BLASTX nr result
ID: Mentha25_contig00048209
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00048209
(400 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 193 2e-47
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 191 1e-46
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 187 1e-45
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 186 4e-45
gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus... 181 9e-44
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 180 2e-43
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 174 1e-41
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 173 3e-41
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 172 4e-41
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 171 1e-40
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 169 3e-40
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 167 1e-39
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 166 3e-39
gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlise... 166 3e-39
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 166 3e-39
ref|XP_006836643.1| hypothetical protein AMTR_s00088p00026960 [A... 166 4e-39
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 165 5e-39
ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, part... 165 7e-39
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 164 9e-39
ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis ... 163 3e-38
>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 193 bits (491), Expect = 2e-47
Identities = 99/132 (75%), Positives = 107/132 (81%)
Frame = +1
Query: 4 MLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQP 183
MLQS+LENQISD+RSRCRIFVPKGRVL GCLDESGTLEYGQV+ R+TM AELE GDQP
Sbjct: 706 MLQSYLENQISDIRSRCRIFVPKGRVLVGCLDESGTLEYGQVFVRLTMNTAELE-GGDQP 764
Query: 184 FFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYVFPQKGHRPH 363
FFQRVDETT+ILRGKVVVTKNP LHPGDV L+ + + VFPQKG RPH
Sbjct: 765 FFQRVDETTSILRGKVVVTKNPCLHPGDVRVLEAVYDIKLQEDNM-VDCLVFPQKGERPH 823
Query: 364 PNECSGGDLDGD 399
PNECSGGDLDGD
Sbjct: 824 PNECSGGDLDGD 835
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
Length = 1119
Score = 191 bits (484), Expect = 1e-46
Identities = 95/137 (69%), Positives = 110/137 (80%), Gaps = 4/137 (2%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQSH ENQISDLRSRCRIF+PKGR+L GCLDE+G L+YGQVY R+TMTKAEL+ +G Q
Sbjct: 698 MMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGQVYVRITMTKAELQ-NGQQ 756
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYV----FPQK 348
FFQ+VDETTA++RGKVVVTKNP LHPGDV L+ + + L ++V FPQK
Sbjct: 757 NFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLE-----AVYEVTLEEKTWVDCIIFPQK 811
Query: 349 GHRPHPNECSGGDLDGD 399
G RPHPNECSGGDLDGD
Sbjct: 812 GERPHPNECSGGDLDGD 828
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 187 bits (476), Expect = 1e-45
Identities = 93/137 (67%), Positives = 109/137 (79%), Gaps = 4/137 (2%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQSH ENQISDLRSRCRIF+PKGR+L GCLDE+G L+YG+VY R+TMTKAEL+ +G Q
Sbjct: 698 MMLQSHFENQISDLRSRCRIFIPKGRILVGCLDETGILKYGEVYVRITMTKAELQ-NGQQ 756
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYV----FPQK 348
FFQ+VDETTA++RGKVVVTKNP LHPGDV L+ + + L ++V FPQ
Sbjct: 757 NFFQKVDETTAVVRGKVVVTKNPCLHPGDVRVLE-----AVYEVTLEEKTWVDCIIFPQN 811
Query: 349 GHRPHPNECSGGDLDGD 399
G RPHPNECSGGDLDGD
Sbjct: 812 GERPHPNECSGGDLDGD 828
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 186 bits (471), Expect = 4e-45
Identities = 94/137 (68%), Positives = 108/137 (78%), Gaps = 4/137 (2%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQSH ENQ+SDLRSRCRIF+ KGRVL GCLDE+G L YGQVYAR+TMTKAEL+S+ Q
Sbjct: 699 MMLQSHFENQLSDLRSRCRIFIHKGRVLVGCLDETGILNYGQVYARITMTKAELQSA-QQ 757
