BLASTX nr result

ID: Mentha25_contig00038074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00038074
         (310 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590762.1| hypothetical protein MTR_1g074970 [Medicago ...    40   8e-07
ref|XP_003625865.1| hypothetical protein MTR_7g108140 [Medicago ...    41   2e-06
ref|XP_003614519.1| Cyst nematode resistance protein-like protei...    42   4e-06
ref|XP_003590199.1| Pentatricopeptide repeat-containing protein ...    40   6e-06

>ref|XP_003590762.1| hypothetical protein MTR_1g074970 [Medicago truncatula]
           gi|355479810|gb|AES61013.1| hypothetical protein
           MTR_1g074970 [Medicago truncatula]
          Length = 153

 Score = 40.4 bits (93), Expect(2) = 8e-07
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 305 RESAIHVFLECGEVPHLWSCLTSWIGVDWVAPNSVAGHLLSFVA 174
           +E+A H+FL C     +W+ +  W+G   VAP  V  H   F+A
Sbjct: 31  QETANHLFLHCSLFGSMWNDILHWVGTSMVAPFDVKDHFTQFIA 74



 Score = 38.1 bits (87), Expect(2) = 8e-07
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -2

Query: 123 TIWVLWKSRNEKFFAAKPWDGRRILDEIKRRFWSW 19
           T+W +WK RN + F  K     RI+D+IK   +SW
Sbjct: 93  TVWEIWKERNNRIFKVKECSIMRIVDKIKSLSFSW 127


>ref|XP_003625865.1| hypothetical protein MTR_7g108140 [Medicago truncatula]
           gi|355500880|gb|AES82083.1| hypothetical protein
           MTR_7g108140 [Medicago truncatula]
          Length = 238

 Score = 40.8 bits (94), Expect(2) = 2e-06
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = -3

Query: 302 ESAIHVFLECGEVPHLWSCLTSWIGVDWVAPNSVAGHL---LSFVAFSRVRNG 153
           ESAIH+F+ C  V  LW  + +W+ ++++ P S+  HL    + V+  ++R G
Sbjct: 119 ESAIHLFIHCEFVAKLWVMVLNWVNLNFITPPSLTTHLDCWFNEVSSKKMRKG 171



 Score = 36.6 bits (83), Expect(2) = 2e-06
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -2

Query: 123 TIWVLWKSRNEKFFAAKPWDGRRILDEIKRRFWSWCAVRRE 1
           TI ++W  RN++ F     D   I D +K   W WC  R E
Sbjct: 179 TILIIWLERNDRIFKGAKKDVGEIFDAVKTLSWCWCRNRLE 219


>ref|XP_003614519.1| Cyst nematode resistance protein-like protein [Medicago truncatula]
           gi|355515854|gb|AES97477.1| Cyst nematode resistance
           protein-like protein [Medicago truncatula]
          Length = 130

 Score = 41.6 bits (96), Expect(2) = 4e-06
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -3

Query: 302 ESAIHVFLECGEVPHLWSCLTSWIGVDWVAPNSVAGHLLSFVAFSRVRNGR 150
           E A H+FL C     LW  ++ W+G   V P +V  HL  F  FS   N +
Sbjct: 8   EDAKHLFLSCDFFGKLWYDISYWLGYQLVFPENVLDHLYQFATFSGFSNSK 58



 Score = 34.7 bits (78), Expect(2) = 4e-06
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 120 IWVLWKSRNEKFFAAKPWDGRRILDEIKRRFWSWCAVRR 4
           +WV+W  RN + F  K     ++LD++K + + W  V R
Sbjct: 70  VWVIWLERNARIFHQKEASFNQLLDKVKLQSYWWLKVNR 108


>ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479247|gb|AES60450.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 834

 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -3

Query: 308 VRESAIHVFLECGEVPHLWSCLTSWIGVDWVAPNSVAGHLLSFVAFSRVR-NGRGDW 141
           V ES IH+FL C  +  +W  + SW+GV+++ P +    L   +A +R + + +G W
Sbjct: 606 VEESTIHLFLHCQVISQVWGKIWSWLGVEFLVPPNSFIQLECLLAGARYKLSKKGFW 662



 Score = 35.0 bits (79), Expect(2) = 6e-06
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 123 TIWVLWKSRNEKFFAAKPWDGRRILDEIKRRFWSW 19
           +IWV+W + N K F  K ++   I++E++   W W
Sbjct: 668 SIWVIWNTLNRKIFKNKDFEVNLIVEEVEVLSWKW 702


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