BLASTX nr result
ID: Mentha25_contig00038565
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00038565
(1165 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 358 2e-96
emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera] 353 6e-95
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 343 8e-92
gb|AAB82754.1| retrofit [Oryza longistaminata] 343 1e-91
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 342 2e-91
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 341 4e-91
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 340 7e-91
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 338 2e-90
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 338 2e-90
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 336 1e-89
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 334 4e-89
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 332 1e-88
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 332 2e-88
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] 331 3e-88
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 331 3e-88
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 331 4e-88
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 331 4e-88
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi... 330 5e-88
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 330 5e-88
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 330 7e-88
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 358 bits (920), Expect = 2e-96
Identities = 183/346 (52%), Positives = 237/346 (68%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWYNKL LL GF+ S +D S+F + + VTG SSA V
Sbjct: 861 LKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVLILLIYVDDILVTGSSSAQVS 920
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
I LNS F L+ LG V+YFLGIEV +SG + L Q KY +LL ++ ML+ TP
Sbjct: 921 SFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPG 980
Query: 803 TSTTKLSKLDGNVFEDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSACK 624
LS LDG F D +LYRS +G LQYLTLTRPDI++ VNK QF+ +PTT+HW A K
Sbjct: 981 LLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVK 1040
Query: 623 RLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNAKK 444
R+LRYLKGT+S + +++L + GY DADWA C DD RSTGG+ +FLG NLV W++ K
Sbjct: 1041 RILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNK 1100
Query: 443 QDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPVFH 264
Q VV+RSSAESEYR+LA+ T++++W+Q + EL L +P +WCDN SA LAANPVFH
Sbjct: 1101 QKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFH 1160
Query: 263 ARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLAESRF 126
ARTKHI +D+H+IR++V + + Y+PSA+QVADIFTK ++ S+F
Sbjct: 1161 ARTKHIEMDLHFIRDHVLRKQLVIQYLPSAEQVADIFTKHISSSQF 1206
>emb|CAN76473.1| hypothetical protein VITISV_016007 [Vitis vinifera]
Length = 1002
Score = 353 bits (907), Expect = 6e-95
Identities = 183/346 (52%), Positives = 230/346 (66%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPR W++KL+ L GF STSD SLF NGN +TG++ V
Sbjct: 641 LKQAPRVWFHKLREALHTWGFISSTSDTSLFIYKHNGNFLLLLVYVDDLLITGNNVPLVQ 700
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+IQ L ++F LK LG V FLG E ++ G L Q KY +LL K+KM TPM
Sbjct: 701 TLIQDLQNRFALKDLGLVKDFLGFEALRTTTGLHLTQSKYTTDLLIKTKMHSAKPVPTPM 760
Query: 803 TSTTKLSKLDGNVFEDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSACK 624
++ KL G F DP+LYRS IG LQYLT TRPDIA+ VNKLSQ+LQ PT HW+ACK
Sbjct: 761 SAALKLHAASGPAFSDPTLYRSTIGALQYLTYTRPDIAFAVNKLSQYLQQPTELHWTACK 820
Query: 623 RLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNAKK 444
R+LRYLKG + L F P S+L ++ Y DADWA IDD RST G+CVFLG NL W+++K
Sbjct: 821 RVLRYLKGIVHRGLHFTPASSLHLQVYTDADWASSIDDRRSTTGYCVFLGTNLFTWSSRK 880
Query: 443 QDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPVFH 264
Q VVARSS ++EYR+LA+ + +V WL++L +ELG+ + +WCDN A ALAANPVFH
Sbjct: 881 QPVVARSSTKAEYRALAHASXEVAWLRSLFSELGISLVNTPVIWCDNQGAGALAANPVFH 940
Query: 263 ARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLAESRF 126
+RTKHI VDV Y+RE V + + V YVPS +Q AD+FTKPL+ RF
Sbjct: 941 SRTKHIEVDVXYVREQVLDKKLVVSYVPSVEQXADLFTKPLSIPRF 986
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 343 bits (880), Expect = 8e-92
Identities = 171/346 (49%), Positives = 231/346 (66%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAW+ KL LL GF + SD SLF + + V G +AA+
Sbjct: 1086 LKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDTAAIT 1145
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+I LNS+F LK LGEVHYFLGI+V + G L Q KYI +LL+K+KM+ C TP+
