BLASTX nr result
ID: Mentha25_contig00039488
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00039488
(886 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU45362.1| hypothetical protein MIMGU_mgv1a022609mg [Mimulus... 383 e-104
gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis] 322 1e-85
ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containi... 318 2e-84
ref|XP_007206704.1| hypothetical protein PRUPE_ppa023974mg [Prun... 317 4e-84
ref|XP_002309826.2| pentatricopeptide repeat-containing family p... 316 9e-84
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 316 9e-84
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 315 1e-83
gb|EPS68102.1| hypothetical protein M569_06665 [Genlisea aurea] 314 3e-83
ref|XP_006428510.1| hypothetical protein CICLE_v100138542mg, par... 306 9e-81
ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Popu... 305 1e-80
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,... 305 1e-80
ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containi... 302 1e-79
ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containi... 302 1e-79
ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containi... 301 3e-79
ref|XP_007029499.1| Pentatricopeptide repeat (PPR) superfamily p... 300 4e-79
ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containi... 294 3e-77
ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containi... 294 3e-77
ref|NP_188439.2| pentatricopeptide repeat-containing protein [Ar... 294 4e-77
ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata] g... 294 4e-77
gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis th... 294 4e-77
>gb|EYU45362.1| hypothetical protein MIMGU_mgv1a022609mg [Mimulus guttatus]
Length = 1479
Score = 383 bits (983), Expect = e-104
Identities = 193/294 (65%), Positives = 238/294 (80%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++M+S GR+PDAVTYTVLIDSLGKA+KMAEAA+VMSEMLNTG RPT+RTYSALICGY
Sbjct: 427 QIYRDMKSLGRNPDAVTYTVLIDSLGKASKMAEAANVMSEMLNTGTRPTLRTYSALICGY 486
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG+R AEE FDCM RSGIKPD LAYSVMLDVH+RS N+KK+++LY++MV +G+ PD
Sbjct: 487 AKAGEREEAEEIFDCMRRSGIKPDNLAYSVMLDVHLRSNNSKKAMLLYEEMVRNGFTPDR 546
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
+YE LIR+LA ++NE C++KVV IS++LTK G DFAA+KL+LA +
Sbjct: 547 GLYETLIRVLAGENNEECIQKVVEDLEEMHGLSPEMISSVLTKGGSFDFAAKKLRLAITQ 606
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
D+ NL+SIL SYSLSGRH+EAIELLNF++E+A GS+Q I+EALVVI C A QL+AA
Sbjct: 607 GRTFDRENLISILTSYSLSGRHTEAIELLNFMQEHASGSQQFISEALVVIRCKAHQLDAA 666
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
LDEY KNN+L F GS AM+E LI+SC ENE F EASQI+SDM+ + IEPSA++
Sbjct: 667 LDEYYKNNNLHTFNGSYAMYESLIMSCGENECFAEASQIFSDMRFHAIEPSAEI 720
Score = 77.8 bits (190), Expect = 5e-12
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 7/248 (2%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y M+ AG P Y V+I L +A ++ + ++SEM G P + Y+ L+ Y K
Sbjct: 882 YHGMKVAGYLPTMHLYRVMIGLLCRAKQVRDVEAMVSEMEEMGFTPDLSIYNMLLQLYTK 941
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
+ + + SG++PD+ Y ++ ++ R +++V+L ++M G PDL
Sbjct: 942 IEDYKKTVQVYQRIQESGLEPDEETYKTLILMYCRDCRPEEAVLLMREMRQLGLNPDLDT 1001
Query: 371 YEALI-----RLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLA 535
Y++LI +L+ E++ E L + + + ++ N AEKL L
Sbjct: 1002 YKSLIAAFCKKLMLEEAEE--LFNGLQTEGHKLNRSFYHLMMKMYRSSENYTKAEKL-LE 1058
Query: 536 AMKNSRVD--QGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNAR 709
+MK S V+ + +++SY SG EA ++LN +K N L +++ Y
Sbjct: 1059 SMKESGVEPNAATMYLLMSSYGSSGHPVEAEKVLNSLKSNGSNVSTLTYSSVIDAYLKNG 1118
Query: 710 QLEAALDE 733
LE + +
Sbjct: 1119 DLEIGIQK 1126
Score = 67.0 bits (162), Expect = 9e-09
Identities = 58/287 (20%), Positives = 122/287 (42%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ + A ++ + V T++ Y+A++ YA+ G+ +E
Sbjct: 193 PNARMLATILSVLGKANQESLAVEIFTRA-EQSVGNTVQVYNAMMGVYARNGRFPKVQEM 251
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M G +PD ++++ +++ ++S + L ++ G PD+ Y LI
Sbjct: 252 LDLMRERGCEPDLVSFNTLINARMKSGPSTPNLGIELLDEVRRSGIQPDIITYNTLISGC 311
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILT---KAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E +K +A+++ + G + A K KN D
Sbjct: 312 SRESNLEEAVKVFHDMEAHKCQPDLWTYNAMISVCGRCGLSGEAERLFKELGSKNFLPDA 371
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + + +++ ++ ++ + + AL Y
Sbjct: 372 VTYNSLLYAFAREGNVEKVEEICQEMVKMGFAKDEMTYNTIIYMHGKQGRHDLALQIYRD 431
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
SL + LI S + + EA+ + S+M G P+ +
Sbjct: 432 MKSLGR-NPDAVTYTVLIDSLGKASKMAEAANVMSEMLNTGTRPTLR 477
Score = 65.9 bits (159), Expect = 2e-08
Identities = 59/218 (27%), Positives = 91/218 (41%), Gaps = 6/218 (2%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+ +Q +G PD TY LI + + EA +M EM G+ P + TY +LI +
Sbjct: 950 QVYQRIQESGLEPDEETYKTLILMYCRDCRPEEAVLLMREMRQLGLNPDLDTYKSLIAAF 1009
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AEE F+ + G K ++ Y +M+ ++ S+N K+ L + M G P+
Sbjct: 1010 CKKLMLEEAEELFNGLQTEGHKLNRSFYHLMMKMYRSSENYTKAEKLLESMKESGVEPNA 1069
Query: 365 AMYEALIRLLAEDSN----ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKL 532
A L+ + E+ L + + K G D KL
Sbjct: 1070 ATMYLLMSSYGSSGHPVEAEKVLNSLKSNGSNVSTLTYSSVIDAYLKNG--DLEIGIQKL 1127
Query: 533 AAMKNSRVDQGNLL--SILASYSLSGRHSEAIELLNFV 640
MKN +D + + + + SL SEA LLN V
Sbjct: 1128 LEMKNEGLDPDHRIWTCFIRAASLCHSFSEATMLLNAV 1165
Score = 65.5 bits (158), Expect = 3e-08
Identities = 59/294 (20%), Positives = 115/294 (39%), Gaps = 8/294 (2%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY LI + + + EA V +M +P + TY+A+I + G
Sbjct: 291 EVRRSGIQPDIITYNTLISGCSRESNLEEAVKVFHDMEAHKCQPDLWTYNAMISVCGRCG 350
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
AE F + PD + Y+ +L R N +K + Q+MV G+ D Y
Sbjct: 351 LSGEAERLFKELGSKNFLPDAVTYNSLLYAFAREGNVEKVEEICQEMVKMGFAKDEMTYN 410
Query: 377 ALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILT----KAGCNDFAAEKLKLAAMK 544
+I + + ++ +L KA AA +
Sbjct: 411 TIIYMHGKQGRHDLALQIYRDMKSLGRNPDAVTYTVLIDSLGKASKMAEAANVMSEMLNT 470
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+R +++ Y+ +G EA E+ + ++ + + L ++ ++ + + A
Sbjct: 471 GTRPTLRTYSALICGYAKAGEREEAEEIFDCMRRSGIKPDNLAYSVMLDVHLRSNNSKKA 530
Query: 725 L---DEYNKNNSLCMFKGSTAMFEYLI-VSCAENERFVEASQIYSDMKLYGIEP 874
+ +E +N F ++E LI V EN + +++G+ P
Sbjct: 531 MLLYEEMVRNG----FTPDRGLYETLIRVLAGENNEECIQKVVEDLEEMHGLSP 580
Score = 63.5 bits (153), Expect = 1e-07
Identities = 35/125 (28%), Positives = 63/125 (50%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+KE+ S PDAVTY L+ + + + + ++ EM+ G TY+ +I + K
Sbjct: 359 FKELGSKNFLPDAVTYNSLLYAFAREGNVEKVEEICQEMVKMGFAKDEMTYNTIIYMHGK 418
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G+ LA + + M G PD + Y+V++D ++ ++ + +M++ G P L
Sbjct: 419 QGRHDLALQIYRDMKSLGRNPDAVTYTVLIDSLGKASKMAEAANVMSEMLNTGTRPTLRT 478
Query: 371 YEALI 385
Y ALI
Sbjct: 479 YSALI 483
Score = 62.4 bits (150), Expect = 2e-07
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 5/212 (2%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+ +M++ PD TY +I G+ EA + E+ + P TY++L+ +A+
Sbjct: 324 FHDMEAHKCQPDLWTYNAMISVCGRCGLSGEAERLFKELGSKNFLPDAVTYNSLLYAFAR 383
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G EE M++ G D++ Y+ ++ +H + ++ +Y+DM S G PD
Sbjct: 384 EGNVEKVEEICQEMVKMGFAKDEMTYNTIIYMHGKQGRHDLALQIYRDMKSLGRNPDAVT 443
Query: 371 YEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAIL----TKAGCNDFAAEKLKLAA 538
Y LI L + S V+ R + L KAG + A E
Sbjct: 444 YTVLIDSLGKASKMAEAANVMSEMLNTGTRPTLRTYSALICGYAKAGEREEAEEIFD--C 501
Query: 539 MKNSRVDQGNL-LSILASYSLSGRHSEAIELL 631
M+ S + NL S++ L +S+ LL
Sbjct: 502 MRRSGIKPDNLAYSVMLDVHLRSNNSKKAMLL 533
Score = 60.8 bits (146), Expect = 7e-07
Identities = 59/287 (20%), Positives = 121/287 (42%), Gaps = 2/287 (0%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD V++ LI++ K+ +++ E+ +G++P I TY+ LI G ++
Sbjct: 255 MRERGCEPDLVSFNTLINARMKSGPSTPNLGIELLDEVRRSGIQPDIITYNTLISGCSRE 314
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + F M +PD Y+ M+ V R + ++ L++++ S ++PD Y
Sbjct: 315 SNLEEAVKVFHDMEAHKCQPDLWTYNAMISVCGRCGLSGEAERLFKELGSKNFLPDAVTY 374
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+L+ A + N ++KV + E +K+ K
Sbjct: 375 NSLLYAFAREGN---VEKV------------------------EEICQEMVKMGFAK--- 404
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +I+ + GRH A+++ +K + + L+ A ++ A +
Sbjct: 405 -DEMTYNTIIYMHGKQGRHDLALQIYRDMKSLGRNPDAVTYTVLIDSLGKASKMAEAANV 463
Query: 734 YNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
++ + + + + LI A+ EA +I+ M+ GI+P
Sbjct: 464 MSEMLNTGT-RPTLRTYSALICGYAKAGEREEAEEIFDCMRRSGIKP 509
>gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis]
Length = 1494
Score = 322 bits (825), Expect = 1e-85
Identities = 161/292 (55%), Positives = 216/292 (73%)
Frame = +2
Query: 2 FQSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICG 181
FQ Y++M++AGR PDA+TYTVLIDSLGKANK+ EAA+VMS ML+ GV+PT+RTYSALI G
Sbjct: 461 FQLYRDMKTAGRTPDAITYTVLIDSLGKANKITEAANVMSGMLDAGVKPTLRTYSALISG 520
Query: 182 YAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPD 361
YAKAG + A++TFDCM+RSGI+PD++AYSVMLD+ +R TKK++ LY++M+ DG++PD
Sbjct: 521 YAKAGMQVDAQKTFDCMVRSGIRPDQIAYSVMLDMFLRFNETKKAMALYREMLRDGFIPD 580
Query: 362 LAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
+Y ++R+L ++ ++KV+ IS+IL K C D AA+ L+LA
Sbjct: 581 NGLYGVMVRVLGRENKSDAIEKVIRDMELLCGKNPQVISSILVKGECYDQAAKLLRLAIT 640
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEA 721
+D+ NLLSIL+SYS SGRHSEA ELL F++E+APGS QLIAEALVVI C ARQ +A
Sbjct: 641 SGYELDRENLLSILSSYSSSGRHSEAQELLEFLREHAPGSNQLIAEALVVILCKARQFQA 700
Query: 722 ALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
AL+EY K F S+ M+E +I C ENE F +ASQ++SDM+ +G+E S
Sbjct: 701 ALEEYGKTKGFHSFSRSSIMYESMIQGCKENELFGDASQVFSDMRFFGVELS 752
Score = 77.0 bits (188), Expect = 9e-12
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD V++ LI++ K+ MA A +++ E+ +G+RP I TY+ L+ G ++
Sbjct: 290 MRERGCEPDLVSFNTLINARLKSGAMAPNLAIELLDEVRRSGLRPDIITYNTLLSGCSRE 349
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + F+ M+R +PD Y+ M+ V R K+ L++++ S G++PD Y
Sbjct: 350 SNLEEATKVFEDMVRHHCQPDLWTYNAMISVFGRCGMPSKADKLFKELESRGFLPDAVTY 409
Query: 374 EALIRLLAEDSNERCLKKV 430
+L+ A D N +K++
Sbjct: 410 NSLLYAFARDGNVEKVKEI 428
Score = 77.0 bits (188), Expect = 9e-12
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 4/216 (1%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y+++Q AG PD TY LI K ++ E +M EM N G+ P + TY +LI ++K
Sbjct: 987 YQQIQEAGLSPDEDTYNTLIIMYCKDSRPEEGLSLMREMRNQGLEPKLDTYKSLISAFSK 1046
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
AEE F+ + +G K D+ Y M+ V SKN K+ +L M G P+ A
Sbjct: 1047 QQLYDQAEELFEELRSNGRKLDRSFYHTMIKVFRNSKNPSKAEMLVTMMKEAGMEPNFAT 1106
Query: 371 YEALIRLLAEDSN----ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAA 538
L+ E+ L+ + + K G + A +KLK
Sbjct: 1107 MHLLMVSYGGSGQPGEAEKVLEDLKETGLNLNTLPYSSVIDAYLKNGDYNVAIQKLKDME 1166
Query: 539 MKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE 646
+ D + + SL R SEA LLN + +
Sbjct: 1167 KEGLEPDHRIWTCFIRAASLCQRTSEAFTLLNALSD 1202
Score = 69.7 bits (169), Expect = 1e-09
Identities = 34/125 (27%), Positives = 63/125 (50%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY L+ + + + EA V +M+ +P + TY+A+I + + G
Sbjct: 326 EVRRSGLRPDIITYNTLLSGCSRESNLEEATKVFEDMVRHHCQPDLWTYNAMISVFGRCG 385
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
+ A++ F + G PD + Y+ +L R N +K + +DMV G+ D Y
Sbjct: 386 MPSKADKLFKELESRGFLPDAVTYNSLLYAFARDGNVEKVKEICEDMVQKGFGKDEMTYN 445
Query: 377 ALIRL 391
+I +
Sbjct: 446 TMIHM 450
Score = 68.6 bits (166), Expect = 3e-09
Identities = 37/125 (29%), Positives = 64/125 (51%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+KE++S G PDAVTY L+ + + + + ++ +M+ G TY+ +I Y K
Sbjct: 394 FKELESRGFLPDAVTYNSLLYAFARDGNVEKVKEICEDMVQKGFGKDEMTYNTMIHMYGK 453
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
GQ LA + + M +G PD + Y+V++D ++ ++ + M+ G P L
Sbjct: 454 QGQHDLAFQLYRDMKTAGRTPDAITYTVLIDSLGKANKITEAANVMSGMLDAGVKPTLRT 513
Query: 371 YEALI 385
Y ALI
Sbjct: 514 YSALI 518
Score = 60.8 bits (146), Expect = 7e-07
Identities = 33/130 (25%), Positives = 63/130 (48%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+++M PD TY +I G+ ++A + E+ + G P TY++L+ +A+
Sbjct: 359 FEDMVRHHCQPDLWTYNAMISVFGRCGMPSKADKLFKELESRGFLPDAVTYNSLLYAFAR 418
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G +E + M++ G D++ Y+ M+ ++ + + LY+DM + G PD
Sbjct: 419 DGNVEKVKEICEDMVQKGFGKDEMTYNTMIHMYGKQGQHDLAFQLYRDMKTAGRTPDAIT 478
Query: 371 YEALIRLLAE 400
Y LI L +
Sbjct: 479 YTVLIDSLGK 488
Score = 58.2 bits (139), Expect = 4e-06
Identities = 51/287 (17%), Positives = 120/287 (41%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+ ++ LGKAN++ A ++ + + T++ Y+A++ A+AG+ E
Sbjct: 228 PNPRMLATILAVLGKANQVGLAIEIFTRA-EPDIGNTVQVYNAMMGIQARAGRFDKVHEL 286
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M G +PD ++++ +++ ++S ++ L ++ G PD+ Y L+
Sbjct: 287 LDLMRERGCEPDLVSFNTLINARLKSGAMAPNLAIELLDEVRRSGLRPDIITYNTLLSGC 346
Query: 395 AEDSN----ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN + + +V + ++ + G A + K + D
Sbjct: 347 SRESNLEEATKVFEDMVRHHCQPDLWTYNAMISVFGRCGMPSKADKLFKELESRGFLPDA 406
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + + G +++ ++ +Y Q + A Y +
Sbjct: 407 VTYNSLLYAFARDGNVEKVKEICEDMVQKGFGKDEMTYNTMIHMYGKQGQHDLAFQLY-R 465
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
+ + LI S + + EA+ + S M G++P+ +
Sbjct: 466 DMKTAGRTPDAITYTVLIDSLGKANKITEAANVMSGMLDAGVKPTLR 512
>ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1496
Score = 318 bits (814), Expect = 2e-84
Identities = 159/291 (54%), Positives = 211/291 (72%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++M+ GR PDAVTYTVLIDSLGK NK+ EAA+VMSEML++GV+PT+RTYSAL+CGY
Sbjct: 462 QVYQDMKMLGRIPDAVTYTVLIDSLGKENKITEAANVMSEMLDSGVKPTLRTYSALMCGY 521
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG++ A+ETFDCM+RSGI+PD LAYSV+LD+ +RS TKK++ LYQ+M+ DG++PD
Sbjct: 522 AKAGKQVEAQETFDCMIRSGIRPDHLAYSVLLDIFLRSNETKKAMTLYQEMLHDGFMPDN 581
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
A+YE ++R+L ++ +++V+ IS+IL K C D AA+ L+LA
Sbjct: 582 ALYEVMLRVLGSENKLETIERVIRDMEKVGGMNAQVISSILVKGECYDHAAKMLRLAITS 641
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+D+ +L SIL+SYS GRH EA ELL F+KE+AP S QLI EA+VVI C A + + A
Sbjct: 642 GYELDRESLFSILSSYSSCGRHLEACELLAFLKEHAPSSNQLITEAMVVIQCKAGEFDGA 701
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
L EY+ + F S M+E LI C +NE F EASQ+YSDM+ YGIEPS
