BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00053403
         (489 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK94450.1| polymerase, partial [Blackberry yellow vein-assoc...    67   3e-09
ref|NP_620444.1| replicase [Potato mop-top virus] gi|334350875|s...    65   7e-09
dbj|BAA94797.1| 59-kDa readthrough protein [Soil-borne wheat mos...    65   7e-09
ref|NP_049335.1| 209 kDa readthrough protein [Soil-borne wheat m...    65   1e-08
gb|AFK94462.1| polymerase, partial [Blackberry yellow vein-assoc...    65   1e-08
ref|YP_227378.1| polymerase [Blackberry yellow vein-associated v...    64   2e-08
ref|NP_059510.1| replication protein [Oat golden stripe virus] g...    64   2e-08
gb|AFK94467.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94466.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94464.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94460.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94459.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94458.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94455.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94448.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94445.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94443.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94442.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94441.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08
gb|AFK94440.1| polymerase, partial [Blackberry yellow vein-assoc...    64   2e-08

>gb|AFK94450.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V+ FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVSYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  VS+D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVSFDSDTVCVLVDRLICIRYG 390


>ref|NP_620444.1| replicase [Potato mop-top virus] gi|334350875|sp|Q9QBU0.3|RDRP_PMTVS
            RecName: Full=Replicase large subunit; AltName:
            Full=RNA-directed RNA polymerase; Contains: RecName:
            Full=Replicase small subunit; AltName:
            Full=Methyltransferase/RNA helicase
          Length = 1812

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 43/149 (28%), Positives = 69/149 (46%)
 Frame = -3

Query: 451  MFGNRSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLL 272
            ++   SGN  T G+N      + L +        ++  GDDS++   + +  E+   RL 
Sbjct: 1625 LYQQESGNCDTYGSNTWSAALSLLESLPLEKATFMIFGGDDSLIFFPKGMVIEDPCRRLA 1684

Query: 271  HDWGFSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFLD 92
              W F  K+   K N  SFC  F +K   +KY+   DP +++TKLGR     K +    +
Sbjct: 1685 SMWNFDCKLFNFKNN--SFCGKFLIK-VGEKYKFAPDPYKLLTKLGR--KDIKNSDLLSE 1739

Query: 91   YYVAVFDTAVSYDDDVIVSNLTNAVCVFY 5
             + ++ D   SYDD  ++  L  AV   Y
Sbjct: 1740 IFTSIGDNYKSYDDYRVLEALNVAVMERY 1768


>dbj|BAA94797.1| 59-kDa readthrough protein [Soil-borne wheat mosaic virus]
          Length = 507

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 43/150 (28%), Positives = 73/150 (48%)
 Frame = -3

Query: 466 LTFTTMFGNRSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEH 287
           +T   ++  +SGN  T G+N      A L T        ++  GDDS+++  + L  E+ 
Sbjct: 315 ITAYLLYQQKSGNCDTYGSNTWSAALALLETMPLEKAKFMIFGGDDSLILFPKQLCVEDP 374

Query: 286 VIRLLHDWGFSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPA 107
             RL   W F  K+ + + N+  FC  F +K   DK++   DP +++TK+GR     K  
Sbjct: 375 CRRLASLWNFDCKLFDFQHNM--FCGKFLLK-VGDKFKFAPDPLKLMTKMGR--KDIKDG 429

Query: 106 SYFLDYYVAVFDTAVSYDDDVIVSNLTNAV 17
           +   + +V++ D   +Y D  I+  L  AV
Sbjct: 430 ALLSEIFVSIGDNYRAYRDYRIIEQLAPAV 459


>ref|NP_049335.1| 209 kDa readthrough protein [Soil-borne wheat mosaic virus]
            gi|75569943|sp|Q89249.1|RDRP_SBWMN RecName:
            Full=Replicase large subunit; AltName: Full=209 kDa
            readthrough protein; AltName: Full=RNA-directed RNA
            polymerase; Contains: RecName: Full=Replicase small
            subunit; AltName: Full=150 kDa protein; AltName:
            Full=Methyltransferase/RNA helicase
            gi|295508|gb|AAA48492.1| 209 kDa readthrough protein
            [Soil-borne wheat mosaic virus]
          Length = 1828

