BLASTX nr result
ID: Mentha25_contig00047304
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00047304
(525 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Orig... 175 1e-86
ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) ... 169 1e-80
ref|YP_007353905.1| RNA polymerase beta'' subunit (chloroplast) ... 164 5e-76
gb|ADX99112.1| RNA polymerase beta II subunit [Dipyrena glaberrima] 166 7e-72
gb|ADX99126.1| RNA polymerase beta II subunit [Duranta serratifo... 164 9e-72
gb|ADX99122.1| RNA polymerase beta II subunit [Casselia glaziovii] 165 1e-71
gb|ADX99115.1| RNA polymerase beta II subunit [Diostea juncea] 162 2e-71
gb|ADX99124.1| RNA polymerase beta II subunit [Bouchea fluminensis] 164 2e-71
gb|ADX99121.1| RNA polymerase beta II subunit [Citharexylum ligu... 159 6e-71
gb|ADX99125.1| RNA polymerase beta II subunit [Stachytarpheta ca... 161 2e-70
ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum in... 155 7e-70
gb|ADX99113.1| RNA polymerase beta II subunit [Neosparton ephedr... 157 1e-69
ref|YP_008964024.1| RNA polymerase beta'' subunit [Ajuga reptans... 155 2e-69
gb|ADX99102.1| RNA polymerase beta II subunit [Lippia salviifolia] 158 4e-69
gb|ADX99114.1| RNA polymerase beta II subunit [Lampayo castellani] 157 6e-69
gb|ADX99106.1| RNA polymerase beta II subunit [Xeroaloysia ovati... 155 1e-68
ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) ... 154 2e-68
gb|ADX99103.1| RNA polymerase beta II subunit [Lantana camara] 156 2e-68
gb|ADX99105.1| RNA polymerase beta II subunit [Phyla lanceolata] 158 3e-68
gb|ADX99128.1| RNA polymerase beta II subunit [Petrea volubilis] 166 6e-68
>gb|AFV61804.1| RNA polymerase beta'' subunit (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 1397
Score = 175 bits (444), Expect(2) = 1e-86
Identities = 86/93 (92%), Positives = 88/93 (94%)
Frame = +1
Query: 241 SVFFHLFQIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAI 420
S + +IQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAI
Sbjct: 910 SSIYSKIRIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAI 969
Query: 421 KESIQITKDPVIPIKNLSRPLGTAFLIANVYSF 519
KESIQITKDPVIPIKNLSRPLGTAFLIANVYSF
Sbjct: 970 KESIQITKDPVIPIKNLSRPLGTAFLIANVYSF 1002
Score = 170 bits (431), Expect(2) = 1e-86
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
D NIQLVRTCL+LNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN
Sbjct: 829 DPNIQLVRTCLILNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 888
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DPPGS FL DNGSDCTNINPFSSIYSK
Sbjct: 889 DPPGSAFLSDNGSDCTNINPFSSIYSK 915
>ref|YP_007507101.1| RNA polymerase beta subunit-2 (chloroplast) [Salvia miltiorrhiza]
gi|401879732|gb|AFQ30919.1| RNA polymerase beta subunit-2
(chloroplast) [Salvia miltiorrhiza]
gi|573461941|emb|CCQ71610.1| RNA polymerase beta''