Sbjct: 702 LAEYSNSKGFHSFSRSCTMYEILIQGCEKNELFSEASQVYSDMRFYGIEPS 752
Score = 79.3 bits (194), Expect = 2e-12
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 9/292 (3%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY LI + + + EA V ++M +P + TY+A+I Y + G
Sbjct: 326 EVRRSGLRPDIITYNTLISGCARESNLDEAVKVYADMEAHNCQPDLWTYNAMISVYGRCG 385
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
Q + AE+ F + G PD + Y+ +L R N +K + +DMV G+ D Y
Sbjct: 386 QSSKAEQLFKELESKGFFPDAVTYNSLLYAFARELNIEKVRDICEDMVKMGFAKDEMTYN 445
Query: 377 ALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKL---AAMKN 547
+I + + ++V RI +T D ++ K+ A + +
Sbjct: 446 TIIHMYGKQGQHDQAQQV-----YQDMKMLGRIPDAVTYTVLIDSLGKENKITEAANVMS 500
Query: 548 SRVDQG------NLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNAR 709
+D G +++ Y+ +G+ EA E + + + + L L+ I+ +
Sbjct: 501 EMLDSGVKPTLRTYSALMCGYAKAGKQVEAQETFDCMIRSGIRPDHLAYSVLLDIFLRSN 560
Query: 710 QLEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYG 865
+ + A+ Y + F A++E ++ + ++ DM+ G
Sbjct: 561 ETKKAMTLYQEMLH-DGFMPDNALYEVMLRVLGSENKLETIERVIRDMEKVG 611
Score = 70.5 bits (171), Expect = 8e-10
Identities = 37/127 (29%), Positives = 64/127 (50%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q +KE++S G PDAVTY L+ + + + + D+ +M+ G TY+ +I Y
Sbjct: 392 QLFKELESKGFFPDAVTYNSLLYAFARELNIEKVRDICEDMVKMGFAKDEMTYNTIIHMY 451
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K GQ A++ + M G PD + Y+V++D + ++ + +M+ G P L
Sbjct: 452 GKQGQHDQAQQVYQDMKMLGRIPDAVTYTVLIDSLGKENKITEAANVMSEMLDSGVKPTL 511
Query: 365 AMYEALI 385
Y AL+
Sbjct: 512 RTYSALM 518
Score = 67.0 bits (162), Expect = 9e-09
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD V+ LI++ ++ M A ++++E+ +G+RP I TY+ LI G A+
Sbjct: 290 MRERGCEPDLVSLNTLINARLRSGPMVPNLAIELLNEVRRSGLRPDIITYNTLISGCARE 349
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + + M +PD Y+ M+ V+ R + K+ L++++ S G+ PD Y
Sbjct: 350 SNLDEAVKVYADMEAHNCQPDLWTYNAMISVYGRCGQSSKAEQLFKELESKGFFPDAVTY 409
Query: 374 EALIRLLAEDSN 409
+L+ A + N
Sbjct: 410 NSLLYAFARELN 421
Score = 62.4 bits (150), Expect = 2e-07
Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 5/217 (2%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y+ ++ A PD TY LI + + E +M EM G+ P + TY +LI + K
Sbjct: 987 YQRIKEAELQPDEDTYNTLIIMYCRDRRPEEGLSLMHEMRRQGLEPKLNTYKSLISAFGK 1046
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
AEE F+ + SG K D+ Y M+ ++ S N K+ +L M G P+ A
Sbjct: 1047 QQLLDQAEELFEELRSSGCKLDRSFYHTMMKLYRNSGNHAKAEMLLSVMKEAGIEPNFAT 1106
Query: 371 YEALIRLLAEDSNERCLKKV-----VXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLA 535
L+ +KV V I A L N +KL
Sbjct: 1107 MHLLMVSYGSSGQPEEAEKVLDNLKVTDSYLGTLPYSSVIDAYLRNGDYNT-GIQKLNEM 1165
Query: 536 AMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE 646
D + + SLS + SE LLN +++
Sbjct: 1166 KRDGPEPDHRIWTCFIRAASLSQQTSEVFVLLNALRD 1202
Score = 58.2 bits (139), Expect = 4e-06
Identities = 65/298 (21%), Positives = 120/298 (40%), Gaps = 7/298 (2%)
Frame = +2
Query: 14 KEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKA 193
+E+Q G + +++++ +A + E + M G PT+ ++ +I +K
Sbjct: 883 QELQDMGFKISKSSILLMLEAFARAGNIFEVKKIYHGMKAAGYFPTMNSFRIMIKLLSKR 942
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
Q E M +G KPD ++ ML ++ ++ KK+V +YQ + PD Y
Sbjct: 943 KQVRDVEAMVSEMEEAGFKPDLSIWNCMLKLYAGVEDYKKTVNVYQRIKEAELQPDEDTY 1002
Query: 374 EALIRLLAEDSN-ERCLKKVVXXXXXXXXXXXXRISAILTKAGCN---DFAAEKLKLAAM 541
LI + D E L + ++++ G D A E +
Sbjct: 1003 NTLIIMYCRDRRPEEGLSLMHEMRRQGLEPKLNTYKSLISAFGKQQLLDQAEELFEELRS 1062
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEA 721
++D+ +++ Y SG H++A LL+ +KE L+V Y ++ Q E
Sbjct: 1063 SGCKLDRSFYHTMMKLYRNSGNHAKAEMLLSVMKEAGIEPNFATMHLLMVSYGSSGQPEE 1122
Query: 722 A---LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
A LD +S T + +I + N + Q ++MK G EP ++
Sbjct: 1123 AEKVLDNLKVTDSYL----GTLPYSSVIDAYLRNGDYNTGIQKLNEMKRDGPEPDHRI 1176
Score = 57.4 bits (137), Expect = 7e-06
Identities = 55/287 (19%), Positives = 122/287 (42%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A A ++ + + T++ Y+A++ YA+ G+ +E
Sbjct: 228 PNARMLATILAVLGKANQEALAVEIYTRA-EPEIGNTVQVYNAMMGVYARNGRFKRVQEL 286
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
+ M G +PD ++ + +++ +RS ++ L ++ G PD+ Y LI
Sbjct: 287 LNLMRERGCEPDLVSLNTLINARLRSGPMVPNLAIELLNEVRRSGLRPDIITYNTLISGC 346
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILT---KAGCNDFAAEKLKLAAMKNSRVDQ 562
A +SN + +K +A+++ + G + A + K K D
Sbjct: 347 ARESNLDEAVKVYADMEAHNCQPDLWTYNAMISVYGRCGQSSKAEQLFKELESKGFFPDA 406
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ + ++ + + +++ ++ +Y Q + A Y
Sbjct: 407 VTYNSLLYAFARELNIEKVRDICEDMVKMGFAKDEMTYNTIIHMYGKQGQHDQAQQVYQD 466
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
L + + LI S + + EA+ + S+M G++P+ +
Sbjct: 467 MKMLGRIPDAVT-YTVLIDSLGKENKITEAANVMSEMLDSGVKPTLR 512
>ref|XP_007206704.1| hypothetical protein PRUPE_ppa023974mg [Prunus persica]
gi|462402346|gb|EMJ07903.1| hypothetical protein
PRUPE_ppa023974mg [Prunus persica]
Length = 1353
Score = 317 bits (812), Expect = 4e-84
Identities = 159/292 (54%), Positives = 213/292 (72%)
Frame = +2
Query: 2 FQSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICG 181
FQ Y++M+ GR PDAVTYTVLIDSLGKANK+ EAA+VMSEML++GV+PT+RTYSAL+C
Sbjct: 311 FQLYRDMKMLGRTPDAVTYTVLIDSLGKANKITEAANVMSEMLDSGVKPTLRTYSALMCA 370
Query: 182 YAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPD 361
YAKAG++ A+ETFDCM++SGI+PD LAYSV+LD+ ++ TKK++ LYQ+M+ DG+ D
Sbjct: 371 YAKAGKQVEAQETFDCMVKSGIRPDHLAYSVILDIFLKVNETKKAITLYQEMLHDGFKLD 430
Query: 362 LAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
A+Y ++R+L ++ +++V+ IS+IL K C D AA+ L+LA
Sbjct: 431 HALYGFMLRVLGRENKLEVIERVIRDMEKVGGMNPQVISSILVKGECYDHAAKMLRLAIT 490
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEA 721
+D+ +LLSI++SYS GRHSEA ELL F++E+APGS QLI EALVVI C A + +A
Sbjct: 491 SGYELDRESLLSIVSSYSSCGRHSEACELLEFLREHAPGSNQLITEALVVIQCKAHRFDA 550
Query: 722 ALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
AL EY+ F S+ M+E LI C ENE F EASQ+YSDM+LYG+EPS
Sbjct: 551 ALVEYSNTRGFHSFSRSSTMYEILIQGCEENELFGEASQVYSDMRLYGVEPS 602
Score = 68.9 bits (167), Expect = 2e-09
Identities = 59/295 (20%), Positives = 127/295 (43%), Gaps = 9/295 (3%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY LI + + + EA V ++M +P + TY+A+I Y + G
Sbjct: 176 EVRRSGLRPDIITYNTLISGCSRESNLEEAVKVYNDMEAHNCQPDLWTYNAMISVYGRCG 235
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
+ + AE F + G PD + Y+ +L R + +K + +DM+ G+ D Y
Sbjct: 236 ESSEAERLFKELESKGFFPDAVTYNSLLYAFARELDIEKVRDIGEDMMKMGFGKDEMTYN 295
Query: 377 ALIRLLA-EDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAA-MKNS 550
+I + + ++ + + ++ G A K+ AA + +
Sbjct: 296 TIIHMYGKQGQHDLAFQLYRDMKMLGRTPDAVTYTVLIDSLG----KANKITEAANVMSE 351
Query: 551 RVDQG------NLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQ 712
+D G +++ +Y+ +G+ EA E + + ++ + L ++ I+ +
Sbjct: 352 MLDSGVKPTLRTYSALMCAYAKAGKQVEAQETFDCMVKSGIRPDHLAYSVILDIFLKVNE 411
Query: 713 LEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDM-KLYGIEP 874
+ A+ Y + FK A++ +++ + ++ DM K+ G+ P
Sbjct: 412 TKKAITLYQEMLH-DGFKLDHALYGFMLRVLGRENKLEVIERVIRDMEKVGGMNP 465
Score = 68.6 bits (166), Expect = 3e-09
Identities = 37/125 (29%), Positives = 64/125 (51%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+KE++S G PDAVTY L+ + + + + D+ +M+ G TY+ +I Y K
Sbjct: 244 FKELESKGFFPDAVTYNSLLYAFARELDIEKVRDIGEDMMKMGFGKDEMTYNTIIHMYGK 303
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
GQ LA + + M G PD + Y+V++D ++ ++ + +M+ G P L
Sbjct: 304 QGQHDLAFQLYRDMKMLGRTPDAVTYTVLIDSLGKANKITEAANVMSEMLDSGVKPTLRT 363
Query: 371 YEALI 385
Y AL+
Sbjct: 364 YSALM 368
Score = 67.0 bits (162), Expect = 9e-09
Identities = 62/287 (21%), Positives = 124/287 (43%), Gaps = 2/287 (0%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD V+ LI++ ++ M A D+++E+ +G+RP I TY+ LI G ++
Sbjct: 140 MRERGCEPDLVSLNTLINARLRSGAMVPNLAIDLLNEVRRSGLRPDIITYNTLISGCSRE 199
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + ++ M +PD Y+ M+ V+ R + ++ L++++ S G+ PD Y
Sbjct: 200 SNLEEAVKVYNDMEAHNCQPDLWTYNAMISVYGRCGESSEAERLFKELESKGFFPDAVTY 259
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+L+ A + + ++KV D + +K+ K
Sbjct: 260 NSLLYAFARELD---IEKV------------------------RDIGEDMMKMGFGK--- 289
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +I+ Y G+H A +L +K + + L+ A ++ A +
Sbjct: 290 -DEMTYNTIIHMYGKQGQHDLAFQLYRDMKMLGRTPDAVTYTVLIDSLGKANKITEAANV 348
Query: 734 YNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
++ + K + + L+ + A+ + VEA + + M GI P
Sbjct: 349 MSEMLDSGV-KPTLRTYSALMCAYAKAGKQVEAQETFDCMVKSGIRP 394
Score = 65.1 bits (157), Expect = 4e-08
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 4/216 (1%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y+++Q A PD TY LI + + E +M EM G+ P + TY +LI + K
Sbjct: 837 YQQIQEAVLQPDDDTYNTLIIMYCRDCRPEEGLSLMQEMRRQGLEPKLDTYKSLISAFGK 896
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
AEE F+ + +G K D+ Y M+ + S N K+ +L+ M G P+ A
Sbjct: 897 QKLLDQAEELFEELRSNGCKLDRSFYHTMMKMFRNSGNHAKAEMLFTMMKEAGIEPNFAT 956
Query: 371 YEALIRLLAEDSN----ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAA 538
L+ E+ L + + K G + +KL
Sbjct: 957 MHLLMVSYGSSGQPQEAEKVLDNLKVTGLDLDTLPYSSVIGAYLKNGDYNIGIQKLNEMK 1016
Query: 539 MKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE 646
D + + SLS SEAI LLN +++
Sbjct: 1017 EVGLEPDHRIWTCFIRAASLSQHKSEAIILLNALRD 1052
Score = 59.3 bits (142), Expect = 2e-06
Identities = 32/130 (24%), Positives = 62/130 (47%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y +M++ PD TY +I G+ + +EA + E+ + G P TY++L+ +A+
Sbjct: 209 YNDMEAHNCQPDLWTYNAMISVYGRCGESSEAERLFKELESKGFFPDAVTYNSLLYAFAR 268
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
+ + M++ G D++ Y+ ++ ++ + + LY+DM G PD
Sbjct: 269 ELDIEKVRDIGEDMMKMGFGKDEMTYNTIIHMYGKQGQHDLAFQLYRDMKMLGRTPDAVT 328
Query: 371 YEALIRLLAE 400
Y LI L +
Sbjct: 329 YTVLIDSLGK 338
>ref|XP_002309826.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550333963|gb|EEE90276.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1484
Score = 316 bits (809), Expect = 9e-84
Identities = 164/291 (56%), Positives = 213/291 (73%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++MQS+GR+PDAVTYTVLIDSLGK NK+AEAA VMSEMLNTGV+PT++TYSALICGY
Sbjct: 456 QLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGY 515
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG+ AEETFDCMLRSGI+PD LAYSVMLD+H+R K+++ LY++M+ DG D
Sbjct: 516 AKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDH 575
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
++YE ++R L + + + +V+ IS+IL K C D AA+ L+ A
Sbjct: 576 SLYELMLRTLRKVNKVEDIGRVIRDMEEICGMNTQTISSILVKGECYDEAAKMLRRAISD 635
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+ +D+ NLLSIL+SYS SGRH+EA++LL F+KE++P S Q+I EALVV+ C A+QL+AA
Sbjct: 636 HFEIDRENLLSILSSYSSSGRHAEALDLLEFLKEHSPRSSQMITEALVVMLCKAQQLDAA 695
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
L EY+ N L F GS MFE LI C ENE EASQ++SDM+ GI+ S
Sbjct: 696 LKEYSNNREL-GFTGSFTMFESLIQCCLENELITEASQVFSDMRFCGIKAS 745
Score = 77.8 bits (190), Expect = 5e-12
Identities = 61/287 (21%), Positives = 128/287 (44%), Gaps = 7/287 (2%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY LI + +A+ + EAA V +M +P + TY+A+I Y + G
Sbjct: 320 EVRRSGLRPDTITYNTLISACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCG 379
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
AE+ F+ + G PD ++Y+ +L R N +K ++++MV G+ D Y
Sbjct: 380 LSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYN 439
Query: 377 ALIRLLA-EDSNERCLKKVVXXXXXXXXXXXXRISAILTKAG-CNDFAAEKLKLAAMKNS 550
+I + + NE L+ + ++ G N A ++ M N+
Sbjct: 440 TMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNT 499
Query: 551 RVDQ--GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
V +++ Y+ +G+ EA E + + + + L ++ I+ + + A
Sbjct: 500 GVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRA 559
Query: 725 LDEYNKNNSLCMFKGST---AMFEYLIVSCAENERFVEASQIYSDMK 856
+ Y + + G T +++E ++ + + + + ++ DM+
Sbjct: 560 MTLYKE----MLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRDME 602
Score = 72.4 bits (176), Expect = 2e-10
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD V++ LI++ KA M A ++++E+ +G+RP TY+ LI ++A
Sbjct: 284 MRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRA 343
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + FD M +PD Y+ M+ V+ R + K+ L+ D+ S G+ PD Y
Sbjct: 344 SNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSY 403
Query: 374 EALIRLLAEDSNERCLKKV 430
+L+ A + N +K++
Sbjct: 404 NSLLYAFAREGNVEKVKEI 422
Score = 70.9 bits (172), Expect = 6e-10
Identities = 37/127 (29%), Positives = 66/127 (51%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q + +++S G PDAV+Y L+ + + + + ++ EM+ G TY+ +I Y
Sbjct: 386 QLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMY 445
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K GQ LA + + M SG PD + Y+V++D ++ ++ + +M++ G P L
Sbjct: 446 GKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTL 505
Query: 365 AMYEALI 385
Y ALI
Sbjct: 506 KTYSALI 512
Score = 65.1 bits (157), Expect = 4e-08
Identities = 53/218 (24%), Positives = 88/218 (40%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+ ++ G PD TY LI + ++ E +M EM G+ P + TY +L+ +
Sbjct: 978 QVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASF 1037
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AEE F+ + G K D+ Y M+ ++ S + K+ L+ M G P +
Sbjct: 1038 GKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTI 1097
Query: 365 AMYEALIRLLAEDSN----ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKL 532
A L+ E+ L + + + G + +KL
Sbjct: 1098 ATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQ 1157
Query: 533 AAMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE 646
+ D + + SLS R SEAI LLN +++
Sbjct: 1158 MKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQD 1195
Score = 64.7 bits (156), Expect = 5e-08
Identities = 62/287 (21%), Positives = 122/287 (42%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A + ++ LGKAN+ A A +V T++ Y+A++ YA+ G+ +E
Sbjct: 222 PNARMLSTILSVLGKANQEALAVEVFMRA-EPSAGNTVQVYNAMMGVYARRGRFNKVQEL 280
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVR--SKNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M G KPD ++++ +++ ++ + ++ L ++ G PD Y LI
Sbjct: 281 LDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISAC 340
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR---VDQ 562
+ SN E K +A+++ G + + +L SR D
Sbjct: 341 SRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDA 400
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
