BLASTX nr result

ID: Mentha25_contig00040035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00040035
         (316 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...    98   1e-18
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...    81   1e-13
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...    79   5e-13
ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I sub...    77   2e-12
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise...    75   9e-12
emb|CBI29879.3| unnamed protein product [Vitis vinifera]               74   3e-11
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...    74   3e-11
ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Caps...    73   4e-11
ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I sub...    72   6e-11
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...    71   1e-10
ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana...    70   3e-10
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...    70   4e-10
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    69   7e-10
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...    69   7e-10
ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutr...    68   1e-09
ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arab...    68   1e-09
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...    65   7e-09
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...    64   2e-08
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...    64   2e-08
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...    64   2e-08

>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 52/123 (42%), Positives = 79/123 (64%), Gaps = 19/123 (15%)
 Frame = -3

Query: 314  KGASDEEDHEDMDTSKDEGAEHSGKEDETRDEQNANE----------GSTRSKKT----- 180
            KG SD E+ E+ +T KDE +EH+  +DE  + QN +E          GS++ K +     
Sbjct: 1422 KGKSDVENLEEDETGKDEESEHTDDKDEASNVQNEDEAISEGTKSSVGSSKGKTSFDKSS 1481

Query: 179  ----DAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLV 12
                  KIRRA   V + + FEVHF+F  EPH+L+AQ+AQKT++KV++++SG++SQC++V
Sbjct: 1482 VELKGKKIRRAFYMVVKGTKFEVHFEFHEEPHMLIAQLAQKTSKKVYIRKSGKVSQCKMV 1541

Query: 11   QYD 3
             YD
Sbjct: 1542 SYD 1544


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/114 (37%), Positives = 71/114 (62%), Gaps = 13/114 (11%)
 Frame = -3

Query: 305  SDEEDHEDMDTSKDEGAEHSGKEDETRDEQNANEGSTRSK-KTDAKIRRAVKHVFERSS- 132
            +DE D+ D + + D G E    + ++ +E  +N  +++SK KT  K ++  +   ++ S 
Sbjct: 1393 TDEIDNGDEEENGDRGNEEHTSKLQSTEEDISNTKTSKSKTKTTVKQKKKKERRSKKDSD 1452

Query: 131  -----------FEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYD 3
                       FEVHF+F  EPH+LLAQ+AQKTA+KV++K SG++ QCR+V+Y+
Sbjct: 1453 RCVFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYE 1506


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 35/100 (35%), Positives = 62/100 (62%)
 Frame = -3

Query: 302  DEEDHEDMDTSKDEGAEHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSSFEV 123
            +EE    + +++D+ +     + +T+ +    +   + +++     R V    E   FEV
Sbjct: 1405 NEEQMSKLQSTEDDISNTKSSKSKTKTKTTVKQNKKKERRSKKDSDRCVFVDVEGLHFEV 1464

Query: 122  HFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLVQYD 3
            HF+F  EPH+LLAQ+AQKTA+KV++K SG++ QCR+V+Y+
Sbjct: 1465 HFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYE 1504


>ref|XP_004513648.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1650

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/100 (41%), Positives = 58/100 (58%)
 Frame = -3

Query: 311  GASDEEDHEDMDTSKDEGAEHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSS 132
            G  DE+   D D S  E  E+  K     +     E +++S+    K  R V   FE+  
Sbjct: 1376 GKDDEDGKGDEDGSDIEVNENDKKVTLGANYSQGPEENSKSQPVSKKFDRRVYVKFEKRH 1435

Query: 131  FEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLV 12
            FE+HFKFT EPH+LLAQIAQKTA+KV ++  G++ QC+ +
Sbjct: 1436 FEIHFKFTGEPHILLAQIAQKTAEKVCIQNFGKVGQCKAI 1475


>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
          Length = 1626

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
 Frame = -3

Query: 299  EEDHEDMDTSKDEGAEHSGKEDETRDEQNANEGSTRSKKTDAKI--------RRAVKHVF 144
            ++DH+D D      +E +  E      +  +  +  S+K D            RA+    
Sbjct: 1349 DDDHDDYD---QRSSEKNMVEKPILKGRKKSVAAITSEKIDLSTMPSTGKRENRAIYMEI 1405

