BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00037613
         (839 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus...   397   e-108
gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus...   397   e-108
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor...   318   2e-84
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...   316   6e-84
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   316   6e-84
ref|XP_002301949.1| pseudouridine synthase family protein [Popul...   315   2e-83
ref|XP_007017900.1| Pseudouridine synthase family protein isofor...   311   3e-82
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   308   2e-81
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   308   2e-81
ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phas...   306   8e-81
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr...   305   2e-80
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr...   305   2e-80
gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]       305   2e-80
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   304   2e-80
ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor...   303   5e-80
ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl...   303   5e-80
ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chl...   298   1e-78
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]           298   2e-78
ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phas...   297   3e-78
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   294   3e-77

>gb|EYU17563.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
          Length = 422

 Score =  397 bits (1019), Expect = e-108
 Identities = 204/281 (72%), Positives = 231/281 (82%), Gaps = 2/281 (0%)
 Frame = +3

Query: 3   SLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAANSASDGFNESSSGRPNNYSGV 182
           SLQSL+WSS+KP  INPR+P    L +T+ AY +SIPA  S SD   +S SGRPNN+SG 
Sbjct: 3   SLQSLNWSSIKPFPINPRNPAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNNFSGH 62

Query: 183 KIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMV 362
           KIEE V LD  KLR+DSWI+SRINGISRARVQSSIRSGLVSVNG VI+K SH+VR GD V
Sbjct: 63  KIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGDSV 122

Query: 363 DCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRL 542
           +CTIAELQPLRAEPE+IPLDIVYED++++VVNKPAHMVVHPAPGNA GTLVNGILHHCRL
Sbjct: 123 NCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHCRL 182

Query: 543 STVCFSPDSLPET--DDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSGL 716
           STVCF+P+SLP+   DDDS DE +                SE+SVRPGIVHRLDKGTSGL
Sbjct: 183 STVCFNPESLPDNIDDDDSIDEATVFP-------------SESSVRPGIVHRLDKGTSGL 229

Query: 717 LVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
           LVVAKDE SHSHL+EQFKK T+KRVY+SLTCGVP P+SGRV
Sbjct: 230 LVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRV 270


>gb|EYU17562.1| hypothetical protein MIMGU_mgv1a006781mg [Mimulus guttatus]
          Length = 432

 Score =  397 bits (1019), Expect = e-108
 Identities = 204/281 (72%), Positives = 231/281 (82%), Gaps = 2/281 (0%)
 Frame = +3

Query: 3   SLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAANSASDGFNESSSGRPNNYSGV 182
           SLQSL+WSS+KP  INPR+P    L +T+ AY +SIPA  S SD   +S SGRPNN+SG 
Sbjct: 3   SLQSLNWSSIKPFPINPRNPAFWRLLSTSSAYPDSIPADYSDSDDSQDSISGRPNNFSGH 62

Query: 183 KIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMV 362
           KIEE V LD  KLR+DSWI+SRINGISRARVQSSIRSGLVSVNG VI+K SH+VR GD V
Sbjct: 63  KIEETVALDSAKLRVDSWISSRINGISRARVQSSIRSGLVSVNGHVISKVSHVVRDGDSV 122

Query: 363 DCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRL 542
           +CTIAELQPLRAEPE+IPLDIVYED++++VVNKPAHMVVHPAPGNA GTLVNGILHHCRL
Sbjct: 123 NCTIAELQPLRAEPENIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNGILHHCRL 182

Query: 543 STVCFSPDSLPET--DDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSGL 716
           STVCF+P+SLP+   DDDS DE +                SE+SVRPGIVHRLDKGTSGL
Sbjct: 183 STVCFNPESLPDNIDDDDSIDEATVFP-------------SESSVRPGIVHRLDKGTSGL 229

Query: 717 LVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
           LVVAKDE SHSHL+EQFKK T+KRVY+SLTCGVP P+SGRV
Sbjct: 230 LVVAKDEHSHSHLAEQFKKHTVKRVYVSLTCGVPSPVSGRV 270


>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
           lycopersicum]
          Length = 436