+ S+L +++ G + E+ + + G +++ ++ +Y Q E AL Y
Sbjct: 401 VSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRD 460
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
S + LI S + + EA+ + S+M G++P+ K
Sbjct: 461 MQSSGR-NPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLK 506
Score = 62.4 bits (150), Expect = 2e-07
Identities = 65/297 (21%), Positives = 122/297 (41%), Gaps = 6/297 (2%)
Frame = +2
Query: 14 KEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKA 193
+E+Q G + +++D+ +A + E + M G PT+ Y + ++
Sbjct: 876 QELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRG 935
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
Q E M +G KPD ++ +L ++V ++ +K++ +YQ + DG PD Y
Sbjct: 936 KQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTY 995
Query: 374 EALIRLLAEDSNER----CLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
LI + D + ++ + A K + A E +
Sbjct: 996 NTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQS 1055
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIA--EALVVIYCNARQL 715
K ++D+ +++ Y SG HS+A L + +K+ G E IA L+V Y ++ Q
Sbjct: 1056 KGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKD--AGVEPTIATMHLLMVSYGSSGQP 1113
Query: 716 EAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
+ A ++ N ST + +I + N + Q MK G+EP ++
Sbjct: 1114 QEA-EKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRI 1169
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 316 bits (809), Expect = 9e-84
Identities = 164/292 (56%), Positives = 208/292 (71%)
Frame = +2
Query: 2 FQSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICG 181
FQ Y +M+ +GR PDAVTYTVLIDSLGKAN + EAA+VMSEMLN V+PT+RT+SALICG
Sbjct: 451 FQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICG 510
Query: 182 YAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPD 361
YAKAG+R AEETFDCMLRSGIKPD LAYSVMLD+ +R + K++ LYQ+MV + PD
Sbjct: 511 YAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPD 570
Query: 362 LAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
A+YE ++R+L +++ E + KVV I +IL K C D AA L+LA
Sbjct: 571 HALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAIS 630
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEA 721
+ +D+ NLLSIL SY SGRH EA ELL+F++E++ GS QLI EAL+++ C A QL
Sbjct: 631 QGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGD 690
Query: 722 ALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
AL EY K +F GS M+E L++ C ENE F EASQI+SDM+ YG+EPS
Sbjct: 691 ALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPS 742
Score = 78.2 bits (191), Expect = 4e-12
Identities = 65/287 (22%), Positives = 131/287 (45%), Gaps = 2/287 (0%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+S G PD V++ LI++ K+ M A ++++E+ +G++P I TY+ LI ++
Sbjct: 280 MRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRE 339
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + ++ M+ +PD Y+ M+ V+ R ++++ L++D+ S G++PD Y
Sbjct: 340 SNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTY 399
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+L+ A + N +K++ C D +K+ K
Sbjct: 400 NSLLYAFAREGNVDKVKEI-----------------------CEDM----VKMGFGK--- 429
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +I+ Y G+H A +L + +K + + + L+ A ++ A +
Sbjct: 430 -DEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEV 488
Query: 734 YNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
++ + + K + F LI A+ + VEA + + M GI+P
Sbjct: 489 MSEMLNAXV-KPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKP 534
Score = 72.0 bits (175), Expect = 3e-10
Identities = 59/284 (20%), Positives = 114/284 (40%), Gaps = 4/284 (1%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY LI + + + + EA V ++M+ +P + TY+A+I Y + G
Sbjct: 316 EVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCG 375
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
A F + G PD + Y+ +L R N K + +DMV G+ D Y
Sbjct: 376 MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYN 435
Query: 377 ALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILT----KAGCNDFAAEKLKLAAMK 544
+I + + ++ +L KA AAE +
Sbjct: 436 TIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNA 495
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+ +++ Y+ +G+ EA E + + + + L ++ I + A
Sbjct: 496 XVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKA 555
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMK 856
+ Y + L FK A++E ++ + R + ++ DM+
Sbjct: 556 MKLY-QEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDME 598
Score = 68.2 bits (165), Expect = 4e-09
Identities = 58/287 (20%), Positives = 124/287 (43%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A A ++ + T++ Y+A++ YA+ G+ +E
Sbjct: 218 PNARMLATILSVLGKANQEALAVEIFARA-EAAXGNTVQVYNAMMGVYARTGRFTKVQEL 276
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRSKN--TKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M G +PD ++++ +++ ++S T ++ L ++ G PD+ Y LI
Sbjct: 277 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 336
Query: 395 AEDSN-ERCLK---KVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E +K +V + ++ + G + A K K D
Sbjct: 337 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDA 396
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + + G +++ ++ +Y Q + A Y+
Sbjct: 397 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYS- 455
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
+ L + LI S + EA+++ S+M ++P+ +
Sbjct: 456 DMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLR 502
Score = 68.2 bits (165), Expect = 4e-09
Identities = 36/125 (28%), Positives = 66/125 (52%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+K+++S G PDAVTY L+ + + + + ++ +M+ G TY+ +I Y K
Sbjct: 384 FKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGK 443
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
GQ LA + + M SG PD + Y+V++D ++ K++ + +M++ P L
Sbjct: 444 RGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRT 503
Query: 371 YEALI 385
+ ALI
Sbjct: 504 FSALI 508
Score = 66.2 bits (160), Expect = 2e-08
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+ +Q AG PD TY LI + + E +M EM G+ P + TY +LI +
Sbjct: 975 QVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAF 1034
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AEE F+ +L K D+ Y +M+ + S N K+ L M G P +
Sbjct: 1035 GKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTI 1094
Query: 365 AMYEALIRLLA----EDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKL 532
A L+ + + E+ L + + K G ++ A +KL
Sbjct: 1095 ATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLME 1154
Query: 533 AAMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE 646
D + + SLS SEAI LL +++
Sbjct: 1155 MKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRD 1192
Score = 65.9 bits (159), Expect = 2e-08
Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 2/294 (0%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y+ M++AG P Y ++I L K ++ + ++SEM +P + +++++ Y
Sbjct: 907 YQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTG 966
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G + + + +G+KPD+ Y+ ++ ++ R + ++ + L +M G P L
Sbjct: 967 IGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDT 1026
Query: 371 YEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNS 550
Y++LI + K + A E + K
Sbjct: 1027 YKSLI-------------------------------SAFGKLQMVEQAEELFEGLLSKEC 1055
Query: 551 RVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIA--EALVVIYCNARQLEAA 724
++D+ ++ + SG HS+A +LL +KE G E IA L+V Y + Q E A
Sbjct: 1056 KLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKE--AGVEPTIATMHLLMVSYSGSGQPEEA 1113
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
++ N + ST + +I + +N A Q +MK G+EP ++
Sbjct: 1114 -EKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRI 1166
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 315 bits (808), Expect = 1e-83
Identities = 164/292 (56%), Positives = 208/292 (71%)
Frame = +2
Query: 2 FQSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICG 181
FQ Y +M+ +GR PDAVTYTVLIDSLGKAN + EAA+VMSEMLN V+PT+RT+SALICG
Sbjct: 419 FQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICG 478
Query: 182 YAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPD 361
YAKAG+R AEETFDCMLRSGIKPD LAYSVMLD+ +R + K++ LYQ+MV + PD
Sbjct: 479 YAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPD 538
Query: 362 LAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
A+YE ++R+L +++ E + KVV I +IL K C D AA L+LA
Sbjct: 539 HALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKGECFDHAANMLRLAIS 598
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEA 721
+ +D+ NLLSIL SY SGRH EA ELL+F++E++ GS QLI EAL+++ C A QL
Sbjct: 599 QGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAHQLGD 658
Query: 722 ALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
AL EY K +F GS M+E L++ C ENE F EASQI+SDM+ YG+EPS
Sbjct: 659 ALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPS 710
Score = 77.8 bits (190), Expect = 5e-12
Identities = 65/287 (22%), Positives = 130/287 (45%), Gaps = 2/287 (0%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+S G PD V++ LI++ K+ M A ++++E+ +G++P I TY+ LI ++
Sbjct: 248 MRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRE 307
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + ++ M+ +PD Y+ M+ V+ R ++++ L++D+ S G++PD Y
Sbjct: 308 SNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTY 367
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+L+ A + N +K++ C D +K+ K
Sbjct: 368 NSLLYAFAREGNVDKVKEI-----------------------CEDM----VKMGFGK--- 397
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +I+ Y G+H A +L + +K + + + L+ A ++ A +
Sbjct: 398 -DEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEV 456
Query: 734 YNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
++ + K + F LI A+ + VEA + + M GI+P
Sbjct: 457 MSEMLN-ARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKP 502
Score = 74.3 bits (181), Expect = 6e-11
Identities = 59/284 (20%), Positives = 120/284 (42%), Gaps = 4/284 (1%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY LI + + + + EA V ++M+ +P + TY+A+I Y + G
Sbjct: 284 EVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCG 343
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
A F + G PD + Y+ +L R N K + +DMV G+ D Y
Sbjct: 344 MSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYN 403
Query: 377 ALIRLLAE-DSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLK-LAAMKNS 550
+I + + ++ + + ++ G + E + ++ M N+
Sbjct: 404 TIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNA 463
Query: 551 RVDQ--GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
RV +++ Y+ +G+ EA E + + + + L ++ I + A
Sbjct: 464 RVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKA 523
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMK 856
+ Y + L FK A++E ++ + R + ++ DM+
Sbjct: 524 MKLY-QEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDME 566
Score = 67.8 bits (164), Expect = 5e-09
Identities = 36/125 (28%), Positives = 66/125 (52%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+K+++S G PDAVTY L+ + + + + ++ +M+ G TY+ +I Y K
Sbjct: 352 FKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGK 411
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
GQ LA + + M SG PD + Y+V++D ++ K++ + +M++ P L
Sbjct: 412 RGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRT 471
Query: 371 YEALI 385
+ ALI
Sbjct: 472 FSALI 476
Score = 67.4 bits (163), Expect = 7e-09
Identities = 58/287 (20%), Positives = 124/287 (43%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A A ++ + T++ Y+A++ YA+ G+ +E
Sbjct: 186 PNARMLATILSVLGKANQEALAVEIFARA-EAASGNTVQVYNAMMGVYARTGRFTKVQEL 244
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRSKN--TKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M G +PD ++++ +++ ++S T ++ L ++ G PD+ Y LI
Sbjct: 245 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 304
Query: 395 AEDSN-ERCLK---KVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E +K +V + ++ + G + A K K D
Sbjct: 305 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDA 364
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + + G +++ ++ +Y Q + A Y+
Sbjct: 365 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYS- 423
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
+ L + LI S + EA+++ S+M ++P+ +
Sbjct: 424 DMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLR 470
Score = 66.2 bits (160), Expect = 2e-08
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+ +Q AG PD TY LI + + E +M EM G+ P + TY +LI +
Sbjct: 943 QVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAF 1002
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AEE F+ +L K D+ Y +M+ + S N K+ L M G P +
Sbjct: 1003 GKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTI 1062
Query: 365 AMYEALIRLLA----EDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKL 532
A L+ + + E+ L + + K G ++ A +KL
Sbjct: 1063 ATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLME 1122
Query: 533 AAMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE 646
D + + SLS SEAI LL +++
Sbjct: 1123 MKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRD 1160
Score = 65.5 bits (158), Expect = 3e-08
Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 2/294 (0%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y+ M++AG P Y ++I L K ++ + ++SEM +P + +++++ Y
Sbjct: 875 YQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTG 934
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G + + + +G+KPD+ Y+ ++ ++ R + ++ + L +M G P L
Sbjct: 935 IGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDT 994
Query: 371 YEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNS 550
Y++LI + K + A E + K
Sbjct: 995 YKSLI-------------------------------SAFGKLQMVEQAEELFEGLLSKEC 1023
Query: 551 RVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIA--EALVVIYCNARQLEAA 724
++D+ ++ + SG HS+A +LL +KE G E IA L+V Y + Q E A
Sbjct: 1024 KLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKE--AGVEPTIATMHLLMVSYSGSGQPEEA 1081
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
++ N + ST + +I + +N A Q +MK G+EP ++
Sbjct: 1082 -EKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRI 1134
>gb|EPS68102.1| hypothetical protein M569_06665 [Genlisea aurea]
Length = 1418
Score = 314 bits (805), Expect = 3e-83
Identities = 159/294 (54%), Positives = 216/294 (73%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y +M+S+GR+PDAVTYTVLIDSLGK NKM EAA++MSEMLN +RPT+RTYSALICGY
Sbjct: 426 QVYNDMKSSGRNPDAVTYTVLIDSLGKGNKMREAANLMSEMLNNDIRPTLRTYSALICGY 485