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 45/150 (30%), Positives = 74/150 (49%)
 Frame = -3

Query: 466  LTFTTMFGNRSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEH 287
            +T   ++  +SGN  T G+N      A L +        ++  GDDS+++  + L+ E+ 
Sbjct: 1636 ITAYLLYQQKSGNCDTYGSNTWSAALALLESMPLEKAKFMIFGGDDSLILFPKHLTIEDP 1695

Query: 286  VIRLLHDWGFSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPA 107
              RL   W F  K+ + K N+  FC  F +K   D+++   DP ++ITKLGR   +    
Sbjct: 1696 CRRLASLWNFDCKLFDFKHNM--FCGKFLLK-VGDRFKFAPDPMKLITKLGRKDIV--DG 1750

Query: 106  SYFLDYYVAVFDTAVSYDDDVIVSNLTNAV 17
                + +V+V D   SY D  I+  LT A+
Sbjct: 1751 RLLSEIFVSVGDNYRSYRDYRILEQLTYAL 1780


>gb|AFK94462.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++++K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLILSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPVRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFY 5
            +  D  VS+D D +   +  ++C+ Y
Sbjct: 363 TSFKDLMVSFDSDTVCVLVDRSICIRY 389


>ref|YP_227378.1| polymerase [Blackberry yellow vein-associated virus]
          Length = 505

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 328 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 383

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 384 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 442

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 443 TSFKDLMVFFDSDTVCVLVDRLICIRYG 470


>ref|NP_059510.1| replication protein [Oat golden stripe virus]
            gi|6018639|emb|CAB57882.1| replication protein [Oat
            golden stripe virus]
          Length = 1853

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/150 (30%), Positives = 72/150 (48%)
 Frame = -3

Query: 466  LTFTTMFGNRSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEH 287
            +T   ++  +SGN  T G+N      A L T        ++  GDDS+L+  + +  E+ 
Sbjct: 1661 ITAYLLYQQKSGNCDTYGSNTWSAALALLETMPLEHAKFMIFGGDDSLLLFPKKICVEDP 1720

Query: 286  VIRLLHDWGFSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPA 107
              RL   W F  K+ + K N+  FC  F +K   DK++   DP ++ITKLGR   +    
Sbjct: 1721 CRRLASLWNFDCKLFDFKYNM--FCGKFLLK-VGDKWKFAPDPMKLITKLGRKDIV--DG 1775

Query: 106  SYFLDYYVAVFDTAVSYDDDVIVSNLTNAV 17
                + +V++ D   SY D  I+  L  A+
Sbjct: 1776 ELLSEIFVSIGDNYRSYRDYRILEGLGPAL 1805


>gb|AFK94467.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94466.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94464.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSEALLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94460.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94459.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94458.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94455.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94448.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94445.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYEIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94443.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94442.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94441.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDPMVFFDSDTVCVLVDRLICIRYG 390


>gb|AFK94440.1| polymerase, partial [Blackberry yellow vein-associated virus]
          Length = 399

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
 Frame = -3

Query: 439 RSGNAGTLGTNCIVLLFAYLSTFSSAGIVALLIKGDDSVLVTKRSLSNEEHVIRLLHDWG 260
           R+G+  T  +N +V L   LST+    I  LL+ GDDS++ +K  L N  + I    +  
Sbjct: 248 RTGSPNTWLSNTLVTLGIILSTYKIDDIDLLLVSGDDSLIFSKEDLPNLANQI----NQD 303

Query: 259 FSMKIRERKGNVTSFCSSFFVKDSNDKYRLVRDPCRVITKLGRALSLTKPASYFL--DYY 86
           F M+ +    +V  FCS F ++D  +  ++V DP R   KL   + L    S  L  + Y
Sbjct: 304 FGMEAKFIVNSVPYFCSKFIIEDRGE-IKVVPDPVRFFEKLSVPIRLEDFLSETLLKEKY 362

Query: 85  VAVFDTAVSYDDDVIVSNLTNAVCVFYG 2
            +  D  V +D D +   +   +C+ YG
Sbjct: 363 TSFKDLMVFFDSDTVCVLVDRLICIRYG 390