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYV----FPQK 348
FFQ+VDETTA++RG VVVTKNP LHPGDV L+ + + L ++V FPQK
Sbjct: 758 SFFQKVDETTAVVRGNVVVTKNPCLHPGDVRVLE-----AVYEVALEEKAWVDCIIFPQK 812
Query: 349 GHRPHPNECSGGDLDGD 399
G RPHPNECSGGDLDGD
Sbjct: 813 GERPHPNECSGGDLDGD 829
>gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus guttatus]
Length = 1135
Score = 181 bits (459), Expect = 9e-44
Identities = 93/133 (69%), Positives = 105/133 (78%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MML+SHLENQ+SDLRSR RIFVPKGRVL G LDE+G LEYGQVY R+TMT +E+E SG+Q
Sbjct: 705 MMLKSHLENQLSDLRSRGRIFVPKGRVLVGVLDETGNLEYGQVYVRITMTMSEIE-SGNQ 763
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYVFPQKGHRP 360
FF R+DETTA+L+GKVVVTKNP LHPGDV L+ + L VFPQKG RP
Sbjct: 764 RFFHRIDETTAVLKGKVVVTKNPCLHPGDVRVLEAVLDVKLQENNL-VDCLVFPQKGDRP 822
Query: 361 HPNECSGGDLDGD 399
HPNECSGGDLDGD
Sbjct: 823 HPNECSGGDLDGD 835
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 180 bits (456), Expect = 2e-43
Identities = 91/137 (66%), Positives = 105/137 (76%), Gaps = 4/137 (2%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQ++ EN +SDL+SRCRIFVPKGRVL GCLDE+G L+YGQVY R+TMTKAE E GDQ
Sbjct: 697 MMLQAYYENHLSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQE-MGDQ 755
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYV----FPQK 348
FFQ+VDETT ++ GKVVVTKNP LHPGDV L + ++L + V FPQK
Sbjct: 756 SFFQKVDETTLVVTGKVVVTKNPCLHPGDVRVLD-----AVYDVVLEEKNMVDCLIFPQK 810
Query: 349 GHRPHPNECSGGDLDGD 399
G RPHPNECSGGDLDGD
Sbjct: 811 GERPHPNECSGGDLDGD 827
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 174 bits (440), Expect = 1e-41
Identities = 88/133 (66%), Positives = 104/133 (78%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MM+QS+ ENQ+SDL++RCRIFVPKG+VL GCLDE+G LEYGQVY R+TM KAELE +G+Q
Sbjct: 694 MMIQSYYENQLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAELE-AGNQ 752
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYVFPQKGHRP 360
FF++VD+ T+I+ GKVVVTKNP LHPGDV L+ L VFPQKG RP
Sbjct: 753 SFFRKVDDETSIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEEEGL-VDCLVFPQKGERP 811
Query: 361 HPNECSGGDLDGD 399
HPNECSGGDLDGD
Sbjct: 812 HPNECSGGDLDGD 824
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
vesca]
Length = 1136
Score = 173 bits (438), Expect = 3e-41
Identities = 86/134 (64%), Positives = 104/134 (77%), Gaps = 1/134 (0%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQ+H E+ ++DL+SRCR++VPKGR+L GCLDE+GTL YGQVY R+TMTKAE E G Q
Sbjct: 699 MMLQAHYEHHLADLKSRCRMYVPKGRILVGCLDETGTLNYGQVYLRITMTKAEQE-MGHQ 757
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLK-LYTT*SCRRIILSTASYVFPQKGHR 357
FFQRVDE T I+ GKVVVTKNP LHPGD+ L+ +Y + ++ +FPQKG R
Sbjct: 758 SFFQRVDEATCIVTGKVVVTKNPCLHPGDIRVLEAVYDVGLEEKNMVD--CILFPQKGER 815
Query: 358 PHPNECSGGDLDGD 399
PHPNECSGGDLDGD
Sbjct: 816 PHPNECSGGDLDGD 829
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 172 bits (436), Expect = 4e-41
Identities = 88/137 (64%), Positives = 103/137 (75%), Gaps = 4/137 (2%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MML SH ENQ+SDL+SRCRI+VPKGR+L GC DE+G L YGQV+ RVTMT+ ELES DQ
Sbjct: 712 MMLLSHHENQLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESK-DQ 770
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYV----FPQK 348
FF RVD+ T+I++GKV+VTKNP LHPGDV L+ + + L YV FPQK
Sbjct: 771 SFFHRVDDKTSIVKGKVLVTKNPCLHPGDVRVLE-----AVYEMKLEEKDYVDCIIFPQK 825
Query: 349 GHRPHPNECSGGDLDGD 399
G RPHPNECSGGDLDGD
Sbjct: 826 GERPHPNECSGGDLDGD 842
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 171 bits (432), Expect = 1e-40
Identities = 88/133 (66%), Positives = 100/133 (75%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQ+H EN +SDL+SRCRIFVPKGR+L GCLDE+GTL YGQVY + M KAELE + DQ