Query: 143  ERSSFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRS-GEMSQCRLVQYD 3
            E  S EVHFKFT+EPHVLLAQ+ QKTA+KV++K++ G+++QC+LVQYD
Sbjct: 1406 EGLSLEVHFKFTSEPHVLLAQVVQKTAKKVYVKKTGGKLNQCKLVQYD 1453


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 36/135 (26%)
 Frame = -3

Query: 308  ASDEEDHEDMDTSKDEGAEHSGK-------EDETRDEQNANEGSTRSKKTDAKIR----- 165
            ASDE D+ D +   DEG   +G        EDE     N   G +  K  D+K+      
Sbjct: 1360 ASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKS 1419

Query: 164  ----------------RAVKHVFERSS--------FEVHFKFTTEPHVLLAQIAQKTAQK 57
                            RA+K  F+R+         FEVHF+FT EPH+LLAQIAQK A K
Sbjct: 1420 SKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANK 1479

Query: 56   VFLKRSGEMSQCRLV 12
            V+++ SG++  C+++
Sbjct: 1480 VYIRSSGKIDLCQVI 1494


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 36/135 (26%)
 Frame = -3

Query: 308  ASDEEDHEDMDTSKDEGAEHSGK-------EDETRDEQNANEGSTRSKKTDAKIR----- 165
            ASDE D+ D +   DEG   +G        EDE     N   G +  K  D+K+      
Sbjct: 1431 ASDEMDYGDSEGEPDEGEPSAGLTEEIDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKS 1490

Query: 164  ----------------RAVKHVFERSS--------FEVHFKFTTEPHVLLAQIAQKTAQK 57
                            RA+K  F+R+         FEVHF+FT EPH+LLAQIAQK A K
Sbjct: 1491 SKNKKAKTEAKRKKRFRAIKKDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANK 1550

Query: 56   VFLKRSGEMSQCRLV 12
            V+++ SG++  C+++
Sbjct: 1551 VYIRSSGKIDLCQVI 1565


>ref|XP_006290488.1| hypothetical protein CARUB_v10016563mg [Capsella rubella]
            gi|482559195|gb|EOA23386.1| hypothetical protein
            CARUB_v10016563mg [Capsella rubella]
          Length = 1651

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 26/124 (20%)
 Frame = -3

Query: 314  KGASDEEDHED-MDTSKDEGAEHSGKEDETRDEQN-----ANEGSTRSKKTDAKIRRAV- 156
            K A+DE D+E+  +   +E +  SG ED   D +N     + EG+   +K   K++    
Sbjct: 1350 KQATDEMDYEENSEDETNEPSSISGVEDPEIDNENEDVEVSKEGTPEQQKEVKKVKNVKQ 1409

Query: 155  ---------------KHVF---ERSSFEVHFKF-TTEPHVLLAQIAQKTAQKVFLKRSGE 33
                           +H+F   E   FEVHFKF T+EPH+LLAQIAQKTAQKV+++ SG+
Sbjct: 1410 QSKKKRRKYVGADEDRHIFVKGEGEKFEVHFKFPTSEPHILLAQIAQKTAQKVYIQNSGK 1469

Query: 32   MSQC 21
            + +C
Sbjct: 1470 IERC 1473


>ref|XP_004513652.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Cicer
            arietinum]
          Length = 1660

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 20/121 (16%)
 Frame = -3

Query: 314  KGASDEEDHEDMDTSKDEGAEHSGKEDETRDEQNANEG----------------STRSKK 183
            +G  D +D+E +    D   +  GK DE   +   NE                 +++S+ 
Sbjct: 1365 EGVEDAKDNEHVKDDGDGKDDEDGKGDEDGSDIEVNENDKKVTLGVNYSQGPEENSKSQP 1424

Query: 182  TDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLAQ----IAQKTAQKVFLKRSGEMSQCRL 15
               K  R V   FE+  FE+HFKFT EPH+LLAQ    IAQKTA+KV ++  G++ QC+ 
Sbjct: 1425 VSKKFDRRVYVKFEKRHFEIHFKFTDEPHILLAQLLSTIAQKTAEKVCIQNFGKVGQCKA 1484

Query: 14   V 12
            +
Sbjct: 1485 I 1485


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/98 (34%), Positives = 56/98 (57%)
 Frame = -3

