BLASTX nr result

ID: Mentha25_contig00040129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00040129
         (486 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU24936.1| hypothetical protein MIMGU_mgv1a009918mg [Mimulus...    86   1e-31
ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...    74   6e-18
ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600...    68   4e-17
ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citr...    71   6e-17
ref|XP_007154594.1| hypothetical protein PHAVU_003G132000g [Phas...    69   1e-16
ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4...    70   2e-15
ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209...    69   4e-15
ref|XP_002516293.1| DNA binding protein, putative [Ricinus commu...    66   3e-14
emb|CBI27823.3| unnamed protein product [Vitis vinifera]               74   4e-14
ref|XP_007038340.1| DNA binding protein, putative isoform 2 [The...    79   5e-13
ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802...    68   6e-13
ref|XP_003541303.2| PREDICTED: uncharacterized protein LOC100782...    69   8e-13
ref|XP_006418592.1| hypothetical protein EUTSA_v10002636mg [Eutr...    61   1e-12
ref|XP_006288444.1| hypothetical protein CARUB_v10001705mg [Caps...    63   1e-12
ref|XP_004240014.1| PREDICTED: uncharacterized protein LOC101254...    78   1e-12
ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260...    77   2e-12
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]    77   2e-12
ref|NP_196500.1| RNA polymerase III RPC4 [Arabidopsis thaliana] ...    63   3e-12
ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III s...    77   3e-12
ref|XP_006587708.1| PREDICTED: DNA-directed RNA polymerase III s...    75   9e-12

>gb|EYU24936.1| hypothetical protein MIMGU_mgv1a009918mg [Mimulus guttatus]
          Length = 327

 Score = 85.5 bits (210), Expect(2) = 1e-31
 Identities = 35/45 (77%), Positives = 42/45 (93%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALEYDEN 485
           +EY+EPWDY +SYYPTTLPLRRPYSGNPE+LD  EFE+A+EYDE+
Sbjct: 136 REYKEPWDYENSYYPTTLPLRRPYSGNPELLDNSEFEDAVEYDED 180



 Score = 77.0 bits (188), Expect(2) = 1e-31
 Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
 Frame = +1

Query: 1   PPSPSRRKVKFAPKGP----PXXXXXXXXXXXXXDGGDENDSQQFLARRVAEHLARQGG- 165
           PP  + RKV+FAPK P    P             D  D+ ++Q+FL R+V EHLAR+G  
Sbjct: 5   PPKAAPRKVRFAPKEPRRRTPKPSSFKIEPAPEVDDTDDLEAQEFLTRKVKEHLARRGRP 64

Query: 166 KAEKKSPVRVTFSHGVAATSIRSFGRRRERTDDGSFAAYSEASATGEMQNHFTA 327
           K+E K  V+V FS+ V ++SIR+FGR++E +D G  A  S+      +QN  T+
Sbjct: 65  KSENKGRVQVAFSNDVGSSSIRTFGRQKESSDVGHDAVDSKELTPNGVQNLVTS 118


>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score = 73.6 bits (179), Expect(2) = 6e-18
 Identities = 35/48 (72%), Positives = 40/48 (83%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALE---YDEN 485
           KEY+EPWDY+ +YYP TLPLRRPYSGNPE+LD+ EF EA E   YDEN
Sbjct: 117 KEYKEPWDYY-TYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDEN 163



 Score = 42.7 bits (99), Expect(2) = 6e-18
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
 Frame = +1

Query: 19  RKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQQFLARRVAEHLARQGGKAEKK-SPVRV 195
           RKV+FAPK P              +  D   + + L R   E   +   KAEKK +P +V
Sbjct: 15  RKVRFAPKAPRRVPKSVVPKSEVAEDDDAAQANE-LMRHFNEASMKGKPKAEKKLAPTQV 73

Query: 196 TFSHGVAATSIRSFGRRRERTDDGSF 273
            F +G A+ SIRS+G  R  T+   +
Sbjct: 74  AFGYGGASASIRSYGTPRGATNSSRY 99


>ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600766 [Solanum tuberosum]
          Length = 283

