BLASTX nr result
ID: Mentha25_contig00042790
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00042790
(602 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 87 5e-15
gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc... 83 7e-14
gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group] 83 7e-14
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 82 9e-14
gb|AAP21398.1| putative gag-pol polyprotein [Oryza sativa Japoni... 75 1e-13
emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group] 82 1e-13
ref|XP_003627545.1| hypothetical protein MTR_8g027350 [Medicago ... 82 2e-13
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 81 3e-13
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 81 3e-13
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo... 80 3e-13
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 80 3e-13
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G... 80 3e-13
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 80 3e-13
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera] 79 1e-12
ref|XP_002449872.1| hypothetical protein SORBIDRAFT_05g024695 [S... 79 1e-12
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera] 79 1e-12
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera] 79 1e-12
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 79 1e-12
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 78 2e-12
emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera] 77 3e-12
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 86.7 bits (213), Expect = 5e-15
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Frame = -2
Query: 601 GGVRGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQ 422
GG RG N+ CQLCGK+GH KC++RFD FTG + + + ++ VD
Sbjct: 177 GGGRGDDGSFNNNNRPTCQLCGKIGHTVHKCWKRFDASFTGEDKSANVAASSYEVD---- 232
Query: 421 ESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDLTK--GTAEG 263
WY+DSGAT+HIT++L+ L++ +Y G++ V +G + + G+A G
Sbjct: 233 ------TNWYIDSGATDHITSELDKLTVKDKYAGNDQVHTASGSGVAQIGGSATG 281
>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 358
Score = 82.8 bits (203), Expect = 7e-14
Identities = 36/100 (36%), Positives = 56/100 (56%)
Frame = -2
Query: 592 RGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQESG 413
RGG R +CQLCGK+GH +KC++RFD ++G + +A ++ VD
Sbjct: 209 RGGGGRGDGKLKPICQLCGKIGHTVVKCWKRFDTSYSGEEKSVAAATNSYGVD------- 261
Query: 412 GDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNG 293
WY+D+GAT+HIT +L L++ +Y G + V +G
Sbjct: 262 ---TNWYIDTGATDHITGELEKLTVRDKYTGGDQVHTASG 298
>gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 760
Score = 82.8 bits (203), Expect = 7e-14
Identities = 37/100 (37%), Positives = 57/100 (57%)
Frame = -2
Query: 592 RGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQESG 413
+GG + N + CQLCGK+GH +KC++RFD FTG + ++ +D
Sbjct: 187 QGGRGGANNQEWPKCQLCGKLGHTVIKCYKRFDTSFTGEEKAANTATTSYGID------- 239
Query: 412 GDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNG 293
WY+D+GAT+HIT +L+ L++ +Y G+E V NG
Sbjct: 240 ---TNWYVDTGATDHITGELDKLTVRDKYTGNEQVHAANG 276
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 82.4 bits (202), Expect = 9e-14
Identities = 41/97 (42%), Positives = 60/97 (61%)
Frame = -2
Query: 583 SARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQESGGDA 404
SA + + VCQ+CG++GH A+KC+ RFD +N P QAF+ VS E+G +
Sbjct: 270 SASPSSGQRPVCQICGRIGHTAIKCYNRFD-----NNYQSEVPTQAFSALRVSDETGKE- 323
Query: 403 AMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNG 293
WY DS AT HIT + L +T Y+G+++V+VG+G
Sbjct: 324 --WYPDSAATAHITASTSGLQNATTYEGNDAVLVGDG 358
>gb|AAP21398.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 461
Score = 74.7 bits (182), Expect(2) = 1e-13
Identities = 38/103 (36%), Positives = 55/103 (53%)
Frame = -2
Query: 601 GGVRGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQ 422
G GG AR N CQLCGK+GHV C+ R+D +F +++A ++ VD
Sbjct: 146 GRGNGGGARFSNKPRSTCQLCGKIGHVVADCWYRYDENFIPD--SKTAAAASYGVD---- 199
Query: 421 ESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNG 293
WYMD+GAT+HIT +L+ L+ +Y G E + +G
Sbjct: 200 ------TNWYMDTGATDHITGELDKLTTHEKYNGKEQIHTASG 236
Score = 27.7 bits (60), Expect(2) = 1e-13
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 294 DKTSQRVLLKGNLVNGLYQLDLSKLSFKAATLGS 193