 Score =  318 bits (815), Expect = 2e-84
 Identities = 163/241 (67%), Positives = 196/241 (81%), Gaps = 1/241 (0%)
 Frame = +3

Query: 120 NSASDGFNESSSGRPNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGL 299
           +S SD   +   GR +NYSGVK+EE V+   GKLRLDSW++SRI+G+SRARVQSSIRSGL
Sbjct: 38  DSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGL 97

Query: 300 VSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVV 479
           VSVNGRV +K SHMV+ GD VDCTIA+L+PLRAEPEDIPLDIVYEDE+V+VVNKPAHMVV
Sbjct: 98  VSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVV 157

Query: 480 HPAPGNATGTLVNGILHHCRLSTVCF-SPDSLPETDDDSGDEISALSLDQGHDGGIGFGL 656
           HPAPGNATGTLV+GILHHC L TV F   + L + +D S DE++  S ++  +      +
Sbjct: 158 HPAPGNATGTLVSGILHHCSLPTVSFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVM 217

Query: 657 SEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGR 836
            E+SVRPGIVHRLDKGTSGLLVVAK+E S + L+EQFKK TIKRVY+S+TCGVP  ++GR
Sbjct: 218 CESSVRPGIVHRLDKGTSGLLVVAKNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGR 277

Query: 837 V 839
           V
Sbjct: 278 V 278


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Solanum tuberosum]
          Length = 431

 Score =  316 bits (810), Expect = 6e-84
 Identities = 161/241 (66%), Positives = 196/241 (81%), Gaps = 1/241 (0%)
 Frame = +3

Query: 120 NSASDGFNESSSGRPNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGL 299
           +S SD   +   GR +NYSGVK+EE V+   GKLRLDSW++SRI+G+SRARVQSSIRSGL
Sbjct: 38  DSDSDDSPDEIPGRRSNYSGVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGL 97

Query: 300 VSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVV 479
           VSVNGRV +K SHMV+ GD VDCTIA+L+PLRAEPEDIPLDIV+EDE+V+VVNKPAHMVV
Sbjct: 98  VSVNGRVTDKVSHMVKGGDKVDCTIADLKPLRAEPEDIPLDIVFEDEHVLVVNKPAHMVV 157

Query: 480 HPAPGNATGTLVNGILHHCRLSTVCF-SPDSLPETDDDSGDEISALSLDQGHDGGIGFGL 656
           HPAPGNATGTLV+GILHHC L T+ F   + L + +D S DE++  S ++  +      +
Sbjct: 158 HPAPGNATGTLVSGILHHCSLPTISFLGEEVLSDAEDASDDELNVFSGNRSPNYDDSSVM 217

Query: 657 SEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGR 836
            E+SVRPGIVHRLDKGTSGLLVVAK+E S + L+EQFKK TIKRVY+S+TCGVP  ++GR
Sbjct: 218 CESSVRPGIVHRLDKGTSGLLVVAKNENSLASLAEQFKKHTIKRVYVSITCGVPASVAGR 277

Query: 837 V 839
           V
Sbjct: 278 V 278


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  316 bits (810), Expect = 6e-84
 Identities = 176/286 (61%), Positives = 209/286 (73%), Gaps = 7/286 (2%)
 Frame = +3

Query: 3   SLQSLSWSSV----KPLLINPRSPYLRPLTATTHAYANSIPAANSASDGFNESSSGRPNN 170
           SL S S+ S+    +  L+ PR+P       +       + A ++++D    S SGR  N
Sbjct: 4   SLNSASFFSISHTSQSALLFPRNP------KSCSRVFRILRACSNSTDEPLVSVSGRRTN 57

Query: 171 YSGVKIEEKV---ELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHM 341
           Y+GV++EE V     D GKLRLDSWI+SRI GISRARVQSSIRSGLVSVN R+++K SH+
Sbjct: 58  YAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHV 117

Query: 342 VRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNG 521
           +R GD V+CTI+ELQPLRAEPEDIPLDIVYEDE+V+VVNKPAHMVVHPAPGNA+GTLVNG
Sbjct: 118 IRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNG 177

Query: 522 ILHHCRLSTVCFSPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDK 701
           ILHHC L TV   P+   E DD S DE ++ +       G   G  E ++RPGIVHRLDK
Sbjct: 178 ILHHCSLPTVAL-PNRDSEEDDISDDEFNSFA------AGQNCGTCETNIRPGIVHRLDK 230

Query: 702 GTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
           GTSGLLVVAKDE SH+HLSEQFK  +I RVYISLT GVP PLSGRV
Sbjct: 231 GTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRV 276


>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
           gi|222843675|gb|EEE81222.1| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 444

 Score =  315 bits (806), Expect = 2e-83
 Identities = 172/279 (61%), Positives = 203/279 (72%)
 Frame = +3

Query: 3   SLQSLSWSSVKPLLINPRSPYLRPLTATTHAYANSIPAANSASDGFNESSSGRPNNYSGV 182
           S+ S+S  S     ++ +    R LT   H+ +   P +N         + G+  NYSGV
Sbjct: 32  SISSVSRCSAPSFFLSQKPTASRLLTV--HSSSTREPNSNQ--------NPGQRINYSGV 81

Query: 183 KIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMV 362
           K+EE V+   GK RLDSWI+SRI+GISRARVQSSI+SGLVSVNG+VI+K SH V+ GD V
Sbjct: 82  KLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAGDKV 141

Query: 363 DCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRL 542
           +C I+ELQPLRAEPE+IPLDIVYEDENV+VVNKPAHMVVHPAPGNATGTLVNGILHHC L
Sbjct: 142 NCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSL 201

Query: 543 STVCFSPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSGLLV 722
            TV  S + L   +D S D+          D G+      ASVRPGIVHRLDKGTSGLLV
Sbjct: 202 PTVS-SQEVLSGAEDVSDDD----------DEGLCSSSYAASVRPGIVHRLDKGTSGLLV 250

Query: 723 VAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
           VAKDE SH+HLSEQFK  TIKRVY+SLTCGVP P++GR+
Sbjct: 251 VAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRI 289


>ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508723228|gb|EOY15125.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  311 bits (796), Expect = 3e-82
 Identities = 170/270 (62%), Positives = 203/270 (75%), Gaps = 3/270 (1%)
 Frame = +3

Query: 39  LLINPRSPYLRPLTATTHAYANSIPAANSASDGFNESSSGRPNNYSGVKIEEKVE-LDCG 215
           + ++PR P L P T +    A + P++  A+    ++      +Y+GV++EE V+    G
Sbjct: 23  VFLSPRYPKLLPFTLSGILRARARPSSGCAA----KTQEPIRTSYTGVQLEETVDGTKQG 78

Query: 216 KLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLR 395
           KLRLDSWI+SRI GISRARVQSSI+SGLV+VNGRV++K SH +R GD V+C I+ELQPLR
Sbjct: 79  KLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHGLRHGDKVNCVISELQPLR 138

Query: 396 AEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFS-PDSL 572
           AEPEDIPLDIVYED++V+VVNKP HMVVHPAPGNATGTLVNGILHHC L TV  S  + L
Sbjct: 139 AEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVNGILHHCSLPTVALSEKEVL 198

Query: 573 PETDDDSGDEISALSLDQGHDGGIGFGLS-EASVRPGIVHRLDKGTSGLLVVAKDEQSHS 749
            +T+D S D           D G  +G S  ASVRPGIVHRLDKGTSGLLVVAKDE SHS
Sbjct: 199 SDTEDVSDD-----------DEGFCYGASAAASVRPGIVHRLDKGTSGLLVVAKDEHSHS 247

Query: 750 HLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
           HLSEQFK+ TI+RVYISLTCGVP P +GRV
Sbjct: 248 HLSEQFKQHTIQRVYISLTCGVPSPSAGRV 277


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  308 bits (788), Expect = 2e-81
 Identities = 158/247 (63%), Positives = 192/247 (77%)
 Frame = +3

Query: 99  ANSIPAANSASDGFNESSSGRPNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQ 278
           +N     +S  D ++E+ S R  NY+G ++EE V+++ GK+RLDSWI+ RINGISRARVQ
Sbjct: 37  SNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQ 96