Sbjct: 1146 SLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPARTPL 1205
Query: 803 TSTTKLSKLDGNVFEDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSACK 624
+ KL DG+ ED YRS +G LQY+T+TRP+++++VNK+ QF+Q+PT HW K
Sbjct: 1206 PTGLKLRVGDGDPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHWKVVK 1265
Query: 623 RLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNAKK 444
R+LRYL+GT+ L +S L + G+ DADWA +DD RST GHCVFLG NL+ W +KK
Sbjct: 1266 RILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLISWQSKK 1325
Query: 443 QDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPVFH 264
Q +V+RSS E EYRSLA L ++ WL++L +EL L + P VWCDN S + L+ANPV H
Sbjct: 1326 QHIVSRSSIEIEYRSLAGLVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPVLH 1385
Query: 263 ARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLAESRF 126
ARTKHI +D++++RE V V+V +VPSADQ+AD+ TK ++ ++F
Sbjct: 1386 ARTKHIELDLYFVREKVIRKEVEVRHVPSADQLADVLTKTVSSTQF 1431
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 343 bits (879), Expect = 1e-91
Identities = 172/344 (50%), Positives = 232/344 (67%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L+E+GF+ S +D SLF+ + G V + A
Sbjct: 1086 LKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTEKATT 1145
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+++ LN +F LK LG++HYFLGIEV K G L Q+KY ++LL++ M C +TP+
Sbjct: 1146 ALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPVSTPL 1205
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+ + KL+ +G+ D YRS++G LQYLTLTRPDIAY+VNK+ QFL +PTTSHW A
Sbjct: 1206 SVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIA 1265
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRYL SL L +++ + GY DADWAG IDD +STGG VFLG NLV W+A
Sbjct: 1266 VKRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSA 1325
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY+++AN T +++W+Q L ELG+E K+WCDN A L+ANPV
Sbjct: 1326 RKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPV 1385
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHARTKHI VD H++RE V ++++ +VPS DQVAD FTK L+
Sbjct: 1386 FHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALS 1429
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 342 bits (876), Expect = 2e-91
Identities = 168/344 (48%), Positives = 233/344 (67%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L+E+GF+ S +D SLF+ + G + + A
Sbjct: 1077 LKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTEKATT 1136
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+++ LN +F LK LG++HYFLGIEV K G L Q+KY ++LL++ M C +TP+
Sbjct: 1137 ALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPL 1196
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+ + KL+ +G+ D + YRS++G LQYLTLTRPDIAY+VNK+ QFL +PTT HW+A
Sbjct: 1197 SVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTDHWTA 1256
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRYL SL L +++ + GY DADWAG +DD +STGG VFLG NLV W+A
Sbjct: 1257 VKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLVSWSA 1316
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY+++AN T +++W+Q L ELG++ K+WCDN A L+ANPV
Sbjct: 1317 RKQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAKYLSANPV 1376
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHARTKHI VD H++RE V ++++ +VPS DQVAD FTK L+
Sbjct: 1377 FHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALS 1420
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 341 bits (874), Expect = 4e-91
Identities = 170/344 (49%), Positives = 231/344 (67%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L E+GFK S SD SLF+ S V S A +
Sbjct: 1071 LKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVAMFMLVYVDDIIVASSSIDATN 1130
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+++ LN +F LK LG +HYFLGIEV + G L Q+KY ++L++ M +C TP+
Sbjct: 1131 ALLKNLNQEFALKDLGRLHYFLGIEVKEVNNGIVLTQEKYAMDVLKRVNMSDCKAVNTPL 1190
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+ + KLS +GN F ED + YRS++G LQYLTLTRPD++++VNK+ Q+L +PTT HW+A
Sbjct: 1191 SISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAA 1250
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRYLK T+ L L +++L + + DADWAGC+DD STGG VF+G NLV W+A
Sbjct: 1251 AKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVSWSA 1310
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY++LAN+T +++W+Q L ELG++ KVWCDN A + ANPV
Sbjct: 1311 RKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTANPV 1370
