BLASTX nr result
ID: Mentha25_contig00051730
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00051730
(606 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007159804.1| hypothetical protein PHAVU_002G268700g [Phas... 178 9e-43
ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymera... 174 2e-41
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 173 4e-41
ref|XP_007011110.1| Transcription elongation factor (TFIIS) fami... 172 7e-41
ref|XP_007011109.1| Transcription elongation factor (TFIIS) fami... 172 7e-41
gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis] 171 1e-40
ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymera... 171 1e-40
ref|XP_007048434.1| Transcription elongation factor (TFIIS) fami... 171 1e-40
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262... 171 1e-40
ref|XP_006578814.1| PREDICTED: probable mediator of RNA polymera... 168 1e-39
ref|XP_006578813.1| PREDICTED: probable mediator of RNA polymera... 168 1e-39
ref|XP_006578812.1| PREDICTED: probable mediator of RNA polymera... 168 1e-39
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 168 1e-39
ref|XP_003523244.1| PREDICTED: probable mediator of RNA polymera... 168 1e-39
ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutr... 167 2e-39
ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Caps... 166 5e-39
ref|NP_568218.1| transcription elongation factor (TFIIS) family ... 165 8e-39
dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana] 165 8e-39
ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymera... 164 1e-38
ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymera... 164 1e-38
>ref|XP_007159804.1| hypothetical protein PHAVU_002G268700g [Phaseolus vulgaris]
gi|561033219|gb|ESW31798.1| hypothetical protein
PHAVU_002G268700g [Phaseolus vulgaris]
Length = 308
Score = 178 bits (452), Expect = 9e-43
Identities = 95/185 (51%), Positives = 127/185 (68%), Gaps = 11/185 (5%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFSG---CEN 363
MD ++FRS + +G+D+W +D+AIAVAS DH ELR RRD IV++LYATS C N
Sbjct: 1 MDSKDFRSILESAGIDIWMLMDVAIAVASVDHSDELRRRRDGIVERLYATSSVSSPPCPN 60
Query: 362 CVKQSHEMNSRIVESEKNVTPIEEDE--------EDEQRKILEIKNLLDDHSQNDESLIE 207
C + R +E + NV P E+E +DEQ+KILEIK L+D Q+ +SL+E
Sbjct: 61 CDVD----DVREIEMKSNVNPSVEEEKETCEVLFDDEQKKILEIKEQLEDPHQSIDSLLE 116
Query: 206 LLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQVRRLVKILVRKWKDTVDEWVRQNTPL 27
LLQ L DM+ TF+AL+ET+IGRHV +LRKHSS V++LVK+LVRKWK+ +DEW++ TP
Sbjct: 117 LLQNLADMDITFQALEETDIGRHVNRLRKHSSNDVKKLVKLLVRKWKEIIDEWMKLKTPG 176
Query: 26 EEEAT 12
E T
Sbjct: 177 EATTT 181
>ref|XP_003531399.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Glycine max]
Length = 314
Score = 174 bits (441), Expect = 2e-41
Identities = 95/176 (53%), Positives = 122/176 (69%), Gaps = 6/176 (3%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFSG--CENC 360