 Score = 68.2 bits (165), Expect(2) = 4e-17
 Identities = 33/48 (68%), Positives = 38/48 (79%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEA---LEYDEN 485
           KEY EPWDY+ +Y P TLP+RRPYSGNPE+LD+ EF EA   L YDEN
Sbjct: 107 KEYTEPWDYYTNY-PVTLPVRRPYSGNPELLDEEEFGEASRSLTYDEN 153



 Score = 45.4 bits (106), Expect(2) = 4e-17
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +1

Query: 19  RKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQ-QFLARRVAEHLARQGGKAEKKSPVRV 195
           RKV+FAPKGPP                D + ++ + L +R  E  A+   K EKK P +V
Sbjct: 12  RKVRFAPKGPPRRAQKTVLPKPENVEADGDAAKAEELMQRFNEASAKVKHKVEKKGPTQV 71

Query: 196 TFSHGVAATSIRSFG 240
            F +G +++S++S+G
Sbjct: 72  AFGYGGSSSSLKSYG 86


>ref|XP_006428587.1| hypothetical protein CICLE_v10012311mg [Citrus clementina]
           gi|568853572|ref|XP_006480425.1| PREDICTED:
           uncharacterized protein LOC102622464 [Citrus sinensis]
           gi|557530644|gb|ESR41827.1| hypothetical protein
           CICLE_v10012311mg [Citrus clementina]
          Length = 303

 Score = 70.9 bits (172), Expect(2) = 6e-17
 Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALE---YDEN 485
           KEYQEPWDY+ SYYP +LPLRRPYSG+PE+LD+ EF EA E   YDE+
Sbjct: 118 KEYQEPWDYY-SYYPVSLPLRRPYSGSPELLDEEEFGEASETINYDES 164



 Score = 42.0 bits (97), Expect(2) = 6e-17
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
 Frame = +1

Query: 7   SPSRRKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQQFLARRVAEHLARQG-GKAEKK- 180
           S + RK+K+APK PP             +  D   +   L R  A   A +G  K EKK 
Sbjct: 10  SNATRKIKYAPKAPPRRVPKAEVKTEMVENADAAQAMDLLQRFNANQGALKGRPKVEKKV 69

Query: 181 SPVRVTFSHGVAATSIRSFG 240
           +P ++ F  G A+T I+S+G
Sbjct: 70  APSQIAFGQGGASTFIKSYG 89


>ref|XP_007154594.1| hypothetical protein PHAVU_003G132000g [Phaseolus vulgaris]
           gi|593783109|ref|XP_007154595.1| hypothetical protein
           PHAVU_003G132000g [Phaseolus vulgaris]
           gi|561027948|gb|ESW26588.1| hypothetical protein
           PHAVU_003G132000g [Phaseolus vulgaris]
           gi|561027949|gb|ESW26589.1| hypothetical protein
           PHAVU_003G132000g [Phaseolus vulgaris]
          Length = 291

 Score = 68.6 bits (166), Expect(2) = 1e-16
 Identities = 34/47 (72%), Positives = 37/47 (78%), Gaps = 3/47 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALE---YDE 482
           KEY EPWDY+ S YP TLPLRRPYSGNPE+LD+ EF EA E   YDE
Sbjct: 108 KEYTEPWDYY-SNYPVTLPLRRPYSGNPELLDEEEFGEAAEARTYDE 153



 Score = 43.5 bits (101), Expect(2) = 1e-16
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
 Frame = +1

Query: 1   PPSPSRRKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQ-QFLARRVAEHLARQGGKAEK 177
           P +P RRK KFAP+ PP             +    + +Q + L RR  E   +   K EK
Sbjct: 5   PSAPVRRKHKFAPRAPPRVVPKKEVKAEVVEDAQADANQAKDLLRRFNESAMKARNKVEK 64

Query: 178 K-SPVRVTFSHGVAATSIRSFG 240
           K S  ++ F +G  +TS++S+G
Sbjct: 65  KVSASQIAFGYGGESTSLKSYG 86


>ref|XP_007012676.1| DNA-directed RNA polymerase III subunit RPC4, putative [Theobroma
           cacao] gi|508783039|gb|EOY30295.1| DNA-directed RNA
           polymerase III subunit RPC4, putative [Theobroma cacao]
          Length = 294