Query: 305  SDEEDHEDMDTSKDEGAEHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSSFE 126
            ++E  +   D +  EG E   K     ++QN      +S+ T  K  RA+    +   FE
Sbjct: 1379 ANENYNNVTDANNSEGLEKPSKSKTIDEKQNLKREKKKSEPTTKKYDRAIFVEAKGKHFE 1438

Query: 125  VHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLV 12
            +HF+FT EPH+LL QIAQ+TA+KV ++  G++ +C+ +
Sbjct: 1439 IHFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAI 1476


>ref|NP_191325.1| nuclear RNA polymerase A1 [Arabidopsis thaliana]
            gi|4678281|emb|CAB41189.1| DNA-directed RNA polymerase I
            190K chain-like protein [Arabidopsis thaliana]
            gi|332646163|gb|AEE79684.1| nuclear RNA polymerase A1
            [Arabidopsis thaliana]
          Length = 1670

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
 Frame = -3

Query: 299  EEDHEDMDTSKDEGAEHSGKEDETRDE-QNANEGSTRSKKTDAKIRRAV--KHVF---ER 138
            + ++ED + SK++  E   +  E + E +       +SKK   K  RA   +H+F   E 
Sbjct: 1393 DSENEDTEVSKEDTPEPQEESMEPQKEVKGVKNVKEQSKKKRRKFVRAKSDRHIFVKGEG 1452

Query: 137  SSFEVHFKFTTE-PHVLLAQIAQKTAQKVFLKRSGEMSQC 21
              FEVHFKF T+ PH+LLAQIAQ+TAQKV+++ SG++ +C
Sbjct: 1453 EKFEVHFKFATDDPHILLAQIAQQTAQKVYIQNSGKIERC 1492


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/83 (43%), Positives = 50/83 (60%)
 Frame = -3

Query: 263  EGAEHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERSSFEVHFKFTTEPHVLLA 84
            E   H  K  + + +  A   S  SK  D    RA+     +  FEVHFKFT EPH+LLA
Sbjct: 1432 ESPSHGEKSKDKKKKPKAKRKSRISKDFD----RAIFVEARKMHFEVHFKFTNEPHILLA 1487

Query: 83   QIAQKTAQKVFLKRSGEMSQCRL 15
            +IAQKTA+KV+++  G++ QCR+
Sbjct: 1488 EIAQKTAKKVYIQNPGKIEQCRV 1510


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 41/101 (40%), Positives = 56/101 (55%)
 Frame = -3

Query: 314  KGASDEEDHEDMDTSKDEGAEHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERS 135
            K ++ E   E +D SK    E   K  ET  E+   +     K+TD  I    K     +
Sbjct: 1384 KDSASENQPEIVDVSKSMSKE---KTTETSKEKKKVKSELVRKETDRSIFVEAKE----N 1436

Query: 134  SFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLV 12
             FEVHFKFT EPH LL+QI Q+ AQKV ++RSG++ QC+ +
Sbjct: 1437 HFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQI 1477


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 41/101 (40%), Positives = 56/101 (55%)
 Frame = -3

Query: 314  KGASDEEDHEDMDTSKDEGAEHSGKEDETRDEQNANEGSTRSKKTDAKIRRAVKHVFERS 135
            K ++ E   E +D SK    E   K  ET  E+   +     K+TD  I    K     +
Sbjct: 1382 KDSASENQPEIVDVSKSMSKE---KTTETSKEKKKVKSELVRKETDRSIFVEAKE----N 1434

Query: 134  SFEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLV 12
             FEVHFKFT EPH LL+QI Q+ AQKV ++RSG++ QC+ +
Sbjct: 1435 HFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQI 1475


>ref|XP_006402858.1| hypothetical protein EUTSA_v10005738mg [Eutrema salsugineum]
            gi|557103957|gb|ESQ44311.1| hypothetical protein
            EUTSA_v10005738mg [Eutrema salsugineum]
          Length = 1697

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
 Frame = -3

Query: 296  EDHEDMDTSKDEGAEHSGKEDETRDEQNANEGSTRSKK--TDAKIRRAVKHVFERSSFEV 123
            E  ED D SK+E  E        ++ +N  EGS + ++     K  R +   F+  +FEV
Sbjct: 1431 EPQEDADVSKEETLEPQ------KEVKNVEEGSRKKRRKFVPGKNDRHIFAKFKGKTFEV 1484

