BLASTX nr result

ID: Mentha25_contig00043735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00043735
         (402 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]      57   3e-06
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]         57   3e-06
gb|ABA95319.1| retrotransposon protein, putative, unclassified [...    55   1e-05

>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/65 (38%), Positives = 36/65 (55%)
 Frame = -1

Query: 207  LQNLPNTDAEGEFIVESLSFVDHREICRHGLTVDQVLVIWNTAAPEIATWEDVKFIQKRF 28
            + NLP+   +G+   E L+ +  R + R G+ V Q L++W   +P  ATWED   IQ  F
Sbjct: 1411 MSNLPSVGPDGQIKTEPLAVLQRRMVPRKGVAVTQWLILWQNLSPAEATWEDASVIQAMF 1470

Query: 27   PSLYP 13
            PS  P
Sbjct: 1471 PSFNP 1475


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/65 (40%), Positives = 37/65 (56%)
 Frame = -1

Query: 207  LQNLPNTDAEGEFIVESLSFVDHREICRHGLTVDQVLVIWNTAAPEIATWEDVKFIQKRF 28
            + NLP+   +G+   E ++ +  R I R G+ V Q LV+W+  +P  ATWED   IQ  F
Sbjct: 1522 MANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMF 1581

Query: 27   PSLYP 13
            PS  P
Sbjct: 1582 PSFNP 1586


>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 955

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/65 (36%), Positives = 37/65 (56%)
 Frame = -1

Query: 207  LQNLPNTDAEGEFIVESLSFVDHREICRHGLTVDQVLVIWNTAAPEIATWEDVKFIQKRF 28
            + NLP    +G+   E ++ +  R I R+ + V Q L++W+   P  ATWED  +IQK F
Sbjct: 891  MPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEATWEDASYIQKVF 950

Query: 27   PSLYP 13
            P+  P
Sbjct: 951  PNFQP 955


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