subunit (chloroplast) [Salvia miltiorrhiza]
Length = 1395
Score = 169 bits (427), Expect(2) = 1e-80
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDKKSS SQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN
Sbjct: 829 DTNIQLVRTCLVLNWDQDKKSSYSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 888
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
D PGSGFLP NGSDCTNINPFSSIYSK
Sbjct: 889 DRPGSGFLPANGSDCTNINPFSSIYSK 915
Score = 157 bits (396), Expect(2) = 1e-80
Identities = 80/93 (86%), Positives = 82/93 (88%)
Frame = +1
Query: 241 SVFFHLFQIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAI 420
S + +IQQPLNQN RTIHTLLNRNK FQS IILSSSNCFRMGPF NDVKYHNHNAI
Sbjct: 910 SSIYSKIRIQQPLNQNNRTIHTLLNRNKGFQSSIILSSSNCFRMGPF--NDVKYHNHNAI 967
Query: 421 KESIQITKDPVIPIKNLSRPLGTAFLIANVYSF 519
KESIQITKDPVIPIKNLSRPLGTA LIANVYSF
Sbjct: 968 KESIQITKDPVIPIKNLSRPLGTALLIANVYSF 1000
>ref|YP_007353905.1| RNA polymerase beta'' subunit (chloroplast) [Tectona grandis]
gi|438687594|emb|CCP47120.1| RNA polymerase beta''
subunit (chloroplast) [Tectona grandis]
gi|438688278|emb|CCP47209.1| RNA polymerase beta''
subunit (chloroplast) [Tectona grandis]
gi|438688402|emb|CCP47298.1| RNA polymerase beta''
subunit (chloroplast) [Tectona grandis]
Length = 1395
Score = 164 bits (415), Expect(2) = 5e-76
Identities = 81/87 (93%), Positives = 83/87 (95%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDKKSSSSQEARASFVEIRA+GLIRHFLRIDLLKSTISY GKRN
Sbjct: 831 DTNIQLVRTCLVLNWDQDKKSSSSQEARASFVEIRASGLIRHFLRIDLLKSTISYIGKRN 890
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFSSIYSK
Sbjct: 891 DPSGSGLLLDNGSDCTNINPFSSIYSK 917
Score = 146 bits (368), Expect(2) = 5e-76
Identities = 74/86 (86%), Positives = 77/86 (89%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQPLNQN+RTIHT LNRN FQSLIILSSSNCFRMGPF NDVKYHN+N IKESIQIT
Sbjct: 919 RIQQPLNQNQRTIHTFLNRNTGFQSLIILSSSNCFRMGPF--NDVKYHNYNVIKESIQIT 976
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDPVIPIKN PLGTAFLIANVYSF
Sbjct: 977 KDPVIPIKNSLGPLGTAFLIANVYSF 1002
>gb|ADX99112.1| RNA polymerase beta II subunit [Dipyrena glaberrima]
Length = 701
Score = 166 bits (419), Expect(2) = 7e-72
Identities = 81/87 (93%), Positives = 83/87 (95%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDL+KSTISY GKRN
Sbjct: 192 DTNIQLVRTCLVLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLVKSTISYIGKRN 251
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFSSIYSK
Sbjct: 252 DPSGSGLLSDNGSDCTNINPFSSIYSK 278
Score = 130 bits (328), Expect(2) = 7e-72
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQPLNQN+RT+HTLLNRN FQSLIILSSSNCFRMGP FNDVKY HN +KESI I+
Sbjct: 280 KIQQPLNQNQRTLHTLLNRNTGFQSLIILSSSNCFRMGP--FNDVKY--HNVLKESIPIS 335
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYS 516
KDP+IPIKN PLGTAFLIANVYS
Sbjct: 336 KDPLIPIKNSLGPLGTAFLIANVYS 360