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAGQ AEE F+CM+R+GI+PD +YSVMLDVH+ S ++++LYQ MV DG+VPDL
Sbjct: 486 AKAGQPVEAEEIFNCMIRAGIRPDNFSYSVMLDVHICSNKVNEAMLLYQKMVKDGFVPDL 545
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
+ E L+R+L E ++E + +V+ I IL ++G +DFA++ LK M+
Sbjct: 546 GLSEKLLRMLGEANSEHHVLEVIEHLKELHGLSAETIPVILARSGLHDFASKALKQNVMQ 605
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+ D+ NL+SI+ASYS +G HSE+IELL+F++ + GS Q IAEALVV+YC Q++AA
Sbjct: 606 SLSFDRENLISIVASYSQAGNHSESIELLDFIQNHVSGSRQYIAEALVVLYCKTLQIDAA 665
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
L+EY +N L + +A++E LI+ C NERF EA QI+SDM+ G+EPSA+V
Sbjct: 666 LEEYCRN--LHFSRCCSAVYESLIIICLRNERFSEACQIFSDMQFRGVEPSAEV 717
Score = 75.5 bits (184), Expect = 3e-11
Identities = 40/125 (32%), Positives = 66/125 (52%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+ E+ S G PDAVTY L+++ K N + D+ EM+ G TY+ +I Y K
Sbjct: 358 FLELGSKGFSPDAVTYNSLVNAFAKGNNEMKVNDICQEMVEMGFAKDEMTYNTIISMYGK 417
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G+ LA + ++ M SG PD + Y+V++D + +++ L +M+++ P L
Sbjct: 418 QGKLDLALQVYNDMKSSGRNPDAVTYTVLIDSLGKGNKMREAANLMSEMLNNDIRPTLRT 477
Query: 371 YEALI 385
Y ALI
Sbjct: 478 YSALI 482
Score = 69.3 bits (168), Expect = 2e-09
Identities = 60/289 (20%), Positives = 125/289 (43%), Gaps = 4/289 (1%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD V++ LI++ ++ M +++SE+ + +RP + TY+ ++ G A+
Sbjct: 254 MRGKGCQPDLVSFNTLINARLRSGPMTPDLGIELLSEVRRSKIRPDVITYNTILSGCARD 313
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + F M + +PD Y+ M+ V+ R ++ + ++ S G+ PD Y
Sbjct: 314 SNLEEATKVFHDMQKHKCQPDLWTYNAMISVYGRCGLPGEAERFFLELGSKGFSPDAVTY 373
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+L+ A+ +NE + ND E +++ K
Sbjct: 374 NSLVNAFAKGNNEMKV---------------------------NDICQEMVEMGFAK--- 403
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +I++ Y G+ A+++ N +K + + + L+ ++ A +
Sbjct: 404 -DEMTYNTIISMYGKQGKLDLALQVYNDMKSSGRNPDAVTYTVLIDSLGKGNKMREAANL 462
Query: 734 YNK--NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
++ NN + + + + LI A+ + VEA +I++ M GI P
Sbjct: 463 MSEMLNNDI---RPTLRTYSALICGYAKAGQPVEAEEIFNCMIRAGIRP 508
Score = 65.9 bits (159), Expect = 2e-08
Identities = 54/246 (21%), Positives = 114/246 (46%), Gaps = 7/246 (2%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y+ M++AG P Y V++ L KA ++ + V+ EM G +P + Y++++ Y K
Sbjct: 879 YRGMKAAGYLPTMHLYKVILCLLCKAKQVKDVEAVLLEMETFGFKPDLSVYNSVLKLYTK 938
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
A + + SG+KPD+ Y+ ++ ++ R +++ + ++M G PDL
Sbjct: 939 IEDYRKAALVYRRLQESGVKPDEDTYTTLILMYCRDCRPEEAASILREMTLLGLKPDLDT 998
Query: 371 YEALI-----RLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLA 535
+++L +L+ ++ E L + + + ++ + AEKL L
Sbjct: 999 FKSLTASYGKKLMVREAEE--LFAYLKSDGRKLDRSFYHLMMKMYRSSGHHDKAEKL-LI 1055
Query: 536 AMKNSRVD--QGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNAR 709
M++S V+ + ++ SY+ SG EA ++ + +K N L +++ Y
Sbjct: 1056 TMQDSGVEPNAATMRILMTSYASSGHPVEAEKIFDNLKSNGASISTLEYSSVIDAYLKNG 1115
Query: 710 QLEAAL 727
L++ +
Sbjct: 1116 DLDSGI 1121
Score = 61.6 bits (148), Expect = 4e-07
Identities = 32/125 (25%), Positives = 59/125 (47%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ + PD +TY ++ + + + EA V +M +P + TY+A+I Y + G
Sbjct: 290 EVRRSKIRPDVITYNTILSGCARDSNLEEATKVFHDMQKHKCQPDLWTYNAMISVYGRCG 349
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
AE F + G PD + Y+ +++ + N K + Q+MV G+ D Y
Sbjct: 350 LPGEAERFFLELGSKGFSPDAVTYNSLVNAFAKGNNEMKVNDICQEMVEMGFAKDEMTYN 409
Query: 377 ALIRL 391
+I +
Sbjct: 410 TIISM 414
Score = 60.5 bits (145), Expect = 9e-07
Identities = 34/135 (25%), Positives = 59/135 (43%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+ +MQ PD TY +I G+ EA E+ + G P TY++L+ +AK
Sbjct: 323 FHDMQKHKCQPDLWTYNAMISVYGRCGLPGEAERFFLELGSKGFSPDAVTYNSLVNAFAK 382
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
+ M+ G D++ Y+ ++ ++ + ++ +Y DM S G PD
Sbjct: 383 GNNEMKVNDICQEMVEMGFAKDEMTYNTIISMYGKQGKLDLALQVYNDMKSSGRNPDAVT 442
Query: 371 YEALIRLLAEDSNER 415
Y LI L + + R
Sbjct: 443 YTVLIDSLGKGNKMR 457
>ref|XP_006428510.1| hypothetical protein CICLE_v100138542mg, partial [Citrus clementina]
gi|557530567|gb|ESR41750.1| hypothetical protein
CICLE_v100138542mg, partial [Citrus clementina]
Length = 1110
Score = 306 bits (783), Expect = 9e-81
Identities = 156/291 (53%), Positives = 209/291 (71%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++M+ +GR+PD VTYTVLIDSLGKANK++EAA+VMSEML+ V+PT+RTYSALICGY
Sbjct: 312 QLYRDMKLSGRNPDVVTYTVLIDSLGKANKISEAANVMSEMLDASVKPTLRTYSALICGY 371
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG+R AE+TF+CM RSGI+PD LAYSVMLD+ +R T K+++LYQ+MVS+G+ PD
Sbjct: 372 AKAGKRLEAEKTFECMRRSGIRPDHLAYSVMLDIFLRFNETNKAMMLYQEMVSNGFTPDQ 431
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
A+YE +I +L ++ ++KVV IS+IL K C D AAE L+LA
Sbjct: 432 ALYEIMIGVLGRENKGEEIRKVVRDMKELSGINMQEISSILVKGECYDHAAEILRLAIRN 491
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+D LLSIL+SY++SGRH EA EL+ FVK++A S + +A +++ C A++L+AA
Sbjct: 492 GIELDHEKLLSILSSYNVSGRHLEACELIEFVKQHASESTPPLTQAFIIMLCKAQKLDAA 551
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
L+EY+ F S M+E LI SC NERF EASQ++SDM+ Y IEPS
Sbjct: 552 LEEYSNAWGFGFFCKSKTMYESLIHSCEYNERFAEASQLFSDMRFYNIEPS 602
Score = 70.1 bits (170), Expect = 1e-09
Identities = 62/297 (20%), Positives = 127/297 (42%), Gaps = 6/297 (2%)
Frame = +2
Query: 2 FQSYKE----MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTY 163
FQ +E M+ G PD V++ LI++ ++ M D+++E+ +G+RP I TY
Sbjct: 130 FQKVQELLDLMRKRGCEPDLVSFNTLINARLRSGAMVPNLGVDLLNEVRRSGLRPDIITY 189
Query: 164 SALICGYAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVS 343
+ +I ++ A + + + +PD Y+ M+ V+ R +K+ L++++ S
Sbjct: 190 NTIISACSRESNLEEAMKVYGDLEAHNCQPDLWTYNAMISVYGRCGLFEKAEQLFKELES 249
Query: 344 DGYVPDLAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEK 523
G+ PD Y +L+ A + N +K++ +
Sbjct: 250 KGFFPDAVTYNSLLYAFAREGNVEKVKEI---------------------------SENM 282
Query: 524 LKLAAMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCN 703
LK+ K D+ +I+ Y G+H A++L +K + + + L+
Sbjct: 283 LKMGFGK----DEMTYNTIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYTVLIDSLGK 338
Query: 704 ARQLEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
A ++ A + ++ + K + + LI A+ + +EA + + M+ GI P
Sbjct: 339 ANKISEAANVMSEMLDASV-KPTLRTYSALICGYAKAGKRLEAEKTFECMRRSGIRP 394
Score = 67.4 bits (163), Expect = 7e-09
Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 8/288 (2%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY +I + + + + EA V ++ +P + TY+A+I Y + G
Sbjct: 176 EVRRSGLRPDIITYNTIISACSRESNLEEAMKVYGDLEAHNCQPDLWTYNAMISVYGRCG 235
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
AE+ F + G PD + Y+ +L R N +K + ++M+ G+ D Y
Sbjct: 236 LFEKAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEISENMLKMGFGKDEMTYN 295
Query: 377 ALIRLLA-EDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+I + + ++ L+ + ++ G A K+ AA S
Sbjct: 296 TIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYTVLIDSLG----KANKISEAANVMSE 351
Query: 554 VDQGNLLSILASYSL-------SGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQ 712
+ ++ L +YS +G+ EA + ++ + + L ++ I+ +
Sbjct: 352 MLDASVKPTLRTYSALICGYAKAGKRLEAEKTFECMRRSGIRPDHLAYSVMLDIFLRFNE 411
Query: 713 LEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMK 856
A+ Y + S F A++E +I + E ++ DMK
Sbjct: 412 TNKAMMLYQEMVS-NGFTPDQALYEIMIGVLGRENKGEEIRKVVRDMK 458
Score = 64.3 bits (155), Expect = 6e-08
Identities = 59/287 (20%), Positives = 124/287 (43%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A + + V T++ Y+A++ YA+ G+ +E
Sbjct: 78 PNARMLATILAVLGKANQENLAVETFMRA-ESAVDDTVQVYNAMMGIYARNGRFQKVQEL 136
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M + G +PD ++++ +++ +RS V L ++ G PD+ Y +I
Sbjct: 137 LDLMRKRGCEPDLVSFNTLINARLRSGAMVPNLGVDLLNEVRRSGLRPDIITYNTIISAC 196
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILT---KAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E +K +A+++ + G + A + K K D
Sbjct: 197 SRESNLEEAMKVYGDLEAHNCQPDLWTYNAMISVYGRCGLFEKAEQLFKELESKGFFPDA 256
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + + G +++ ++ +Y Q + AL Y +
Sbjct: 257 VTYNSLLYAFAREGNVEKVKEISENMLKMGFGKDEMTYNTIIHMYGKQGQHDVALQLY-R 315
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
+ L + LI S + + EA+ + S+M ++P+ +
Sbjct: 316 DMKLSGRNPDVVTYTVLIDSLGKANKISEAANVMSEMLDASVKPTLR 362
Score = 62.4 bits (150), Expect = 2e-07
Identities = 58/217 (26%), Positives = 88/217 (40%), Gaps = 4/217 (1%)
Frame = +2
Query: 8 SYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYA 187
S E+Q A PD T+ LI + + E +M EM G+ P + TY +LI +
Sbjct: 820 SSAEIQEADLQPDEDTFNTLIIMYCRDCRPEEGLSLMHEMRKLGLEPKLDTYKSLISAFG 879
Query: 188 KAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLA 367
K Q AEE F+ + K D+ Y M+ ++ S KS L M G P +A
Sbjct: 880 KQQQLEQAEELFEELRSKRCKLDRSFYHTMMKIYRNSGYHSKSENLLNMMKESGVEPTIA 939
Query: 368 MYEALIRLLAEDSNERCLKKVV--XXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
L+ + + +KV+ S I D A KL M
Sbjct: 940 TMHLLMVSYSSSGQPQEAEKVLSNLKGTSLNLSTLPYSSVIAAYLRNGDSAVGIQKLIEM 999
Query: 542 KNSRVDQGNLL--SILASYSLSGRHSEAIELLNFVKE 646
K ++ + + + + SLS SEAI LLN +++
Sbjct: 1000 KEEGIEPDHRIWTCFVRAASLSQCSSEAIILLNAIRD 1036
>ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Populus trichocarpa]
gi|566211778|ref|XP_006372941.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550319588|gb|ERP50737.1| hypothetical protein
POPTR_0017s06420g [Populus trichocarpa]
gi|550319589|gb|ERP50738.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 1465
Score = 305 bits (782), Expect = 1e-80
Identities = 157/291 (53%), Positives = 206/291 (70%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++M+S+GR+PD +TYTVLIDSLGK NK+ EAA +MSEMLNTGV+PT+RTYSALICGY
Sbjct: 458 QLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGY 517
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG+ AEETFDCMLRSG +PD+LAYSVMLD+H+R K+++ Y++M+ DG +P+
Sbjct: 518 AKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEH 577
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
++YE ++R L + + +VV IS IL K C D AA+ L+ A
Sbjct: 578 SLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQAISYILVKGDCYDEAAKMLRRAISD 637
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+D+ NLLSIL+SYS SGRHS A++LL +KE+ P S Q+I EALVV+ C A+QL+ A
Sbjct: 638 RYEIDRENLLSILSSYSSSGRHSVALDLLELLKEHTPRSSQMITEALVVMLCKAQQLDTA 697
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
L EY+ + L F GS MFE LI C ENE F EASQ++SDM+ GI+ S
Sbjct: 698 LKEYSNSREL-GFTGSFTMFEALIQCCLENELFTEASQVFSDMRFCGIKAS 747
Score = 75.9 bits (185), Expect = 2e-11
Identities = 61/296 (20%), Positives = 128/296 (43%), Gaps = 8/296 (2%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY LI + +A+ + EA +V +M+ P + TY+A+I Y + G
Sbjct: 322 EVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCG 381
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
AE+ F+ + G PD ++Y+ L R N +K + ++MV G+ D Y
Sbjct: 382 LSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYN 441
Query: 377 ALIRLLA-EDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+I + + N+ L+ + ++ G + E A M +
Sbjct: 442 TMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEE---AAGMMSEM 498
Query: 554 VDQG------NLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQL 715
++ G +++ Y+ +G+ EA E + + + +QL ++ I+ +
Sbjct: 499 LNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEP 558
Query: 716 EAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDM-KLYGIEPSA 880
+ A+ Y K +++E ++ + + + ++ DM ++ G+ P A
Sbjct: 559 KRAMTFY-KEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEEVCGMNPQA 613
Score = 75.1 bits (183), Expect = 3e-11
Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 2/287 (0%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD V++ LI++ KA +M A ++++E+ +G+RP I TY+ LI ++A
Sbjct: 286 MRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRA 345
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A FD M+ +PD Y+ M+ V+ R + K+ L+ D+ S G+ PD Y
Sbjct: 346 SNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSY 405
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+ + A + N +K D E +K+ K
Sbjct: 406 NSFLYAFAREGNVEKVK---------------------------DICEEMVKIGFGK--- 435
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +++ Y G++ A++L +K + + + L+ ++E A
Sbjct: 436 -DEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGM 494
Query: 734 YNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
++ + + K + + LI A+ + VEA + + M G P
Sbjct: 495 MSEMLNTGV-KPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRP 540
Score = 71.6 bits (174), Expect = 4e-10
Identities = 37/127 (29%), Positives = 66/127 (51%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q + +++S G PDAV+Y + + + + + D+ EM+ G TY+ +I Y
Sbjct: 388 QLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMY 447
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K GQ LA + + M SG PD + Y+V++D ++ +++ + +M++ G P L
Sbjct: 448 GKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTL 507
Query: 365 AMYEALI 385
Y ALI
Sbjct: 508 RTYSALI 514
Score = 69.3 bits (168), Expect = 2e-09
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+ ++ G PD TY +LI + ++ E +M EM G+ P + TY +L+ +
Sbjct: 980 QIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASF 1039
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AEE F+ + +G K D+ Y +M+ ++ S + K+ L+ M G P +
Sbjct: 1040 GKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDAGVEPTI 1099
Query: 365 AMYEALIRLLAEDSN----ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKL 532
A L+ E+ L + + + G + +KLK
Sbjct: 1100 ATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYNAGIQKLKQ 1159
Query: 533 AAMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE 646
+ D + + SLS SEAI LLN +++
Sbjct: 1160 VKEEGLEPDHRIWTCFIRAASLSQHTSEAILLLNALRD 1197
Score = 62.4 bits (150), Expect = 2e-07
Identities = 55/287 (19%), Positives = 122/287 (42%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A + ++ LGKAN+ A +V + V T++ Y+A++ YA++G+ +E
Sbjct: 224 PNARMLSTILAVLGKANQEPLAVEVFTRA-EPSVENTVKVYNAMMGVYARSGKFNKVQEL 282
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
FD M G +PD ++++ +++ +++ ++ L ++ G PD+ Y LI
Sbjct: 283 FDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISAC 342
Query: 395 AEDSN----ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSRVDQ 562
+ SN +V + ++ + G + A + + D
Sbjct: 343 SRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDA 402
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
