi|508786114|gb|EOY33370.1| F-box and associated
           interaction domains-containing protein, putative isoform
           1 [Theobroma cacao]
          Length = 387

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
 Frame = +2

Query: 2   SQSNDYKLVRSVSNYFHEYYNANGSPGFTHVLDRQIELYSLKTNTWKVIDSPPHKLLLGS 181
           S ++DYK+VR V+NYF E     G   + H    Q+ELYSLK+++WK I S P      S
Sbjct: 162 SITDDYKVVRFVTNYFDENEEEGGLADWIH----QVELYSLKSDSWKEI-SVPEAHPYAS 216

Query: 182 GVYVNNTSKCYWVQHSPFES--VIAFDFEKETLSSCIRMP-PSFITSSDLDCDDPDVFDG 352
            ++ N  +  Y+ Q +      +++FD   E  S+   +P P+F  S             
Sbjct: 217 PLFNNYVNGSYYWQATGNSDYLILSFDMANEKFST---LPLPTFGGSL--------AQYY 265

Query: 353 LSIFEYMGSLAAIGYKKSGFHTLYEAWILKEEEQDWEQEFSIE 481
           L + ++ GSL AI Y + G     + W++      W ++FSIE
Sbjct: 266 LQLLDFNGSLGAIVYPREGTEKSIDLWVM---NGSWTRQFSIE 305


Top