BLASTX nr result

ID: Mentha25_contig00040286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00040286
         (338 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...    61   2e-07
ref|XP_007030646.1| 5'-3' exoribonuclease 4 isoform 2 [Theobroma...    59   5e-07
ref|XP_007030645.1| Exoribonuclease 4 isoform 1 [Theobroma cacao...    59   5e-07
gb|EYU37060.1| hypothetical protein MIMGU_mgv1a002926mg [Mimulus...    57   2e-06
ref|XP_006340038.1| PREDICTED: 5'-3' exoribonuclease 4-like isof...    56   6e-06
ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersic...    56   6e-06

>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 964

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 38/107 (35%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
 Frame = -1

Query: 311  NNMQIHRPIYNTQDRYSYQEQHHDLRSGMSALTIDGGPRGXXXXXXXXXXXXXSKVSS-- 138
            N +  +R  + TQDR  Y EQ+ DL++GMSALT++   +                 SS  
Sbjct: 835  NGVSSNRHNFRTQDRVQYHEQYRDLKTGMSALTMEENVKSRPPAVMSQRTQNTGYSSSLQ 894

Query: 137  ----QIPGPLPSPPSKWISKRRVESAEAEAYYRQ*TPVAAGHSGQVK 9
                Q  G LPSPP+KWI K      +AE Y+RQ T +   +  Q K
Sbjct: 895  QQFEQNLGALPSPPAKWIGK--ATDTDAEMYFRQETMLRGANEKQAK 939


>ref|XP_007030646.1| 5'-3' exoribonuclease 4 isoform 2 [Theobroma cacao]
            gi|508719251|gb|EOY11148.1| 5'-3' exoribonuclease 4
            isoform 2 [Theobroma cacao]
          Length = 869

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
 Frame = -1

Query: 320  PPPNNMQIHRPIYNTQDRYSYQEQHHDLRSGMSALTIDGGPRGXXXXXXXXXXXXXSKVS 141
            P  N MQ  R  +  QDR   QE+HHDL + MSALT+DG  +G              ++S
Sbjct: 743  PSSNGMQSIRNNFRAQDRLQNQERHHDLGTAMSALTLDGSAKG----------RAHVEMS 792

Query: 140  SQIP----------------GPLPSPPSKWISK---------RRVESAEAEAYYRQ 48
            SQ+P                G LP PP+KWI+K          + E+A + AY +Q
Sbjct: 793  SQMPNSGYPQNLGHRSEQNSGALPKPPTKWINKPVNVNTGTYLKQENASSVAYEKQ 848


>ref|XP_007030645.1| Exoribonuclease 4 isoform 1 [Theobroma cacao]
            gi|508719250|gb|EOY11147.1| Exoribonuclease 4 isoform 1
            [Theobroma cacao]
          Length = 990

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 25/116 (21%)
 Frame = -1

Query: 320  PPPNNMQIHRPIYNTQDRYSYQEQHHDLRSGMSALTIDGGPRGXXXXXXXXXXXXXSKVS 141
            P  N MQ  R  +  QDR   QE+HHDL + MSALT+DG  +G              ++S
Sbjct: 864  PSSNGMQSIRNNFRAQDRLQNQERHHDLGTAMSALTLDGSAKG----------RAHVEMS 913

Query: 140  SQIP----------------GPLPSPPSKWISK---------RRVESAEAEAYYRQ 48
            SQ+P                G LP PP+KWI+K          + E+A + AY +Q
Sbjct: 914  SQMPNSGYPQNLGHRSEQNSGALPKPPTKWINKPVNVNTGTYLKQENASSVAYEKQ 969


>gb|EYU37060.1| hypothetical protein MIMGU_mgv1a002926mg [Mimulus guttatus]
          Length = 625

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
 Frame = -1

Query: 272 DRYSYQEQHHDLRSGMSALTIDGG--PRGXXXXXXXXXXXXXSKVSSQIPGPLPSPPSKW 99
           DRY+YQEQ+ +LR+GMSALT++G    R               +      GPLPSPP KW
Sbjct: 513 DRYTYQEQYPELRNGMSALTLEGNFRSRPNSGQVSSSRSSNSGQPGQNTGGPLPSPPPKW 572

Query: 98  ISKRRVESAEAEAY---YRQ*TPVAAGHSGQVKI 6
           I +R   S  A  Y    +Q + ++  H  Q K+
Sbjct: 573 IDRRGGGSGNAVMYSGQQQQSSSLSGLHERQAKM 606


>ref|XP_006340038.1| PREDICTED: 5'-3' exoribonuclease 4-like isoform X1 [Solanum
            tuberosum] gi|565345954|ref|XP_006340039.1| PREDICTED:
            5'-3' exoribonuclease 4-like isoform X2 [Solanum
            tuberosum]
          Length = 978

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
 Frame = -1

Query: 320  PPPNNMQIHRPIYNTQDRYSYQEQHHDLRSGMSALTIDGGPRGXXXXXXXXXXXXXSKVS 141
            P P  +Q  R  +  Q+R+SYQ+Q+H +R+ MS LTI+ G R               ++S
Sbjct: 849  PSPYELQNTRQNFRMQERHSYQDQYHSMRNEMSVLTIESGAR-TRPYSTVARMPNSGQLS 907

Query: 140  SQIP--------GPLPSPPSKWISKRRVESAEAEAYYRQ*TPVAAGHSGQVK 9
            +  P        GPLPSPP +WI+K     A A     Q T     +  QVK
Sbjct: 908  NVCPPPPFTQNVGPLPSPPLQWINK-PARGATATYSKHQETSKGPAYDKQVK 958


>ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
            gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4
            [Solanum lycopersicum]
          Length = 978

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
 Frame = -1

Query: 320  PPPNNMQIHRPIYNTQDRYSYQEQHHDLRSGMSALTIDGGPRGXXXXXXXXXXXXXSKVS 141
            P P   Q  R  +  QDR+SYQ+Q+H +R+ MS LTI  G R               ++S
Sbjct: 849  PSPYEFQNTRQNFRIQDRHSYQDQYHSMRNEMSVLTIGSGAR-TRPPSNAARMPNSGQLS 907

Query: 140  SQIP--------GPLPSPPSKWISKRRVESAEAEAYYRQ*TPVAAGHSGQVK 9
            +  P        GPLPSPP +WI+K    +    + Y++ T     +  QVK
Sbjct: 908  NVCPPPPFTQNVGPLPSPPLQWINKPARGATAMHSKYQE-TSKGPAYDKQVK 958


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