+ S L +++ G + ++ + + G +++ ++ +Y Q + AL Y
Sbjct: 403 VSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRD 462
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
S + LI S + + EA+ + S+M G++P+ +
Sbjct: 463 MKSSGR-NPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLR 508
>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1429
Score = 305 bits (782), Expect = 1e-80
Identities = 157/291 (53%), Positives = 205/291 (70%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++M+ +GR PDA+TYTVLIDSLGKANKM EAA+VMSEMLN GV+PT+RTYSALICGY
Sbjct: 408 QLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGY 467
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
A+AGQR AEETFDCM RSGI+PD+LAYSVMLDV +R K+++LY++MV DG PD
Sbjct: 468 ARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDP 527
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
+Y A++R L ++ +++++ I++IL K C + AA L+LA
Sbjct: 528 TVYGAMLRNLGRENKVEDIQRIIRDMEEVCGMNPQAIASILVKGECYEDAAGMLRLAISG 587
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+ +D NLLSIL+SYS SGR +EA++LL F+K + S QL+AEA +V C A+QL+AA
Sbjct: 588 SDEIDSENLLSILSSYSSSGRQAEALDLLQFLKGHVSKSNQLVAEASIVTLCKAKQLDAA 647
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
L EYN F GS M+E LI C ENE EASQI+SDM+ G++PS
Sbjct: 648 LKEYNDTREFDWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPS 698
Score = 77.4 bits (189), Expect = 7e-12
Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 2/287 (0%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD V++ LI++ KA M A ++++E+ +G+RP I TY+ LI ++
Sbjct: 236 MRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRE 295
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + FD M +PD Y+ M+ V+ R + K+ L++++ S GY PD Y
Sbjct: 296 SNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTY 355
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+L+ A + N +K++ CN E +++ ++
Sbjct: 356 NSLLYAFAREGNVDKVKEI-----------------------CN----EMVQMGFIR--- 385
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +I+ Y G+H A++L +K + + + L+ A ++ A +
Sbjct: 386 -DEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANV 444
Query: 734 YNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
++ ++ + K + + LI A + +EA + + M+ GI P
Sbjct: 445 MSEMLNIGV-KPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRP 490
Score = 74.3 bits (181), Expect = 6e-11
Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 8/149 (5%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q +KE++S G PDAVTY L+ + + + + ++ +EM+ G TY+ +I Y
Sbjct: 338 QLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMY 397
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K GQ LA + + M SG PD + Y+V++D ++ ++ + +M++ G P L
Sbjct: 398 GKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTL 457
Query: 365 AMYEALI--------RLLAEDSNERCLKK 427
Y ALI RL AE++ + C+++
Sbjct: 458 RTYSALICGYARAGQRLEAEETFD-CMRR 485
Score = 69.7 bits (169), Expect = 1e-09
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 6/297 (2%)
Frame = +2
Query: 14 KEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKA 193
+E+Q G + +++D+ + + +AEA + M G PT+ Y +I K
Sbjct: 829 QEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKG 888
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
+ E M +G +PD ++ ML ++ + +K+V +YQ + DG PD Y
Sbjct: 889 KRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTY 948
Query: 374 EALIRLLAED--SNERC--LKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
LI + D E C + ++ + A K A E +
Sbjct: 949 NTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLS 1008
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIA--EALVVIYCNARQL 715
K S++D+ ++ Y SG HS+A +LL+ +K+ G E IA L+V Y ++ Q
Sbjct: 1009 KGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKD--AGVEPTIATMHLLMVSYGSSGQP 1066
Query: 716 EAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
+ A ++ N ST + +I + +N+ + Q +MK G+EP ++
Sbjct: 1067 QEA-EKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRI 1122
Score = 67.8 bits (164), Expect = 5e-09
Identities = 36/125 (28%), Positives = 61/125 (48%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY LI + + + + EA V +M +P + TY+A+I Y + G
Sbjct: 272 EVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCG 331
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
AE+ F + G PD + Y+ +L R N K + +MV G++ D Y
Sbjct: 332 FSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYN 391
Query: 377 ALIRL 391
+I +
Sbjct: 392 TIIHM 396
Score = 66.2 bits (160), Expect = 2e-08
Identities = 60/287 (20%), Positives = 127/287 (44%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A A ++ +T V T++ Y+A++ YA+ G+ +
Sbjct: 174 PNARMLATILAVLGKANQEALAVEIFIRAEST-VDNTVQVYNAMMGVYARTGRFNKVQGM 232
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVR--SKNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M G +PD ++++ +++ ++ + ++ L ++ G PD+ Y LI
Sbjct: 233 LDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLISAC 292
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILT---KAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E +K +A+++ + G + A + K K D
Sbjct: 293 SRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDA 352
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ N + + +++ ++ +Y Q AL Y +
Sbjct: 353 VTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLY-R 411
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
+ L + LI S + + VEA+ + S+M G++P+ +
Sbjct: 412 DMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLR 458
Score = 65.5 bits (158), Expect = 3e-08
Identities = 39/127 (30%), Positives = 60/127 (47%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+ ++ G PD TY LI + ++ E +M EM G+ P + TY +LI +
Sbjct: 931 QIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAF 990
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AEE F+ +L G K D+ Y +M+ ++ S N K+ L M G P +
Sbjct: 991 GKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTI 1050
Query: 365 AMYEALI 385
A L+
Sbjct: 1051 ATMHLLM 1057
Score = 58.5 bits (140), Expect = 3e-06
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
++E+ S G D Y +++ + ++A ++S M + GV PTI T L+ Y
Sbjct: 1003 FEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGS 1062
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
+GQ AE+ + G+ L YS ++D ++++K+ + +M +G PD +
Sbjct: 1063 SGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRI 1122
Query: 371 YEALIRL--LAEDSNERCL 421
+ IR L+E +++ L
Sbjct: 1123 WTCFIRAASLSEHTHDAIL 1141
Score = 57.8 bits (138), Expect = 6e-06
Identities = 32/130 (24%), Positives = 63/130 (48%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+ +M++ PD TY +I G+ +A + E+ + G P TY++L+ +A+
Sbjct: 305 FDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAR 364
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G +E + M++ G D++ Y+ ++ ++ + ++ LY+DM G PD
Sbjct: 365 EGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAIT 424
Query: 371 YEALIRLLAE 400
Y LI L +
Sbjct: 425 YTVLIDSLGK 434
>ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X6 [Citrus sinensis]
Length = 1278
Score = 302 bits (773), Expect = 1e-79
Identities = 155/291 (53%), Positives = 208/291 (71%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++M+ +GR+PD VTYTVLIDSLGKANK++EAA+VMSEML+ V+PT+RTYSALICGY
Sbjct: 439 QLYRDMKLSGRNPDVVTYTVLIDSLGKANKISEAANVMSEMLDASVKPTLRTYSALICGY 498
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG+R AE+TF+CM RSGI+PD LAYSVMLD+ +R T K+++LYQ+MVS+G+ D
Sbjct: 499 AKAGKRLEAEKTFECMRRSGIRPDHLAYSVMLDIFLRFNETNKAMMLYQEMVSNGFTLDQ 558
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
A+YE +I +L ++ ++KVV IS+IL K C D AAE L+LA
Sbjct: 559 ALYEIMIGVLGRENKGEEIRKVVRDMKELSGINMQEISSILVKGECYDHAAEILRLAIRN 618
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+D LLSIL+SY++SGRH EA EL+ FVK++A S + +A +++ C A++L+AA
Sbjct: 619 GIELDHEKLLSILSSYNVSGRHLEACELIEFVKQHASESTPPLTQAFIIMLCKAQKLDAA 678
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
L+EY+ F S M+E LI SC NERF EASQ++SDM+ Y IEPS
Sbjct: 679 LEEYSNAWGFGFFCKSKTMYESLIHSCEYNERFAEASQLFSDMRFYNIEPS 729
Score = 70.1 bits (170), Expect = 1e-09
Identities = 62/297 (20%), Positives = 127/297 (42%), Gaps = 6/297 (2%)
Frame = +2
Query: 2 FQSYKE----MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTY 163
FQ +E M+ G PD V++ LI++ ++ M D+++E+ +G+RP I TY
Sbjct: 257 FQKVQELLDLMRKRGCEPDLVSFNTLINARLRSGAMVPNLGVDLLNEVRRSGLRPDIITY 316
Query: 164 SALICGYAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVS 343
+ +I ++ A + + + +PD Y+ M+ V+ R +K+ L++++ S
Sbjct: 317 NTIISACSRESNLEEAMKVYGDLEAHNCQPDLWTYNAMISVYGRCGLFEKAEQLFKELES 376
Query: 344 DGYVPDLAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEK 523
G+ PD Y +L+ A + N +K++ +
Sbjct: 377 KGFFPDAVTYNSLLYAFAREGNVEKVKEI---------------------------SENM 409
Query: 524 LKLAAMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCN 703
LK+ K D+ +I+ Y G+H A++L +K + + + L+
Sbjct: 410 LKMGFGK----DEMTYNTIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYTVLIDSLGK 465
Query: 704 ARQLEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
A ++ A + ++ + K + + LI A+ + +EA + + M+ GI P
Sbjct: 466 ANKISEAANVMSEMLDASV-KPTLRTYSALICGYAKAGKRLEAEKTFECMRRSGIRP 521
Score = 66.6 bits (161), Expect = 1e-08
Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 8/288 (2%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY +I + + + + EA V ++ +P + TY+A+I Y + G
Sbjct: 303 EVRRSGLRPDIITYNTIISACSRESNLEEAMKVYGDLEAHNCQPDLWTYNAMISVYGRCG 362
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
AE+ F + G PD + Y+ +L R N +K + ++M+ G+ D Y
Sbjct: 363 LFEKAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEISENMLKMGFGKDEMTYN 422
Query: 377 ALIRLLA-EDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+I + + ++ L+ + ++ G A K+ AA S
Sbjct: 423 TIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYTVLIDSLG----KANKISEAANVMSE 478
Query: 554 VDQGNLLSILASYSL-------SGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQ 712
+ ++ L +YS +G+ EA + ++ + + L ++ I+ +
Sbjct: 479 MLDASVKPTLRTYSALICGYAKAGKRLEAEKTFECMRRSGIRPDHLAYSVMLDIFLRFNE 538
Query: 713 LEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMK 856
A+ Y + S F A++E +I + E ++ DMK
Sbjct: 539 TNKAMMLYQEMVS-NGFTLDQALYEIMIGVLGRENKGEEIRKVVRDMK 585
Score = 66.6 bits (161), Expect = 1e-08
Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+E+Q A PD T+ LI + + E +M EM G+ P + TY +LI +
Sbjct: 962 QVYQEIQEADLQPDEDTFNTLIIMYCRDCRPEEGLSLMQEMRKLGLEPKLDTYKSLISAF 1021
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K Q AEE F+ + K D+ Y M+ ++ S KS L M G P +
Sbjct: 1022 GKQQQLEQAEELFEELRSKRCKLDRSFYHTMMKIYRNSGYHSKSENLLNMMKESGVEPTI 1081
Query: 365 AMYEALIRLLAEDSNERCLKKVV--XXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAA 538
A L+ + + +KV+ S I D A KL
Sbjct: 1082 ATMHLLMVSYSSSGQPQEAEKVLSNLKGTSLNLSTLPYSSVIAAYLRNGDSAVGIQKLIE 1141
Query: 539 MKNSRVDQGNLL--SILASYSLSGRHSEAIELLNFVKE 646
MK ++ + + + + SLS SEAI LLN +++
Sbjct: 1142 MKEEGIEPDHRIWTCFVRAASLSQCSSEAIILLNAIRD 1179
Score = 64.3 bits (155), Expect = 6e-08
Identities = 59/287 (20%), Positives = 124/287 (43%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A + + V T++ Y+A++ YA+ G+ +E
Sbjct: 205 PNARMLATILAVLGKANQENLAVETFMRA-ESAVDDTVQVYNAMMGIYARNGRFQKVQEL 263
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M + G +PD ++++ +++ +RS V L ++ G PD+ Y +I
Sbjct: 264 LDLMRKRGCEPDLVSFNTLINARLRSGAMVPNLGVDLLNEVRRSGLRPDIITYNTIISAC 323
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILT---KAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E +K +A+++ + G + A + K K D
Sbjct: 324 SRESNLEEAMKVYGDLEAHNCQPDLWTYNAMISVYGRCGLFEKAEQLFKELESKGFFPDA 383
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + + G +++ ++ +Y Q + AL Y +
Sbjct: 384 VTYNSLLYAFAREGNVEKVKEISENMLKMGFGKDEMTYNTIIHMYGKQGQHDVALQLY-R 442
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
+ L + LI S + + EA+ + S+M ++P+ +
Sbjct: 443 DMKLSGRNPDVVTYTVLIDSLGKANKISEAANVMSEMLDASVKPTLR 489
Score = 63.5 bits (153), Expect = 1e-07
Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 6/281 (2%)
Frame = +2
Query: 62 VLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEETFDCMLRS 241
+++D+ ++ + E + M G PT+ Y +I + K + E M +
Sbjct: 876 LMLDAFARSGNIFEVKKIYHGMKAAGYFPTMYLYRVMIGLFCKGKRVRDVEAMVSEMKEA 935
Query: 242 GIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYEALIRLLAEDSN-ERC 418
G KPD ++ ML ++ ++ KK++ +YQ++ PD + LI + D E
Sbjct: 936 GFKPDLSIWNSMLKLYTGIEDFKKTIQVYQEIQEADLQPDEDTFNTLIIMYCRDCRPEEG 995
Query: 419 LKKVVXXXXXXXXXXXXRISAILTKAGCN---DFAAEKLKLAAMKNSRVDQGNLLSILAS 589
L + ++++ G + A E + K ++D+ +++
Sbjct: 996 LSLMQEMRKLGLEPKLDTYKSLISAFGKQQQLEQAEELFEELRSKRCKLDRSFYHTMMKI 1055
Query: 590 YSLSGRHSEAIELLNFVKENAPGSEQLIA--EALVVIYCNARQLEAALDEYNKNNSLCMF 763
Y SG HS++ LLN +KE+ G E IA L+V Y ++ Q + A ++ N
Sbjct: 1056 YRNSGYHSKSENLLNMMKES--GVEPTIATMHLLMVSYSSSGQPQEA-EKVLSNLKGTSL 1112
Query: 764 KGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
ST + +I + N Q +MK GIEP ++
Sbjct: 1113 NLSTLPYSSVIAAYLRNGDSAVGIQKLIEMKEEGIEPDHRI 1153
>ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568877582|ref|XP_006491808.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877584|ref|XP_006491809.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X3 [Citrus sinensis]
gi|568877586|ref|XP_006491810.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X4 [Citrus sinensis]
gi|568877588|ref|XP_006491811.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X5 [Citrus sinensis]
Length = 1459
Score = 302 bits (773), Expect = 1e-79
Identities = 155/291 (53%), Positives = 208/291 (71%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++M+ +GR+PD VTYTVLIDSLGKANK++EAA+VMSEML+ V+PT+RTYSALICGY
Sbjct: 439 QLYRDMKLSGRNPDVVTYTVLIDSLGKANKISEAANVMSEMLDASVKPTLRTYSALICGY 498
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG+R AE+TF+CM RSGI+PD LAYSVMLD+ +R T K+++LYQ+MVS+G+ D
Sbjct: 499 AKAGKRLEAEKTFECMRRSGIRPDHLAYSVMLDIFLRFNETNKAMMLYQEMVSNGFTLDQ 558
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
A+YE +I +L ++ ++KVV IS+IL K C D AAE L+LA
Sbjct: 559 ALYEIMIGVLGRENKGEEIRKVVRDMKELSGINMQEISSILVKGECYDHAAEILRLAIRN 618
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+D LLSIL+SY++SGRH EA EL+ FVK++A S + +A +++ C A++L+AA
Sbjct: 619 GIELDHEKLLSILSSYNVSGRHLEACELIEFVKQHASESTPPLTQAFIIMLCKAQKLDAA 678
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
L+EY+ F S M+E LI SC NERF EASQ++SDM+ Y IEPS
Sbjct: 679 LEEYSNAWGFGFFCKSKTMYESLIHSCEYNERFAEASQLFSDMRFYNIEPS 729
Score = 70.1 bits (170), Expect = 1e-09
Identities = 62/297 (20%), Positives = 127/297 (42%), Gaps = 6/297 (2%)
Frame = +2