MD E+FRS + +GVDVW +D AIAVAS+DH EL+ RRD IV++LYA S C NC
Sbjct: 1 MDSEDFRSILESAGVDVWALMDAAIAVASADHAHELKRRRDGIVERLYAASSPPPLCRNC 60
Query: 359 VK----QSHEMNSRIVESEKNVTPIEEDEEDEQRKILEIKNLLDDHSQNDESLIELLQML 192
+ +S E EK+ P +DEQRKIL+IK L+D Q+++SL+ELLQ L
Sbjct: 61 DAGDGGEIRTQSSPSAEEEKD--PYGGLFDDEQRKILDIKEQLEDPHQSEDSLVELLQNL 118
Query: 191 LDMNTTFKALKETEIGRHVTKLRKHSSEQVRRLVKILVRKWKDTVDEWVRQNTPLE 24
DM+ TF+AL+ET+IGRHV +LRKHSS V+RLVK+LVRKWK+ VDEWV+ P E
Sbjct: 119 ADMDITFQALEETDIGRHVNRLRKHSSNDVKRLVKLLVRKWKEIVDEWVKLKAPGE 174
>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical
protein [Ricinus communis]
Length = 362
Score = 173 bits (438), Expect = 4e-41
Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 43/211 (20%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFSGCENC-- 360
MD+++FRS + SGVDVWT+ID AI VAS D EL+ RRDKIV+ LY++S C NC
Sbjct: 1 MDVDDFRSILESSGVDVWTFIDTAIVVASLDFGNELKQRRDKIVEMLYSSS-GRCRNCDL 59
Query: 359 ----VKQSHEMNSRI---------------------VESEKNVTPIEEDEED-------- 279
+ HE+ R + +++V + +D++D
Sbjct: 60 DVGRINNGHEIKERSHLESKGGGGGGSGSPSTTPRSIHGDEDVDVVNDDDDDDDDDDGLD 119
Query: 278 --------EQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLR 123
EQ+KILEIK L+D Q+++SL++LLQ L DM+ TFKALKET+IGRHV +LR
Sbjct: 120 PYAGLFDDEQKKILEIKQHLEDPDQSEDSLVDLLQSLADMDITFKALKETDIGRHVNQLR 179
Query: 122 KHSSEQVRRLVKILVRKWKDTVDEWVRQNTP 30
KH+S VRRLVK LVRKWKD VDEWV+ N P
Sbjct: 180 KHTSNDVRRLVKQLVRKWKDIVDEWVKLNPP 210
>ref|XP_007011110.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 2, partial [Theobroma cacao]
gi|508728023|gb|EOY19920.1| Transcription elongation
factor (TFIIS) family protein, putative isoform 2,
partial [Theobroma cacao]
Length = 300
Score = 172 bits (436), Expect = 7e-41
Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 25/198 (12%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSF-SGCENCV 357
MDL++FRS + +GVDVWT+ID AI VAS D+ EL+ RRD IV++LYATS + C++C
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCD 60
Query: 356 ----KQSHEMNSRIVESEKN---------VTPIEEDEE-----------DEQRKILEIKN 249
+++N +E TP ++E+ DEQ+++LEIK
Sbjct: 61 FGERSNGYQVNKEGSPNEGKGGEGGRESPFTPQSDNEDGDLDPYGGLFDDEQKRVLEIKE 120
Query: 248 LLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQVRRLVKILVRKW 69
L++ Q+++SL++LLQ L DM+ TF+ALKET+IGRHV KLRKHSS VRRLVK LVRKW
Sbjct: 121 SLEEPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNDVRRLVKQLVRKW 180
Query: 68 KDTVDEWVRQNTPLEEEA 15
K+ VDEWVR N P E E+
Sbjct: 181 KEIVDEWVRVNQPGELES 198
>ref|XP_007011109.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508728022|gb|EOY19919.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
Length = 337
Score = 172 bits (436), Expect = 7e-41
Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 25/198 (12%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSF-SGCENCV 357
MDL++FRS + +GVDVWT+ID AI VAS D+ EL+ RRD IV++LYATS + C++C
Sbjct: 1 MDLDDFRSVLETAGVDVWTFIDSAILVASLDYGQELKQRRDGIVERLYATSMVTRCKSCD 60
