BLASTX nr result

ID: Mentha25_contig00044911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00044911
         (614 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361256.1| PREDICTED: putative F-box protein At1g49610-...    56   7e-06

>ref|XP_006361256.1| PREDICTED: putative F-box protein At1g49610-like isoform X1
           [Solanum tuberosum]
          Length = 484

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 13/214 (6%)
 Frame = -1

Query: 605 LKKLVIGRRNSHYFWPAVEAELRIWGPNLLNLEISAFVYATCLLQVPSLIEVILCFKESF 426
           LKKL I    + Y     +  L I  P++ NLE+  +     L  V +L+         F
Sbjct: 218 LKKLTI----NSYETSECDVWLEILAPHIQNLELLGYSSGIRLKNVAALVTAFFRIDFQF 273

Query: 425 GIAGEVIDEDLPPLGMFYQVFRSIRHVEEVTLSDLCIKLLHNMNANGMAVQFSNTKFLKL 246
              GE    +   +    ++  S+ HV+ + LS  CIK +  +   G   Q S++KFLKL
Sbjct: 274 DF-GEADRSEKNEISCLKELLHSVAHVKNLELSHWCIKCMSTLALEGFQYQPSSSKFLKL 332

Query: 245 YAGEPD----QVLCVLEMFPKLETLAIELHKD-----LWHDLEDDEYVLRSFASEAIYPS 93
           +    +     +   ++    +ETL I+ H         +  +D E  +R+F +     +
Sbjct: 333 HTNYEELDLPGICSFIQNSSNIETLIIDWHHQDRGYLYAYSFKDKERQIRTFETHKF--N 390

Query: 92  PSLLQLKRVEII----WSQHNTSIFPAIEILLQN 3
             LL LK ++ I        N  + P ++ LL+N
Sbjct: 391 CPLLHLKTIKFINLVGPLSVNKFVLPLVKYLLEN 424


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