BLASTX nr result

ID: Mentha25_contig00051764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00051764
         (338 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]         57   2e-06
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...    56   6e-06

>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
 Frame = +3

Query: 93   PKYVPD--LPHTDDNGEFIVAPLGILGNRVVQRKDAENFQILVQWLNSDETVATWEDEMH 266
            PK VP+  LP TDDNG  +  P  +L  R++ + +A   Q  VQW N   + ATWED   
Sbjct: 1242 PKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAATWEDAAF 1301

Query: 267  IRCKFRSFNP 296
            I   F +FNP
Sbjct: 1302 ISKVFPAFNP 1311


>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = +3

Query: 18  PGLLQPLPIPQNAWTHISLDFVEGLPK 98
           PGLLQP+PIP+ AWTHIS+DF+EGLPK
Sbjct: 360 PGLLQPIPIPEMAWTHISMDFIEGLPK 386


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