Query: 279 SSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVN 458
           SSIR+GLVSVNGRVI+K SH V+ GD+++CTI+ELQPLRAEPEDI LDIVYEDE+V+VVN
Sbjct: 97  SSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVN 156

Query: 459 KPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFSPDSLPETDDDSGDEISALSLDQGHDG 638
           KPAHMVVHPAPGNATGTLVN IL+HC L  V  S        D S DE S++        
Sbjct: 157 KPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSI-------- 208

Query: 639 GIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVP 818
           G+   +SEA +RPGIVHRLDKGTSGLLVVAKDE SH+HLS QFK+ +I+RVYISLTCGVP
Sbjct: 209 GVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP 268

Query: 819 GPLSGRV 839
              +GR+
Sbjct: 269 PSTAGRI 275


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  308 bits (788), Expect = 2e-81
 Identities = 158/247 (63%), Positives = 192/247 (77%)
 Frame = +3

Query: 99  ANSIPAANSASDGFNESSSGRPNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQ 278
           +N     +S  D ++E+ S R  NY+G ++EE V+++ GK+RLDSWI+ RINGISRARVQ
Sbjct: 37  SNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQ 96

Query: 279 SSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVN 458
           SSIR+GLVSVNGRVI+K SH V+ GD+++CTI+ELQPLRAEPEDI LDIVYEDE+V+VVN
Sbjct: 97  SSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVN 156

Query: 459 KPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFSPDSLPETDDDSGDEISALSLDQGHDG 638
           KPAHMVVHPAPGNATGTLVN IL+HC L  V  S        D S DE S++        
Sbjct: 157 KPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSI-------- 208

Query: 639 GIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVP 818
           G+   +SEA +RPGIVHRLDKGTSGLLVVAKDE SH+HLS QFK+ +I+RVYISLTCGVP
Sbjct: 209 GVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP 268

Query: 819 GPLSGRV 839
              +GR+
Sbjct: 269 PSTAGRI 275


>ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
           gi|561009207|gb|ESW08114.1| hypothetical protein
           PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 447

 Score =  306 bits (783), Expect = 8e-81
 Identities = 163/263 (61%), Positives = 197/263 (74%), Gaps = 2/263 (0%)
 Frame = +3

Query: 57  SPYLRPLTATTHAYANSIPAANSASDGFNESSSGRPNNYSGVKIEEKVELDCG--KLRLD 230
           SP    L AT++ + ++I +A S   G ++S   R  N+SG+++EE V+   G  KLRLD
Sbjct: 25  SPSSLFLYATSYKFRSTIASACSGFTGDSDSDGERKLNFSGLRLEEAVDSRIGSAKLRLD 84

Query: 231 SWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPED 410
           SWI+SRINGISRARVQSSI+SGLV VNGRV++KAS  V+ GD + CTIAELQ LRA PE+
Sbjct: 85  SWISSRINGISRARVQSSIKSGLVHVNGRVVDKASFNVKAGDQIKCTIAELQKLRAVPEN 144

Query: 411 IPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFSPDSLPETDDD 590
           IPLDIVYEDE+V+V+NKPAHMVVHPAPGN +GTLVNGILHHC L  V FS +      +D
Sbjct: 145 IPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEGLSDTED 204

Query: 591 SGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFK 770
             DE+++         G     S +S+RPGIVHRLDKGTSGLLVVAKDE SH  LSEQFK
Sbjct: 205 CDDEVNSYGSLASSCEGSHSRPSMSSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFK 264

Query: 771 KRTIKRVYISLTCGVPGPLSGRV 839
           +RTIKRVY+SLT GVP P+SGRV
Sbjct: 265 QRTIKRVYVSLTAGVPRPISGRV 287


>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537377|gb|ESR48495.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 341

 Score =  305 bits (780), Expect = 2e-80
 Identities = 162/239 (67%), Positives = 189/239 (79%), Gaps = 6/239 (2%)
 Frame = +3