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHARTKHI VD H++RE V + V Y+ + DQVAD FTK L+
Sbjct: 1371 FHARTKHIEVDYHFVRERVARKFLQVEYISTKDQVADGFTKTLS 1414
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 340 bits (872), Expect = 7e-91
Identities = 173/344 (50%), Positives = 230/344 (66%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAW+++L L+++GFK S D SLF+ + V S A
Sbjct: 1094 LKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLVYVDDIIVASSSEKATA 1153
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
++Q L +F LK LGE+HYFLGIEV K G L Q KY ++LL+K M++C TP+
Sbjct: 1154 ALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPANTPL 1213
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+ + KLS +G++ ED S YRSV+G LQYLTLTRPDIA++VNK+ QFL +PTT HW A
Sbjct: 1214 SVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTVHWIA 1273
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRYLK L L + + + G+ DADWAGC+DD RSTGG +FLG NLV WNA
Sbjct: 1274 VKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLVSWNA 1333
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS ESEY+++AN T +++W+Q L EL ++ K+WCDN A L+ANPV
Sbjct: 1334 RKQATVSRSSTESEYKAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAKYLSANPV 1393
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHARTKHI VD H++RE V ++++ +V + DQVAD FTKPL+
Sbjct: 1394 FHARTKHIEVDYHFVRERVSQKLLEIDFVSTNDQVADGFTKPLS 1437
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 338 bits (868), Expect = 2e-90
Identities = 170/344 (49%), Positives = 230/344 (66%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L E+GFK S SD SLF+ S V S A +
Sbjct: 671 LKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVTIFMLVYVDDIIVASSSIVATN 730
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+++ LN +F LK LG +HYFLGIEV + G L Q+KY ++L++ M +C TP+
Sbjct: 731 ALLKNLNQEFALKDLGRLHYFLGIEVKEVNDGIVLTQEKYAMDVLKRVNMSDCKAVNTPL 790
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+ + KLS +GN ED + YRS++G LQYLTLTRPD++++VNK+ Q+L + TT HW A
Sbjct: 791 SISEKLSAHEGNPLGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAATTKHWVA 850
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRYLK T+ L L +++L + + DADWAGC+DD RSTGG VF+G NLV W+A
Sbjct: 851 AKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSA 910
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY++LAN T +++W+Q L ELG++V KVWCDN A + ANPV
Sbjct: 911 RKQATVSRSSTEAEYKALANATAEIMWIQTLLHELGIQVPKIAKVWCDNIGAKYMTANPV 970
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHARTKHI VD H++RE V ++ V Y+ + DQVAD FTK L+
Sbjct: 971 FHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVADGFTKTLS 1014
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 338 bits (868), Expect = 2e-90
Identities = 169/343 (49%), Positives = 233/343 (67%), Gaps = 1/343 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAW++KLK+ L + GF + SD SLF + N + VTG SS +H
Sbjct: 898 LKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEIH 957
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSG-AGYALCQKKYIHELLEKSKMLECNVCATP 807
++I L F LK LGE+ YFLGIEV K+ G L QKKYI +LL+K+KM TP
Sbjct: 958 ELISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPTP 1017
Query: 806 MTSTTKLSKLDGNVFEDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSAC 627
M S KLS G+ ++ YRSV+G LQY+T+TRP+IA++VNK+ QF+Q P +HW A
Sbjct: 1018 MLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLDTHWKAV 1077
Query: 626 KRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNAK 447
KR+LRYL GT L + P+ + + G+ DADW +DD RST GHCVFLG +LV W++K
Sbjct: 1078 KRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSLVSWSSK 1137
Query: 446 KQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPVF 267
KQ +RSS E+EYRSLA+LT++++WLQ+L +EL ++ +WCDN S ++L+ANPV
Sbjct: 1138 KQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVL 1197
Query: 266 HARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
H+RTKH+ +D++++RE V + V +VP+ DQVAD+FTKPL+
Sbjct: 1198 HSRTKHMELDLYFVREKVMERKLVVNHVPTEDQVADVFTKPLS 1240
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 336 bits (862), Expect = 1e-89
Identities = 170/344 (49%), Positives = 230/344 (66%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L ++GF+ S +D SLF+ + VT AV
Sbjct: 888 LKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVLIYVDDIIVTSSRQEAVP 947
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+++ L +F LK LG++HYFLGIEV K G L Q KY+++LL + M +C +TP+
Sbjct: 948 ALLRDLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPVSTPL 1007
