BLASTX nr result

ID: Mentha25_contig00037650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00037650
         (309 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_007041957.1| Pentatricopeptide repeat-containing protein,...    58   1e-06

>ref|XP_006494588.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 923

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 GSNLTAQNVILPLEKLGGERSLRYYNHVFLSKKKDSRNQKG-SRKVEKKSLHSDTAKNLP 131
           G  L+ Q  +   E + G+  L  +      K K  R  +   R  E+ +L  D  KN+ 
Sbjct: 309 GPELSLQEALQTAEHVEGKIRLACHREGPSHKIKARRRIRNFPRNNERINLMQDVGKNML 368

Query: 130 PTSDPEQKHEDSKHNPPWQLRVYNQLLREGRLNDCIELLEDME 2
               P  KH +  H+   QL  YN+L+R+GR++DCI+LLEDME
Sbjct: 369 QFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDME 411


>ref|XP_006494587.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 1072

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = -3

Query: 307 GSNLTAQNVILPLEKLGGERSLRYYNHVFLSKKKDSRNQKG-SRKVEKKSLHSDTAKNLP 131
           G  L+ Q  +   E + G+  L  +      K K  R  +   R  E+ +L  D  KN+ 
Sbjct: 309 GPELSLQEALQTAEHVEGKIRLACHREGPSHKIKARRRIRNFPRNNERINLMQDVGKNML 368

Query: 130 PTSDPEQKHEDSKHNPPWQLRVYNQLLREGRLNDCIELLEDME 2
               P  KH +  H+   QL  YN+L+R+GR++DCI+LLEDME
Sbjct: 369 QFPYPNGKHANYAHDVSEQLHSYNRLIRQGRISDCIDLLEDME 411


>ref|XP_007041957.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508705892|gb|EOX97788.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 1110

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
 Frame = -3

Query: 304 SNLTAQNVILPLEKLGGERSLRYYNHVFLSKKKD-SRNQKGSRKVEKKSLHSDTAKN--L 134
           + L+++N +   +   G+ +    N V   K++D  R ++  R  +K   HS   KN  L
Sbjct: 346 AQLSSKNCLQTADMAEGKVAQACSNRVSSHKRQDFGRGREIPR--DKGKRHSIQEKNTKL 403

Query: 133 PPTSDPEQKHEDSKHNPPWQLRVYNQLLREGRLNDCIELLEDME 2
           P    P     D+KH P    R YN+LLR+GRL+DC++LLEDME
Sbjct: 404 PKFPFPNGMLADNKHRPEDHFRSYNRLLRDGRLSDCVDLLEDME 447


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