Query: 356 ----KQSHEMNSRIVESEKN---------VTPIEEDEE-----------DEQRKILEIKN 249
+++N +E TP ++E+ DEQ+++LEIK
Sbjct: 61 FGERSNGYQVNKEGSPNEGKGGEGGRESPFTPQSDNEDGDLDPYGGLFDDEQKRVLEIKE 120
Query: 248 LLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQVRRLVKILVRKW 69
L++ Q+++SL++LLQ L DM+ TF+ALKET+IGRHV KLRKHSS VRRLVK LVRKW
Sbjct: 121 SLEEPDQSEDSLVDLLQSLADMDITFQALKETDIGRHVNKLRKHSSNDVRRLVKQLVRKW 180
Query: 68 KDTVDEWVRQNTPLEEEA 15
K+ VDEWVR N P E E+
Sbjct: 181 KEIVDEWVRVNQPGELES 198
>gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]
Length = 418
Score = 171 bits (434), Expect = 1e-40
Identities = 93/192 (48%), Positives = 130/192 (67%), Gaps = 22/192 (11%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYA--TSFSGCENC 360
MD ++FR+ + SGVDVWT+ID AIAVAS D+ ELR RRD IV++LYA +S S ++
Sbjct: 1 MDYDDFRAILDSSGVDVWTFIDTAIAVASMDYGGELRQRRDGIVERLYAASSSSSASDHH 60
Query: 359 VKQSHEMNSRIVESEKNVTP-----IEEDE---------------EDEQRKILEIKNLLD 240
+ ++ ++ ++ V+P I+ + +DEQ+KILEIK L+
Sbjct: 61 RPRHYDREAKTAGEKERVSPPTPQSIDRENSDNDGEGLDPYGGLFDDEQKKILEIKEQLE 120
Query: 239 DHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQVRRLVKILVRKWKDT 60
D Q++++L+ELLQ L DM+ TF+ALKET+IGRHV +LRKH S +V+RLVK +VRKWKDT
Sbjct: 121 DSDQSEDTLVELLQSLADMDITFQALKETDIGRHVNRLRKHPSSEVKRLVKQVVRKWKDT 180
Query: 59 VDEWVRQNTPLE 24
VDEWV+ N P E
Sbjct: 181 VDEWVKLNQPGE 192
>ref|XP_003525100.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Glycine max]
Length = 313
Score = 171 bits (434), Expect = 1e-40
Identities = 89/170 (52%), Positives = 122/170 (71%), Gaps = 2/170 (1%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATS-FSGCENCV 357
MD E+FRS + +GVDVW +D AIAVAS DH EL+ RRD+IV++LYA+S C NC
Sbjct: 1 MDSEDFRSILESAGVDVWALMDAAIAVASVDHPDELKRRRDRIVERLYASSALPQCRNCD 60
Query: 356 KQSHEMNSRIVES-EKNVTPIEEDEEDEQRKILEIKNLLDDHSQNDESLIELLQMLLDMN 180
+ E+ ++ S E+ P ++EQ+KIL IK L+D Q+++SL+ELLQ L DM+
Sbjct: 61 PNAGEIRTQSSPSAEEEKDPYGGFMDEEQKKILYIKEQLEDPHQSEDSLVELLQNLADMD 120
Query: 179 TTFKALKETEIGRHVTKLRKHSSEQVRRLVKILVRKWKDTVDEWVRQNTP 30
TF AL+E++IGR+V +LRKHSS V+RLVK+LVRKWK+ VDEWV+ +P
Sbjct: 121 ITFPALEESDIGRYVNRLRKHSSNDVKRLVKLLVRKWKEIVDEWVKLKSP 170
>ref|XP_007048434.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao]
gi|590709002|ref|XP_007048435.1| Transcription
elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508700695|gb|EOX92591.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
gi|508700696|gb|EOX92592.1| Transcription elongation
factor (TFIIS) family protein, putative isoform 1
[Theobroma cacao]
Length = 336
Score = 171 bits (433), Expect = 1e-40
Identities = 100/199 (50%), Positives = 128/199 (64%), Gaps = 25/199 (12%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSF-SGCENCV 357
MDL++FRS + + VDVWT+ID AI VAS D+ EL+ RRD+IV++LYATS + C NC
Sbjct: 1 MDLDDFRSVLETAEVDVWTFIDTAILVASLDYGPELKQRRDRIVERLYATSMVTQCRNCD 60
Query: 356 ----------------KQSHEMNSRIVESEKNVTPIEEDE--------EDEQRKILEIKN 249
