BLASTX nr result

ID: Mentha25_contig00051988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00051988
         (484 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCU76173.1| polyadenylation factor protein [Blumeria gramini...    67   2e-09
gb|EPQ62353.1| Cleavage and polyadenylation factor [Blumeria gra...    67   2e-09
gb|EPE26190.1| RNA-binding, RBD [Glarea lozoyensis ATCC 20868]         57   3e-06

>emb|CCU76173.1| polyadenylation factor protein [Blumeria graminis f. sp. hordei
           DH14]
          Length = 314

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = -2

Query: 483 TDQLMQQVLAMPQEVIDSLPVAERNQLLALRASYGR 376
           T+QLMQQVLAMPQEVIDSLP AERNQLL+LRASYGR
Sbjct: 279 TEQLMQQVLAMPQEVIDSLPAAERNQLLSLRASYGR 314


>gb|EPQ62353.1| Cleavage and polyadenylation factor [Blumeria graminis f. sp.
           tritici 96224]
          Length = 314

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = -2

Query: 483 TDQLMQQVLAMPQEVIDSLPVAERNQLLALRASYGR 376
           T+QLMQQVLAMPQEVIDSLP AERNQLL+LRASYGR
Sbjct: 279 TEQLMQQVLAMPQEVIDSLPAAERNQLLSLRASYGR 314


>gb|EPE26190.1| RNA-binding, RBD [Glarea lozoyensis ATCC 20868]
          Length = 325

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = -2

Query: 480 DQLMQQVLAMPQEVIDSLPVAERNQLLALRASYGR 376
           D LMQQVLAMPQE+IDSLP  +R QL+ALRASYGR
Sbjct: 291 DALMQQVLAMPQEMIDSLPPNDRAQLMALRASYGR 325


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