 Score = 70.1 bits (170), Expect(2) = 2e-15
 Identities = 32/46 (69%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEF-EEALEYDEN 485
           KEY+EPWDY+ SYYP TLP+RRPYSGNPE LD+ EF  E + +DEN
Sbjct: 111 KEYREPWDYY-SYYPVTLPMRRPYSGNPEFLDEEEFASENITFDEN 155



 Score = 37.4 bits (85), Expect(2) = 2e-15
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +1

Query: 19  RKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQQFLARRVAEHLARQGGKAEKK-SPVRV 195
           RK++FAPK PP             +  D   ++  L +R+ +  A+   K EKK +  +V
Sbjct: 12  RKMRFAPKAPPRQAPKLEVKTEVVEDTDAVQARDLL-QRLNQTSAKTKPKVEKKVASSQV 70

Query: 196 TFSHGVAATSIRSFG 240
            F HG A+ S++ FG
Sbjct: 71  AFGHGGASASMKLFG 85


>ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209454 [Cucumis sativus]
           gi|449500539|ref|XP_004161125.1| PREDICTED:
           uncharacterized LOC101209454 [Cucumis sativus]
          Length = 293

 Score = 69.3 bits (168), Expect(2) = 4e-15
 Identities = 34/48 (70%), Positives = 38/48 (79%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEA---LEYDEN 485
           KEY EPWDY+ SYYP TLPLRRPYSGNP+ L++ EF EA   L YDEN
Sbjct: 108 KEYVEPWDYY-SYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDEN 154



 Score = 37.4 bits (85), Expect(2) = 4e-15
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
 Frame = +1

Query: 19  RKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQQFLARRVAEHLARQGGKAEKKSPVRVT 198
           RK+KFAPK P              +  D   ++  L R        +     K +P +V 
Sbjct: 14  RKLKFAPKAPVRRIPKPEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRKAAPTQVA 73

Query: 199 FSHGVAATSIRSFG----RRRERTDDGSFAA 279
           F  G +++++RS+G      R R +DG+  A
Sbjct: 74  FGSGGSSSTLRSYGVSKAGNRPRNEDGTLPA 104


>ref|XP_002516293.1| DNA binding protein, putative [Ricinus communis]
           gi|223544779|gb|EEF46295.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 286

 Score = 65.9 bits (159), Expect(2) = 3e-14
 Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEA---LEYDEN 485
           KEY EPW+Y+ SYYP TLPLRRPYSGNP  L+  EF EA    EYDEN
Sbjct: 112 KEYIEPWNYY-SYYPVTLPLRRPYSGNPATLNAEEFGEASDTSEYDEN 158



 Score = 37.7 bits (86), Expect(2) = 3e-14
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = +1

Query: 1   PPSPSRRKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQQFLARRVAEHLARQGGKAEKK 180
           PP    RK+K+ PK PP             +  D   + + L ++  E   R   KAEKK
Sbjct: 5   PPQDPPRKLKYMPKAPPRRPPKPEVKSEKAEDEDATQAMK-LMKQFQERSMRAKPKAEKK 63

Query: 181 -SPVRVTFSHGVAATSIRSF 237
               ++ F  G A+ SI+S+
Sbjct: 64  VQASQIAFGFGAASPSIKSY 83


>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score = 73.6 bits (179), Expect(2) = 4e-14
 Identities = 35/48 (72%), Positives = 40/48 (83%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALE---YDEN 485
           KEY+EPWDY+ +YYP TLPLRRPYSGNPE+LD+ EF EA E   YDEN
Sbjct: 127 KEYKEPWDYY-TYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDEN 173



 Score = 29.6 bits (65), Expect(2) = 4e-14
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
 Frame = +1

Query: 19  RKVKFAPKGP---PXXXXXXXXXXXXXDGGDENDSQQ-----FLARRVAEH--LARQGGK 168
           RKV+FAPK P   P             D    N+  +      L RR+  +  +      
Sbjct: 15  RKVRFAPKAPRRVPKSVVPKSEVAEDDDAAQANELMRHFNVFILWRRIIFYFFIFFLFCS 74