+ SHE R + +DE +DEQ+KILEIK
Sbjct: 61 FGERPSDYEVKADLKRESSHEDKRRGGSPNAPQSDNGDDELDPYGGLFDDEQKKILEIKE 120
Query: 248 LLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQVRRLVKILVRKW 69
L++ Q+++SLI+LLQ L DM+ TF+ALKET+IGRHV LRKHSS VRRLVK LVRKW
Sbjct: 121 HLEEPHQSEDSLIDLLQSLADMDITFQALKETDIGRHVNILRKHSSNDVRRLVKQLVRKW 180
Query: 68 KDTVDEWVRQNTPLEEEAT 12
K+ VDEWVR N P E E++
Sbjct: 181 KEIVDEWVRLNQPGELESS 199
>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product
[Vitis vinifera]
Length = 332
Score = 171 bits (433), Expect = 1e-40
Identities = 97/190 (51%), Positives = 123/190 (64%), Gaps = 16/190 (8%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFSGCENCVK 354
MD +EFRS + SGVDVWT I+ A++VAS D+ E + RRD IV++LY S C NC +
Sbjct: 1 MDCDEFRSILESSGVDVWTLIETAVSVASVDYSEEFKGRRDSIVERLYTPVVSRCLNCDR 60
Query: 353 QS-HEMNSRIVESEKN---------VTP--IEEDEE----DEQRKILEIKNLLDDHSQND 222
H+ N EK TP +E D + +EQ KIL IK L+D Q +
Sbjct: 61 DRIHKPNGDRSVKEKMDQLQDESWIETPESVERDRDGSIDEEQSKILAIKERLEDPDQLE 120
Query: 221 ESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQVRRLVKILVRKWKDTVDEWVR 42
+SL++LLQ L DM+ TFKALKET+IGRHV +LRKH S +VRRLVK LVRKWKD VDEWV+
Sbjct: 121 DSLVDLLQSLADMDITFKALKETDIGRHVNRLRKHPSNEVRRLVKQLVRKWKDLVDEWVK 180
Query: 41 QNTPLEEEAT 12
+TP E A+
Sbjct: 181 LSTPGETTAS 190
>ref|XP_006578814.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X4 [Glycine max]
Length = 358
Score = 168 bits (425), Expect = 1e-39
Identities = 90/203 (44%), Positives = 124/203 (61%), Gaps = 37/203 (18%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFS--GCENC 360
MDL++FRS + +GVDVW +ID AIAVASSD +L+ RRD IV++LYA + + C NC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 359 VKQSHEMNSRIVESEKNVTPIEEDE----------------------------------- 285
+ H +N ++ + +P E +
Sbjct: 61 DEGGHRLNGHRIKKQSRHSPSPERQPHRSTATASPATPQSLDNGEDEDNDEDLDPYGGLL 120
Query: 284 EDEQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQ 105
+DEQ+KILEIK L++ Q+++SL+ELLQ L DM+ TF+ LKET+IGRHV +LRKH S
Sbjct: 121 DDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQGLKETDIGRHVNRLRKHPSND 180
Query: 104 VRRLVKILVRKWKDTVDEWVRQN 36
+RRLVK+LVRKWK+ VDEWV+ N
Sbjct: 181 LRRLVKLLVRKWKEIVDEWVKLN 203
>ref|XP_006578813.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X3 [Glycine max]
Length = 364
Score = 168 bits (425), Expect = 1e-39
Identities = 90/203 (44%), Positives = 124/203 (61%), Gaps = 37/203 (18%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFS--GCENC 360
MDL++FRS + +GVDVW +ID AIAVASSD +L+ RRD IV++LYA + + C NC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 359 VKQSHEMNSRIVESEKNVTPIEEDE----------------------------------- 285
+ H +N ++ + +P E +
Sbjct: 61 DEGGHRLNGHRIKKQSRHSPSPERQPHRSTATASPATPQSLDNGEDEDNDEDLDPYGGLL 120
Query: 284 EDEQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQ 105
+DEQ+KILEIK L++ Q+++SL+ELLQ L DM+ TF+ LKET+IGRHV +LRKH S
