BLASTX nr result

ID: Mentha25_contig00048391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00048391
         (521 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37145.1| hypothetical protein MIMGU_mgv1a000931mg [Mimulus...    91   2e-16
ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containi...    57   2e-06

>gb|EYU37145.1| hypothetical protein MIMGU_mgv1a000931mg [Mimulus guttatus]
          Length = 939

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 53/97 (54%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
 Frame = +3

Query: 240 MASLKLLISPDNSSF-EIKKLNYPFNSFGFASNALFSGFLSTNG-ALFFKPLCKLKHVRV 413
           MASLKL + P+ +SF E KKL      F FAS+ LFSG+ STNG AL  KP C+LKH+RV
Sbjct: 1   MASLKLSVYPEQNSFHESKKLTSAVIPFKFASSVLFSGYFSTNGGALIVKPFCELKHIRV 60

Query: 414 SRLENEFLDKSESKLDDDWTD--KKNVDGDDDNLVLE 518
           S+L +EFLD S+S LD    D  +K VD  DDNL+++
Sbjct: 61  SKLRDEFLDTSDSILDGYSIDNLEKCVDAADDNLIVQ 97


>ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565353364|ref|XP_006343602.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 937

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/93 (40%), Positives = 50/93 (53%)
 Frame = +3

Query: 240 MASLKLLISPDNSSFEIKKLNYPFNSFGFASNALFSGFLSTNGALFFKPLCKLKHVRVSR 419
           MASLKL +  D SS+E KKLN    +  F  +  +       GA    P C LKH+RVSR
Sbjct: 1   MASLKLPLYVD-SSWESKKLNCTVKALNFTDSKCWVPSFLGGGAFVVSPFCNLKHIRVSR 59

Query: 420 LENEFLDKSESKLDDDWTDKKNVDGDDDNLVLE 518
           LE E L+ SE  LD++  D    +  +D+ V E
Sbjct: 60  LETEELETSELSLDNEGVDGFEGELGNDSFVTE 92


>ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Solanum lycopersicum]
          Length = 1201

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/97 (39%), Positives = 50/97 (51%)
 Frame = +3

Query: 228 PL*SMASLKLLISPDNSSFEIKKLNYPFNSFGFASNALFSGFLSTNGALFFKPLCKLKHV 407
           PL  MASLKL +  D SS+E KKLN       F  +          GA    P C LKH+
Sbjct: 261 PLCLMASLKLPLYVD-SSWESKKLNCTVKPLIFTDSKCCVPSFLGGGAFVVSPFCNLKHI 319

Query: 408 RVSRLENEFLDKSESKLDDDWTDKKNVDGDDDNLVLE 518
           RVSRLE E L+ SE  +D++  D    +  +++ V E
Sbjct: 320 RVSRLETEELETSELSIDNEGVDGFEGELGNESFVTE 356


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