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+++ KLS +G+ D + YRSV+G LQYLTLTRPDIA+ VNK+ QFL +PTT HW+A
Sbjct: 1008 STSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAA 1067
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRYLK L L + ++ + Y DADWAG +DD RSTGG VFLG NLV W+A
Sbjct: 1068 VKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWSA 1127
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS ESEY++LAN T +++W+Q L EL +E + K+WCDN A L+ANPV
Sbjct: 1128 RKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAKYLSANPV 1187
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHARTKHI VD H++RE V ++++ +VP+ DQVAD FTK L+
Sbjct: 1188 FHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQVADGFTKALS 1231
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 334 bits (857), Expect = 4e-89
Identities = 168/344 (48%), Positives = 231/344 (67%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L E+GF+ S +D SLF+ + G V + A
Sbjct: 1089 LKQAPRAWYSRLSKKLTELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTEKATT 1148
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+++ LN +F LK LG++HYFLGIEV K G L Q+KY +++L++ M C +TP+
Sbjct: 1149 ALLKDLNKEFTLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCKPVSTPL 1208
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+ + KL+ +G+ D + YRS++G LQYLTLTRPDIAY+VNK+ QFL +PTTSHW A
Sbjct: 1209 SVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIA 1268
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRYL SL L +++ + GY DAD AG IDD +STGG VFLG NLV W+A
Sbjct: 1269 VKRILRYLNQCTSLGLHVHKSASTLVHGYSDADGAGSIDDRKSTGGFAVFLGSNLVSWSA 1328
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY+++AN T +++W+Q + ELG+E K+WCDN A L+ANPV
Sbjct: 1329 RKQPTVSRSSTEAEYKAVANTTAELIWVQTVLKELGIESPKAAKIWCDNLGAKYLSANPV 1388
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHA+TKHI VD H++RE V ++++ +VPS DQVAD FTK L+
Sbjct: 1389 FHAKTKHIHVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALS 1432
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 332 bits (852), Expect = 1e-88
Identities = 172/346 (49%), Positives = 226/346 (65%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAW+ KL++ LL+ GF+ S +D SLF + VTG + V
Sbjct: 1008 LKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVS 1067
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
I L +KF L+ LG + YFLGI+ + G+ L Q KYI +LL +++M TP
Sbjct: 1068 HFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPG 1127
Query: 803 TSTTKLSKLDGNVFEDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSACK 624
LS+ DG DPS YR +G LQY+TLTRPDIA+ VNK QF+ P+ HW A K
Sbjct: 1128 RLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVK 1187
Query: 623 RLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNAKK 444
R+LRYLKGTI L L F P +++ ++GY DADWA C DD RST G+CVFLG NL+ W++ K
Sbjct: 1188 RILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSK 1247
Query: 443 QDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPVFH 264
Q +V++SSAESEYR L +LT ++VW+Q+L EL L +P +WCDN SA LAANPVFH
Sbjct: 1248 QRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPT-SPPILWCDNQSAAHLAANPVFH 1306
Query: 263 ARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLAESRF 126
+R+KHI +D+H+IRE V + + YVPS DQ+ADIFTK L ++F
Sbjct: 1307 SRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQF 1352
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 332 bits (850), Expect = 2e-88
Identities = 167/344 (48%), Positives = 230/344 (66%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L E+GF+ S +D SLF+ + G V + A
Sbjct: 1089 LKQAPRAWYSRLSKKLTELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIVASSTEKATT 1148
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+++ LN +F LK LG++HYFLGIEV K G L Q+KY +++L++ M C +TP+
Sbjct: 1149 ALLKDLNKEFTLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRVNMSNCTPVSTPL 1208
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+ + KL+ +G+ D + YRS++G LQYLTLTRPDIAY+VNK+ QFL +PTTSHW A
Sbjct: 1209 SVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIA 1268
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRYL S L +++ + GY DAD AG IDD +STGG VFLG NLV W+A
Sbjct: 1269 VKRILRYLNQCTSPGLHVHKSASTLVHGYSDADGAGSIDDRKSTGGFAVFLGSNLVSWSA 1328
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY+++AN T +++W+Q + ELG+E K+WCDN A L+ANPV
Sbjct: 1329 RKQPTVSRSSTEAEYKAVANTTAELIWVQTVLKELGIESPKAAKIWCDNLGAKYLSANPV 1388
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHA+TKHI VD H++RE V ++++ +VPS DQVAD FTK L+