D+ ++ +LL+G NGLY L S L+ LG+
Sbjct: 256 DQVTKNLLLRGPCRNGLYPLPTSSLATSKQVLGA 289
>emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]
Length = 261
Score = 82.0 bits (201), Expect = 1e-13
Identities = 38/101 (37%), Positives = 57/101 (56%)
Frame = -2
Query: 598 GVRGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQE 419
G RGG+ K CQLCGK+GH +KC++RFD FTG +A ++ +D
Sbjct: 174 GSRGGANNQERPK---CQLCGKLGHTVIKCYKRFDTSFTGEEKAANAATTSYGID----- 225
Query: 418 SGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGN 296
WY+D+GAT+H+T +L+ L++ +Y G+E V N
Sbjct: 226 -----TNWYVDTGATDHVTGELDKLTVRDKYTGNEQVHAAN 261
>ref|XP_003627545.1| hypothetical protein MTR_8g027350 [Medicago truncatula]
gi|355521567|gb|AET02021.1| hypothetical protein
MTR_8g027350 [Medicago truncatula]
Length = 220
Score = 81.6 bits (200), Expect = 2e-13
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Frame = -2
Query: 598 GVRGGSARS-VNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSN-TNESAPPQAFAVDCVS 425
G+RGG + VN+ VCQ+C + GH A+ CF RFD ++G+N +N Q V+
Sbjct: 99 GMRGGRGKGRVNNSKPVCQVCTRTGHTAISCFYRFDKSYSGTNYSNSENEKQGTHNAFVA 158
Query: 424 QESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDL 284
WY DSGA+NH+T+ + E+ G S+MVGNG+ L
Sbjct: 159 SPYSSQDYEWYFDSGASNHVTHQTDRFQDLVEHTGKNSLMVGNGEKL 205
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 80.9 bits (198), Expect = 3e-13
Identities = 41/97 (42%), Positives = 59/97 (60%)
Frame = -2
Query: 583 SARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQESGGDA 404
S+ V+ VCQ+CG+ GH ALKC+ RFD N A QAF+ VS ++G +
Sbjct: 270 SSPQVSGPRPVCQICGRTGHTALKCYNRFD-------NNYQAEIQAFSTLRVSDDTGKE- 321
Query: 403 AMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNG 293
W+ DS AT H+T+ N L +TEY+G ++V+VG+G
Sbjct: 322 --WHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDG 356
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 80.9 bits (198), Expect = 3e-13
Identities = 41/90 (45%), Positives = 50/90 (55%)
Frame = -2
Query: 553 VCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQESGGDAAMWYMDSGAT 374
VCQ+CGK GH A+ CF RFD + G PPQ A + D +WYMDSGA
Sbjct: 274 VCQICGKSGHTAIDCFHRFDYSYQGR-----FPPQDLAAMVAETNATFDHQVWYMDSGAN 328
Query: 373 NHITNDLNNLSISTEYQGSESVMVGNGQDL 284
HIT+D NL+ + SE+V VGNG L
Sbjct: 329 AHITSDATNLTHQQPFCESETVTVGNGSGL 358
>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 80.5 bits (197), Expect = 3e-13
Identities = 37/106 (34%), Positives = 57/106 (53%)
Frame = -2
Query: 601 GGVRGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQ 422
G RGG + CQLC K+GH +KC++RFD FTG + +A ++ V
Sbjct: 137 GRGRGGFTNNQGGDHPKCQLCDKLGHTVVKCYKRFDASFTGEEKSAAAATSSYGV----- 191
Query: 421 ESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDL 284
WY+D+GAT+HIT+DL+ L++ +Y G + V +G +
Sbjct: 192 -----GTNWYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGM 232
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 80.5 bits (197), Expect = 3e-13
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Frame = -2
Query: 592 RGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNT---------NESAPPQAFA 440
+GG S S+ CQLCGK GH A C+ RFD+ F G T N++ P A
Sbjct: 275 QGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGNQNNIPAMVA 334
Query: 439 VDCVSQESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDLT 281
S + WY+DSGA++H+T +L NL+ ++ Y G++ V +GNG+ L+
Sbjct: 335 ----SASNNPADESWYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLS 383
>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 572
Score = 80.5 bits (197), Expect = 3e-13
Identities = 37/106 (34%), Positives = 57/106 (53%)
Frame = -2
Query: 601 GGVRGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQ 422
G RGG + CQLC K+GH +KC++RFD FTG + +A ++ V
Sbjct: 210 GRGRGGFTNNQGGDHPKCQLCDKLGHTVVKCYKRFDASFTGEEKSAAAATSSYGV----- 264
Query: 421 ESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDL 284
WY+D+GAT+HIT+DL+ L++ +Y G + V +G +
Sbjct: 265 -----GTNWYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGM 305
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 80.5 bits (197), Expect = 3e-13
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Frame = -2
Query: 592 RGGSARSVNSKSI----VCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVS 425
RG S NS + VCQ+CG+ GH ALKC+ RFD ++ +T QAF+ VS