Query: 169 AEKKSPVRVTFSHGVAATSIRSFGRRRERTDDGSF 273
               +P +V F +G A+ SIRS+G  R  T+   +
Sbjct: 75  HNCMAPTQVAFGYGGASASIRSYGTPRGATNSSRY 109


>ref|XP_007038340.1| DNA binding protein, putative isoform 2 [Theobroma cacao]
           gi|508775585|gb|EOY22841.1| DNA binding protein,
           putative isoform 2 [Theobroma cacao]
          Length = 328

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 34/46 (73%), Positives = 40/46 (86%), Gaps = 2/46 (4%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEAL--EYDE 482
           +EY+EPWDYHH+YYP TLPLRRPYSG+PE+LD+ EF EA   EYDE
Sbjct: 142 REYREPWDYHHTYYPITLPLRRPYSGDPELLDQAEFVEAARKEYDE 187


>ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802173 [Glycine max]
          Length = 298

 Score = 67.8 bits (164), Expect(2) = 6e-13
 Identities = 33/48 (68%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALE---YDEN 485
           KEYQEPWDY+ S YP TLPLRRPYSGNP +LD  EF EA +   Y+EN
Sbjct: 113 KEYQEPWDYY-SNYPVTLPLRRPYSGNPALLDDEEFAEAAQSRTYEEN 159



 Score = 31.6 bits (70), Expect(2) = 6e-13
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
 Frame = +1

Query: 19  RKVKFAPKGPPXXXXXXXXXXXXXDGGD-ENDSQQFLARRVAEHLARQGGKAEKKSPV-- 189
           RK KF P+ PP             D  D E  +++ L +R  E  +    K + +  V  
Sbjct: 14  RKPKFKPRAPPRRVIKQEVKAEVVDDADAEQAAKENLLKRFNERESAMKAKYKVEKKVLA 73

Query: 190 -RVTFSHGVAATSIRSFG 240
            ++ F +G  +TS++S+G
Sbjct: 74  SQIAFGYGGESTSMKSYG 91


>ref|XP_003541303.2| PREDICTED: uncharacterized protein LOC100782982 [Glycine max]
          Length = 318

 Score = 68.9 bits (167), Expect(2) = 8e-13
 Identities = 35/48 (72%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALE---YDEN 485
           KEYQEPWDY  S YP TLPLRRPYSGNP +LD  EF EA E   YDEN
Sbjct: 117 KEYQEPWDYD-SNYPVTLPLRRPYSGNPALLDDQEFGEAAEPRAYDEN 163



 Score = 30.0 bits (66), Expect(2) = 8e-13
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
 Frame = +1

Query: 19  RKVKFAPKGPPXXXXXXXXXXXXXDGGD-----ENDSQQFLARRV--AEHLARQGGKAEK 177
           RK+KF P+ PP             D  D     E+ +++ L +R    E   +   K EK
Sbjct: 14  RKLKFKPRAPPRRVIKQEVKAEVADDVDVDADAEHAAKENLLKRFHERESAVKAKYKVEK 73

Query: 178 K-SPVRVTFSHGVAATSIRSFGRRRERTDDGSFAAYSEASAT 300
           K    ++ F +G  +TS++S+G  R     GS    +++SA+
Sbjct: 74  KVLASQIAFGYGGESTSMKSYGIPR----GGSSININQSSAS 111


>ref|XP_006418592.1| hypothetical protein EUTSA_v10002636mg [Eutrema salsugineum]
           gi|557096520|gb|ESQ37028.1| hypothetical protein
           EUTSA_v10002636mg [Eutrema salsugineum]
          Length = 274

 Score = 61.2 bits (147), Expect(2) = 1e-12
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +3

Query: 354 EYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALEYDEN 485
           EY+EPWDY+ SYYP TLPLRRPY+G+PE+LD  EF + +   E+
Sbjct: 98  EYKEPWDYY-SYYPITLPLRRPYAGDPELLDVEEFMQTVGNHED 140



 Score = 37.4 bits (85), Expect(2) = 1e-12
 Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = +1