>gb|ADX99126.1| RNA polymerase beta II subunit [Duranta serratifolia]
Length = 678
Score = 164 bits (414), Expect(2) = 9e-72
Identities = 80/87 (91%), Positives = 82/87 (94%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSSQEARASFVEIRANGLIRHFLRIDL+KSTISY GKRN
Sbjct: 169 DTNIQLVRTCLVLNWDQDKNSSSSQEARASFVEIRANGLIRHFLRIDLVKSTISYIGKRN 228
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFSSIYSK
Sbjct: 229 DPSGSGLLSDNGSDCTNINPFSSIYSK 255
Score = 132 bits (332), Expect(2) = 9e-72
Identities = 68/86 (79%), Positives = 75/86 (87%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQP NQN++TIHTLLNRN FQSLIILSS+NCFRMGP FNDVKY HN +KESIQI+
Sbjct: 257 KIQQPFNQNQKTIHTLLNRNTGFQSLIILSSANCFRMGP--FNDVKY--HNVLKESIQIS 312
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKN PLGTAFLIANVYSF
Sbjct: 313 KDPLIPIKNSLGPLGTAFLIANVYSF 338
>gb|ADX99122.1| RNA polymerase beta II subunit [Casselia glaziovii]
Length = 673
Score = 165 bits (418), Expect(2) = 1e-71
Identities = 80/87 (91%), Positives = 83/87 (95%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSSQEARASFVEIRANGLI+HFLRIDL+KSTISY GKRN
Sbjct: 169 DTNIQLVRTCLVLNWDQDKNSSSSQEARASFVEIRANGLIQHFLRIDLVKSTISYIGKRN 228
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DPPGSG L DNGSDCTNINPFSSIYSK
Sbjct: 229 DPPGSGLLSDNGSDCTNINPFSSIYSK 255
Score = 130 bits (327), Expect(2) = 1e-71
Identities = 68/86 (79%), Positives = 75/86 (87%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQ+PLNQN+RTIHTLLNRN F+SLIILSSSNCFRMGPFK DVKY HN +KESIQI+
Sbjct: 257 KIQRPLNQNQRTIHTLLNRNTGFRSLIILSSSNCFRMGPFK--DVKY--HNVLKESIQIS 312
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPI N PLGTAFLIANVYSF
Sbjct: 313 KDPLIPITNSLGPLGTAFLIANVYSF 338
>gb|ADX99115.1| RNA polymerase beta II subunit [Diostea juncea]
Length = 699
Score = 162 bits (411), Expect(2) = 2e-71
Identities = 79/87 (90%), Positives = 82/87 (94%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSQEARASFVEIRANGLIRHFLRIDL+KSTISY GKRN
Sbjct: 190 DTNIQLVRTCLVLNWDQDKNGSSSQEARASFVEIRANGLIRHFLRIDLVKSTISYIGKRN 249
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
+P GSGFL DNGSDCTNINPFSSIYSK
Sbjct: 250 NPSGSGFLSDNGSDCTNINPFSSIYSK 276
Score = 132 bits (333), Expect(2) = 2e-71
Identities = 69/86 (80%), Positives = 75/86 (87%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQP NQN+RT+HTLLNRN FQSLIILSSSNCFRMGP FNDVKY HN +KESIQI+
Sbjct: 278 KIQQPPNQNQRTLHTLLNRNTGFQSLIILSSSNCFRMGP--FNDVKY--HNVLKESIQIS 333
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKN PLGTAFLIANVYSF
Sbjct: 334 KDPLIPIKNSLGPLGTAFLIANVYSF 359
>gb|ADX99124.1| RNA polymerase beta II subunit [Bouchea fluminensis]
Length = 688
Score = 164 bits (414), Expect(2) = 2e-71
Identities = 80/87 (91%), Positives = 82/87 (94%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSSQEARASFVEIRANGLIRHFLRIDL+KSTISY GKRN