Sbjct: 264 RGFSQHQTNSNNTGERPVCQICGRTGHTALKCYNRFDHNYQSVDT-----AQAFSSLRVS 318
Query: 424 QESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNG 293
SG + W DS AT H+T+ NNL ++ Y GS++V+VG+G
Sbjct: 319 DSSGKE---WVPDSAATAHVTSSTNNLQAASPYNGSDTVLVGDG 359
>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
Length = 1319
Score = 79.0 bits (193), Expect = 1e-12
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Frame = -2
Query: 592 RGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAP-----PQAFAVDCV 428
+ G S +S+ CQLCGK GH C+ RFD+ + S ++ ++P P +
Sbjct: 253 QNGRHNSNSSEKPQCQLCGKFGHTVQICYHRFDISYQSSXSSNTSPSNAGNPNSIPAMVA 312
Query: 427 SQESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDLT 281
S + D WY+DSGA++H+T + NL+ S+ Y G++ V +GNG+ L+
Sbjct: 313 SSNNLADDT-WYLDSGASHHLTQSVXNLTSSSPYTGTDKVTIGNGKHLS 360
>ref|XP_002449872.1| hypothetical protein SORBIDRAFT_05g024695 [Sorghum bicolor]
gi|241935715|gb|EES08860.1| hypothetical protein
SORBIDRAFT_05g024695 [Sorghum bicolor]
Length = 438
Score = 78.6 bits (192), Expect = 1e-12
Identities = 41/107 (38%), Positives = 56/107 (52%)
Frame = -2
Query: 601 GGVRGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQ 422
GG GG R + CQ+C K GH A CF+R D +T PPQ A S
Sbjct: 271 GGRGGGGRRVPFQPGMFCQICTKEGHSAFDCFKRHDASYT--------PPQKSASAATSS 322
Query: 421 ESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDLT 281
G D+ WYMD+G T+HIT++L+ L++ +Y G + V NG +T
Sbjct: 323 HYGVDSN-WYMDTGVTDHITSELDKLTVRDKYHGGDQVHTANGSAVT 368
>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
Length = 1139
Score = 78.6 bits (192), Expect = 1e-12
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Frame = -2
Query: 592 RGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAP----PQAFAVDCVS 425
+GG S S+ CQLCGK GH A C+ RFD+ F G T S Q V+
Sbjct: 246 QGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTTSHSLNNGNQNNIPTMVA 305
Query: 424 QESGGDA-AMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDLT 281
S A WY+DSG ++H+T +L NL+ ++ Y G++ V +GNG+ L+
Sbjct: 306 SASNSPADESWYLDSGTSHHLTQNLGNLTSTSLYTGTDRVTIGNGKHLS 354
>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
Length = 2220
Score = 78.6 bits (192), Expect = 1e-12
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Frame = -2
Query: 592 RGGSARSVNSKSIVCQLCGKVGHVALKCFRRFDVHFTGSNTNESAP-----PQAFAVDCV 428
+ G S +S+ CQLCGK GH C+ RFD+ + S ++ ++P P +
Sbjct: 1120 QNGRHNSNSSEKPQCQLCGKFGHTVQICYHRFDISYQSSQSSNTSPSNAGNPNSIPAMVA 1179
Query: 427 SQESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDLT 281
S + D WY+DSGA++H+T + NL+ S+ Y G + V +GNG+ L+
Sbjct: 1180 SSNNLADDT-WYLDSGASHHLTQSVGNLTSSSPYTGIDKVTIGNGKHLS 1227
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 78.6 bits (192), Expect = 1e-12
Identities = 39/89 (43%), Positives = 55/89 (61%)
Frame = -2
Query: 550 CQLCGKVGHVALKCFRRFDVHFTGSNTNESAPPQAFAVDCVSQESGGDAAMWYMDSGATN 371
CQ+CGK GH+A+ C+ RFD + + N A A + + GD + WYMD+GAT+
Sbjct: 256 CQVCGKYGHIAINCYHRFDQTYQPTMNNHLAAMVA------TPSTVGDES-WYMDTGATH 308
Query: 370 HITNDLNNLSISTEYQGSESVMVGNGQDL 284
H+T +LN L+ T + GS+ VMVGNG L
Sbjct: 309 HLTPNLNKLNSHTPFAGSDKVMVGNGNRL 337
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 78.2 bits (191), Expect = 2e-12
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Frame = -2
Query: 598 GVRGGSARSVNS---KSIVCQLCGKVGHVALKCFRRFDVHFTGSNT------NESAPPQA 446
G R G R NS + CQLCGK GH A C+ RFD+ F G T N
Sbjct: 120 GGRNGQGRRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGXTTTSPSLNNGNQNNI 179
Query: 445 FAVDCVSQESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDLT 281
A+ S D + WY+DSGA++H+T +L NL+ ++ Y G++ V +GN + L+
Sbjct: 180 LAMVASFSNSSADES-WYLDSGASHHLTQNLGNLTSTSPYTGTDRVTIGNXKHLS 233
>emb|CAN69367.1| hypothetical protein VITISV_035520 [Vitis vinifera]
Length = 1083
Score = 77.4 bits (189), Expect = 3e-12
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Frame = -2
Query: 592 RGGSARSVNSKSIV---CQLCGKVGHVALKCFRRFDVHFTGSNTNESAP-----PQAFAV 437
R G R NS S CQLCGK GH+ C+ RFD+ + S + ++P P
Sbjct: 168 RYGQNRRHNSNSSEKPQCQLCGKFGHIVQICYXRFDISYQSSQXSNTSPSNAGNPNXIPA 227
Query: 436 DCVSQESGGDAAMWYMDSGATNHITNDLNNLSISTEYQGSESVMVGNGQDLT 281
S + D WY+DSGA +H+T + NL+ S+ Y G++ V +GNG+ L+
Sbjct: 228 MVASSNNLADDT-WYLDSGANHHLTQSVGNLTSSSPYTGTDKVTIGNGKHLS 278