BLASTX nr result

ID: Mentha25_contig00042602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00042602
         (326 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42657.1| hypothetical protein MIMGU_mgv1a0058602mg [Mimulu...    66   6e-09
gb|EYU42656.1| hypothetical protein MIMGU_mgv1a0058602mg, partia...    66   6e-09
ref|XP_006362619.1| PREDICTED: cleavage stimulation factor subun...    57   4e-06
ref|XP_006349660.1| PREDICTED: cleavage stimulation factor subun...    55   8e-06

>gb|EYU42657.1| hypothetical protein MIMGU_mgv1a0058602mg [Mimulus guttatus]
          Length = 467

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 51/134 (38%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
 Frame = -1

Query: 323 YNAVPRSQTVGINP---QFSAAGLQNASGMAES---------------------VPGMTN 216
           YN  P  Q    +P   QFSA   QN S    S                     V    +
Sbjct: 308 YNDQPMLQNAATHPMHSQFSAPSFQNISSSTSSAMPENMDLRVHSLSVPEKKRMVTDSVD 367

Query: 215 QIDRPSKIMKLNDGRASPS-HAVHVAPPMSVPIPSSGIQGRQPLRAE--ETPDAGKQVTQ 45
           QIDR SK+ KLN G+++PS H V++A  +  P  +S    RQP      ETP      TQ
Sbjct: 368 QIDRASKMAKLNGGKSTPSSHTVNIATSLPAPFLNSNAAVRQPSAKPHYETPP-----TQ 422

Query: 44  LQLPVDVDSALLQQ 3
           +QLP DVDSALLQQ
Sbjct: 423 MQLPADVDSALLQQ 436


>gb|EYU42656.1| hypothetical protein MIMGU_mgv1a0058602mg, partial [Mimulus
           guttatus]
          Length = 453

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 51/134 (38%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
 Frame = -1

Query: 323 YNAVPRSQTVGINP---QFSAAGLQNASGMAES---------------------VPGMTN 216
           YN  P  Q    +P   QFSA   QN S    S                     V    +
Sbjct: 294 YNDQPMLQNAATHPMHSQFSAPSFQNISSSTSSAMPENMDLRVHSLSVPEKKRMVTDSVD 353

Query: 215 QIDRPSKIMKLNDGRASPS-HAVHVAPPMSVPIPSSGIQGRQPLRAE--ETPDAGKQVTQ 45
           QIDR SK+ KLN G+++PS H V++A  +  P  +S    RQP      ETP      TQ
Sbjct: 354 QIDRASKMAKLNGGKSTPSSHTVNIATSLPAPFLNSNAAVRQPSAKPHYETPP-----TQ 408

Query: 44  LQLPVDVDSALLQQ 3
           +QLP DVDSALLQQ
Sbjct: 409 MQLPADVDSALLQQ 422


>ref|XP_006362619.1| PREDICTED: cleavage stimulation factor subunit 2-like [Solanum
           tuberosum]
          Length = 509

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 39/86 (45%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
 Frame = -1

Query: 251 SGMAESVPGMTNQID---RPSKIMKLNDGRASPSHAVHVAPPMSVPIPSSGIQGRQPLRA 81
           SG+ E   G    +D   RPSK  +LNDG +      +  P  SV  P SG    Q L A
Sbjct: 400 SGLPEVKRGAAYNLDLLSRPSKTARLNDGIS------YALPDASVSTPQSGCS-TQVLSA 452

Query: 80  EETPDAGKQVTQLQLPVDVDSALLQQ 3
            E  +A KQ TQ+QLP DV+SALLQQ
Sbjct: 453 AEMSNADKQATQVQLPSDVESALLQQ 478


>ref|XP_006349660.1| PREDICTED: cleavage stimulation factor subunit 2-like [Solanum
           tuberosum]
          Length = 509

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
 Frame = -1

Query: 251 SGMAESVPGMTNQID---RPSKIMKLNDGRASPSHAVHVAPPMSVPIPSSGIQGRQPLRA 81
           SG+ E      N +D   RPSK+ +LNDG +      +  P  SV  P SG    Q   A
Sbjct: 400 SGLPEEKRAAANNLDLLSRPSKMTRLNDGIS------YALPDASVSTPQSG-PSTQVSAA 452

Query: 80  EETPDAGKQVTQLQLPVDVDSALLQQ 3
            ET +  KQ +Q+QLP DV+SALLQQ
Sbjct: 453 AETSNPDKQASQVQLPSDVESALLQQ 478


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