Sbjct: 179 DTNIQLVRTCLVLNWDQDKNSSSSQEARASFVEIRANGLIRHFLRIDLVKSTISYIGKRN 238
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFSSIYSK
Sbjct: 239 DPSGSGLLSDNGSDCTNINPFSSIYSK 265
Score = 131 bits (329), Expect(2) = 2e-71
Identities = 69/86 (80%), Positives = 74/86 (86%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQP NQN+RTIHTLLNRN FQSLIILSS+NCFRMGP FNDVKY HN IKESIQI+
Sbjct: 267 KIQQPFNQNQRTIHTLLNRNTGFQSLIILSSANCFRMGP--FNDVKY--HNVIKESIQIS 322
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KD +IPIKN PLGTAFLIANVYSF
Sbjct: 323 KDSLIPIKNSLGPLGTAFLIANVYSF 348
>gb|ADX99121.1| RNA polymerase beta II subunit [Citharexylum ligustrinum]
Length = 703
Score = 159 bits (401), Expect(2) = 6e-71
Identities = 77/87 (88%), Positives = 81/87 (93%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSSQEARASFVEIRANGLI+HFLRI+L+KSTISY GKRN
Sbjct: 194 DTNIQLVRTCLVLNWDQDKNSSSSQEARASFVEIRANGLIQHFLRINLVKSTISYIGKRN 253
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG DNGSDCTNINPFSSIYSK
Sbjct: 254 DPSGSGLFSDNGSDCTNINPFSSIYSK 280
Score = 134 bits (338), Expect(2) = 6e-71
Identities = 70/86 (81%), Positives = 76/86 (88%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQPLNQN+RTIHTLLNRN FQSLI+LSSSNCFRMGPFK D KY HN +KESIQI+
Sbjct: 282 KIQQPLNQNQRTIHTLLNRNMGFQSLILLSSSNCFRMGPFK--DGKY--HNVLKESIQIS 337
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKNL PLGTAFLIANVYSF
Sbjct: 338 KDPLIPIKNLLGPLGTAFLIANVYSF 363
>gb|ADX99125.1| RNA polymerase beta II subunit [Stachytarpheta cayennensis]
Length = 683
Score = 161 bits (408), Expect(2) = 2e-70
Identities = 79/87 (90%), Positives = 81/87 (93%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSSQEARASFVEIRAN LIRHFLRIDL+KSTISY GKRN
Sbjct: 179 DTNIQLVRTCLVLNWDQDKNSSSSQEARASFVEIRANSLIRHFLRIDLVKSTISYIGKRN 238
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFSSIYSK
Sbjct: 239 DPSGSGLLSDNGSDCTNINPFSSIYSK 265
Score = 130 bits (327), Expect(2) = 2e-70
Identities = 68/86 (79%), Positives = 73/86 (84%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQP NQN+RTIHTLLNRN FQSLIILSS+NCFRM P FNDVKY HN IKE IQI+
Sbjct: 267 KIQQPFNQNQRTIHTLLNRNTGFQSLIILSSANCFRMAP--FNDVKY--HNVIKEKIQIS 322
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKN PLGTAFLIANVYSF
Sbjct: 323 KDPLIPIKNSLGPLGTAFLIANVYSF 348
>ref|YP_004935656.2| rpoC2 gene product (chloroplast) [Sesamum indicum]
gi|378747302|gb|AEO92696.2| RNA polymerase beta'' subunit
(chloroplast) [Sesamum indicum]
gi|496538591|gb|AGL45326.1| RpoC2 (chloroplast) [Sesamum
indicum]
Length = 1390
Score = 155 bits (393), Expect(2) = 7e-70
Identities = 76/87 (87%), Positives = 78/87 (89%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWD DKKSSSSQEARASFVEIRANGLIRHFLRIDL+KSTISY GKRN
Sbjct: 829 DTNIQLVRTCLVLNWDPDKKSSSSQEARASFVEIRANGLIRHFLRIDLVKSTISYIGKRN 888