Sbjct: 121 DDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQGLKETDIGRHVNRLRKHPSND 180
Query: 104 VRRLVKILVRKWKDTVDEWVRQN 36
+RRLVK+LVRKWK+ VDEWV+ N
Sbjct: 181 LRRLVKLLVRKWKEIVDEWVKLN 203
>ref|XP_006578812.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X2 [Glycine max]
Length = 366
Score = 168 bits (425), Expect = 1e-39
Identities = 90/203 (44%), Positives = 124/203 (61%), Gaps = 37/203 (18%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFS--GCENC 360
MDL++FRS + +GVDVW +ID AIAVASSD +L+ RRD IV++LYA + + C NC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 359 VKQSHEMNSRIVESEKNVTPIEEDE----------------------------------- 285
+ H +N ++ + +P E +
Sbjct: 61 DEGGHRLNGHRIKKQSRHSPSPERQPHRSTATASPATPQSLDNGEDEDNDEDLDPYGGLL 120
Query: 284 EDEQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQ 105
+DEQ+KILEIK L++ Q+++SL+ELLQ L DM+ TF+ LKET+IGRHV +LRKH S
Sbjct: 121 DDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQGLKETDIGRHVNRLRKHPSND 180
Query: 104 VRRLVKILVRKWKDTVDEWVRQN 36
+RRLVK+LVRKWK+ VDEWV+ N
Sbjct: 181 LRRLVKLLVRKWKEIVDEWVKLN 203
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Cucumis sativus]
Length = 345
Score = 168 bits (425), Expect = 1e-39
Identities = 96/200 (48%), Positives = 131/200 (65%), Gaps = 26/200 (13%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSF--SGCENC 360
+DL++FR+ + +GVDVWT+ID A+ VAS D+ +L+NRRD IV++LYA + S C NC
Sbjct: 4 LDLDDFRTILDTAGVDVWTFIDTAMEVASLDYGNQLKNRRDGIVERLYALTSPPSRCRNC 63
Query: 359 -VKQSHEMNSRIVESE------KNVTP-------IEEDEE----------DEQRKILEIK 252
++H+ S E + K +P +E D++ DEQ+K+LEIK
Sbjct: 64 DTDRNHDGRSNGCEIKQGSGEVKEASPSTPQFVVVEGDDDGADPYAGLFDDEQKKVLEIK 123
Query: 251 NLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQVRRLVKILVRK 72
L+ Q +++L+ELLQ L DM+ TF+ALKET+IGRHV +LRKH S VRRLVK LVRK
Sbjct: 124 EQLEIPQQPEDALVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRK 183
Query: 71 WKDTVDEWVRQNTPLEEEAT 12
WK+ VDEWVR N P E+ AT
Sbjct: 184 WKEIVDEWVRLNQPGEQTAT 203
>ref|XP_003523244.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X1 [Glycine max]
Length = 356
Score = 168 bits (425), Expect = 1e-39
Identities = 90/203 (44%), Positives = 124/203 (61%), Gaps = 37/203 (18%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFS--GCENC 360
MDL++FRS + +GVDVW +ID AIAVASSD +L+ RRD IV++LYA + + C NC
Sbjct: 1 MDLDDFRSILDTAGVDVWMFIDAAIAVASSDSAGDLKRRRDGIVERLYAATAAPPWCRNC 60
Query: 359 VKQSHEMNSRIVESEKNVTPIEEDE----------------------------------- 285
+ H +N ++ + +P E +
Sbjct: 61 DEGGHRLNGHRIKKQSRHSPSPERQPHRSTATASPATPQSLDNGEDEDNDEDLDPYGGLL 120
Query: 284 EDEQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQ 105
+DEQ+KILEIK L++ Q+++SL+ELLQ L DM+ TF+ LKET+IGRHV +LRKH S
Sbjct: 121 DDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQGLKETDIGRHVNRLRKHPSND 180
Query: 104 VRRLVKILVRKWKDTVDEWVRQN 36
+RRLVK+LVRKWK+ VDEWV+ N
Sbjct: 181 LRRLVKLLVRKWKEIVDEWVKLN 203