Query: 10  PSRRKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQQF--LARRVAEHLARQGGKAEKKS 183
           P  RK+KFAPK PP             +  D+N+S Q   L RRV E   R+  K EKK 
Sbjct: 5   PPARKMKFAPKAPPKRVPKPEVKPEVVE--DDNNSAQATELLRRVTERSLRK-PKGEKKV 61

Query: 184 PVRVTFSHGVAATSIRSFGRRRERTDDGSFAAYSEASATGEMQ 312
           P       G    S RS     ++  +GS  A+  ++AT E++
Sbjct: 62  PASQVAWMGGVVNSTRS-----DKYLNGSAGAFG-SNATQEIE 98


>ref|XP_006288444.1| hypothetical protein CARUB_v10001705mg [Capsella rubella]
           gi|482557150|gb|EOA21342.1| hypothetical protein
           CARUB_v10001705mg [Capsella rubella]
          Length = 271

 Score = 62.8 bits (151), Expect(2) = 1e-12
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = +3

Query: 354 EYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALEYDEN 485
           EY+EPWDY+ SYYP TLPLRRPY+G+PEVLD  EF + +  +E+
Sbjct: 98  EYKEPWDYY-SYYPITLPLRRPYAGDPEVLDVEEFMQPVGNNED 140



 Score = 35.8 bits (81), Expect(2) = 1e-12
 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
 Frame = +1

Query: 10  PSRRKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQQFLARRVAEHLARQGGKAEKKSPV 189
           P  RK++FAPK PP             +    +     L RRV E   R+  K +KK P 
Sbjct: 5   PPARKMRFAPKAPPKRVPKPEVKPEVVENDSNSAQAMELLRRVTERSLRK-PKGDKKVPA 63

Query: 190 -RVTFSHGVAATSIRSFGRRRERTDDGSFAAYSEAS 294
            +V +  GV  +S      R  +  +GS  AY   S
Sbjct: 64  SQVAWMGGVVNSS------RSNKYLNGSTGAYGSTS 93


>ref|XP_004240014.1| PREDICTED: uncharacterized protein LOC101254492 [Solanum
           lycopersicum]
          Length = 373

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/48 (70%), Positives = 40/48 (83%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEA---LEYDEN 485
           KEY+EPWDYHHS YP TLPLRRPY+G+PE+L++ EF EA    EYDEN
Sbjct: 145 KEYKEPWDYHHSNYPVTLPLRRPYAGDPEILNEAEFGEAAKNAEYDEN 192



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 39/89 (43%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
 Frame = +1

Query: 7   SPSRRKVKFAPKGPPXXXXXXXXXXXXXDGG----DENDSQQFLARRVAEHLARQGGKAE 174
           S S RKVKFAPKGPP               G    D+N++ + + R+V E L RQ  K E
Sbjct: 9   SSSTRKVKFAPKGPPRRKKQNPAQPKNEADGNEDRDDNEAAEAVLRKVNERLTRQKPKTE 68

Query: 175 KKSPVRVTFSHGVAA-TSIRSFGRRRERT 258
           KK+ V V F+HGVA+ TS ++ G+ RE T
Sbjct: 69  KKAAVEVAFAHGVASPTSTKTSGKSRELT 97


>ref|XP_002263694.1| PREDICTED: uncharacterized protein LOC100260717 [Vitis vinifera]
           gi|297745083|emb|CBI38675.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 3/47 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEA---LEYDE 482
           K Y+EPWDY HSYYPTTLPLR+P+SG+PE+LD+ EF EA   LEYDE
Sbjct: 142 KRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFGEASTNLEYDE 188



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 40/91 (43%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = +1

Query: 7   SPSRRKVKFAPKGPPXXXXXXXXXXXXX-DGGDENDSQQFLARRVAEHLARQGGKAEKKS 183
           S S RKV+FAPK PP              +  DE    Q+L RRV E L RQG K EK S
Sbjct: 8   SVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQGPKVEKTS 67

Query: 184 PVRVTFSHGVAATS--IRSFGRRRERTDDGS 270
            V+V F  G A  S  IR+FG  R+   D S
Sbjct: 68  SVQVVFGPGAATPSDTIRTFGVHRDGNSDKS 98