Sbjct: 696 MMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELECA-DQ 754
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYVFPQKGHRP 360
+F++VDE TAI+ GKVVVTKNP LHPGDV L+ L VFPQKG RP
Sbjct: 755 SYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGL-VDCLVFPQKGERP 813
Query: 361 HPNECSGGDLDGD 399
HPNECSGGDLDGD
Sbjct: 814 HPNECSGGDLDGD 826
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 169 bits (429), Expect = 3e-40
Identities = 87/133 (65%), Positives = 100/133 (75%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQ+H EN +SDL+SRCRIFVPKGR+L GCLDE+GTL YGQVY + M KAELE + DQ
Sbjct: 696 MMLQAHYENLLSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELECA-DQ 754
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYVFPQKGHRP 360
+F++VDE TAI+ GKVVVTKNP LHPGDV L+ L VFP+KG RP
Sbjct: 755 SYFRKVDEETAIVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGL-VDCLVFPEKGERP 813
Query: 361 HPNECSGGDLDGD 399
HPNECSGGDLDGD
Sbjct: 814 HPNECSGGDLDGD 826
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA
polymerase, putative [Ricinus communis]
Length = 983
Score = 167 bits (423), Expect = 1e-39
Identities = 84/133 (63%), Positives = 100/133 (75%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQ++ EN + +LRSRCRIFVPKGR+L GCLDE+ L+YGQVY R+TMTKAEL+ + DQ
Sbjct: 546 MMLQAYHENLLVELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQDA-DQ 604
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYVFPQKGHRP 360
F RVDETTA++ GKV+VTKNP LHPGD+ L+ L +FPQKG RP
Sbjct: 605 ASFHRVDETTAVVTGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGL-VDCILFPQKGERP 663
Query: 361 HPNECSGGDLDGD 399
HPNECSGGDLDGD
Sbjct: 664 HPNECSGGDLDGD 676
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 166 bits (420), Expect = 3e-39
Identities = 84/134 (62%), Positives = 103/134 (76%), Gaps = 1/134 (0%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MML+ H E+Q+S+L+SRCRI VPKGR+L GC+DE G LEYGQVY RVT+TKAELES +Q
Sbjct: 702 MMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELESR-EQ 760
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFL-KLYTT*SCRRIILSTASYVFPQKGHR 357
+F ++DE T+++ GKVVVTKNP LHPGD+ L +Y ++ L VFPQKG R
Sbjct: 761 GYFHKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEISFEQKGFLD--CIVFPQKGER 818
Query: 358 PHPNECSGGDLDGD 399
PHPNECSGGDLDGD
Sbjct: 819 PHPNECSGGDLDGD 832
>gb|EPS65825.1| hypothetical protein M569_08951, partial [Genlisea aurea]
Length = 1094
Score = 166 bits (420), Expect = 3e-39
Identities = 85/136 (62%), Positives = 102/136 (75%), Gaps = 3/136 (2%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MML+S+LENQI+DLR+RCR+FVPKGRVL G LDE G LEYGQVY RVTM K+E+ Q
Sbjct: 679 MMLRSYLENQIADLRTRCRVFVPKGRVLLGVLDEFGRLEYGQVYVRVTMNKSEVGEK--Q 736
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILS---TASYVFPQKG 351
P+F+ VD ++++ GKVV+TKNP LHPGDV L+ C ++S VFPQKG
Sbjct: 737 PYFRSVDGNSSVVVGKVVITKNPCLHPGDVRVLEAV----CDPELVSENLVDCLVFPQKG 792
Query: 352 HRPHPNECSGGDLDGD 399
HRPHPNECSGGDLDGD
Sbjct: 793 HRPHPNECSGGDLDGD 808
>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
AltName: Full=RNA-directed RNA polymerase 2
gi|3600048|gb|AAC35535.1| similar to hypothetical
proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
2 [Arabidopsis thaliana]
Length = 1133
Score = 166 bits (420), Expect = 3e-39
Identities = 83/134 (61%), Positives = 103/134 (76%), Gaps = 1/134 (0%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MML+ H E+Q+S+L+SRCRI VPKGR+L GC+DE G LEYGQVY RVT+TKAEL+S DQ
Sbjct: 704 MMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSR-DQ 762
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFL-KLYTT*SCRRIILSTASYVFPQKGHR 357
+F+++DE T+++ GKVVVTKNP LHPGD+ L +Y + L +FPQKG R
Sbjct: 763 SYFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLD--CIIFPQKGER 820