Query: 2 FQSYKE----MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTY 163
FQ +E M+ G PD V++ LI++ ++ M D+++E+ +G+RP I TY
Sbjct: 257 FQKVQELLDLMRKRGCEPDLVSFNTLINARLRSGAMVPNLGVDLLNEVRRSGLRPDIITY 316
Query: 164 SALICGYAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVS 343
+ +I ++ A + + + +PD Y+ M+ V+ R +K+ L++++ S
Sbjct: 317 NTIISACSRESNLEEAMKVYGDLEAHNCQPDLWTYNAMISVYGRCGLFEKAEQLFKELES 376
Query: 344 DGYVPDLAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEK 523
G+ PD Y +L+ A + N +K++ +
Sbjct: 377 KGFFPDAVTYNSLLYAFAREGNVEKVKEI---------------------------SENM 409
Query: 524 LKLAAMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCN 703
LK+ K D+ +I+ Y G+H A++L +K + + + L+
Sbjct: 410 LKMGFGK----DEMTYNTIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYTVLIDSLGK 465
Query: 704 ARQLEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
A ++ A + ++ + K + + LI A+ + +EA + + M+ GI P
Sbjct: 466 ANKISEAANVMSEMLDASV-KPTLRTYSALICGYAKAGKRLEAEKTFECMRRSGIRP 521
Score = 66.6 bits (161), Expect = 1e-08
Identities = 59/288 (20%), Positives = 119/288 (41%), Gaps = 8/288 (2%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY +I + + + + EA V ++ +P + TY+A+I Y + G
Sbjct: 303 EVRRSGLRPDIITYNTIISACSRESNLEEAMKVYGDLEAHNCQPDLWTYNAMISVYGRCG 362
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
AE+ F + G PD + Y+ +L R N +K + ++M+ G+ D Y
Sbjct: 363 LFEKAEQLFKELESKGFFPDAVTYNSLLYAFAREGNVEKVKEISENMLKMGFGKDEMTYN 422
Query: 377 ALIRLLA-EDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+I + + ++ L+ + ++ G A K+ AA S
Sbjct: 423 TIIHMYGKQGQHDVALQLYRDMKLSGRNPDVVTYTVLIDSLG----KANKISEAANVMSE 478
Query: 554 VDQGNLLSILASYSL-------SGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQ 712
+ ++ L +YS +G+ EA + ++ + + L ++ I+ +
Sbjct: 479 MLDASVKPTLRTYSALICGYAKAGKRLEAEKTFECMRRSGIRPDHLAYSVMLDIFLRFNE 538
Query: 713 LEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMK 856
A+ Y + S F A++E +I + E ++ DMK
Sbjct: 539 TNKAMMLYQEMVS-NGFTLDQALYEIMIGVLGRENKGEEIRKVVRDMK 585
Score = 66.6 bits (161), Expect = 1e-08
Identities = 59/218 (27%), Positives = 90/218 (41%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+E+Q A PD T+ LI + + E +M EM G+ P + TY +LI +
Sbjct: 962 QVYQEIQEADLQPDEDTFNTLIIMYCRDCRPEEGLSLMQEMRKLGLEPKLDTYKSLISAF 1021
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K Q AEE F+ + K D+ Y M+ ++ S KS L M G P +
Sbjct: 1022 GKQQQLEQAEELFEELRSKRCKLDRSFYHTMMKIYRNSGYHSKSENLLNMMKESGVEPTI 1081
Query: 365 AMYEALIRLLAEDSNERCLKKVV--XXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAA 538
A L+ + + +KV+ S I D A KL
Sbjct: 1082 ATMHLLMVSYSSSGQPQEAEKVLSNLKGTSLNLSTLPYSSVIAAYLRNGDSAVGIQKLIE 1141
Query: 539 MKNSRVDQGNLL--SILASYSLSGRHSEAIELLNFVKE 646
MK ++ + + + + SLS SEAI LLN +++
Sbjct: 1142 MKEEGIEPDHRIWTCFVRAASLSQCSSEAIILLNAIRD 1179
Score = 64.3 bits (155), Expect = 6e-08
Identities = 59/287 (20%), Positives = 124/287 (43%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A + + V T++ Y+A++ YA+ G+ +E
Sbjct: 205 PNARMLATILAVLGKANQENLAVETFMRA-ESAVDDTVQVYNAMMGIYARNGRFQKVQEL 263
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M + G +PD ++++ +++ +RS V L ++ G PD+ Y +I
Sbjct: 264 LDLMRKRGCEPDLVSFNTLINARLRSGAMVPNLGVDLLNEVRRSGLRPDIITYNTIISAC 323
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILT---KAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E +K +A+++ + G + A + K K D
Sbjct: 324 SRESNLEEAMKVYGDLEAHNCQPDLWTYNAMISVYGRCGLFEKAEQLFKELESKGFFPDA 383
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + + G +++ ++ +Y Q + AL Y +
Sbjct: 384 VTYNSLLYAFAREGNVEKVKEISENMLKMGFGKDEMTYNTIIHMYGKQGQHDVALQLY-R 442
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
+ L + LI S + + EA+ + S+M ++P+ +
Sbjct: 443 DMKLSGRNPDVVTYTVLIDSLGKANKISEAANVMSEMLDASVKPTLR 489
Score = 63.5 bits (153), Expect = 1e-07
Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 6/281 (2%)
Frame = +2
Query: 62 VLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEETFDCMLRS 241
+++D+ ++ + E + M G PT+ Y +I + K + E M +
Sbjct: 876 LMLDAFARSGNIFEVKKIYHGMKAAGYFPTMYLYRVMIGLFCKGKRVRDVEAMVSEMKEA 935
Query: 242 GIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYEALIRLLAEDSN-ERC 418
G KPD ++ ML ++ ++ KK++ +YQ++ PD + LI + D E
Sbjct: 936 GFKPDLSIWNSMLKLYTGIEDFKKTIQVYQEIQEADLQPDEDTFNTLIIMYCRDCRPEEG 995
Query: 419 LKKVVXXXXXXXXXXXXRISAILTKAGCN---DFAAEKLKLAAMKNSRVDQGNLLSILAS 589
L + ++++ G + A E + K ++D+ +++
Sbjct: 996 LSLMQEMRKLGLEPKLDTYKSLISAFGKQQQLEQAEELFEELRSKRCKLDRSFYHTMMKI 1055
Query: 590 YSLSGRHSEAIELLNFVKENAPGSEQLIA--EALVVIYCNARQLEAALDEYNKNNSLCMF 763
Y SG HS++ LLN +KE+ G E IA L+V Y ++ Q + A ++ N
Sbjct: 1056 YRNSGYHSKSENLLNMMKES--GVEPTIATMHLLMVSYSSSGQPQEA-EKVLSNLKGTSL 1112
Query: 764 KGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
ST + +I + N Q +MK GIEP ++
Sbjct: 1113 NLSTLPYSSVIAAYLRNGDSAVGIQKLIEMKEEGIEPDHRI 1153
>ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Solanum lycopersicum]
Length = 1464
Score = 301 bits (770), Expect = 3e-79
Identities = 156/294 (53%), Positives = 207/294 (70%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y +M S+GR PD +TYT+LIDSLGK NKMAEA+ VMSEMLN G++PT+RTYSALICGY
Sbjct: 458 QVYNDMTSSGRSPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVRTYSALICGY 517
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AK G+R AE+ FDCM+RSGI+PD LAY+VMLD+++R TKK+++LY DMV +G+ PDL
Sbjct: 518 AKVGKRVDAEDMFDCMVRSGIQPDHLAYTVMLDMNLRFGETKKAMMLYHDMVHNGFTPDL 577
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
A+YE ++R L + E ++ V+ IS++L K C DFAA+ L+L +
Sbjct: 578 ALYEFMLRSLGRANEEENIQIVIKDLKELGNLGPQSISSLLIKGECYDFAAKMLRLVIEE 637
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
S + +LLSIL SYS SG+ SEAI+LLNFVKE+ S++LI +A ++I C A+ L AA
Sbjct: 638 GSEFNHDDLLSILGSYSSSGKISEAIKLLNFVKEHDSRSKKLIIDASIIINCKAQNLNAA 697
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
LDEY + F S ++FE LI C E E F EASQI+SDM+ G+EPS +
Sbjct: 698 LDEYRETGDSYTF--SISVFESLIKCCEEAELFAEASQIFSDMRAKGVEPSQDI 749
Score = 72.4 bits (176), Expect = 2e-10
Identities = 35/125 (28%), Positives = 67/125 (53%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+ E+++ G +PDAVTY L+ + + + + ++ EM+N G TY+ +I Y K
Sbjct: 390 FNELEANGFYPDAVTYNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGK 449
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G+ LA + ++ M SG PD + Y++++D + ++ + +M++ G P +
Sbjct: 450 QGRHDLALQVYNDMTSSGRSPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVRT 509
Query: 371 YEALI 385
Y ALI
Sbjct: 510 YSALI 514
Score = 71.2 bits (173), Expect = 5e-10
Identities = 39/141 (27%), Positives = 70/141 (49%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+ +M+S PD TY +I G+ EAA + +E+ G P TY++L+ +A+
Sbjct: 355 FNDMESHRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTYNSLLHAFAR 414
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G +E + M+ G D++ Y+ ++D++ + ++ +Y DM S G PD+
Sbjct: 415 QGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYNDMTSSGRSPDVIT 474
Query: 371 YEALIRLLAEDSNERCLKKVV 433
Y LI L +D+ KV+
Sbjct: 475 YTILIDSLGKDNKMAEASKVM 495
Score = 70.9 bits (172), Expect = 6e-10
Identities = 58/287 (20%), Positives = 127/287 (44%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A A ++ + T++ Y++++ YA+ G+ + ++
Sbjct: 224 PNARMLATILAVLGKANQEALAVEIFMRA-EQSIGNTVQVYNSMMGVYARNGRFSQVQQL 282
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
+ M G++PD ++++ +++ ++S ++ L ++ S G PD+ Y LI
Sbjct: 283 LELMHERGLEPDLVSFNTLINARLKSGPMTPNLAIELLDEVRSSGIQPDIITYNTLISAC 342
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILT---KAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E +K +A+++ + G + AA D
Sbjct: 343 SRESNVEEAVKVFNDMESHRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDA 402
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + G +++ ++ +Y + + AL YN
Sbjct: 403 VTYNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYND 462
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
S + LI S ++ + EAS++ S+M GI+P+ +
Sbjct: 463 MTSSGR-SPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVR 508
Score = 68.2 bits (165), Expect = 4e-09
Identities = 35/123 (28%), Positives = 65/123 (52%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++S+G PD +TY LI + + + + EA V ++M + +P + TY+A+I + + G
Sbjct: 322 EVRSSGIQPDIITYNTLISACSRESNVEEAVKVFNDMESHRCQPDLWTYNAMISVFGRCG 381
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
A F+ + +G PD + Y+ +L R N +K + ++MV+ G+ D Y
Sbjct: 382 MDGEAARLFNELEANGFYPDAVTYNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYN 441
Query: 377 ALI 385
+I
Sbjct: 442 TII 444
Score = 65.1 bits (157), Expect = 4e-08
Identities = 65/297 (21%), Positives = 119/297 (40%), Gaps = 6/297 (2%)
Frame = +2
Query: 14 KEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKA 193
+E+Q G + +++++ +A + E + M G PT+ Y +I ++
Sbjct: 877 QELQDMGFKISKSSILLMLEAFAQAGNIFEVRKIYHGMRAAGYLPTMHLYRVIIGLLSRT 936
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
Q AE M +G KPD ++ ML ++ R ++ KK+V +YQ + G PDL Y
Sbjct: 937 KQVRDAEAMLSEMEEAGFKPDLSIWNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTY 996
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDF----AAEKLKLAAM 541
LI + D +V L A C + A E +
Sbjct: 997 NTLIIMYCRDRRPHESLLLVHEMKRLDLFPERDTYKSLIAAFCKELMLEQAEELFESLRS 1056
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEA 721
+ +D+ ++ Y SG HS+A +L+ +KE+ L+ Y + Q
Sbjct: 1057 EGHNLDRSFYHLMMKMYRSSGNHSKAEKLIEKMKESGIEPSDATMHLLMTSYGTSGQPME 1116
Query: 722 ALDEYN--KNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
A N K+N + + ST + +I + ++ + +M G+EP ++
Sbjct: 1117 AEKVLNSLKSNGVNL---STLQYGSVIDAYLKSREYETGLLKLREMIGDGLEPDHRI 1170
Score = 64.7 bits (156), Expect = 5e-08
Identities = 59/287 (20%), Positives = 116/287 (40%), Gaps = 2/287 (0%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M G PD V++ LI++ K+ M A +++ E+ ++G++P I TY+ LI ++
Sbjct: 286 MHERGLEPDLVSFNTLINARLKSGPMTPNLAIELLDEVRSSGIQPDIITYNTLISACSRE 345
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + F+ M +PD Y+ M+ V R ++ L+ ++ ++G+ PD Y
Sbjct: 346 SNVEEAVKVFNDMESHRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTY 405
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+L+ A N +K++ E + + K
Sbjct: 406 NSLLHAFARQGNIEKVKEI---------------------------CEEMVNMGFGK--- 435
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +I+ Y GRH A+++ N + + S +I +++ A +
Sbjct: 436 -DEMTYNTIIDMYGKQGRHDLALQVYNDMTSSG-RSPDVITYTILIDSLGKDNKMAEASK 493
Query: 734 YNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
K + + LI A+ + V+A ++ M GI+P
Sbjct: 494 VMSEMLNAGIKPTVRTYSALICGYAKVGKRVDAEDMFDCMVRSGIQP 540
>ref|XP_007029499.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
gi|508718104|gb|EOY10001.1| Pentatricopeptide repeat
(PPR) superfamily protein [Theobroma cacao]
Length = 1458
Score = 300 bits (769), Expect = 4e-79
Identities = 156/291 (53%), Positives = 203/291 (69%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++M+ +GR+PD VTYTVLIDSLGKANK+ EA++VMSEML+ GV+PT+RTYSALICGY
Sbjct: 442 QLYRDMKLSGRNPDVVTYTVLIDSLGKANKIKEASNVMSEMLDVGVKPTVRTYSALICGY 501
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG AEETF+CM RSGI+ D LAYSVMLD+ +R T K+++LY++MV DG+ PD
Sbjct: 502 AKAGMAVEAEETFNCMRRSGIRLDFLAYSVMLDILLRCNKTTKALLLYREMVRDGFTPDH 561
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
+YE +++ L +++ ++K+V IS+ L K C D AA+ L+L
Sbjct: 562 TLYEVMLQALRKENKLEDIEKMVRDMEELCGMNPQAISSFLVKGECYDLAAQMLRLGISN 621
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA 724
+D NLLS+L+SYS SGRH EA ELL F+KE+A G QLI EALVV+ C A Q++AA
Sbjct: 622 GDELDGENLLSVLSSYSSSGRHKEACELLEFLKEHAEGYNQLITEALVVMLCEACQVDAA 681
Query: 725 LDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
L EY+ F ST MF LI C ENE EASQI+SDM+ +G+EPS
Sbjct: 682 LKEYSNAKDSVFFSSST-MFASLIQCCEENELLTEASQIFSDMRFFGVEPS 731
Score = 73.6 bits (179), Expect = 1e-10
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 6/295 (2%)
Frame = +2
Query: 2 FQSYKE----MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTY 163
FQ +E M+ G PD V++ LI++ KA M ++++E+ +G+RP I TY
Sbjct: 260 FQKVQELLDLMRERGCEPDLVSFNTLINAKLKAGAMLPDLGVELLNEVRRSGLRPDIITY 319
Query: 164 SALICGYAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVS 343
+ LI ++ A + FD M +PD Y+ M+ V+ R K+ L++D+ S
Sbjct: 320 NTLISACSRESNLEEAMKVFDDMDGHNCQPDIWTYNAMISVYGRCGMAYKAEQLFRDLES 379
Query: 344 DGYVPDLAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEK 523
G+ PD Y +L+ A + N +K++ E
Sbjct: 380 KGFFPDAVTYNSLLYAFAREGNVDKVKEI---------------------------CEEM 412
Query: 524 LKLAAMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCN 703
+++ K D+ +I+ Y G+H A++L +K + + + L+
Sbjct: 413 VEIGLGK----DEMTYNTIIHMYGKQGQHDLALQLYRDMKLSGRNPDVVTYTVLIDSLGK 468
Query: 704 ARQLEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGI 868
A +++ A + ++ + + K + + LI A+ VEA + ++ M+ GI
Sbjct: 469 ANKIKEASNVMSEMLDVGV-KPTVRTYSALICGYAKAGMAVEAEETFNCMRRSGI 522
Score = 70.5 bits (171), Expect = 8e-10
Identities = 64/297 (21%), Positives = 124/297 (41%), Gaps = 9/297 (3%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++ +G PD +TY LI + + + + EA V +M +P I TY+A+I Y + G
Sbjct: 306 EVRRSGLRPDIITYNTLISACSRESNLEEAMKVFDDMDGHNCQPDIWTYNAMISVYGRCG 365
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
AE+ F + G PD + Y+ +L R N K + ++MV G D Y
Sbjct: 366 MAYKAEQLFRDLESKGFFPDAVTYNSLLYAFAREGNVDKVKEICEEMVEIGLGKDEMTYN 425
Query: 377 ALIRLLA-EDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAA-MKNS 550
+I + + ++ L+ + ++ G A K+K A+ + +
Sbjct: 426 TIIHMYGKQGQHDLALQLYRDMKLSGRNPDVVTYTVLIDSLG----KANKIKEASNVMSE 481
Query: 551 RVDQG------NLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQ 712
+D G +++ Y+ +G EA E N ++ + + L ++ I +
Sbjct: 482 MLDVGVKPTVRTYSALICGYAKAGMAVEAEETFNCMRRSGIRLDFLAYSVMLDILLRCNK 541
Query: 713 LEAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDM-KLYGIEPSA 880
AL Y + F ++E ++ + + + + ++ DM +L G+ P A
Sbjct: 542 TTKALLLY-REMVRDGFTPDHTLYEVMLQALRKENKLEDIEKMVRDMEELCGMNPQA 597
Score = 66.2 bits (160), Expect = 2e-08
Identities = 63/287 (21%), Positives = 127/287 (44%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A ++ + V T++ Y+A++ YA+ G+ +E
Sbjct: 208 PNARMLATILAVLGKANQGVLAVEIFTRA-EPAVGNTVQVYNAMMGVYARNGRFQKVQEL 266
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVR--SKNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
D M G +PD ++++ +++ ++ + V L ++ G PD+ Y LI
Sbjct: 267 LDLMRERGCEPDLVSFNTLINAKLKAGAMLPDLGVELLNEVRRSGLRPDIITYNTLISAC 326
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILTKAG-CN-DFAAEKL-KLAAMKNSRVDQ 562
+ +SN E +K +A+++ G C + AE+L + K D
Sbjct: 327 SRESNLEEAMKVFDDMDGHNCQPDIWTYNAMISVYGRCGMAYKAEQLFRDLESKGFFPDA 386
