BLASTX nr result
ID: Mentha25_contig00051585
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00051585
(755 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ... 62 7e-11
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo... 72 2e-10
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G... 72 2e-10
gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc... 65 2e-08
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 63 1e-07
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 60 1e-06
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 60 1e-06
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th... 60 1e-06
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 60 1e-06
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 60 1e-06
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 60 1e-06
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 59 2e-06
ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255... 59 2e-06
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 59 2e-06
emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera] 59 2e-06
gb|ACN32036.1| unknown [Zea mays] 58 3e-06
gb|ACL54615.1| unknown [Zea mays] 58 3e-06
ref|XP_006487873.1| PREDICTED: uncharacterized protein LOC102612... 58 4e-06
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 58 4e-06
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 58 4e-06
>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268350|emb|CAB78643.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 1942
Score = 62.0 bits (149), Expect(2) = 7e-11
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Frame = -3
Query: 612 CQLCGRTGHVAIKCFKRFDIHFTGIDXXXXXXXXXXXXXXXXXXXXXXXXPQAFMADYSG 433
CQ+CG+ GH A+ C+ RFD + PQA A
Sbjct: 250 CQICGKHGHHALNCWHRFDNSYQ-----------------------LDVLPQALPATQIT 286
Query: 432 SVEGGAGVYSDHEGN-WYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
+ +DH G+ W DS AT HITN +L + Y G +S+MVGNGN +PI+ G
Sbjct: 287 DI-------TDHSGSEWVTDSAATAHITNSPRHLQQTKSYAGSDSVMVGNGNFLPITHTG 339
Score = 31.6 bits (70), Expect(2) = 7e-11
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = -1
Query: 257 DKGTHKILLEGSLTNGLYQLD---LCHFLSKQQVSST 156
DK T K+LL+GS +GLY LD L F S +QV+++
Sbjct: 367 DKETKKLLLQGSNRDGLYVLDEPKLLVFYSSRQVAAS 403
Score = 53.1 bits (126), Expect(2) = 3e-08
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = -3
Query: 405 SDHEGN-WYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
+DH G+ W DS AT HITN +L + Y G +S+MVGNGN +PI+ G
Sbjct: 1189 TDHSGSEWVTDSAATAHITNSPRHLQQTKSYAGSDSVMVGNGNFLPITHTG 1239
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = -1
Query: 257 DKGTHKILLEGSLTNGLYQLD---LCHFLSKQQVSST 156
DK T K+LL+GS +GLY LD L F S +QV+++
Sbjct: 1267 DKETKKLLLQGSNRDGLYVLDEPKLLVFYSSRQVAAS 1303
>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 72.0 bits (175), Expect = 2e-10
Identities = 40/120 (33%), Positives = 55/120 (45%)
Frame = -3
Query: 612 CQLCGRTGHVAIKCFKRFDIHFTGIDXXXXXXXXXXXXXXXXXXXXXXXXPQAFMADYSG 433
CQLC + GH +KC+KRFD FTG + A + Y
Sbjct: 154 CQLCDKLGHTVVKCYKRFDASFTGEEKSAA----------------------AATSSY-- 189
Query: 432 SVEGGAGVYSDHEGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQ 253
G G NWY+D+GAT HIT+D L + YNGG+ + +G+ + I+ IGQ
Sbjct: 190 ----GVGT------NWYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGMKINQIGQ 239
>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 572
Score = 72.0 bits (175), Expect = 2e-10
Identities = 40/120 (33%), Positives = 55/120 (45%)
Frame = -3
Query: 612 CQLCGRTGHVAIKCFKRFDIHFTGIDXXXXXXXXXXXXXXXXXXXXXXXXPQAFMADYSG 433