>ref|XP_006399468.1| hypothetical protein EUTSA_v10013991mg [Eutrema salsugineum]
gi|312281771|dbj|BAJ33751.1| unnamed protein product
[Thellungiella halophila] gi|557100558|gb|ESQ40921.1|
hypothetical protein EUTSA_v10013991mg [Eutrema
salsugineum]
Length = 348
Score = 167 bits (424), Expect = 2e-39
Identities = 96/200 (48%), Positives = 128/200 (64%), Gaps = 32/200 (16%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFSG-CENCV 357
MDL++FRS + ++GVDVWT+ID AI VAS D+ EL+ RRD IV++LYATS + C NC
Sbjct: 1 MDLDDFRSIMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 356 KQSH---------EMNSRIVES--------------EKNVTPIEEDE--------EDEQR 270
S +N RI E EK+V ++D+ +DEQ+
Sbjct: 61 FGSGGIVTEAAVARVNGRIHEETEEEEGEAAEEEVREKSVNGDDDDDFDPFAGLFDDEQK 120
Query: 269 KILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQVRRLV 90
ILEIK L+D ++E+L+ELLQ L DM+ TF+AL+ET+IGRHV ++RKH S VRRL
Sbjct: 121 SILEIKERLEDPDLSEEALVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLA 180
Query: 89 KILVRKWKDTVDEWVRQNTP 30
K LV+KWK+TVDEWV+ N P
Sbjct: 181 KQLVKKWKETVDEWVKFNQP 200
>ref|XP_006288046.1| hypothetical protein CARUB_v10001280mg [Capsella rubella]
gi|482556752|gb|EOA20944.1| hypothetical protein
CARUB_v10001280mg [Capsella rubella]
Length = 355
Score = 166 bits (420), Expect = 5e-39
Identities = 93/203 (45%), Positives = 129/203 (63%), Gaps = 35/203 (17%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFSG-CENCV 357
MDL++FRS + ++GVDVWT+ID AI VAS D+ EL+ RRD IV++LYATS + C NC
Sbjct: 1 MDLDDFRSIMENAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 356 --------------------KQSHEMNSRIVES------EKNVTPIEEDE--------ED 279
+++ E +V + EK+V ++D+ +D
Sbjct: 61 FGGGGTVTEAAVGRVNGRVHEETEEEEEEVVAAAGDEVREKSVNGEDDDDFDPFAGLFDD 120
Query: 278 EQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQVR 99
EQ+ ILEIK L+D ++ESL++LLQ L DM+ TF+AL+ET+IGRHV ++RKH S VR
Sbjct: 121 EQKSILEIKERLEDPDLSEESLVDLLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVR 180
Query: 98 RLVKILVRKWKDTVDEWVRQNTP 30
RL K LV+KWK+TVDEWV+ N P
Sbjct: 181 RLAKQLVKKWKETVDEWVKFNQP 203
>ref|NP_568218.1| transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana] gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName:
Full=Probable mediator of RNA polymerase II
transcription subunit 26c gi|332004072|gb|AED91455.1|
transcription elongation factor (TFIIS) family protein
[Arabidopsis thaliana]
Length = 353
Score = 165 bits (418), Expect = 8e-39
Identities = 94/205 (45%), Positives = 123/205 (60%), Gaps = 37/205 (18%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFSG-CENC- 360
MDL++FRS + ++GVDVWT+ID AI VAS D+ EL+ RRD IV++LYATS + C NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 359 --------------VKQSHEMNSRIVESEKNVTPIEEDE--------------------- 285
V E E+ VT E+E
Sbjct: 61 FGGGGNVTEAAIGRVNNGRVHEETEEEDEEGVTAAAEEEVREKSVNVEDDDDFDPFAGLF 120
Query: 284 EDEQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQ 105