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + E G +++ ++ +Y Q + AL Y +
Sbjct: 387 VTYNSLLYAFAREGNVDKVKEICEEMVEIGLGKDEMTYNTIIHMYGKQGQHDLALQLY-R 445
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
+ L + LI S + + EAS + S+M G++P+ +
Sbjct: 446 DMKLSGRNPDVVTYTVLIDSLGKANKIKEASNVMSEMLDVGVKPTVR 492
Score = 63.9 bits (154), Expect = 8e-08
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 4/218 (1%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y++++ AG PD TY LI + + E +M EM G+ P + TY +LI +
Sbjct: 964 QIYQQIKEAGLEPDEDTYNTLIIMYCRDRRPEEGLSLMYEMRKVGLEPKLDTYKSLISAF 1023
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AEE F+ + K D+ Y M+ + + N K+ L M G P +
Sbjct: 1024 GKQQLLEQAEELFNELHSKCYKLDRSFYHTMMKIFRNAGNHSKAESLLSMMKEAGVEPTI 1083
Query: 365 AMYEALIRLLAEDSN----ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKL 532
A L+ E+ L + + + G + +KL
Sbjct: 1084 ATMHLLMVSYGSSGQPQEAEKVLTSLKETGLNLTTLPYSSVINAYLRNGDYNVGIQKLME 1143
Query: 533 AAMKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE 646
+ VD + + SLS SEAI LLN +++
Sbjct: 1144 MKKEGLAVDHRIWTCFIRAASLSNHTSEAIILLNALRD 1181
Score = 58.9 bits (141), Expect = 3e-06
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 6/243 (2%)
Frame = +2
Query: 14 KEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKA 193
+E+Q G + +++D+ +A + E + S M G PT+ Y + + K
Sbjct: 862 QELQDMGFKMSKSSILLMLDAFAQAGNIFEVKKIYSGMKAAGYYPTMHLYRIMTRLFCKG 921
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
+ AE M +G KPD ++ ML ++ ++ KK+ +YQ + G PD Y
Sbjct: 922 KRVRDAEAMVSEMEEAGFKPDLSIWNSMLKLYSGIEDYKKTAQIYQQIKEAGLEPDEDTY 981
Query: 374 EALIRLLAEDSN-ERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDF---AAEKLKLAAM 541
LI + D E L + ++++ G A E
Sbjct: 982 NTLIIMYCRDRRPEEGLSLMYEMRKVGLEPKLDTYKSLISAFGKQQLLEQAEELFNELHS 1041
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIA--EALVVIYCNARQL 715
K ++D+ +++ + +G HS+A LL+ +KE G E IA L+V Y ++ Q
Sbjct: 1042 KCYKLDRSFYHTMMKIFRNAGNHSKAESLLSMMKE--AGVEPTIATMHLLMVSYGSSGQP 1099
Query: 716 EAA 724
+ A
Sbjct: 1100 QEA 1102
>ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 1277
Score = 294 bits (753), Expect = 3e-77
Identities = 155/296 (52%), Positives = 207/296 (69%), Gaps = 2/296 (0%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y +M S+GR PD +TYT+LIDSLGK NKMAEA+ VMSEMLN G++PT+RTYSALICGY
Sbjct: 457 QVYNDMTSSGRSPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVRTYSALICGY 516
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG+R AE+ FDCM+RSGI PD LAY+VMLD+++R TKK+++LY DMV +G+ P+L
Sbjct: 517 AKAGKRVDAEDMFDCMVRSGIHPDHLAYTVMLDMNLRFGETKKAMLLYHDMVRNGFTPEL 576
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
A+YE ++R L + E ++ V+ IS++L K C DFAA+ L+L +
Sbjct: 577 ALYEFMLRSLGRANEEENIQIVIKDLKELGNLGPQSISSLLIKGECYDFAAKMLRLVIEE 636
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE--NAPGSEQLIAEALVVIYCNARQLE 718
S + +LLSIL SYS SG+ SEAIELLNFVKE + S++LI +A ++I C A+ L
Sbjct: 637 GSEFNHDDLLSILGSYSSSGKISEAIELLNFVKEHDSRSMSKKLITDASIIINCKAQNLN 696
Query: 719 AALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
AALDEY + F S +++E LI C E E F EASQI+SDM+ G++PS +
Sbjct: 697 AALDEYRETGDSYTF--SISVYESLIKCCEEAELFAEASQIFSDMRAKGVKPSQDI 750
Score = 72.4 bits (176), Expect = 2e-10
Identities = 40/143 (27%), Positives = 71/143 (49%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q + +M+S PD TY +I G+ EAA + +E+ G P TY++L+ +
Sbjct: 352 QVFNDMESHRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTYNSLLHAF 411
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
A+ G +E + M+ G D++ Y+ ++D++ + ++ +Y DM S G PD+
Sbjct: 412 ARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYNDMTSSGRSPDV 471
Query: 365 AMYEALIRLLAEDSNERCLKKVV 433
Y LI L +D+ KV+
Sbjct: 472 ITYTILIDSLGKDNKMAEASKVM 494
Score = 72.4 bits (176), Expect = 2e-10
Identities = 35/125 (28%), Positives = 67/125 (53%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+ E+++ G +PDAVTY L+ + + + + ++ EM+N G TY+ +I Y K
Sbjct: 389 FNELEANGFYPDAVTYNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGK 448
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G+ LA + ++ M SG PD + Y++++D + ++ + +M++ G P +
Sbjct: 449 QGRHDLALQVYNDMTSSGRSPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVRT 508
Query: 371 YEALI 385
Y ALI
Sbjct: 509 YSALI 513
Score = 69.7 bits (169), Expect = 1e-09
Identities = 58/287 (20%), Positives = 127/287 (44%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A A ++ + T++ Y++++ YA+ G+ + ++
Sbjct: 223 PNARMLATILAVLGKANQEALAVEIFMRA-EQSIGNTVQVYNSMMGVYARNGRFSRVQQL 281
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
+ M GI+PD ++++ +++ ++S ++ L ++ S G PD+ Y LI
Sbjct: 282 LELMHERGIEPDLVSFNTLINARLKSGPMTPNLAIELLDEVRSSGTQPDIITYNTLISAC 341
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILT---KAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E ++ +A+++ + G + AA D
Sbjct: 342 SRESNVEEAVQVFNDMESHRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDA 401
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + G +++ ++ +Y + + AL YN
Sbjct: 402 VTYNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYND 461
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
S + LI S ++ + EAS++ S+M GI+P+ +
Sbjct: 462 MTSSGR-SPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVR 507
Score = 69.3 bits (168), Expect = 2e-09
Identities = 35/123 (28%), Positives = 65/123 (52%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++S+G PD +TY LI + + + + EA V ++M + +P + TY+A+I + + G
Sbjct: 321 EVRSSGTQPDIITYNTLISACSRESNVEEAVQVFNDMESHRCQPDLWTYNAMISVFGRCG 380
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
A F+ + +G PD + Y+ +L R N +K + ++MV+ G+ D Y
Sbjct: 381 MDGEAARLFNELEANGFYPDAVTYNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYN 440
Query: 377 ALI 385
+I
Sbjct: 441 TII 443
Score = 63.9 bits (154), Expect = 8e-08
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 4/216 (1%)
Frame = +2
Query: 14 KEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKA 193
+E+Q G + +++++ +A + E + M G PT+ Y +I ++
Sbjct: 878 QELQDMGFKISKSSILLMLEAFAQAGNVFEVKKIYHGMRAAGYLPTMHLYRVIIGLLSRT 937
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
Q AE M +G KPD ++ ML ++ R ++ KK+V +YQ + G PDL Y
Sbjct: 938 KQVRDAEAMLSEMEEAGFKPDLSIWNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTY 997
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDF----AAEKLKLAAM 541
LI + D +V L A C + A E +
Sbjct: 998 NTLIIMYCRDRRPHESLLLVNEMKRLGLFPERDTYKSLIAAFCKELMLEQAEELFESLRS 1057
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKEN 649
+ +D+ ++ Y SG HS+A +L+ +KE+
Sbjct: 1058 EGHNLDRSFYHLMMKMYRSSGNHSKAEKLIEKMKES 1093
Score = 63.2 bits (152), Expect = 1e-07
Identities = 59/287 (20%), Positives = 114/287 (39%), Gaps = 2/287 (0%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M G PD V++ LI++ K+ M A +++ E+ ++G +P I TY+ LI ++
Sbjct: 285 MHERGIEPDLVSFNTLINARLKSGPMTPNLAIELLDEVRSSGTQPDIITYNTLISACSRE 344
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + F+ M +PD Y+ M+ V R ++ L+ ++ ++G+ PD Y
Sbjct: 345 SNVEEAVQVFNDMESHRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTY 404
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+L+ A N +K++ E + + K
Sbjct: 405 NSLLHAFARQGNIEKVKEI---------------------------CEEMVNMGFGK--- 434
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +I+ Y GRH A+++ N + + S +I +++ A +
Sbjct: 435 -DEMTYNTIIDMYGKQGRHDLALQVYNDMTSSG-RSPDVITYTILIDSLGKDNKMAEASK 492
Query: 734 YNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
K + + LI A+ + V+A ++ M GI P
Sbjct: 493 VMSEMLNAGIKPTVRTYSALICGYAKAGKRVDAEDMFDCMVRSGIHP 539
Score = 57.4 bits (137), Expect = 7e-06
Identities = 37/125 (29%), Positives = 58/125 (46%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y+ +Q AG PD TY LI + + E+ +++EM G+ P TY +LI + K
Sbjct: 982 YQRIQEAGLKPDLDTYNTLIIMYCRDRRPHESLLLVNEMKRLGLFPERDTYKSLIAAFCK 1041
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
AEE F+ + G D+ Y +M+ ++ S N K+ L + M G P A
Sbjct: 1042 ELMLEQAEELFESLRSEGHNLDRSFYHLMMKMYRSSGNHSKAEKLIEKMKESGIEPSDAT 1101
Query: 371 YEALI 385
L+
Sbjct: 1102 MHLLM 1106
>ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1476
Score = 294 bits (753), Expect = 3e-77
Identities = 155/296 (52%), Positives = 207/296 (69%), Gaps = 2/296 (0%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y +M S+GR PD +TYT+LIDSLGK NKMAEA+ VMSEMLN G++PT+RTYSALICGY
Sbjct: 457 QVYNDMTSSGRSPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVRTYSALICGY 516
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
AKAG+R AE+ FDCM+RSGI PD LAY+VMLD+++R TKK+++LY DMV +G+ P+L
Sbjct: 517 AKAGKRVDAEDMFDCMVRSGIHPDHLAYTVMLDMNLRFGETKKAMLLYHDMVRNGFTPEL 576
Query: 365 AMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMK 544
A+YE ++R L + E ++ V+ IS++L K C DFAA+ L+L +
Sbjct: 577 ALYEFMLRSLGRANEEENIQIVIKDLKELGNLGPQSISSLLIKGECYDFAAKMLRLVIEE 636
Query: 545 NSRVDQGNLLSILASYSLSGRHSEAIELLNFVKE--NAPGSEQLIAEALVVIYCNARQLE 718
S + +LLSIL SYS SG+ SEAIELLNFVKE + S++LI +A ++I C A+ L
Sbjct: 637 GSEFNHDDLLSILGSYSSSGKISEAIELLNFVKEHDSRSMSKKLITDASIIINCKAQNLN 696
Query: 719 AALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
AALDEY + F S +++E LI C E E F EASQI+SDM+ G++PS +
Sbjct: 697 AALDEYRETGDSYTF--SISVYESLIKCCEEAELFAEASQIFSDMRAKGVKPSQDI 750
Score = 72.4 bits (176), Expect = 2e-10
Identities = 40/143 (27%), Positives = 71/143 (49%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q + +M+S PD TY +I G+ EAA + +E+ G P TY++L+ +
Sbjct: 352 QVFNDMESHRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTYNSLLHAF 411
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
A+ G +E + M+ G D++ Y+ ++D++ + ++ +Y DM S G PD+
Sbjct: 412 ARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYNDMTSSGRSPDV 471
Query: 365 AMYEALIRLLAEDSNERCLKKVV 433
Y LI L +D+ KV+
Sbjct: 472 ITYTILIDSLGKDNKMAEASKVM 494
Score = 72.4 bits (176), Expect = 2e-10
Identities = 35/125 (28%), Positives = 67/125 (53%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
+ E+++ G +PDAVTY L+ + + + + ++ EM+N G TY+ +I Y K
Sbjct: 389 FNELEANGFYPDAVTYNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGK 448
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
G+ LA + ++ M SG PD + Y++++D + ++ + +M++ G P +
Sbjct: 449 QGRHDLALQVYNDMTSSGRSPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVRT 508
Query: 371 YEALI 385
Y ALI
Sbjct: 509 YSALI 513
Score = 69.7 bits (169), Expect = 1e-09
Identities = 58/287 (20%), Positives = 127/287 (44%), Gaps = 6/287 (2%)
Frame = +2
Query: 41 PDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEET 220
P+A ++ LGKAN+ A A ++ + T++ Y++++ YA+ G+ + ++
Sbjct: 223 PNARMLATILAVLGKANQEALAVEIFMRA-EQSIGNTVQVYNSMMGVYARNGRFSRVQQL 281
Query: 221 FDCMLRSGIKPDKLAYSVMLDVHVRS--KNTKKSVVLYQDMVSDGYVPDLAMYEALIRLL 394
+ M GI+PD ++++ +++ ++S ++ L ++ S G PD+ Y LI
Sbjct: 282 LELMHERGIEPDLVSFNTLINARLKSGPMTPNLAIELLDEVRSSGTQPDIITYNTLISAC 341
Query: 395 AEDSN-ERCLKKVVXXXXXXXXXXXXRISAILT---KAGCNDFAAEKLKLAAMKNSRVDQ 562
+ +SN E ++ +A+++ + G + AA D
Sbjct: 342 SRESNVEEAVQVFNDMESHRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDA 401
Query: 563 GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDEYNK 742
S+L +++ G + E+ + G +++ ++ +Y + + AL YN
Sbjct: 402 VTYNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYNTIIDMYGKQGRHDLALQVYND 461
Query: 743 NNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAK 883
S + LI S ++ + EAS++ S+M GI+P+ +
Sbjct: 462 MTSSGR-SPDVITYTILIDSLGKDNKMAEASKVMSEMLNAGIKPTVR 507
Score = 69.3 bits (168), Expect = 2e-09
Identities = 35/123 (28%), Positives = 65/123 (52%)
Frame = +2
Query: 17 EMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAG 196
E++S+G PD +TY LI + + + + EA V ++M + +P + TY+A+I + + G
Sbjct: 321 EVRSSGTQPDIITYNTLISACSRESNVEEAVQVFNDMESHRCQPDLWTYNAMISVFGRCG 380
Query: 197 QRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYE 376
A F+ + +G PD + Y+ +L R N +K + ++MV+ G+ D Y
Sbjct: 381 MDGEAARLFNELEANGFYPDAVTYNSLLHAFARQGNIEKVKEICEEMVNMGFGKDEMTYN 440
Query: 377 ALI 385
+I
Sbjct: 441 TII 443
Score = 63.9 bits (154), Expect = 8e-08
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 4/216 (1%)
Frame = +2
Query: 14 KEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKA 193
+E+Q G + +++++ +A + E + M G PT+ Y +I ++
Sbjct: 878 QELQDMGFKISKSSILLMLEAFAQAGNVFEVKKIYHGMRAAGYLPTMHLYRVIIGLLSRT 937
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
Q AE M +G KPD ++ ML ++ R ++ KK+V +YQ + G PDL Y
Sbjct: 938 KQVRDAEAMLSEMEEAGFKPDLSIWNSMLKLYTRIEDFKKTVHIYQRIQEAGLKPDLDTY 997
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDF----AAEKLKLAAM 541
LI + D +V L A C + A E +
Sbjct: 998 NTLIIMYCRDRRPHESLLLVNEMKRLGLFPERDTYKSLIAAFCKELMLEQAEELFESLRS 1057
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKEN 649
+ +D+ ++ Y SG HS+A +L+ +KE+
Sbjct: 1058 EGHNLDRSFYHLMMKMYRSSGNHSKAEKLIEKMKES 1093
Score = 63.2 bits (152), Expect = 1e-07
Identities = 59/287 (20%), Positives = 114/287 (39%), Gaps = 2/287 (0%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M G PD V++ LI++ K+ M A +++ E+ ++G +P I TY+ LI ++
Sbjct: 285 MHERGIEPDLVSFNTLINARLKSGPMTPNLAIELLDEVRSSGTQPDIITYNTLISACSRE 344
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + F+ M +PD Y+ M+ V R ++ L+ ++ ++G+ PD Y
Sbjct: 345 SNVEEAVQVFNDMESHRCQPDLWTYNAMISVFGRCGMDGEAARLFNELEANGFYPDAVTY 404
Query: 374 EALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSR 553
+L+ A N +K++ E + + K
Sbjct: 405 NSLLHAFARQGNIEKVKEI---------------------------CEEMVNMGFGK--- 434
Query: 554 VDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAALDE 733
D+ +I+ Y GRH A+++ N + + S +I +++ A +
Sbjct: 435 -DEMTYNTIIDMYGKQGRHDLALQVYNDMTSSG-RSPDVITYTILIDSLGKDNKMAEASK 492
Query: 734 YNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEP 874
K + + LI A+ + V+A ++ M GI P
Sbjct: 493 VMSEMLNAGIKPTVRTYSALICGYAKAGKRVDAEDMFDCMVRSGIHP 539
Score = 57.4 bits (137), Expect = 7e-06
Identities = 37/125 (29%), Positives = 58/125 (46%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y+ +Q AG PD TY LI + + E+ +++EM G+ P TY +LI + K
Sbjct: 982 YQRIQEAGLKPDLDTYNTLIIMYCRDRRPHESLLLVNEMKRLGLFPERDTYKSLIAAFCK 1041
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
AEE F+ + G D+ Y +M+ ++ S N K+ L + M G P A
Sbjct: 1042 ELMLEQAEELFESLRSEGHNLDRSFYHLMMKMYRSSGNHSKAEKLIEKMKESGIEPSDAT 1101
Query: 371 YEALI 385
L+
Sbjct: 1102 MHLLM 1106
>ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product
[Arabidopsis thaliana] gi|332642528|gb|AEE76049.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 1440
Score = 294 bits (752), Expect = 4e-77
