BLASTX nr result

ID: Mentha25_contig00040309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00040309
         (393 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590227.1| Rpp4 candidate [Medicago truncatula] gi|3554...    61   1e-07
ref|XP_003636525.1| Cc-nbs-lrr resistance protein [Medicago trun...    58   1e-06
ref|XP_003590094.1| Rpp4 candidate [Medicago truncatula] gi|3554...    57   2e-06
ref|XP_003636218.1| Rpp4 candidate [Medicago truncatula] gi|3555...    56   5e-06

>ref|XP_003590227.1| Rpp4 candidate [Medicago truncatula] gi|355479275|gb|AES60478.1|
           Rpp4 candidate [Medicago truncatula]
          Length = 412

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
 Frame = -1

Query: 384 KLVSFCELKCDVELPSLRLVEINKCPKMKNLSLGFPAAPNLEVLTTDFNHHLEVGVH--- 214
           +L  FC   C ++ P L +V + +CP+M+  SLGF    NL+ + TD  +H E  ++   
Sbjct: 184 RLCRFCSCPCPIKFPLLEVVVVKECPRMELFSLGFTKTTNLQNVQTDEGNHWEGDLNRTI 243

Query: 213 -------ASFDRLKTLSIKDVGSIEYPFY---HHKFFIRYTLNGLEKLYLSRHRSMS--L 70
                   +F +LK L++ D   ++  +Y   H   F       L+ L + R   +S  L
Sbjct: 244 NKMFCDKVAFGKLKYLALSDYPELKDVWYGQLHCNVFC-----NLKHLVVERCDFLSHVL 298

Query: 69  FPSSIAEKLVNLRSLCIERCDEM 1
           FPS++ + L  L  L ++ CD +
Sbjct: 299 FPSNVMQVLQTLEELEVKDCDSL 321


>ref|XP_003636525.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355502460|gb|AES83663.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 2248

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 13/142 (9%)
 Frame = -1

Query: 387  PKLVSFCELKCDVELPSLRLVEINKCPKMKNLSLGFPAAPNLE---VLTTDFNHHLEVGV 217
            P LV FC  +C ++ PSL  V + +CP+MK  S G  + P L+   +   D   H +  +
Sbjct: 1457 PSLVKFCSSECFMKFPSLEKVIVGECPRMKIFSAGHTSTPILQKVKIAENDSEWHWKGNL 1516

Query: 216  HASF-----DRLKTLSIKDVGSIEYPFYHHKFFIRYTLNGLEKL-YLSRHR----SMSLF 67
            + +      D++  +S K +   EYP     ++ ++  N    L YL  H+    S  LF
Sbjct: 1517 NNTIYNMFEDKVGFVSFKHLQLSEYPELKELWYGQHEHNTFRSLKYLVVHKCDFLSDVLF 1576

Query: 66   PSSIAEKLVNLRSLCIERCDEM 1
              ++ E L+NL  L +E C+ +
Sbjct: 1577 QPNLLEVLMNLEELDVEDCNSL 1598


>ref|XP_003590094.1| Rpp4 candidate [Medicago truncatula] gi|355479142|gb|AES60345.1|
           Rpp4 candidate [Medicago truncatula]
          Length = 1039

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
 Frame = -1

Query: 387 PKLVSFCELKCDVELPSLRLVEINKCPKMKNLSLGFPAAPNLEVL---TTDFNHHLEVGV 217
           P++  FC   C +  P L +V + +CP+M+ LSLG    PNL+++    ++  +H E  +
Sbjct: 448 PRVCRFCSCPCPITFPLLEVVVVKECPRMELLSLGVTNTPNLQIVQIEESNEENHWEGDL 507

Query: 216 HAS----------FDRLKTLSIKDVGSIEYPFY---HHKFFIRYTLNGLEKLYLSR--HR 82
           + S          F   K L++ D   +E  +Y    H  F       L+ L + R    
Sbjct: 508 NRSVKKLFDDKVAFREFKYLALSDHSELEDIWYGRLDHNVFC-----NLKHLVVERCDFL 562

Query: 81  SMSLFPSSIAEKLVNLRSLCIERCDEM 1
           S  LFPS++ + L  L  L +  CD +
Sbjct: 563 SQVLFPSNVVQVLHGLEELEVRNCDSL 589


>ref|XP_003636218.1| Rpp4 candidate [Medicago truncatula] gi|355502153|gb|AES83356.1|
           Rpp4 candidate [Medicago truncatula]
          Length = 1053

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
 Frame = -1

Query: 384 KLVSFCELKCDVELPSLRLVEINKCPKMKNLSLGFPAAPNLEVLTTDFNHHLEVGVH--- 214
           +L  FC   C ++ P L ++ + +CP+M+  SLG     NL+ + TD  +H E  ++   
Sbjct: 460 RLCRFCSCPCPIKFPLLEVIVVKECPRMELFSLGVTNTTNLQNVQTDEGNHWEGDLNRTI 519

Query: 213 -------ASFDRLKTLSIKDVGSIEYPFY---HHKFFIRYTLNGLEKLYLSRHRSMS--L 70
                   +F + K L++ D   ++  +Y   H   F       L+ L + R   +S  L
Sbjct: 520 KKMFCDKVAFGKFKYLALSDYPELKDVWYGQLHCNVFC-----NLKHLVVERCDFLSHVL 574

Query: 69  FPSSIAEKLVNLRSLCIERCDEM 1
           FPS++ + L  L  L ++ CD +
Sbjct: 575 FPSNVMQVLQTLEELEVKDCDSL 597


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