Query: 141 NESSSGRPN-----NYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVS 305
           + SSSG  N     NY+GV++EE V+   GKLRLD+WI+SRI+GISRARVQSSIRSGLVS
Sbjct: 40  SSSSSGGNNREPIANYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVS 99

Query: 306 VNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHP 485
           VNG+V++K SH V+ GDMV+CTI+ELQPLRAE EDIPLDIVYED+NV+VVNKPAHMVVHP
Sbjct: 100 VNGQVVSKVSHNVKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHP 159

Query: 486 APGNATGTLVNGILHHCRLSTVCFS-PDSLPETDDDSGDEISALSLDQGHDGGIGFGLSE 662
           APGNATGTLVNGILHHC L T+  S  ++  + +D S DE  + S            +S 
Sbjct: 160 APGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDISDDEEFSSS------------ISG 207

Query: 663 ASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
           AS+RPGIVHRLDKGTSGLLVVAKDE SH+HLSEQFK  TI+RVYISLT GVP   SGR+
Sbjct: 208 ASIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRI 266


>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537376|gb|ESR48494.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 324

 Score =  305 bits (780), Expect = 2e-80
 Identities = 162/239 (67%), Positives = 189/239 (79%), Gaps = 6/239 (2%)
 Frame = +3

Query: 141 NESSSGRPN-----NYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVS 305
           + SSSG  N     NY+GV++EE V+   GKLRLD+WI+SRI+GISRARVQSSIRSGLVS
Sbjct: 40  SSSSSGGNNREPIANYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVS 99

Query: 306 VNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHP 485
           VNG+V++K SH V+ GDMV+CTI+ELQPLRAE EDIPLDIVYED+NV+VVNKPAHMVVHP
Sbjct: 100 VNGQVVSKVSHNVKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHP 159

Query: 486 APGNATGTLVNGILHHCRLSTVCFS-PDSLPETDDDSGDEISALSLDQGHDGGIGFGLSE 662
           APGNATGTLVNGILHHC L T+  S  ++  + +D S DE  + S            +S 
Sbjct: 160 APGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDISDDEEFSSS------------ISG 207

Query: 663 ASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
           AS+RPGIVHRLDKGTSGLLVVAKDE SH+HLSEQFK  TI+RVYISLT GVP   SGR+
Sbjct: 208 ASIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRI 266


>gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]
          Length = 1063

 Score =  305 bits (780), Expect = 2e-80
 Identities = 167/279 (59%), Positives = 206/279 (73%), Gaps = 2/279 (0%)
 Frame = +3

Query: 3   SLQSLSWSSVKPL-LINPRSPYLRPLTATTHAYANSIPAANSASDGFNESSSGRPNNYSG 179
           SLQ   W S KP  +I+ R+  L          +NS+  A S SD  + + SG+   +S 
Sbjct: 4   SLQGRCWRSAKPRRVISRRNLCLLKFVTVACPRSNSLQNATSDSDSDDCAFSGQSAGHSR 63

Query: 180 VKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDM 359
           ++IEE V L+  K+RLDSWI+SRI GISRARVQSSIRSG VSVNG V+NK S++VR GD+
Sbjct: 64  LRIEEAVCLESEKVRLDSWISSRIGGISRARVQSSIRSGFVSVNGSVVNKVSYLVRHGDV 123

Query: 360 VDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCR 539
           V+C++ EL+PLRAEPEDIPLDIV+EDE+++V+NKP HMVVHPAPGNA GTLVNGIL HC+
Sbjct: 124 VNCSVPELRPLRAEPEDIPLDIVHEDEHILVLNKPPHMVVHPAPGNANGTLVNGILGHCQ 183

Query: 540 L-STVCFSPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSGL 716
           L  +  FSPD   E ++DS D     SLD  H GG  F    A VRPGIVHRLDKGTSGL
Sbjct: 184 LPPSSSFSPD--VEIEEDSSDGSCIDSLDH-HTGGRFFA---ADVRPGIVHRLDKGTSGL 237

Query: 717 LVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSG 833
           LVVAKDE SHSHL+EQF+K T+KR+Y+S++CGVP P +G
Sbjct: 238 LVVAKDEYSHSHLAEQFQKHTVKRLYMSISCGVPSPSTG 276


