BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00044508
         (1030 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus...   650   0.0  
gb|EMS50869.1| DNA-directed RNA polymerase II subunit RPB1 [Trit...   645   0.0  
gb|AFW57310.1| RNA polymerase II large subunit family protein [Z...   645   0.0  
gb|AAQ08515.1| RNA polymerase II largest subunit [Zea mays]           645   0.0  
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su...   645   0.0  
ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [S...   645   0.0  
gb|EMT20712.1| DNA-directed RNA polymerase II subunit RPB1 [Aegi...   644   0.0  
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su...   644   0.0  
ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II su...   644   0.0  
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su...   644   0.0  
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su...   643   0.0  
dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]    643   0.0  
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo...   643   0.0  
gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indi...   643   0.0  
gb|ACD63087.1| RNA polymerase II largest subunit [Nicotiana taba...   642   0.0  
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su...   642   0.0  
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su...   642   0.0  
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su...   642   0.0  
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su...   642   0.0  
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr...   642   0.0  

>gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus]
          Length = 1842

 Score =  650 bits (1677), Expect = 0.0
 Identities = 324/342 (94%), Positives = 329/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAEY+  KKKSDDQDQMPEPVERKQ LSAEKVLSILKRITDEDC+ LGLNPKFARPDWM
Sbjct: 185  MVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFHVATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQ
Sbjct: 365  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>gb|EMS50869.1| DNA-directed RNA polymerase II subunit RPB1 [Triticum urartu]
          Length = 2040

 Score =  645 bits (1665), Expect = 0.0
 Identities = 317/342 (92%), Positives = 330/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++A KKKSDDQDQ+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPKFARPDWM
Sbjct: 185  MVAEFKATKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 365  PDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>gb|AFW57310.1| RNA polymerase II large subunit family protein [Zea mays]
          Length = 1850

 Score =  645 bits (1664), Expect = 0.0
 Identities = 315/342 (92%), Positives = 331/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++APKKK+DDQDQ+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPK+ARPDWM
Sbjct: 184  MVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWM 243

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 244  ILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 303

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 304  LLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 363

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 364  PDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 423

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 424  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 483

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 484  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 525


>gb|AAQ08515.1| RNA polymerase II largest subunit [Zea mays]
          Length = 1009

 Score =  645 bits (1664), Expect = 0.0
 Identities = 315/342 (92%), Positives = 331/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++APKKK+DDQDQ+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPK+ARPDWM
Sbjct: 103  MVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWM 162

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 163  ILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 222

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 223  LLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 282

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 283  PDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 342

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 343  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 402

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 403  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 444


>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
            X1 [Setaria italica]
          Length = 1852

 Score =  645 bits (1663), Expect = 0.0
 Identities = 315/342 (92%), Positives = 331/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++APKKK+DDQDQ+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPKFARPDWM
Sbjct: 185  MVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 365  PDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>ref|XP_002443877.1| hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
            gi|241940227|gb|EES13372.1| hypothetical protein
            SORBIDRAFT_07g003680 [Sorghum bicolor]
          Length = 1857

 Score =  645 bits (1663), Expect = 0.0
 Identities = 315/342 (92%), Positives = 331/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++APKKKSDDQDQ+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPK+ARPDWM
Sbjct: 184  MVAEFKAPKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWM 243

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 244  ILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 303

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 304  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 363

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 364  PDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 423

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 424  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 483

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 484  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 525


>gb|EMT20712.1| DNA-directed RNA polymerase II subunit RPB1 [Aegilops tauschii]
          Length = 1861

 Score =  644 bits (1662), Expect = 0.0
 Identities = 316/342 (92%), Positives = 330/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++A KKKSDDQDQ+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPK+ARPDWM
Sbjct: 185  MVAEFKATKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 365  PDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
            tuberosum]
          Length = 1839

 Score =  644 bits (1660), Expect = 0.0
 Identities = 318/342 (92%), Positives = 327/342 (95%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAEY+  KKKSDD +QMPEPVERKQ LSAE+VLSILKR++DEDC  LGLNP+FARPDWM
Sbjct: 185  MVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQ L        PSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ
Sbjct: 245  ILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ
Sbjct: 365  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>ref|XP_004972810.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
            X2 [Setaria italica]
          Length = 1852

 Score =  644 bits (1660), Expect = 0.0
 Identities = 314/342 (91%), Positives = 331/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++APKKK+DDQDQ+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPKFARPDWM
Sbjct: 185  MVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 365  PDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHL+LGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYVKKSSDQHLDLGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
            lycopersicum]
          Length = 1846

 Score =  644 bits (1660), Expect = 0.0
 Identities = 318/342 (92%), Positives = 327/342 (95%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAEY+  KKKSDD +QMPEPVERKQ LSAE+VLSILKR++DEDC  LGLNP+FARPDWM
Sbjct: 185  MVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQ L        PSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ
Sbjct: 245  ILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ
Sbjct: 365  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
            brachyantha]
          Length = 1855