Query: 358 PHPNECSGGDLDGD 399
PHPNECSGGDLDGD
Sbjct: 821 PHPNECSGGDLDGD 834
>ref|XP_006836643.1| hypothetical protein AMTR_s00088p00026960 [Amborella trichopoda]
gi|548839203|gb|ERM99496.1| hypothetical protein
AMTR_s00088p00026960 [Amborella trichopoda]
Length = 1107
Score = 166 bits (419), Expect = 4e-39
Identities = 85/135 (62%), Positives = 103/135 (76%), Gaps = 2/135 (1%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQ+ ++Q+SD+RS+CR+FV KGRVL GCLDESGTL G+V+ RVTMTKAELE+ G Q
Sbjct: 689 MMLQALRDHQLSDIRSKCRLFVSKGRVLLGCLDESGTLSQGEVFLRVTMTKAELENDG-Q 747
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILS--TASYVFPQKGH 354
PFF+R+DETT+++ G VVVTKNP LHPGDV L+ S ++ VFPQ G
Sbjct: 748 PFFERIDETTSVVVGAVVVTKNPCLHPGDVRVLQAV---SGLELVDQGMVDCLVFPQNGE 804
Query: 355 RPHPNECSGGDLDGD 399
RPHPNECSGGDLDGD
Sbjct: 805 RPHPNECSGGDLDGD 819
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 165 bits (418), Expect = 5e-39
Identities = 83/133 (62%), Positives = 99/133 (74%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQ++ E+Q+SD+R+RCRIFVPK RVL GCLDE+G L YGQVY RVTMTKAE +Q
Sbjct: 696 MMLQAYRESQLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAE-HKCRNQ 754
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYVFPQKGHRP 360
FFQ+VD+TT+++ GKV+VTKNP LHPGD+ L L +FPQKG RP
Sbjct: 755 SFFQKVDDTTSVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEKGL-VDCILFPQKGERP 813
Query: 361 HPNECSGGDLDGD 399
HPNECSGGDLDGD
Sbjct: 814 HPNECSGGDLDGD 826
>ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, partial [Capsella rubella]
gi|482555639|gb|EOA19831.1| hypothetical protein
CARUB_v10000076mg, partial [Capsella rubella]
Length = 1165
Score = 165 bits (417), Expect = 7e-39
Identities = 82/134 (61%), Positives = 103/134 (76%), Gaps = 1/134 (0%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MML+ H E+Q+S+L+SRCRI VPKGR+L GC+DE G LEYGQVY RVT+TKAEL+S +Q
Sbjct: 736 MMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSR-EQ 794
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFL-KLYTT*SCRRIILSTASYVFPQKGHR 357
+F+++DE T+++ GKVVVTKNP LHPGD+ L +Y + L +FPQKG R
Sbjct: 795 SYFKKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVNFEEKGFLD--CIIFPQKGER 852
Query: 358 PHPNECSGGDLDGD 399
PHPNECSGGDLDGD
Sbjct: 853 PHPNECSGGDLDGD 866
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 164 bits (416), Expect = 9e-39
Identities = 82/133 (61%), Positives = 99/133 (74%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MMLQ++ EN + +LRSRCRIFVPKGR+L GCLDESG L+YGQVY R+TMTKAEL+ DQ
Sbjct: 691 MMLQAYHENSLMELRSRCRIFVPKGRILIGCLDESGILDYGQVYVRITMTKAELQCC-DQ 749
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFLKLYTT*SCRRIILSTASYVFPQKGHRP 360
FF++VDE+T+ + G+V VTKNP LHPGD+ L+ L +FPQ G RP
Sbjct: 750 SFFRKVDESTSTIIGEVAVTKNPCLHPGDIRVLEAVYDVELEEKGL-VDCIIFPQNGGRP 808
Query: 361 HPNECSGGDLDGD 399
HPNECSGGDLDGD
Sbjct: 809 HPNECSGGDLDGD 821
>ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297318388|gb|EFH48810.1| RNA-dependent RNA polymerase
2 [Arabidopsis lyrata subsp. lyrata]
Length = 1134
Score = 163 bits (412), Expect = 3e-38
Identities = 81/134 (60%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Frame = +1
Query: 1 MMLQSHLENQISDLRSRCRIFVPKGRVLAGCLDESGTLEYGQVYARVTMTKAELESSGDQ 180
MML+ H E+Q+S+L+SRCRI VPKGR+L GC+DE G LEYGQV+ RVT+TKAEL+S +Q
Sbjct: 705 MMLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVFVRVTLTKAELKSR-EQ 763
Query: 181 PFFQRVDETTAILRGKVVVTKNPRLHPGDVEFL-KLYTT*SCRRIILSTASYVFPQKGHR 357
+F ++DE T+++ GKVVVTKNP LHPGD+ L +Y + L +FPQKG R
Sbjct: 764 SYFHKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAIYEVNFEEKGFLD--CIIFPQKGER 821
Query: 358 PHPNECSGGDLDGD 399
PHPNECSGGDLDGD
Sbjct: 822 PHPNECSGGDLDGD 835