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG DNGSDCTN NPFSS Y K
Sbjct: 889 DPSGSGLFSDNGSDCTNTNPFSSSYCK 915
Score = 134 bits (337), Expect(2) = 7e-70
Identities = 71/86 (82%), Positives = 75/86 (87%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQPLNQN+RTIHTLLNRN FQSLIILSSSNCFRMGP FN VKY HN IKESI+IT
Sbjct: 917 RIQQPLNQNQRTIHTLLNRNTGFQSLIILSSSNCFRMGP--FNGVKY--HNVIKESIKIT 972
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKN PLGTAFLIANVYSF
Sbjct: 973 KDPLIPIKNSLGPLGTAFLIANVYSF 998
>gb|ADX99113.1| RNA polymerase beta II subunit [Neosparton ephedroides]
Length = 667
Score = 157 bits (398), Expect(2) = 1e-69
Identities = 77/87 (88%), Positives = 80/87 (91%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSQEARASFVEIRAN LIRHFLRIDL+KSTISY GKRN
Sbjct: 192 DTNIQLVRTCLVLNWDQDKNGSSSQEARASFVEIRANDLIRHFLRIDLVKSTISYIGKRN 251
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
+P GSG L DNGSDCTNINPFSSIYSK
Sbjct: 252 NPSGSGLLSDNGSDCTNINPFSSIYSK 278
Score = 131 bits (329), Expect(2) = 1e-69
Identities = 69/86 (80%), Positives = 74/86 (86%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQP NQN+RT+HTLLNRN FQSLIILSSSNCFRMGP FNDVKY HN +KESIQI+
Sbjct: 280 KIQQPPNQNQRTLHTLLNRNTGFQSLIILSSSNCFRMGP--FNDVKY--HNVLKESIQIS 335
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP IPIKN PLGTAFLIANVYSF
Sbjct: 336 KDPRIPIKNSLGPLGTAFLIANVYSF 361
>ref|YP_008964024.1| RNA polymerase beta'' subunit [Ajuga reptans]
gi|558697185|gb|AHA84940.1| RNA polymerase beta'' subunit
[Ajuga reptans]
Length = 1377
Score = 155 bits (393), Expect(2) = 2e-69
Identities = 80/91 (87%), Positives = 82/91 (90%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDKKSSSSQEARASFVEIRANGLI+HFLRIDLLKSTISY GKRN
Sbjct: 828 DTNIQLVRTCLVLNWDQDKKSSSSQEARASFVEIRANGLIQHFLRIDLLKSTISYIGKRN 887
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSKFNNP 277
DP GSG L DNGSD NINPFSSIYSK P
Sbjct: 888 DPSGSGLLSDNGSD--NINPFSSIYSKARIP 916
Score = 132 bits (332), Expect(2) = 2e-69
Identities = 70/86 (81%), Positives = 73/86 (84%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+I Q LNQN+RTIHTLLNRN FQSLIILSSSNCFRMGP FND+KY HN IKESIQIT
Sbjct: 914 RIPQSLNQNQRTIHTLLNRNTGFQSLIILSSSNCFRMGP--FNDIKY--HNVIKESIQIT 969
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDPVIPIKN PLGTAFLI NVYSF
Sbjct: 970 KDPVIPIKNSLGPLGTAFLITNVYSF 995
>gb|ADX99102.1| RNA polymerase beta II subunit [Lippia salviifolia]
Length = 699
Score = 158 bits (400), Expect(2) = 4e-69
Identities = 78/87 (89%), Positives = 80/87 (91%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSSQEARASFVEIRANGLIRHFLRIDL+KST SY KRN
Sbjct: 192 DTNIQLVRTCLVLNWDQDKNSSSSQEARASFVEIRANGLIRHFLRIDLVKSTSSYIRKRN 251
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFSSIYSK
Sbjct: 252 DPSGSGLLSDNGSDCTNINPFSSIYSK 278
Score = 129 bits (323), Expect(2) = 4e-69