Sbjct: 1389 FHAKTKHIHVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALS 1432
>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
Length = 773
Score = 331 bits (849), Expect = 3e-88
Identities = 172/346 (49%), Positives = 225/346 (65%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAW+ KL++ LL+ GF+ S +D SLF + VTG + V
Sbjct: 355 LKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGSNPTLVS 414
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
I L +KF L+ LG + YFLGI+ + G+ L Q KYI +LL +++M TP
Sbjct: 415 HFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPG 474
Query: 803 TSTTKLSKLDGNVFEDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSACK 624
LS+ DG DPS YR +G LQY+TLTRPDIA+ VNK QF+ P+ HW A K
Sbjct: 475 RLGRTLSQSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVNKACQFMAKPSDVHWMAVK 534
Query: 623 RLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNAKK 444
R+LRYLKGTI L L F P +++ +GY DADWA C DD RST G+CVFLG NL+ W++ K
Sbjct: 535 RILRYLKGTIHLGLHFQPAASMEXQGYSDADWASCPDDRRSTSGYCVFLGSNLISWSSSK 594
Query: 443 QDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPVFH 264
Q +V++SSAESEYR L +LT ++VW+Q+L EL L +P +WCDN SA LAANPVFH
Sbjct: 595 QRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPT-SPPILWCDNQSAAHLAANPVFH 653
Query: 263 ARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLAESRF 126
+R+KHI +D+H+IRE V + + YVPS DQ+ADIFTK L ++F
Sbjct: 654 SRSKHIELDLHFIREKVLRQELQICYVPSGDQLADIFTKHLPITQF 699
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 331 bits (849), Expect = 3e-88
Identities = 169/344 (49%), Positives = 227/344 (65%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY KL L +GF+ S +D SLF+ + G V AV
Sbjct: 897 LKQAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAVP 956
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+++ L F LK LG++HYFLGIEV K+ +G L Q+KY+ +LL + M +C +TP+
Sbjct: 957 ALLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPL 1016
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+++ KL+ +G++ D S YRSV+G LQYLTLTRPDI + VNK+ QFL +PT HW+A
Sbjct: 1017 STSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQFLHAPTIVHWAA 1076
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRYLK L L + ++ + GY DADWAG IDD RSTGG VFLG NLV WNA
Sbjct: 1077 MKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLVSWNA 1136
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
KKQ V RSS ESEY++LAN T +++W+Q L EL + ++WCDN A L++NPV
Sbjct: 1137 KKQATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSPPMARLWCDNLGAKYLSSNPV 1196
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHARTKHI VD H++RE ++ +++V ++P+ DQVAD FTK L+
Sbjct: 1197 FHARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQVADGFTKALS 1240
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 331 bits (848), Expect = 4e-88
Identities = 166/343 (48%), Positives = 227/343 (66%), Gaps = 2/343 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L E+GF S +D SLF+ + A
Sbjct: 456 LKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMASSVPDATS 515
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
++Q L+ F LK LG++HYFLGIEV K G L Q+KY +LL + M EC +TP+
Sbjct: 516 TLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPL 575
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+++ KLS +G + +D + YRSV+G LQYLTLTRPDI++++NK+ QFL +PTT+HW+A
Sbjct: 576 STSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAA 635
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRY+K T+ L F +L + G+ DADWAG DD RSTGG VFLG NLV W+A
Sbjct: 636 VKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSA 695
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY++LAN T +++W+Q L ELG+E K+WCDN A L+ANP+
Sbjct: 696 RKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPI 755
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPL 141
FHARTKHI VD H++RE V ++++ Y+ + DQVAD FTK +
Sbjct: 756 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI 798
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 331 bits (848), Expect = 4e-88
Identities = 165/343 (48%), Positives = 227/343 (66%), Gaps = 2/343 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L E+GF S +D SLF+ + G V S+ V
Sbjct: 575 LKQAPRAWYSRLSTKLQELGFISSKADTSLFFYNKGGCTIFILVYVDDIIVASSSAEVVA 634
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
+++ L F LK LG++HYFLGIEV K G L Q Y ++L+++ M C +TP+
Sbjct: 635 ALLKDLEKDFALKDLGDLHYFLGIEVKKVSQGLVLSQAWYASDILKRAGMSICKPASTPL 694
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