CQLC + GH +KC+KRFD FTG + A + Y
Sbjct: 227 CQLCDKLGHTVVKCYKRFDASFTGEEKSAA----------------------AATSSY-- 262
Query: 432 SVEGGAGVYSDHEGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQ 253
G G NWY+D+GAT HIT+D L + YNGG+ + +G+ + I+ IGQ
Sbjct: 263 ----GVGT------NWYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGMKINQIGQ 312
>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 358
Score = 65.5 bits (158), Expect = 2e-08
Identities = 34/121 (28%), Positives = 52/121 (42%)
Frame = -3
Query: 615 VCQLCGRTGHVAIKCFKRFDIHFTGIDXXXXXXXXXXXXXXXXXXXXXXXXPQAFMADYS 436
+CQLCG+ GH +KC+KRFD ++G +
Sbjct: 222 ICQLCGKIGHTVVKCWKRFDTSYSGEEK-------------------------------- 249
Query: 435 GSVEGGAGVYSDHEGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
SV Y + NWY+D+GAT HIT + L + Y GG+ + +G + I +G
Sbjct: 250 -SVAAATNSYGV-DTNWYIDTGATDHITGELEKLTVRDKYTGGDQVHTASGTGMGIDHVG 307
Query: 255 Q 253
+
Sbjct: 308 R 308
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 63.2 bits (152), Expect = 1e-07
Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = -3
Query: 612 CQLCGRTGHVAIKCFKRFDIHFTGIDXXXXXXXXXXXXXXXXXXXXXXXXPQAFMADYSG 433
CQLCG+ GH KC+KRFD FTG D
Sbjct: 194 CQLCGKIGHTVHKCWKRFDASFTGEDK--------------------------------- 220
Query: 432 SVEGGAGVYSDHEGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGN-VVPISSIG 256
S A Y + + NWY+DSGAT HIT++ L + Y G + + +G+ V I
Sbjct: 221 SANVAASSY-EVDTNWYIDSGATDHITSELDKLTVKDKYAGNDQVHTASGSGVAQIGGSA 279
Query: 255 QGNS 244
G+S
Sbjct: 280 TGSS 283
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 59.7 bits (143), Expect = 1e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -3
Query: 390 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 295 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 339
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 59.7 bits (143), Expect = 1e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -3
Query: 390 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 330 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 374
>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
Length = 847
Score = 59.7 bits (143), Expect = 1e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -3
Query: 390 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 295 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 339
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 59.7 bits (143), Expect = 1e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -3
Query: 390 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 325 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 369
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 59.7 bits (143), Expect = 1e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -3
Query: 390 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 330 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 374
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 59.7 bits (143), Expect = 1e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Frame = -3
Query: 390 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
NW +DSGAT HIT+DF+NL++ Y GG+ +MV +G+ +PIS G
Sbjct: 330 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTG 374
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 58.9 bits (141), Expect = 2e-06
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = -3
Query: 399 HEGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
+ GNW +DSGAT H+T+D +NLA+ YNGGE + + +G+ +PIS G
Sbjct: 329 NSGNWLLDSGATHHLTSDLNNLALHQPYNGGEEVTIADGSGLPISHSG 376
>ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255439 [Solanum