Identities = 67/85 (78%), Positives = 73/85 (85%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQPLNQN+RT+HTLLNRN FQSLIILSSSNCFRMGP FNDVKY HN +KESI I+
Sbjct: 280 KIQQPLNQNQRTLHTLLNRNTGFQSLIILSSSNCFRMGP--FNDVKY--HNVLKESISIS 335
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYS 516
KDP+IPIKN PLGTAF IANVYS
Sbjct: 336 KDPLIPIKNSLGPLGTAFRIANVYS 360
>gb|ADX99114.1| RNA polymerase beta II subunit [Lampayo castellani]
Length = 701
Score = 157 bits (397), Expect(2) = 6e-69
Identities = 76/87 (87%), Positives = 81/87 (93%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQ+K SSSQEARASFVEIRANGLIRHFLRIDL++STISY GKRN
Sbjct: 192 DTNIQLVRTCLVLNWDQEKNGSSSQEARASFVEIRANGLIRHFLRIDLVQSTISYIGKRN 251
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
+P GSG L DNGSDCTNINPFSSIYSK
Sbjct: 252 NPSGSGLLSDNGSDCTNINPFSSIYSK 278
Score = 129 bits (325), Expect(2) = 6e-69
Identities = 69/86 (80%), Positives = 73/86 (84%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQP NQN+RT+HTLLNRN FQS IILSSSNCFRMGP FNDVKY HN IKESIQI+
Sbjct: 280 KIQQPPNQNQRTLHTLLNRNTGFQSSIILSSSNCFRMGP--FNDVKY--HNVIKESIQIS 335
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP IPIKN PLGTAFLIANVYSF
Sbjct: 336 KDPRIPIKNSLGPLGTAFLIANVYSF 361
>gb|ADX99106.1| RNA polymerase beta II subunit [Xeroaloysia ovatifolia]
Length = 680
Score = 155 bits (391), Expect(2) = 1e-68
Identities = 76/87 (87%), Positives = 79/87 (90%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSSQEARASFVEI+ANGLIRHFLRIDL+KST SY KRN
Sbjct: 171 DTNIQLVRTCLVLNWDQDKNSSSSQEARASFVEIKANGLIRHFLRIDLVKSTSSYIRKRN 230
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFS IYSK
Sbjct: 231 DPSGSGLLSDNGSDCTNINPFSFIYSK 257
Score = 130 bits (328), Expect(2) = 1e-68
Identities = 68/86 (79%), Positives = 74/86 (86%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQPLNQN+RT+HTLLNRN FQSLIILSSSNCFRMGP FNDVKY HN +KESI I+
Sbjct: 259 KIQQPLNQNQRTLHTLLNRNTGFQSLIILSSSNCFRMGP--FNDVKY--HNVLKESIPIS 314
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKN PLGTAF IANVYSF
Sbjct: 315 KDPLIPIKNSLGPLGTAFRIANVYSF 340
>ref|YP_008815927.1| RNA polymerase beta'' subunit (chloroplast) [Lindenbergia
philippensis] gi|557136853|emb|CDI43908.1| RNA polymerase
beta'' subunit (chloroplast) [Lindenbergia philippensis]
Length = 1368
Score = 154 bits (390), Expect(2) = 2e-68
Identities = 76/87 (87%), Positives = 79/87 (90%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
D NIQLVRTCL+LNW Q KKSSSSQEARASFVEIR+NGLIRHFLRIDL+KS ISY GKRN
Sbjct: 827 DKNIQLVRTCLVLNWHQGKKSSSSQEARASFVEIRSNGLIRHFLRIDLVKSIISYIGKRN 886
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFSSIYSK
Sbjct: 887 DPSGSGLLSDNGSDCTNINPFSSIYSK 913
Score = 130 bits (327), Expect(2) = 2e-68
Identities = 70/86 (81%), Positives = 74/86 (86%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQPLNQN+RTIHTLLNRN FQSLIILSSSNCFRMGP FND KY HN IKESI+IT