+DEQ+ I+EIK L+D ++ESL+ELLQ L DM+ TF+AL+ET+IGRHV ++RKH S
Sbjct: 121 DDEQKSIVEIKEKLEDPDLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNN 180
Query: 104 VRRLVKILVRKWKDTVDEWVRQNTP 30
VRRL K LV+KWK+TVDEWV+ N P
Sbjct: 181 VRRLAKQLVKKWKETVDEWVKFNQP 205
>dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
Length = 361
Score = 165 bits (418), Expect = 8e-39
Identities = 94/205 (45%), Positives = 123/205 (60%), Gaps = 37/205 (18%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFSG-CENC- 360
MDL++FRS + ++GVDVWT+ID AI VAS D+ EL+ RRD IV++LYATS + C NC
Sbjct: 1 MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCD 60
Query: 359 --------------VKQSHEMNSRIVESEKNVTPIEEDE--------------------- 285
V E E+ VT E+E
Sbjct: 61 FGGGGNVTEAAIGRVNNGRVHEETEEEDEEGVTAAAEEEVREKSVNVEDDDDFDPFAGLF 120
Query: 284 EDEQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSEQ 105
+DEQ+ I+EIK L+D ++ESL+ELLQ L DM+ TF+AL+ET+IGRHV ++RKH S
Sbjct: 121 DDEQKSIVEIKEKLEDPDLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNN 180
Query: 104 VRRLVKILVRKWKDTVDEWVRQNTP 30
VRRL K LV+KWK+TVDEWV+ N P
Sbjct: 181 VRRLAKQLVKKWKETVDEWVKFNQP 205
>ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X3 [Glycine max]
Length = 359
Score = 164 bits (416), Expect = 1e-38
Identities = 91/204 (44%), Positives = 126/204 (61%), Gaps = 38/204 (18%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFS--GCENC 360
MDL++FRS + +GVDVW +ID AIAVAS+D EL+ RRD IV++LYA + + C C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 359 VKQSHEMNSRIVESEKNVTP-----------------------IEEDE------------ 285
+++N ++ + + +P +E D
Sbjct: 61 DDGGNDLNGHQIKKQSSPSPERQPHQRRAAAIAAAASPATPQSLENDNDGEEDLDPYGGL 120
Query: 284 -EDEQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSE 108
+DEQ+KILEIK L++ Q+++SL+ELLQ L DM+ TF+ALKET+IGRHV +LRKH S
Sbjct: 121 FDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLRKHPSN 180
Query: 107 QVRRLVKILVRKWKDTVDEWVRQN 36
VRRLVK+LVRKWK+ VDEWV+ N
Sbjct: 181 DVRRLVKLLVRKWKEIVDEWVKLN 204
>ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X2 [Glycine max]
Length = 360
Score = 164 bits (416), Expect = 1e-38
Identities = 91/204 (44%), Positives = 126/204 (61%), Gaps = 38/204 (18%)
Frame = -2
Query: 533 MDLEEFRSFISDSGVDVWTWIDMAIAVASSDHEIELRNRRDKIVQKLYATSFS--GCENC 360
MDL++FRS + +GVDVW +ID AIAVAS+D EL+ RRD IV++LYA + + C C
Sbjct: 1 MDLDDFRSVLDTAGVDVWMFIDAAIAVASADSAGELKRRRDGIVERLYAATAATPKCRIC 60
Query: 359 VKQSHEMNSRIVESEKNVTP-----------------------IEEDE------------ 285
+++N ++ + + +P +E D
Sbjct: 61 DDGGNDLNGHQIKKQSSPSPERQPHQRRAAAIAAAASPATPQSLENDNDGEEDLDPYGGL 120
Query: 284 -EDEQRKILEIKNLLDDHSQNDESLIELLQMLLDMNTTFKALKETEIGRHVTKLRKHSSE 108
+DEQ+KILEIK L++ Q+++SL+ELLQ L DM+ TF+ALKET+IGRHV +LRKH S
Sbjct: 121 FDDEQKKILEIKEQLEEPDQSEDSLVELLQSLADMDITFQALKETDIGRHVNRLRKHPSN 180
Query: 107 QVRRLVKILVRKWKDTVDEWVRQN 36
VRRLVK+LVRKWK+ VDEWV+ N
Sbjct: 181 DVRRLVKLLVRKWKEIVDEWVKLN 204