BLASTX nr result

ID: Mentha25_contig00038769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00038769
         (348 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37786.1| hypothetical protein MIMGU_mgv1a000855mg [Mimulus...   100   4e-19
gb|EPS63375.1| hypothetical protein M569_11410, partial [Genlise...    75   7e-12
ref|XP_006365090.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    59   7e-07
ref|XP_004230866.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    56   6e-06

>gb|EYU37786.1| hypothetical protein MIMGU_mgv1a000855mg [Mimulus guttatus]
          Length = 959

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 60/111 (54%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
 Frame = +2

Query: 26  MEEKRRDSAGFSPPTASAMEVSPSEQPTSRRRGG-LKRKXXXXXXXXXXXXXXXXXX--- 193
           ME+KRRD AG     +S  E  PSE PTSRRRGG  KRK                     
Sbjct: 1   MEDKRRDLAGIQSQPSSMAETPPSEPPTSRRRGGGQKRKSASINNSGGGGGSSTSQMTSS 60

Query: 194 KRQAREKPQSVSFIPIHMNGPCTRARLQPYNSSSLSEVALLKSEVEAREAA 346
           KRQAREK   V F PIHMNGP TRAR+QPYN++SLSEV+ +KSE E  EAA
Sbjct: 61  KRQAREKLPPVPFPPIHMNGPLTRARVQPYNTNSLSEVSAVKSEAEIGEAA 111


>gb|EPS63375.1| hypothetical protein M569_11410, partial [Genlisea aurea]
          Length = 743

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 52/119 (43%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
 Frame = +2

Query: 26  MEEKRRDSAGFSPP---TASAMEVSPSEQPTS-RRRGG--LKRKXXXXXXXXXXXXXXXX 187
           ME+KRRDSA   PP    A++ +V  +E P+S RRRGG   KRK                
Sbjct: 1   MEDKRRDSAEAQPPLQPAATSTDVPATENPSSSRRRGGGAAKRKSTFVNSSGSGSGGSST 60

Query: 188 XX------KRQAREKPQSVSFIPIHMNGPCTRARLQPYNSSSLSEVALLKSEVEAREAA 346
                   KRQAREKP +V F PIH NGPCTRAR+ P+  SS +  A  K E+E  ++A
Sbjct: 61  STPLTNSSKRQAREKPPAVPFPPIHTNGPCTRARVHPHGGSSTA--ASFKRELEVLDSA 117


>ref|XP_006365090.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Solanum tuberosum]
          Length = 945

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 42/103 (40%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
 Frame = +2

Query: 26  MEEKRRDSAGFSPPTA----SAMEVSPSEQPTSRRRGGLKRKXXXXXXXXXXXXXXXXXX 193
           MEEKR+D AG  PP A    ++ +V  +E PTSRRRGG  ++                  
Sbjct: 1   MEEKRKD-AGTPPPAADTPMTSADVPSAEAPTSRRRGGGHKRKASAIGSGASSTPPSTLS 59

Query: 194 KRQAREKPQSVSFIPIHMNGPCTRARLQPYNSSSLSEVALLKS 322
           KRQ   K  +V F PIH NGP TRAR QP N+++ +  A+  S
Sbjct: 60  KRQ---KQSAVPFPPIH-NGPLTRARQQPNNAAAAAASAVSPS 98


>ref|XP_004230866.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Solanum
           lycopersicum]
          Length = 945

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
 Frame = +2

Query: 26  MEEKRRDSAGFSPPTA----SAMEVSPSEQPTSRRRGGLKRKXXXXXXXXXXXXXXXXXX 193
           MEEKR+D+ G  PP A    ++ +V  +E PTSRRRGG  ++                  
Sbjct: 1   MEEKRKDT-GTPPPAADTPMTSADVPSAEAPTSRRRGGGNKRKASAIGSGASSTPPSTLS 59

Query: 194 KRQAREKPQSVSFIPIHMNGPCTRARLQPYNSSSLSEVA 310
           KRQ   K  +  F PIH NGP TRAR QP N+++ +  A
Sbjct: 60  KRQ---KQSAAPFPPIH-NGPLTRARQQPNNAAAAAASA 94


Top