Sbjct: 915 RIQQPLNQNQRTIHTLLNRNTGFQSLIILSSSNCFRMGP--FNDGKY--HNVIKESIKIT 970
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKN LGTAFLIANVYSF
Sbjct: 971 KDPLIPIKNSLGLLGTAFLIANVYSF 996
>gb|ADX99103.1| RNA polymerase beta II subunit [Lantana camara]
Length = 701
Score = 156 bits (394), Expect(2) = 2e-68
Identities = 77/87 (88%), Positives = 79/87 (90%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSSQEARASFVEIRANG IRHFLRIDL+KST SY KRN
Sbjct: 192 DTNIQLVRTCLVLNWDQDKNSSSSQEARASFVEIRANGWIRHFLRIDLVKSTSSYIRKRN 251
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFSSIYSK
Sbjct: 252 DPSGSGLLSDNGSDCTNINPFSSIYSK 278
Score = 129 bits (323), Expect(2) = 2e-68
Identities = 67/86 (77%), Positives = 73/86 (84%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQPLNQN+RT+HTLLNRN FQSLIILSSSNCFRMGP NDVKY HN +KESI I+
Sbjct: 280 KIQQPLNQNQRTLHTLLNRNTGFQSLIILSSSNCFRMGP--LNDVKY--HNVLKESISIS 335
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKN PLGTAF IANVYSF
Sbjct: 336 KDPLIPIKNSLGPLGTAFRIANVYSF 361
>gb|ADX99105.1| RNA polymerase beta II subunit [Phyla lanceolata]
Length = 698
Score = 158 bits (400), Expect(2) = 3e-68
Identities = 78/87 (89%), Positives = 80/87 (91%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWDQDK SSSSQEARASFVEIRANGLIRHFLRIDL+KST SY KRN
Sbjct: 192 DTNIQLVRTCLVLNWDQDKNSSSSQEARASFVEIRANGLIRHFLRIDLVKSTSSYIRKRN 251
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSG L DNGSDCTNINPFSSIYSK
Sbjct: 252 DPSGSGLLSDNGSDCTNINPFSSIYSK 278
Score = 126 bits (316), Expect(2) = 3e-68
Identities = 66/86 (76%), Positives = 73/86 (84%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQPLNQN+RT+HTLLNRN FQSLIILSSSNCFR+GP FNDVKY HN +KESI I+
Sbjct: 280 KIQQPLNQNQRTLHTLLNRNTGFQSLIILSSSNCFRIGP--FNDVKY--HNVLKESIPIS 335
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKN PLGTA IANVYSF
Sbjct: 336 KDPLIPIKNSLGPLGTACRIANVYSF 361
>gb|ADX99128.1| RNA polymerase beta II subunit [Petrea volubilis]
Length = 682
Score = 166 bits (419), Expect(2) = 6e-68
Identities = 80/87 (91%), Positives = 84/87 (96%)
Frame = +2
Query: 5 DTNIQLVRTCLLLNWDQDKKSSSSQEARASFVEIRANGLIRHFLRIDLLKSTISYSGKRN 184
DTNIQLVRTCL+LNWD+DKK+SSSQEARASFVEIRANGLIRHFLRIDL+KSTISY GKRN
Sbjct: 176 DTNIQLVRTCLVLNWDEDKKNSSSQEARASFVEIRANGLIRHFLRIDLVKSTISYIGKRN 235
Query: 185 DPPGSGFLPDNGSDCTNINPFSSIYSK 265
DP GSGFL DNGSDCTNINPFSSIYSK
Sbjct: 236 DPSGSGFLSDNGSDCTNINPFSSIYSK 262
Score = 117 bits (294), Expect(2) = 6e-68
Identities = 66/86 (76%), Positives = 69/86 (80%)
Frame = +1
Query: 262 QIQQPLNQNKRTIHTLLNRNKEFQSLIILSSSNCFRMGPFKFNDVKYHNHNAIKESIQIT 441
+IQQ QN+RTIH LLNRN FQSLIILSSSNCFRMGP FNDVKY HN IKESI I
Sbjct: 264 KIQQ---QNQRTIHALLNRNTGFQSLIILSSSNCFRMGP--FNDVKY--HNVIKESIPIL 316
Query: 442 KDPVIPIKNLSRPLGTAFLIANVYSF 519
KDP+IPIKN PLGTAF IANVYSF
Sbjct: 317 KDPLIPIKNSLGPLGTAFRIANVYSF 342