Query: 122  HFKFTTE-PHVLLAQIAQKTAQKVFLKRSGEMSQ 24
            HFKF +E PH+LL+QIAQKTAQKV+++ SG++ +
Sbjct: 1485 HFKFLSEEPHILLSQIAQKTAQKVYIQNSGKIER 1518


>ref|XP_002876429.1| hypothetical protein ARALYDRAFT_486216 [Arabidopsis lyrata subsp.
            lyrata] gi|297322267|gb|EFH52688.1| hypothetical protein
            ARALYDRAFT_486216 [Arabidopsis lyrata subsp. lyrata]
          Length = 1678

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
 Frame = -3

Query: 296  EDHEDMDTSKDEGAEHSGKEDETRDEQNANEGSTRSKKTDAKIRRAV--KHVFERSS--- 132
            E  E+ D SK+E  E    + E +  +N  E   +SKK   K   A   +H+F R     
Sbjct: 1409 EPQEEADVSKEETME---PQKEVKAVKNVKE---QSKKKRRKFVGATSDRHIFVRGEGEK 1462

Query: 131  FEVHFKFTTE-PHVLLAQIAQKTAQKVFLKRSGEMSQC 21
            FEVHF+F T+ PH+LLAQIAQKTAQKV+++ SG++ +C
Sbjct: 1463 FEVHFQFATDDPHILLAQIAQKTAQKVYIQDSGKIERC 1500


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 22/118 (18%)
 Frame = -3

Query: 299  EEDHEDMDTSKDEGAEHSGKEDETRD--EQNANEGSTRSKKTDAKIR-----RAVKHVFE 141
            EE+  D + S+D      GK+DE  +  E N ++       +D  +      ++ K  FE
Sbjct: 1337 EEETHDGEKSEDVEVSEDGKDDEDDNGVEVNGDDSDIEVNDSDKNVTLEETSKSKKRKFE 1396

Query: 140  RSS---------------FEVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRLV 12
             +S               FE+HFKF  EPH+LLAQIAQ+TA+KV ++  G++ QC+ +
Sbjct: 1397 PASKKYDRRVYVKAGGMRFEIHFKFIGEPHILLAQIAQRTAEKVCIQNFGKVGQCKAI 1454


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
 Frame = -3

Query: 278  DTSKDEGAEHSGKED-----ETRDEQNANEGSTRSKKTDAKI-----RRAVKHVFERSSF 129
            D  KDE ++ S   +     ++R+E+  +E   + KK  AK       RA+ +      F
Sbjct: 1128 DNGKDEISQSSPNLENRSNPKSREEKTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCF 1185

Query: 128  EVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRL 15
            EVHFK   EPH+LLAQIA+KTA+KV+++  G++ QCR+
Sbjct: 1186 EVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRV 1223


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
 Frame = -3

Query: 278  DTSKDEGAEHSGKED-----ETRDEQNANEGSTRSKKTDAKI-----RRAVKHVFERSSF 129
            D  KDE ++ S   +     ++R+E+  +E   + KK  AK       RA+ +      F
Sbjct: 1131 DNGKDEISQSSPNLENRSNPKSREEKTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCF 1188

Query: 128  EVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRL 15
            EVHFK   EPH+LLAQIA+KTA+KV+++  G++ QCR+
Sbjct: 1189 EVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRV 1226


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
 Frame = -3

Query: 278  DTSKDEGAEHSGKED-----ETRDEQNANEGSTRSKKTDAKI-----RRAVKHVFERSSF 129
            D  KDE ++ S   +     ++R+E+  +E   + KK  AK       RA+ +      F
Sbjct: 1420 DNGKDEISQSSPNLENRSNPKSREEKTGSE--PKRKKMKAKFVRKESDRAIFNAIRGLCF 1477

Query: 128  EVHFKFTTEPHVLLAQIAQKTAQKVFLKRSGEMSQCRL 15
            EVHFK   EPH+LLAQIA+KTA+KV+++  G++ QCR+
Sbjct: 1478 EVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRV 1515


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