>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
          Length = 348

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 3/47 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEA---LEYDE 482
           K Y+EPWDY HSYYPTTLPLR+P+SG+PE+LD+ EF EA   LEYDE
Sbjct: 142 KRYKEPWDYVHSYYPTTLPLRKPHSGDPEILDEAEFGEASTNLEYDE 188



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 40/91 (43%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = +1

Query: 7   SPSRRKVKFAPKGPPXXXXXXXXXXXXX-DGGDENDSQQFLARRVAEHLARQGGKAEKKS 183
           S S RKV+FAPK PP              +  DE    Q+L RRV E L RQG K EK S
Sbjct: 8   SVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQGPKVEKTS 67

Query: 184 PVRVTFSHGVAATS--IRSFGRRRERTDDGS 270
            V+V F  G A  S  IR+FG  R+   D S
Sbjct: 68  SVQVVFGPGAATPSDTIRTFGVHRDGNSDKS 98


>ref|NP_196500.1| RNA polymerase III RPC4 [Arabidopsis thaliana]
           gi|9955525|emb|CAC05464.1| putative protein [Arabidopsis
           thaliana] gi|332004001|gb|AED91384.1| RNA polymerase III
           RPC4 [Arabidopsis thaliana]
          Length = 272

 Score = 62.8 bits (151), Expect(2) = 3e-12
 Identities = 28/44 (63%), Positives = 36/44 (81%)
 Frame = +3

Query: 354 EYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALEYDEN 485
           EY+EPWDY+ SYYP TLP+RRPY+G+PEVLD  EF +A  + E+
Sbjct: 98  EYKEPWDYY-SYYPITLPMRRPYAGDPEVLDVEEFMQAGGHHED 140



 Score = 34.3 bits (77), Expect(2) = 3e-12
 Identities = 25/75 (33%), Positives = 30/75 (40%)
 Frame = +1

Query: 10  PSRRKVKFAPKGPPXXXXXXXXXXXXXDGGDENDSQQFLARRVAEHLARQGGKAEKKSPV 189
           P  RK+KFAPK PP             +    +     L RRV E   R+  KA+KK P 
Sbjct: 5   PPVRKMKFAPKAPPKRVPKPEVKPEVVEDNSNSAQASELLRRVNERSLRK-PKADKKVPA 63

Query: 190 RVTFSHGVAATSIRS 234
                 G    S RS
Sbjct: 64  SQVAWLGGVVNSTRS 78


>ref|XP_006355616.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like
           [Solanum tuberosum]
          Length = 368

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/48 (68%), Positives = 40/48 (83%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEALE---YDEN 485
           KEY+EPWDYHHS YP TLPLRRPY+G+PE+L++ EF EA +   YDEN
Sbjct: 143 KEYKEPWDYHHSNYPVTLPLRRPYAGDPEILNEAEFGEAAKNAVYDEN 190



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
 Frame = +1

Query: 7   SPSRRKVKFAPKGPPXXXXXXXXXXXXXDGG----DENDSQQFLARRVAEHLARQGGKAE 174
           S S RKVKFAPKGPP               G    D+N++ + + R+V E L RQ  K E
Sbjct: 9   SSSTRKVKFAPKGPPRRKKQNPAQPKNEADGNEDRDDNEAAEAILRKVNERLTRQKPKTE 68

Query: 175 KKSPVRVTFSHGVAA-TSIRSFGRRRERT 258
           KK  V V F+HGVA+ TS ++FG+ RE T
Sbjct: 69  KK--VEVAFTHGVASPTSTKTFGKSRELT 95


>ref|XP_006587708.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X2
           [Glycine max]
          Length = 292

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 33/48 (68%), Positives = 41/48 (85%), Gaps = 3/48 (6%)
 Frame = +3

Query: 351 KEYQEPWDYHHSYYPTTLPLRRPYSGNPEVLDKVEFEEA---LEYDEN 485
           +EY+EPWDY +SYYPTTLPLR+P SG+PE+LD+ EF EA   +EYDEN
Sbjct: 127 REYKEPWDYENSYYPTTLPLRKPNSGDPEILDEKEFGEAATSVEYDEN 174


Top