lycopersicum]
Length = 318
Score = 58.5 bits (140), Expect = 2e-06
Identities = 35/123 (28%), Positives = 58/123 (47%)
Frame = -3
Query: 615 VCQLCGRTGHVAIKCFKRFDIHFTGIDXXXXXXXXXXXXXXXXXXXXXXXXPQAFMADYS 436
+CQ+C + H+A C+ R++ + + QA +A S
Sbjct: 213 LCQICEKLDHLAKNCYNRYNDQYPPTNTPRP---------------------QANVATSS 251
Query: 435 GSVEGGAGVYSDHEGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIG 256
+ + +W +DSGAT H+T D NL+I+SDY+G +SL VGNG+ + I+ G
Sbjct: 252 SAFL---------DPSWCLDSGATNHVTADVGNLSIASDYSGNDSLAVGNGSQLHITHFG 302
Query: 255 QGN 247
+
Sbjct: 303 SSS 305
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 58.5 bits (140), Expect = 2e-06
Identities = 22/48 (45%), Positives = 35/48 (72%)
Frame = -3
Query: 390 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 247
NW +DSGAT HIT+DF+NL++ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMIADGSTIPITHTGSAS 375
>emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]
Length = 722
Score = 58.5 bits (140), Expect = 2e-06
Identities = 34/108 (31%), Positives = 52/108 (48%)
Frame = -3
Query: 621 ILVCQLCGRTGHVAIKCFKRFDIHFTGIDXXXXXXXXXXXXXXXXXXXXXXXXPQAFMAD 442
++V ++C + H+A+KC+ +FD+ + G + QA+MA
Sbjct: 264 LVVHEVCRKLVHIALKCYHQFDLSYQGQEAAANANSANTSSTTYTNL-------QAYMAA 316
Query: 441 YSGSVEGGAGVYSDHEGNWYVDSGATTHITNDFSNLAISSDYNGGESL 298
S + +W++DSGAT HIT D SNLA +DYNG E L
Sbjct: 317 PSSG--------DPNNNSWFLDSGATHHITTDSSNLASKNDYNGKEKL 356
>gb|ACN32036.1| unknown [Zea mays]
Length = 376
Score = 58.2 bits (139), Expect = 3e-06
Identities = 33/110 (30%), Positives = 46/110 (41%)
Frame = -3
Query: 612 CQLCGRTGHVAIKCFKRFDIHFTGIDXXXXXXXXXXXXXXXXXXXXXXXXPQAFMADYSG 433
CQ+CG+ H A++C+ RFD QA+ A+ +
Sbjct: 285 CQICGKGNHNALQCWHRFD--------------------------------QAYQAESTV 312
Query: 432 SVEGGAGVYSDHEGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNG 283
A + NWY+DSGAT HIT+D L Y GG+ + V NG
Sbjct: 313 KQAAAATHEYAVDPNWYMDSGATDHITSDLERLTTRERYTGGDKIQVANG 362
>gb|ACL54615.1| unknown [Zea mays]
Length = 376
Score = 58.2 bits (139), Expect = 3e-06
Identities = 33/110 (30%), Positives = 46/110 (41%)
Frame = -3
Query: 612 CQLCGRTGHVAIKCFKRFDIHFTGIDXXXXXXXXXXXXXXXXXXXXXXXXPQAFMADYSG 433
CQ+CG+ H A++C+ RFD QA+ A+ +
Sbjct: 285 CQICGKGNHNALQCWHRFD--------------------------------QAYQAESTV 312
Query: 432 SVEGGAGVYSDHEGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNG 283
A + NWY+DSGAT HIT+D L Y GG+ + V NG
Sbjct: 313 KQAAAATHEYAVDPNWYMDSGATDHITSDLERLTTRERYTGGDKIQVANG 362
>ref|XP_006487873.1| PREDICTED: uncharacterized protein LOC102612406 [Citrus sinensis]
Length = 230
Score = 57.8 bits (138), Expect = 4e-06
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = -3
Query: 453 FMADYSGSVEGGAGVYSDH---EGNWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNG 283
F DYSG V + + WY+DSGAT HITND L Y+G E L+VGNG
Sbjct: 132 FTGDYSGCSPSAPTVPTPEMVEDPTWYIDSGATNHITNDAGKLLEPKSYSGSEKLLVGNG 191
Query: 282 NVVPISSIG 256
+ + I +G
Sbjct: 192 SSLHIKQVG 200
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 57.8 bits (138), Expect = 4e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -3
Query: 390 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 247
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375
>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 57.8 bits (138), Expect = 4e-06
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = -3
Query: 390 NWYVDSGATTHITNDFSNLAISSDYNGGESLMVGNGNVVPISSIGQGN 247
NW +DSGAT HIT+DF+NL+ Y GG+ +M+ +G+ +PI+ G +
Sbjct: 328 NWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSAS 375