++T KLS DG+ D S YRS++G LQYLTLTR D+++ VNK+ QFL SPTT HWSA
Sbjct: 695 STTEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTVHWSA 754
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRY+KGT+ L FG + ++ + + DADWAGC DD RSTGG VFLG NL+ W+A
Sbjct: 755 VKRILRYIKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGPNLISWSA 814
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY++LAN TT+V W++ + EL + + ++WCDN A L+ANPV
Sbjct: 815 RKQATVSRSSTEAEYKALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPV 874
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPL 141
FHARTKHI +D H++RE V ++D+ ++ + DQ+AD FTK L
Sbjct: 875 FHARTKHIEIDYHFVREQVAKKLLDIQFISTTDQLADGFTKSL 917
>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
Length = 391
Score = 330 bits (847), Expect = 5e-88
Identities = 167/343 (48%), Positives = 227/343 (66%), Gaps = 2/343 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L E+GF S +D SLF+ V A
Sbjct: 26 LKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPDATS 85
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
++Q L+ F LK LG++HYFLGIEV K G L Q+KY +LL + M EC +TP+
Sbjct: 86 TLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPL 145
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+++ KLS +G + +D + YRSV+G LQYLTLTRPDI++++NK+ QFL +PTT+HW+A
Sbjct: 146 STSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAA 205
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRY+K T+ L F +L + G+ DADWAG DD RSTGG VFLG NLV W+A
Sbjct: 206 VKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSA 265
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY++LAN T +++W+Q L ELG+E K+WCDN A L+ANP+
Sbjct: 266 RKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPI 325
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPL 141
FHARTKHI VD H++RE V ++++ Y+ + DQVAD FTK +
Sbjct: 326 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI 368
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 330 bits (847), Expect = 5e-88
Identities = 167/343 (48%), Positives = 227/343 (66%), Gaps = 2/343 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L L E+GF S +D SLF+ V A
Sbjct: 1034 LKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVPDATS 1093
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
++Q L+ F LK LG++HYFLGIEV K G L Q+KY +LL + M EC +TP+
Sbjct: 1094 TLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPL 1153
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+++ KLS +G + +D + YRSV+G LQYLTLTRPDI++++NK+ QFL +PTT+HW+A
Sbjct: 1154 STSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAA 1213
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRY+K T+ L F +L + G+ DADWAG DD RSTGG VFLG NLV W+A
Sbjct: 1214 VKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSA 1273
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS E+EY++LAN T +++W+Q L ELG+E K+WCDN A L+ANP+
Sbjct: 1274 RKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPI 1333
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPL 141
FHARTKHI VD H++RE V ++++ Y+ + DQVAD FTK +
Sbjct: 1334 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI 1376
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 330 bits (846), Expect = 7e-88
Identities = 166/344 (48%), Positives = 231/344 (67%), Gaps = 2/344 (0%)
Frame = -3
Query: 1163 LKQAPRAWYNKLKVCLLEIGFKRSTSDFSLFYKSANGNXXXXXXXXXXXXVTGDSSAAVH 984
LKQAPRAWY++L LL +GF+ S +D SLF+ + V + A
Sbjct: 954 LKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTHKATE 1013
Query: 983 DVIQVLNSKFKLKTLGEVHYFLGIEVFKSGAGYALCQKKYIHELLEKSKMLECNVCATPM 804
++ LN +F LK LG+++YFLGIEV K G L Q KY +LL+K M +C +TP+
Sbjct: 1014 ALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPL 1073
Query: 803 TSTTKLSKLDGNVF--EDPSLYRSVIGKLQYLTLTRPDIAYTVNKLSQFLQSPTTSHWSA 630
+++ KLS +G+ +D + YRS++G LQYLTLTRPDIA++VNK+ QFL +PTT HW+A
Sbjct: 1074 STSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAA 1133
Query: 629 CKRLLRYLKGTISLSLCFGPTSALTMEGYPDADWAGCIDDSRSTGGHCVFLGGNLVVWNA 450
KR+LRY+K +L L + + + + DADWAG +DD +STGG VFLG NLV W+A
Sbjct: 1134 VKRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSA 1193
Query: 449 KKQDVVARSSAESEYRSLANLTTDVVWLQNLSTELGLEVRAPHKVWCDNSSAIALAANPV 270
+KQ V+RSS ESEY++LAN T +++W+Q L TE+ ++ K+WCDN A L+ANP+
Sbjct: 1194 RKQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPI 1253
Query: 269 FHARTKHIAVDVHYIRENVENGVVDVGYVPSADQVADIFTKPLA 138
FHARTKHI VD H++R+ V ++D+ YVP+ DQVAD FTKPL+
Sbjct: 1254 FHARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTKPLS 1297