Identities = 154/298 (51%), Positives = 205/298 (68%), Gaps = 4/298 (1%)
Frame = +2
Query: 5 QSYKEMQS-AGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICG 181
Q YK+M+ +GR+PDA+TYTVLIDSLGKAN+ EAA +MSEML+ G++PT++TYSALICG
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICG 482
Query: 182 YAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPD 361
YAKAG+R AE+TF CMLRSG KPD LAYSVMLDV +R T+K+ LY+DM+SDG+ P
Sbjct: 483 YAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPS 542
Query: 362 LAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
+YE +I L +++ ++K + IS++L K C D AA +LK+A
Sbjct: 543 YTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAIT 602
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEA 721
++ LLSIL SYS SGRHSEA ELL F+KE+A GS++LI EAL+V++C L A
Sbjct: 603 NGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSA 662
Query: 722 ALDEYNKN---NSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
ALDEY + + C GS+ M+E L+ C NE + EASQ++SD++L G E S V
Sbjct: 663 ALDEYFADPCVHGWCF--GSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESV 718
Score = 70.1 bits (170), Expect = 1e-09
Identities = 61/294 (20%), Positives = 122/294 (41%), Gaps = 9/294 (3%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQ 199
++++G PDA+TY L+ + + + + A V +M +P + TY+A+I Y + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 200 RALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYEA 379
A AE F + G PD + Y+ +L R +NT+K +YQ M G+ D Y
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 380 LIRLLAEDSNERCLKKVVXXXXXXXXXXXXRI--SAILTKAGCNDFAAEKLKLAAMKNSR 553
+I + + ++ I + ++ G A ++ AA+ +
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG---KANRTVEAAALMSEM 464
Query: 554 VDQG------NLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQL 715
+D G +++ Y+ +G+ EA + + + + + L ++ + +
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNET 524
Query: 716 EAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDM-KLYGIEP 874
A Y S S ++E +I+ + R + + DM +L G+ P
Sbjct: 525 RKAWGLYRDMIS-DGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Score = 67.0 bits (162), Expect = 9e-09
Identities = 42/143 (29%), Positives = 68/143 (47%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+ ++ G PD TY LI + + E +M +M N G+ P + TY +LI +
Sbjct: 948 QVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AE+ F+ +L G+K D+ Y M+ + S + K+ L Q M + G P L
Sbjct: 1008 GKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTL 1067
Query: 365 AMYEALIRLLAEDSNERCLKKVV 433
A L+ + N + +KV+
Sbjct: 1068 ATMHLLMVSYSSSGNPQEAEKVL 1090
Score = 59.7 bits (143), Expect = 1e-06
Identities = 63/297 (21%), Positives = 119/297 (40%), Gaps = 11/297 (3%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD +++ LI++ K+ + A +++ + N+G+RP TY+ L+ ++
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + F+ M +PD Y+ M+ V+ R ++ L+ ++ G+ PD Y
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 374 EALIRLLAEDSNERCLKKVV----XXXXXXXXXXXXRISAILTKAGCNDFAAEKLK-LAA 538
+L+ A + N +K+V I + K G D A + K +
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 539 MKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLE 718
+ D ++ S + R EA L++ + + AL+ Y A + E
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 719 AALDEYNKNNSLCMFKGST----AMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
A D ++ CM + T + ++ +A +Y DM G PS
Sbjct: 491 EAEDTFS-----CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPS 542
Score = 58.5 bits (140), Expect = 3e-06
Identities = 50/281 (17%), Positives = 122/281 (43%), Gaps = 9/281 (3%)
Frame = +2
Query: 56 YTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEETFDCML 235
YT +I++ GK +A V+ + +G P ++T+++L+ YA+ G A F+ M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 236 RSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYEALIRLLAEDSNER 415
R G P + +++L ++ V+ +++ G+ + ++ A N
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 416 CLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSRVDQGNLL------- 574
+KK+ R+ ++ + C ++++ A + S +++ N
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCK---GKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 575 SILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA--LDEYNKNN 748
S+L Y+ + + +++ +KE ++ L+++YC R+ E L + +N
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL 991
Query: 749 SLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIE 871
L ++ LI + + + +A Q++ ++ G++
Sbjct: 992 GL---DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLK 1029
>ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata
subsp. lyrata]
Length = 1429
Score = 294 bits (752), Expect = 4e-77
Identities = 155/297 (52%), Positives = 208/297 (70%), Gaps = 3/297 (1%)
Frame = +2
Query: 5 QSYKEMQS-AGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICG 181
Q YK+M+ +GR+PDA+TYTVLIDSLGKAN+ EAA +MSEML+ G++PT++TYSALICG
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICG 482
Query: 182 YAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPD 361
YAKAG+R AE+TF CMLRSG KPD LAYSVMLDV +R T+K+ VLY+DM+SDG+ P
Sbjct: 483 YAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPS 542
Query: 362 LAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
++YE +I L +++ ++K + IS++L K C D AA +LK+A
Sbjct: 543 HSLYELMILGLMKENRSDDVQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAIT 602
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEA 721
++ LLSIL SYS SGRHSEA ELL F+KE+A GS++LI EAL+V++C + A
Sbjct: 603 NGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLINEALIVLHCKVNNIGA 662
Query: 722 ALDEYNKNNSL--CMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
ALDEY + + F GST M+E L+ C NE + EASQ++S+++L G EPS V
Sbjct: 663 ALDEYLADPCVHGWCFGGST-MYETLLHCCVANEHYAEASQVFSELRLSGCEPSESV 718
Score = 72.0 bits (175), Expect = 3e-10
Identities = 61/294 (20%), Positives = 123/294 (41%), Gaps = 9/294 (3%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQ 199
++++G PDA+TY L+ + + + + A V +M +P + TY+A+I Y + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 200 RALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYEA 379
A AE F + G PD + Y+ +L R +NT+K +YQ M G+ D Y
Sbjct: 348 AAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 380 LIRLLAEDSNERCLKKVVXXXXXXXXXXXXRI--SAILTKAGCNDFAAEKLKLAAMKNSR 553
+I + + ++ I + ++ G A ++ AA+ +
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG---KANRSVEAAALMSEM 464
Query: 554 VDQG------NLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQL 715
+D G +++ Y+ +G+ EA + + + + + L ++ + +
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNET 524
Query: 716 EAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDM-KLYGIEP 874
A Y S S +++E +I+ + R + + DM +L G+ P
Sbjct: 525 RKAWVLYRDMIS-DGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEELCGMNP 577
Score = 68.9 bits (167), Expect = 2e-09
Identities = 42/143 (29%), Positives = 69/143 (48%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+ ++ +G PD TY LI + + E +M +M N G+ P + TY +LI +
Sbjct: 948 QVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAF 1007
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AE+ F+ +L G+K D+ Y M+ + S + K+ L Q M + G P L
Sbjct: 1008 GKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTL 1067
Query: 365 AMYEALIRLLAEDSNERCLKKVV 433
A L+ + N + +KV+
Sbjct: 1068 ATMHLLMVSYSSSGNPQEAEKVL 1090
Score = 67.0 bits (162), Expect = 9e-09
Identities = 52/246 (21%), Positives = 115/246 (46%), Gaps = 6/246 (2%)
Frame = +2
Query: 11 YKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAK 190
Y M++AG P Y ++I+ L K ++ +A ++SEM + + +++++ Y
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTV 939
Query: 191 AGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAM 370
+ + + SG++PD+ Y+ ++ ++ R + ++ L Q M + G P L
Sbjct: 940 IEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDT 999
Query: 371 YEALIRLLAE----DSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAA 538
Y++LI + + E+ ++++ + I +G +D AEKL L
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG-SDSKAEKL-LQM 1057
Query: 539 MKNSRVDQ--GNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQ 712
MKN+ ++ + ++ SYS SG EA ++L+ +K L +++ Y ++
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKD 1117
Query: 713 LEAALD 730
++ ++
Sbjct: 1118 YKSGIE 1123
Score = 57.4 bits (137), Expect = 7e-06
Identities = 62/297 (20%), Positives = 118/297 (39%), Gaps = 11/297 (3%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD +++ LI++ K+ + +++ + N+G+RP TY+ L+ ++
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + F+ M +PD Y+ M+ V+ R ++ L+ ++ G+ PD Y
Sbjct: 311 SNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTY 370
Query: 374 EALIRLLAEDSNERCLKKVV----XXXXXXXXXXXXRISAILTKAGCNDFAAEKLK-LAA 538
+L+ A + N +K+V I + K G D A + K +
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 539 MKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLE 718
+ D ++ S + R EA L++ + + AL+ Y A + E
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 719 AALDEYNKNNSLCMFKGST----AMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
A D ++ CM + T + ++ +A +Y DM G PS
Sbjct: 491 EAEDTFS-----CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPS 542
Score = 57.4 bits (137), Expect = 7e-06
Identities = 31/128 (24%), Positives = 62/128 (48%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q ++E+ S G D Y ++ + ++A ++ M N G+ PT+ T L+ Y
Sbjct: 1018 QLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSY 1077
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
+ +G AE+ + + ++ L YS ++D ++RSK+ K + +M +G PD
Sbjct: 1078 SSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLEPDH 1137
Query: 365 AMYEALIR 388
++ +R
Sbjct: 1138 RIWTCFVR 1145
>gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 294 bits (752), Expect = 4e-77
Identities = 154/298 (51%), Positives = 205/298 (68%), Gaps = 4/298 (1%)
Frame = +2
Query: 5 QSYKEMQS-AGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICG 181
Q YK+M+ +GR+PDA+TYTVLIDSLGKAN+ EAA +MSEML+ G++PT++TYSALICG
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICG 482
Query: 182 YAKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPD 361
YAKAG+R AE+TF CMLRSG KPD LAYSVMLDV +R T+K+ LY+DM+SDG+ P
Sbjct: 483 YAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPS 542
Query: 362 LAMYEALIRLLAEDSNERCLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAM 541
+YE +I L +++ ++K + IS++L K C D AA +LK+A
Sbjct: 543 YTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAIT 602
Query: 542 KNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEA 721
++ LLSIL SYS SGRHSEA ELL F+KE+A GS++LI EAL+V++C L A
Sbjct: 603 NGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSA 662
Query: 722 ALDEYNKN---NSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIEPSAKV 886
ALDEY + + C GS+ M+E L+ C NE + EASQ++SD++L G E S V
Sbjct: 663 ALDEYFADPCVHGWCF--GSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESV 718
Score = 70.1 bits (170), Expect = 1e-09
Identities = 61/294 (20%), Positives = 122/294 (41%), Gaps = 9/294 (3%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQ 199
++++G PDA+TY L+ + + + + A V +M +P + TY+A+I Y + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 200 RALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYEA 379
A AE F + G PD + Y+ +L R +NT+K +YQ M G+ D Y
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 380 LIRLLAEDSNERCLKKVVXXXXXXXXXXXXRI--SAILTKAGCNDFAAEKLKLAAMKNSR 553
+I + + ++ I + ++ G A ++ AA+ +
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG---KANRTVEAAALMSEM 464
Query: 554 VDQG------NLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQL 715
+D G +++ Y+ +G+ EA + + + + + L ++ + +
Sbjct: 465 LDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNET 524
Query: 716 EAALDEYNKNNSLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDM-KLYGIEP 874
A Y S S ++E +I+ + R + + DM +L G+ P
Sbjct: 525 RKAWGLYRDMIS-DGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Score = 67.0 bits (162), Expect = 9e-09
Identities = 42/143 (29%), Positives = 68/143 (47%)
Frame = +2
Query: 5 QSYKEMQSAGRHPDAVTYTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGY 184
Q Y+ ++ G PD TY LI + + E +M +M N G+ P + TY +LI +
Sbjct: 948 QVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Query: 185 AKAGQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDL 364
K AE+ F+ +L G+K D+ Y M+ + S + K+ L Q M + G P L
Sbjct: 1008 GKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTL 1067
Query: 365 AMYEALIRLLAEDSNERCLKKVV 433
A L+ + N + +KV+
Sbjct: 1068 ATMHLLMVSYSSSGNPQEAEKVL 1090
Score = 59.7 bits (143), Expect = 1e-06
Identities = 63/297 (21%), Positives = 119/297 (40%), Gaps = 11/297 (3%)
Frame = +2
Query: 20 MQSAGRHPDAVTYTVLIDSLGKANKMAE--AADVMSEMLNTGVRPTIRTYSALICGYAKA 193
M+ G PD +++ LI++ K+ + A +++ + N+G+RP TY+ L+ ++
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 194 GQRALAEETFDCMLRSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMY 373
A + F+ M +PD Y+ M+ V+ R ++ L+ ++ G+ PD Y
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 374 EALIRLLAEDSNERCLKKVV----XXXXXXXXXXXXRISAILTKAGCNDFAAEKLK-LAA 538
+L+ A + N +K+V I + K G D A + K +
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 539 MKNSRVDQGNLLSILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLE 718
+ D ++ S + R EA L++ + + AL+ Y A + E
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 719 AALDEYNKNNSLCMFKGST----AMFEYLIVSCAENERFVEASQIYSDMKLYGIEPS 877
A D ++ CM + T + ++ +A +Y DM G PS
Sbjct: 491 EAEDTFS-----CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPS 542
Score = 58.5 bits (140), Expect = 3e-06
Identities = 50/281 (17%), Positives = 122/281 (43%), Gaps = 9/281 (3%)
Frame = +2
Query: 56 YTVLIDSLGKANKMAEAADVMSEMLNTGVRPTIRTYSALICGYAKAGQRALAEETFDCML 235
YT +I++ GK +A V+ + +G P ++T+++L+ YA+ G A F+ M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 236 RSGIKPDKLAYSVMLDVHVRSKNTKKSVVLYQDMVSDGYVPDLAMYEALIRLLAEDSNER 415
R G P + +++L ++ V+ +++ G+ + ++ A N
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 416 CLKKVVXXXXXXXXXXXXRISAILTKAGCNDFAAEKLKLAAMKNSRVDQGNLL------- 574
+KK+ R+ ++ + C ++++ A + S +++ N
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCK---GKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 575 SILASYSLSGRHSEAIELLNFVKENAPGSEQLIAEALVVIYCNARQLEAA--LDEYNKNN 748
S+L Y+ + + +++ +KE ++ L+++YC R+ E L + +N
Sbjct: 932 SMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL 991
Query: 749 SLCMFKGSTAMFEYLIVSCAENERFVEASQIYSDMKLYGIE 871
L ++ LI + + + +A Q++ ++ G++
Sbjct: 992 GL---DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLK 1029