BLASTX nr result

ID: Mentha25_contig00047321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00047321
         (442 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA62892.1| TPA: FAR1-domain family sequence [Zea mays]            62   8e-08
tpg|DAA62893.1| TPA: FAR1-domain family sequence isoform 1 [Zea ...    60   2e-07
dbj|BAK02303.1| predicted protein [Hordeum vulgare subsp. vulgare]     59   5e-07
ref|XP_003561049.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    59   9e-07
ref|XP_002462925.1| hypothetical protein SORBIDRAFT_02g034560 [S...    59   9e-07

>tpg|DAA62892.1| TPA: FAR1-domain family sequence [Zea mays]
          Length = 690

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 10/126 (7%)
 Frame = -3

Query: 440 LCCHILRILHAHSVDQIPQSYIKKRWTKVAKQDLW-----DKSKNSCEKSTKCVPWRHQM 276
           LC H L++    +VD IP+ Y+ KRWTK A++ ++     D ++  C ++   + +R++ 
Sbjct: 566 LCSHALKVFTLQNVDTIPEKYVLKRWTKDARRSMYTLAQDDSTQQECTEAE--LAYRNRA 623

Query: 275 ARRFYNTVLKAQENEDDRLVVEDGFKNITSSLEA-----SMVARQTKDAMQDVEVSSSLM 111
            +  YN ++K+QE E+ R +  D  +    +LE      +M  +  KDA ++V+      
Sbjct: 624 MQYAYNLIIKSQELEESRKIFWDSLETGEKALEVFFEMRNMRTQAAKDADKNVKKKKKTS 683

Query: 110 NVADPS 93
              +PS
Sbjct: 684 KGTNPS 689


>tpg|DAA62893.1| TPA: FAR1-domain family sequence isoform 1 [Zea mays]
           gi|414886880|tpg|DAA62894.1| TPA: FAR1-domain family
           sequence isoform 2 [Zea mays]
          Length = 779

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
 Frame = -3

Query: 440 LCCHILRILHAHSVDQIPQSYIKKRWTKVAKQDLW-----DKSKNSCEKSTKCVPWRHQM 276
           LC H L++    +VD IP+ Y+ KRWTK A++ ++     D ++  C ++   + +R++ 
Sbjct: 566 LCSHALKVFTLQNVDTIPEKYVLKRWTKDARRSMYTLAQDDSTQQECTEAE--LAYRNRA 623

Query: 275 ARRFYNTVLKAQENEDDRLVVEDGFKNITSSLEA-----SMVARQTKDAMQDVEVSSSLM 111
            +  YN ++K+QE E+ R +  D  +    +LE      +M  +  KDA ++V+      
Sbjct: 624 MQYAYNLIIKSQELEESRKIFWDSLETGEKALEVFFEMRNMRTQAAKDADKNVKKKKKTS 683

Query: 110 NVADP 96
              +P
Sbjct: 684 KGTNP 688


>dbj|BAK02303.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 777

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
 Frame = -3

Query: 440 LCCHILRILHAHSVDQIPQSYIKKRWTKVAKQDLW-----DKSKNSCEKSTKCVPWRHQM 276
           LC H ++     +VD +P+ YI KRWTK A++ ++     D ++  C ++   + +R++ 
Sbjct: 567 LCSHAMKAFSLQNVDMVPEKYILKRWTKDARRSMYNPSQEDSTQQECTEAE--LAYRNRA 624

Query: 275 ARRFYNTVLKAQENEDDRLVVEDGFKNITSSLEA-----SMVARQTKDA 144
            +  YN VLK+QE E+ R +  D  +    +LE      S+ A+  KDA
Sbjct: 625 MQYAYNLVLKSQELEEARKIFWDSLETGEKALEVFFEMRSLHAQSAKDA 673


>ref|XP_003561049.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 761

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
 Frame = -3

Query: 440 LCCHILRILHAHSVDQIPQSYIKKRWTKVAKQDLW-----DKSKNSCEKSTKCVPWRHQM 276
           LC H L+     +VD IP+ YI KRWTK A++ ++     D ++  C ++   + +R++ 
Sbjct: 561 LCSHALKAFSLQNVDTIPEKYILKRWTKDARRSMYKLSQEDSTQQECTEAE--LAYRNRA 618

Query: 275 ARRFYNTVLKAQENEDDRLVVEDGFKNITSSLEA-----SMVARQTKDAMQDVEVSSS 117
            +  Y+ ++K+QE E+ R +  D  +    +LE      S+ A+  KDA +  +  SS
Sbjct: 619 MQYAYSLIMKSQELEESRKIFWDSLETGEKALEVFFEIRSLHAQPAKDASKTGKKKSS 676


>ref|XP_002462925.1| hypothetical protein SORBIDRAFT_02g034560 [Sorghum bicolor]
           gi|241926302|gb|EER99446.1| hypothetical protein
           SORBIDRAFT_02g034560 [Sorghum bicolor]
          Length = 781

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
 Frame = -3

Query: 440 LCCHILRILHAHSVDQIPQSYIKKRWTKVAKQDLW-----DKSKNSCEKSTKCVPWRHQM 276
           LC H L++    +VD IP+ Y+ KRWTK A++ ++     D ++  C ++   + +R++ 
Sbjct: 566 LCSHALKVFTLQNVDTIPEKYVLKRWTKDARRSMYTLAQDDSTQQECTEAE--LAYRNRA 623

Query: 275 ARRFYNTVLKAQENEDDRLVVEDGFKNITSSLEA-----SMVARQTKDA 144
            +  YN ++K+QE E+ R +  D  +    +LE      +M  +  KDA
Sbjct: 624 MQYAYNLIIKSQELEESRKIFWDSLETGEKALEVFFEMRNMRTQAAKDA 672


Top