BLASTX nr result

ID: Mentha25_contig00043208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00043208
         (473 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007296489.1| hmg-i/hmg-y, DNA-binding protein [Marssonina...    85   1e-14
gb|EPE26877.1| hypothetical protein GLAREA_02791 [Glarea lozoyen...    61   2e-07
ref|XP_001592609.1| hypothetical protein SS1G_06850 [Sclerotinia...    56   4e-06

>ref|XP_007296489.1| hmg-i/hmg-y, DNA-binding protein [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1] gi|406860097|gb|EKD13157.1|
            hmg-i/hmg-y, DNA-binding protein [Marssonina brunnea f.
            sp. 'multigermtubi' MB_m1]
          Length = 1073

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 16/171 (9%)
 Frame = -3

Query: 471  TYQNSSYFTQPKLQLS---SESNIGTLSPYNVSQSSPSHFHNEDNYRTTISQKMKNSKS- 304
            +Y+ SS  T  ++      +E+   T SP+ + Q SPS      +YR+  +  +    + 
Sbjct: 807  SYRTSSTHTLAQISPQFPQTENAYRTSSPHTLGQPSPSFSQTSSSYRSNSTHNLAQQHTP 866

Query: 303  --FSNTENDHRNSNTHSIAQQIQSFPNSRTKNIIQ-STQNAYGQLNEASLIDLPTLDSLV 133
                 TEN +R  +THS+ Q   ++  +R+ +  Q S Q+ Y Q ++ S +DLPTLDSL 
Sbjct: 867  TVTQPTENSYRTPSTHSMVQPSPAYTTARSHSQSQPSHQSQYPQYSDPSFLDLPTLDSLG 926

Query: 132  HANKSNNSNL---ITSN-----CGYGQNLGVNIGTSR-AMMGSNHLYGGVN 7
            HA  + N+N    I+SN      G+GQ +GV +G SR +   SN LYG  +
Sbjct: 927  HAGSTGNTNTSLGISSNNYGTASGFGQGIGVGVGNSRSSQASSNSLYGSTS 977


>gb|EPE26877.1| hypothetical protein GLAREA_02791 [Glarea lozoyensis ATCC 20868]
          Length = 1069

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 28/161 (17%)
 Frame = -3

Query: 405  TLSPYNVSQSSPSHFHNEDNYRTTISQKMKNSKSFSNTENDHRNSNTHSIAQQIQSFPN- 229
            T+S  +++  +   F   + YRT      + S SF+ TE+++R +N H++AQ   +F   
Sbjct: 853  TMSQNSMAAQASPQFSAAETYRTASPHIAQPSPSFAQTESNYRTTNAHNLAQPSPAFTQA 912

Query: 228  -------------------SRTKNIIQSTQNAYGQLNEASLIDLPTLDSLVHANKSNNSN 106
                               S  ++  Q+    Y Q +++S +DLPTL+SL H+     ++
Sbjct: 913  ENPYRTPATHSMAQGTSSYSTARSHAQAPSTHYNQFSDSSYMDLPTLESLGHSGSGTTAS 972

Query: 105  LITSNCGYGQNLGVNIG--------TSRAMMGSNHLYGGVN 7
            L     GYGQ + V +G         SR+   ++ LY   N
Sbjct: 973  L----GGYGQGMSVGMGGGNNTTNNQSRSTGSTSGLYSTAN 1009


>ref|XP_001592609.1| hypothetical protein SS1G_06850 [Sclerotinia sclerotiorum 1980]
            gi|154704628|gb|EDO04367.1| hypothetical protein
            SS1G_06850 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 951

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
 Frame = -3

Query: 423  SESNIGTLSPYNVSQSSPSHFHNEDNYRTTISQKMKNSKSFSNTENDHRNSNTHSIAQQI 244
            +E+   T SP+N++Q SPS    + +YRT+ S     S ++S  E  + N  T SI+   
Sbjct: 757  AENAYRTASPHNIAQPSPSFSQADTSYRTS-SSLANPSPTYSQPEASY-NPRTPSISTTT 814

Query: 243  QSFPN--------SRTKNIIQST-----QNAYGQLNEASLIDLPTLD--SLVHANKSNNS 109
             S+          ++T +  +ST     Q +Y Q  +AS IDLPTLD  +L H       
Sbjct: 815  PSYSQPDYKSSALNQTSSYARSTPTTHQQQSYNQFADASYIDLPTLDLPTLGH------- 867

Query: 108  NLITSNCGYGQ----NLGVNIGTSRAMMGSNHLYG 16
               TS   YGQ    NLG   G+SR+   +N +YG
Sbjct: 868  ---TSASPYGQTNMNNLG---GSSRSNANTNSIYG 896


Top