BLASTX nr result

ID: Mentha25_contig00043088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00043088
         (340 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44365.1| hypothetical protein MIMGU_mgv1a025674mg [Mimulus...    60   2e-07
ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu...    56   5e-06

>gb|EYU44365.1| hypothetical protein MIMGU_mgv1a025674mg [Mimulus guttatus]
          Length = 305

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/65 (52%), Positives = 37/65 (56%)
 Frame = +2

Query: 5   MISDSELIERLRGVXXXXXXXXXXXXXXXXXXXXXXGIDLSERKAFIREQVDAYMQSQFE 184
           M+SDSELIERLR                         IDLS+RKAFIREQVD YMQSQFE
Sbjct: 1   MVSDSELIERLREFLSTSDLNTTTTAIVRRRLEQEFDIDLSDRKAFIREQVDVYMQSQFE 60

Query: 185 NAAEN 199
           + A N
Sbjct: 61  SVANN 65


>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
           communis] gi|223538407|gb|EEF40013.1| Upstream
           activation factor subunit UAF30, putative [Ricinus
           communis]
          Length = 322

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/65 (47%), Positives = 37/65 (56%)
 Frame = +2

Query: 5   MISDSELIERLRGVXXXXXXXXXXXXXXXXXXXXXXGIDLSERKAFIREQVDAYMQSQFE 184
           M+SDSELIERLR                        GIDLS++KAFIREQVD ++QSQFE
Sbjct: 1   MVSDSELIERLREFLKNSDLNTTTTGIVRRQLEEDFGIDLSDKKAFIREQVDLFLQSQFE 60

Query: 185 NAAEN 199
              +N
Sbjct: 61  ENDQN 65


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