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score =  304 bits (779), Expect = 2e-80
 Identities = 161/239 (67%), Positives = 189/239 (79%), Gaps = 6/239 (2%)
 Frame = +3

Query: 141 NESSSGRPN-----NYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLVS 305
           + SSSG  N     NY+GV++EE V+   GKLRLD+WI+SRI+GISRARVQSSIRSGLVS
Sbjct: 40  SSSSSGGNNREPIANYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVS 99

Query: 306 VNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHP 485
           +NG+V++K SH V+ GDMV+CTI+ELQPLRAE EDIPLDIVYED+NV+VVNKPAHMVVHP
Sbjct: 100 INGQVVSKVSHNVKGGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHP 159

Query: 486 APGNATGTLVNGILHHCRLSTVCFS-PDSLPETDDDSGDEISALSLDQGHDGGIGFGLSE 662
           APGNATGTLVNGILHHC L T+  S  ++  + +D S DE  + S            +S 
Sbjct: 160 APGNATGTLVNGILHHCSLPTLASSNQEAFSDAEDISDDEEFSSS------------ISG 207

Query: 663 ASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
           AS+RPGIVHRLDKGTSGLLVVAKDE SH+HLSEQFK  TI+RVYISLT GVP   SGR+
Sbjct: 208 ASIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRI 266


>ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer
           arietinum]
          Length = 438

 Score =  303 bits (776), Expect = 5e-80
 Identities = 157/236 (66%), Positives = 187/236 (79%), Gaps = 3/236 (1%)
 Frame = +3

Query: 141 NESSSGRP-NNYSGVKIEEKV--ELDCGKLRLDSWIASRINGISRARVQSSIRSGLVSVN 311
           + +S+G P +NY+GV++EE V  E+  GKLRLD+WI+SRINGISRARVQSSI++GLV VN
Sbjct: 53  DSNSNGEPKSNYAGVRLEEIVDGEIKSGKLRLDTWISSRINGISRARVQSSIKAGLVHVN 112

Query: 312 GRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAP 491
           GR+++K S  VR GD + CTIAELQ LRA PE+IPLDIVYEDE+++V+NKPAHMVVHPAP
Sbjct: 113 GRLVDKVSFNVRAGDEIKCTIAELQKLRAVPENIPLDIVYEDEHLLVINKPAHMVVHPAP 172

Query: 492 GNATGTLVNGILHHCRLSTVCFSPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASV 671
           GN +GTLVNGILHHC L  V FS D      +DS DE++  +       G+   LS AS+
Sbjct: 173 GNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDELNGFTSQAPSCEGLDSRLSIASI 232

Query: 672 RPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
           RPGIVHRLDKGTSGLLVVAKDE SH  LSEQFK RTIKRVYISLT GVP P++GRV
Sbjct: 233 RPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYISLTAGVPTPVAGRV 288


>ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
           X1 [Glycine max] gi|571448797|ref|XP_006577958.1|
           PREDICTED: RNA pseudouridine synthase 2,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 450

 Score =  303 bits (776), Expect = 5e-80
 Identities = 160/259 (61%), Positives = 198/259 (76%), Gaps = 4/259 (1%)
 Frame = +3

Query: 75  LTATTHAYANSIPAANSASDGFNESSSGRPNNYSGVKIEEKVE--LDCGKLRLDSWIASR 248
           L+AT++ + ++  +A S S G ++S      N+SGV++EE V+  +  GKLRLD+WI+SR
Sbjct: 32  LSATSYKFRSATASAASGSAGDSDSDGEPKLNFSGVRLEEAVDSRIGSGKLRLDNWISSR 91

Query: 249 INGISRARVQSSIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIV 428
           INGISRARVQSSI+SGLV VNGRV++K S  V+ GD + CTIAELQ LRA P++IPLDIV
Sbjct: 92  INGISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQNLRAVPQNIPLDIV 151

Query: 429 YEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFSPDSLPETDDDSGDEI- 605
           YEDE+V+V+NKPAHMVVHPAPGN +GTLVNGILHHC L  V FS D      +DS DE  
Sbjct: 152 YEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDEFN 211

Query: 606 SALSLDQGHDG-GIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTI 782
           S +SL    +G      ++  S+RPGIVHRLDKGTSGLLVVAKDE SH  LSEQFK+RTI
Sbjct: 212 SYISLASSCEGLNSRLSVASNSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRTI 271

Query: 783 KRVYISLTCGVPGPLSGRV 839
           KR+Y+SLT GVP P++GRV
Sbjct: 272 KRLYVSLTAGVPTPVAGRV 290


>ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Oryza
           brachyantha]
          Length = 442

 Score =  298 bits (764), Expect = 1e-78
 Identities = 151/242 (62%), Positives = 187/242 (77%), Gaps = 4/242 (1%)
 Frame = +3

Query: 126 ASDGFNESSSGRPNNYSGVKIEEKVELDCGKLRLDSWIASRING--ISRARVQSSIRSGL 299
           +SD   E++S R   + G ++EE V    G+ R+D+WI+SR+ G  +SRARVQ+SIR+GL
Sbjct: 39  SSDANAEAASSRRGGHGGTRLEEAVPAGEGRSRIDAWISSRLGGGGVSRARVQASIRAGL 98

Query: 300 VSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVV 479
           V+VNGR ++K SHMV+ GDMV CT++ELQPLRAEPEDIPLDIVYED++++VVNKPAHMVV
Sbjct: 99  VAVNGRPVSKVSHMVKGGDMVSCTVSELQPLRAEPEDIPLDIVYEDQHLLVVNKPAHMVV 158

Query: 480 HPAPGNATGTLVNGILHHCRLST-VCFSPDSL-PETDDDSGDEISALSLDQGHDGGIGFG 653
           HPAPGNA GTLVN ILHHC++ST  C + +S   E  D S D+I    +DQ   G +   
Sbjct: 159 HPAPGNANGTLVNAILHHCKISTFTCLARNSTDDECPDSSDDDIDVFHVDQFTTGEVSSE 218

Query: 654 LSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSG 833
           + EA VRPGIVHRLDKGTSGLLVVAKDE SH+ L+EQFK  TI+RVYISLTCG P P SG
Sbjct: 219 VREALVRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSG 278

Query: 834 RV 839
           R+
Sbjct: 279 RI 280


>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
          Length = 369

 Score =  298 bits (763), Expect = 2e-78
 Identities = 153/240 (63%), Positives = 185/240 (77%), Gaps = 1/240 (0%)
 Frame = +3

Query: 123 SASDGFNESSSGRPNNYSGVKIEEKVELDCGKLRLDSWIASRINGISRARVQSSIRSGLV 302
           S SD   E  +G   N++GV++E  V +D GK+RLDSWI+SR++GISRARVQSSIR GLV
Sbjct: 59  SISDRNEEVLAGVRPNFAGVRLEATVAVDSGKVRLDSWISSRVSGISRARVQSSIRLGLV 118

Query: 303 SVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVH 482
            VNG+V++K S  V+ GD +DCTI+ELQPL+AE EDIPL+IV+ED++V+VVNKP HMVVH
Sbjct: 119 RVNGQVVDKVSQNVKTGDKIDCTISELQPLKAEAEDIPLEIVHEDDSVLVVNKPPHMVVH 178

Query: 483 PAPGNATGTLVNGILHHCRLSTVCFS-PDSLPETDDDSGDEISALSLDQGHDGGIGFGLS 659
           PAPGNA GTLVNGILHHC L T+ FS  +SL + +D   DE   +S+D          +S
Sbjct: 179 PAPGNAKGTLVNGILHHCSLPTIAFSHQESLSDDEDTCDDEFRGMSMDA--------SIS 230

Query: 660 EASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
            ASVRPGIVHRLDKGTSGLLVVAKDE SH+HLSEQFK  TI RVY+SLT GVP  LSG +
Sbjct: 231 GASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIHRVYVSLTSGVPSQLSGHI 290


>ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
           gi|561009206|gb|ESW08113.1| hypothetical protein
           PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 458

 Score =  297 bits (761), Expect = 3e-78
 Identities = 163/274 (59%), Positives = 197/274 (71%), Gaps = 13/274 (4%)
 Frame = +3

Query: 57  SPYLRPLTATTHAYANSIPAANSASDGFNESSSGRPNNYSGVKIEEKVELDCG--KLRLD 230
           SP    L AT++ + ++I +A S   G ++S   R  N+SG+++EE V+   G  KLRLD
Sbjct: 25  SPSSLFLYATSYKFRSTIASACSGFTGDSDSDGERKLNFSGLRLEEAVDSRIGSAKLRLD 84

Query: 231 SWIASRINGISRARVQSSIRSGLVSVNGRVINK-----------ASHMVRLGDMVDCTIA 377
           SWI+SRINGISRARVQSSI+SGLV VNGRV++K           AS  V+ GD + CTIA
Sbjct: 85  SWISSRINGISRARVQSSIKSGLVHVNGRVVDKKSKHQPEQYALASFNVKAGDQIKCTIA 144

Query: 378 ELQPLRAEPEDIPLDIVYEDENVIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCF 557
           ELQ LRA PE+IPLDIVYEDE+V+V+NKPAHMVVHPAPGN +GTLVNGILHHC L  V F
Sbjct: 145 ELQKLRAVPENIPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEF 204

Query: 558 SPDSLPETDDDSGDEISALSLDQGHDGGIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDE 737
           S +      +D  DE+++         G     S +S+RPGIVHRLDKGTSGLLVVAKDE
Sbjct: 205 SKEEGLSDTEDCDDEVNSYGSLASSCEGSHSRPSMSSIRPGIVHRLDKGTSGLLVVAKDE 264

Query: 738 QSHSHLSEQFKKRTIKRVYISLTCGVPGPLSGRV 839
            SH  LSEQFK+RTIKRVY+SLT GVP P+SGRV
Sbjct: 265 HSHMKLSEQFKQRTIKRVYVSLTAGVPRPISGRV 298


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score =  294 bits (752), Expect = 3e-77
 Identities = 156/247 (63%), Positives = 185/247 (74%), Gaps = 4/247 (1%)
 Frame = +3

Query: 111 PAANSASDGFNESSSGRPNNYSGVKIEEKVEL---DCGKLRLDSWIASRINGISRARVQS 281
           P   S S  F   S     NY G+++EE V++      KLRLDSWI+SRI+GISRARVQS
Sbjct: 33  PCNISLSRIFTIRSCQNHTNYGGIRLEETVQVVHAKSVKLRLDSWISSRISGISRARVQS 92

Query: 282 SIRSGLVSVNGRVINKASHMVRLGDMVDCTIAELQPLRAEPEDIPLDIVYEDENVIVVNK 461
           SI+SGLVSVNGRV++K SH V+ GD V CTI+ELQPLRAEPED+PLDIVYEDE+++VVNK
Sbjct: 93  SIKSGLVSVNGRVVDKVSHNVKFGDKVTCTISELQPLRAEPEDMPLDIVYEDEHLLVVNK 152

Query: 462 PAHMVVHPAPGNATGTLVNGILHHCRLSTVCF-SPDSLPETDDDSGDEISALSLDQGHDG 638
           P HMVVHPAPGN TGTLVNGILHHC L TV   S + L + +D S D+  + S       
Sbjct: 153 PPHMVVHPAPGNPTGTLVNGILHHCNLPTVAISSQEVLSDAEDRSDDDERSYS------- 205

Query: 639 GIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEQSHSHLSEQFKKRTIKRVYISLTCGVP 818
                  E+S+RPGIVHRLDKGTSGLLVVAKDE +H+HLSEQFK+ TI+RVYISLT GVP
Sbjct: 206 ----SSCESSIRPGIVHRLDKGTSGLLVVAKDEHAHAHLSEQFKQHTIQRVYISLTSGVP 261

Query: 819 GPLSGRV 839
             L+GR+
Sbjct: 262 SALTGRI 268