 Score =  643 bits (1659), Expect = 0.0
 Identities = 314/342 (91%), Positives = 331/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++APKKK+DDQ+Q+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPKFARPDWM
Sbjct: 185  MVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 365  PDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>dbj|BAK02300.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1859

 Score =  643 bits (1659), Expect = 0.0
 Identities = 315/342 (92%), Positives = 330/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++A KKKSDDQDQ+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPK+ARPDWM
Sbjct: 185  MVAEFKATKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL++QERNGAPAHII+EFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGAPAHIITEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 365  PDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
          Length = 804

 Score =  643 bits (1659), Expect = 0.0
 Identities = 314/342 (91%), Positives = 331/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++APKKK+DDQ+Q+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPKFARPDWM
Sbjct: 116  MVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWM 175

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 176  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 235

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 236  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 295

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 296  PDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 355

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 356  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 415

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 416  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 457


>gb|EEC82922.1| hypothetical protein OsI_27866 [Oryza sativa Indica Group]
          Length = 1449

 Score =  643 bits (1659), Expect = 0.0
 Identities = 314/342 (91%), Positives = 331/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAE++APKKK+DDQ+Q+PEPVERKQILSAE+VL++LKRI+DEDC  LGLNPKFARPDWM
Sbjct: 155  MVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFARPDWM 214

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHII+EFAQ
Sbjct: 215  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIITEFAQ 274

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 275  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 334

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR+DGQ
Sbjct: 335  PDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIREDGQ 394

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRY+KKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 395  RLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 454

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 455  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 496


>gb|ACD63087.1| RNA polymerase II largest subunit [Nicotiana tabacum]
          Length = 1010

 Score =  642 bits (1657), Expect = 0.0
 Identities = 317/342 (92%), Positives = 327/342 (95%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            +VAEY+  KKKSDD +QMPEPVERKQ LSAE+VLSILKR++DEDC  LGLNP++ARPDWM
Sbjct: 104  MVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYARPDWM 163

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQ L        PSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ
Sbjct: 164  ILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 223

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDNDLPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSARTVIT
Sbjct: 224  LLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSARTVIT 283

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ
Sbjct: 284  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 343

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 344  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 403

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 404  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 445


>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
            [Citrus sinensis]
          Length = 1963

 Score =  642 bits (1655), Expect = 0.0
 Identities = 313/342 (91%), Positives = 329/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            ++AEY+A +KK+DDQ+Q+PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+ARPDWM
Sbjct: 185  MIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ
Sbjct: 365  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
            [Citrus sinensis]
          Length = 1853

 Score =  642 bits (1655), Expect = 0.0
 Identities = 313/342 (91%), Positives = 329/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            ++AEY+A +KK+DDQ+Q+PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+ARPDWM
Sbjct: 185  MIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ
Sbjct: 365  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
            [Citrus sinensis]
          Length = 1790

 Score =  642 bits (1655), Expect = 0.0
 Identities = 313/342 (91%), Positives = 329/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            ++AEY+A +KK+DDQ+Q+PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+ARPDWM
Sbjct: 185  MIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ
Sbjct: 365  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
            [Citrus sinensis] gi|568825318|ref|XP_006467028.1|
            PREDICTED: DNA-directed RNA polymerase II subunit 1-like
            isoform X2 [Citrus sinensis]
          Length = 1860

 Score =  642 bits (1655), Expect = 0.0
 Identities = 313/342 (91%), Positives = 329/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            ++AEY+A +KK+DDQ+Q+PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+ARPDWM
Sbjct: 185  MIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ
Sbjct: 365  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526


>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
            gi|557527347|gb|ESR38597.1| hypothetical protein
            CICLE_v10024686mg [Citrus clementina]
          Length = 1860

 Score =  642 bits (1655), Expect = 0.0
 Identities = 313/342 (91%), Positives = 329/342 (96%)
 Frame = -3

Query: 1028 LVAEYRAPKKKSDDQDQMPEPVERKQILSAEKVLSILKRITDEDCKTLGLNPKFARPDWM 849
            ++AEY+A +KK+DDQ+Q+PEPVERKQ L+AE+VL +LKRI+DEDC+ LGLNPK+ARPDWM
Sbjct: 185  MIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYARPDWM 244

Query: 848  ILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQ 669
            ILQVL        PSVMMDTSSRSEDDLTHQLAMIIRHNENL+RQERNGAPAHIISEFAQ
Sbjct: 245  ILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIISEFAQ 304

Query: 668  LLQFHVATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 489
            LLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT
Sbjct: 305  LLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVIT 364

Query: 488  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 309
            PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ
Sbjct: 365  PDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQ 424

Query: 308  RLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 129
            RLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN
Sbjct: 425  RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLN 484

Query: 128  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 3
            LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS
Sbjct: 485  LSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVS 526